mRNA_P-littoralis_Contig677.12.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig677.12.1 vs. uniprot
Match: A0A6H5KSF8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSF8_9PHAE) HSP 1 Score: 875 bits (2261), Expect = 9.810e-267 Identity = 628/1287 (48.80%), Postives = 764/1287 (59.36%), Query Frame = 1
Query: 2716 LQSSVPTTSPGPDSGRGFKEDNTVSPTTGATISPSPYFSSASSSPTTTSDRLSFDQLPTGPPTPAPTLT--QTNTPHSPAIRGDNDDDLGQGGAPTTEPTGFAFGGGTEETRPPSGMYLTQMPTA---SPDGQEPGEGGVGGDEESDDSDGEGSFGTSAPTWAPSP-------YDPGNSGDTGLALGTPAPTNHEEDLWTWWFQTGGPRTDRAQALAIGSGGNTDRRFLVGTEDGVVSTGTSAAAASKDPWXXXXXXXXRMQSSTVSGQDVSVVCLDSDGLDLWHKNMGSTGEDVALCSGTSVDHVAIAGFTTGDLYADNSGEDDAFLGLLDVTNGDVLAGWQFGGAGSERIYALGLDDESGDVIVGGYTTGSLFATNDDANSQFFVARLNKEDLLLSSGLLDVFDDSHGVVVWGWQYSLSSTAPEAIVSLHVDSSNGIVTTLGARGLPPGSNPRDADFSPDDGAEVVSLVLSLGLATGELLRTSDELEGLGTAVAIDGDTGDAFVAGFTSPSASGVDSNGNDTIVVHKLTASTGGTAWSYVATSDGVFAGRALAIDLFGDYD--VIVAGTTSGNAAHPSSGANDIFMLLLDNEDASETCYYQVGTESNDVVTGLSVDNSGAATYPDTAVGGYTEGSLAGSNAGGADIFAIGVDFASFCPGVPRSSAAAEAETLGSFAADAVSILAGFAIVGAVISTAIAPXXXXXXXXXXXXXXXXXXXX--------TTTAPMMTGAVSGDAATSXXATACPES-AAGAGALVTILSASCSYLARHGIGALASKPPPPGGVTFRSPSASIGLLVMTQLQFSALLSLVPSVHESTSILASFVKNLRWVNLWLPMPTSMTPDSCKVEDPDVLMDDGVFFGNTLLVFGALLGIFLVHVATISAVEAYWLAQDRATAALTSARKLYGMSAADLERKPGSGSSRRGRGRFAAVEHVASSDGRGLSPER-PLDDLISFGDASGGRLGSPSS-APASSVGSSRSLSPPSALVNSRLN-EPSSPTSGYADDHQSQYQETSNPSFPGSPPAHRQDDGSSL----QSGRLGNRANVSNGD-WSPNGRLTSPPP-----GPGGSPQRLAKGIISPAEPSSIMRRISDKGGVSLPGSPTRGGRRYGRTDELYPHQSAVSSVRSASPTSIYWDSPTRGFTGTVATCRQVKAAH----DRDGSGGQHRDGGGRVGSD--GFIDLHQIDTLMSGPAAAVAAGGAGARGTPALRQQTALVISESGSVFDDGMVLHSGAAXXXXXXNFGDGG-GLRRRRGEKAGNVSETTQT 6447
L S PT + RGF E NT SPT+ SP SS +++ + + DQ TG PT +P +T P SP +D+D G T PT + G + ++ T MPTA S E GE G+G D SDGE + +P+ AP+P D G TPAPT+H+EDLW+WWFQTGG R DR AL G GGN RR+LVG EDGVV++ + A+A GS ED+ALC+ VAIAG+TTG LY+D++G DDAFL LLD GD L GWQFGG GSER+YALGLD +SGDV+VGG+TT SLFATNDDA SQ+F+ARL+ LLLS G LD+ D VVVWGWQYS S+ EAIVSL V+ G+VT LG RGLP +PRD DF P+D E+ S V SL L TG+L R S E EGL AVA+D T DA+VA FT + + ND +VV+K+ S GG WSY ATS+GVF GRALAID GD D VIVAGTT G +AH S G+ D F+LLL ++ SE CYYQ GT DVVTG++VD+S A Y D +GGYTEGSLAG NAG D+FAIGV AS CP V RS+++A AE GSFAA +SILAG A+ GAV+ST +AP XXXXXXXXXXXXXX TTTA + CP++ AAG GALVTILSA HG G L P PG +FRSPSASIGLL+MTQLQF A LSLV SVH+S S L+SFV+NLRWVNLWLPMP+S++P+SC++ D L+D+GVFFGNT LV LLGIFL+HV +SAVEAYWLAQDRA AAL SAR++Y MSAADL+R+ S GRGRF+AV + S+ G P R PLDDLISFGD PSS APASSVGS R +SP L+ N P+S TSG AD S + SN + S P +R + +S Q GR+ + +GD WS SP G SP A ++P SS+ +R SDKGG SLPGSPTR G RYGRT +LYP+QSAVSSVRSASP S+ WDSPTR FTG A R + H D GSG ++D G G G + + + + AA V A GTP+L+Q++A VIS+SGS F D MV +S + G GG G+RR R + +++T
Sbjct: 1105 LLSFAPTLASSSPGNRGF-EFNTASPTS------SPSVSSTATASESGWSYIEQDQRTTGFPTTSPXXXXGKTAAPTSPVSTPRSDED----GVSTPTPTRVSGSGREDTPXXXPALFQTLMPTAPSSSSGTPEQGERGIGSD-----SDGERNE-IFSPSGAPTPSIASDGGLDREEGGIPTTPTATPAPTHHDEDLWSWWFQTGGQRRDRGHALVNGVGGNASRRYLVGAEDGVVASDSVASA-------------------------------------------GSAAEDIALCADAGEGWVAIAGYTTGSLYSDSAGGDDAFLVLLDPDTGDALGGWQFGGEGSERVYALGLDQDSGDVVVGGFTTSSLFATNDDAVSQYFLARLDTGKLLLSPGRLDLADAGSDVVVWGWQYSASADL-EAIVSLRVNPGTGVVTALGMRGLPADWSPRDTDFVPEDDDELHSSVFSLELETGDLFRNSTEEEGLAAAVAVDEGTDDAYVASFTRSA------DNNDRVVVYKVNVSNGGMMWSYQATSEGVFEGRALAIDTVGDSDEMVIVAGTTGGTSAHGSYGSTDAFVLLLGADNGSEICYYQAGTSFADVVTGITVDSSSTA-YSDVTLGGYTEGSLAGLNAGEVDMFAIGVRLASLCPDVSRSTSSA-AEIEGSFAAGTISILAGVAVAGAVVSTIVAPGAAVASXXXXXXXXXXXXXXXXXXXXXXTTTA-----------------STCPKAGAAGVGALVTILSAG------HGAGGLVGNTPTPGEASFRSPSASIGLLMMTQLQFLATLSLVQSVHDSASSLSSFVENLRWVNLWLPMPSSLSPNSCEIADAQDLIDEGVFFGNTTLVLAILLGIFLIHVGAVSAVEAYWLAQDRAAAALKSARQMYRMSAADLDRRV----SASGRGRFSAVANDPSNGTNGAPPRRGPLDDLISFGDLEEDARSRPSSPAPASSVGSPRCMSPGGRLIRHCPNGSPASRTSGCADGLPSGTERNSNGGW--SQPNNRAEWANSQEPMQQQGRVASIPRSHHGDEWSSTNESVSPTTKSLKDGTVWSPAGRAGRTLTPPGRSSLTKRCSDKGGGSLPGSPTRDGYRYGRTHQLYPNQSAVSSVRSASPRSLPWDSPTRDFTGAPAAYRVSRVTHRHEVDISGSGYSNQDRGSGGGEPLVGLLGMASVLSTSVDTAAGVVPEVMSA-GTPSLQQRSAAVISDSGSAFGDVMVAYSSVVVSKDGLDGGGGGDGVRRPRDDNCAGDKNSSET 2292
BLAST of mRNA_P-littoralis_Contig677.12.1 vs. uniprot
Match: D7G8U8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8U8_ECTSI) HSP 1 Score: 839 bits (2167), Expect = 2.700e-255 Identity = 579/1269 (45.63%), Postives = 681/1269 (53.66%), Query Frame = 1
Query: 2986 GAPTTEPTGFAFGGGTEETRPPSG-MYLTQMPTA---SPDGQEPGEGGVGGDEESDDSDGEGSFGTSAPTWAPSPY---DPGNSGDTG----LALGTPAPTNHEEDLWTWWFQTGGPRTDRAQALAIGSGGNTDRRFLVGTEDGVVSTGTSAAAASKDPWXXXXXXXXRMQSSTVSGQDVSVVCLDSDGLDLWHKNMGSTGEDVALCSGTSVDHVAIAGFTTGDLYADNSGEDDAFLGLLDVTNGDVLAGWQFGGAGSERIYALGLDDESGDVIVGGYTTGSLFATNDDANSQFFVARLNKEDLLLSSGLLDVFDDSHGVVVWGWQYSLSSTAPEAIVSLHVDSSNGIVTTLGARGLPPGSNPRDADFSPDDGAEVVSLVLSLGLATGELLRTSDELEGLGTAVAIDGDTGDAFVAGFTSPSASGVDSNGNDTIVVHKLTASTGGTAWSYVATSDGVFAGRALAIDLFGDYD--VIVAGTTSGNAAHPSSGANDIFMLLLDNEDASETCYYQVGTESNDVVTGLSVDNSGAATYPDTAVGGYTEGSLAGSNAGGADIFAIGVDFASFCPGVPRS-SAAAEAETLGSFAADAVSILAGFAIVGAVISTAIAPXXXXXXXXXXXXXXXXXXXXTTTAPMMTGAVSGDAATSXXATACPESAAGAGALVTILSASCSYLARHGIGALASKPPPPGGVTFRSPSASIGLLVMTQLQFSALLSLVPSVHESTSILASFVKNLRWVNLWLPMPTSMTPDSCKVEDPDVLMDDGVFFGNTLLVFGALLGIFLVHVATISAVEAYWLAQDRATAALTSARKLYGMSAADLERKPGSGSSRRGRGRFAAVEHVASSDGRGLSPERPLDDLISFGDASGGRLGSPSSAPASSVGSSRSLSPPSALVNSRLN-EPSSPTSGYADDHQSQYQETSNPSFPGSPPAHRQDDGSSL----QSGRLGNRANVSNGD-WSPNGRLTSPPP-----GPGGSPQRLAKGIISPAEPSSIMRRISDKGGVSLPGSPTRGGRRYGRTDELYPHQSAVSSVRSASPTSIYWDSPTRGFTGTVATCRQVKAAH----DRDGSGGQHRD---GGGRVGSDGFIDLHQIDTLMSGP---AAAVAAGGAGARGTPALRQQTALVISESGSVFDDGMVLHSGAAXXXXXXNFGDGG-GLRRRRGEKA---GNVSETTQTGESAAKELPREPD----SNLNPILACRRRSCSMWLHFPHLELLFLFWAFEGAVAAQISALKNAECPGVFWLALAAL 6663
G T PT + GG EET PPS ++LT +PTA S E GE G+G D +DGEG+ T +P+ AP+ D G D G TPAPT+H E+LW+WWFQTGG R DR AL G GGN LWH GS ED+ALC+ VAIAG+TTG LY+D++G DDAFL LLD GD L GWQFGG GSER+YALGLD +SGDV+VGG+TT SLFATNDDA SQ+FVARL+ LLLS G LD+ D+ VVVWGWQYS S T PEAIVSL V+S G+VT LG RGLP PRD DF P+D AE+ S V SLGL TG+L R+S E EGL AVA+D DT ++VA FT + + D +VV+K+ S+G T WSY ATS+GVF GRALAID GD D VIVAGTT G +AH S G+ D F+L+L +D SE CYYQ GT DVVTG+SVD+S A Y +GGYTEGSLAG NAGGAD+FAIGV AS CP V S S+AAE E A HG G L P PG +FRSPSASIG L+M QLQF A LSLV SVH+S S L+SFV+NLRWVNLWLPMP+S+TPDSC++ D L+D+GVFFGNT LV LLGIFL+HV +SAVEAYWLAQ R +SP L+ R N P+S TSGYADD S + SN + S P +R + +S Q GR + NGD WS SP G SP A ++P PSS+++R SDKGG SLPGSPTR G RYGRTD+LYPHQSAVSSVRSASP S+ WDSPTR FTG A CR + H D GSG ++D GGG +DL + +++S AA VA GA GTP+ +Q++A VIS+SGS F D MV +S + G GG GLRRRRG+ GN SET + ES P + D +PILACRRRS SMWLHFPHLELLFLFWAFEGAVAAQ+SALKNAEC VFWLALAAL
Sbjct: 1097 GVSTPTPTRVSGSGG-EETPPPSAALFLTLVPTAPSSSSGTPEQGERGLGSD-----NDGEGNE-TFSPSGAPTTAIASDGGLDRDEGDMPTAPTATPAPTHHNEELWSWWFQTGGQRGDRGHALVNGVGGN-----------------------------------------------------------LWHATAGSAAEDIALCADAGEGWVAIAGYTTGSLYSDSTGGDDAFLVLLDPDTGDALGGWQFGGEGSERVYALGLDQDSGDVVVGGFTTSSLFATNDDAVSQYFVARLDMGKLLLSPGWLDLADEGSDVVVWGWQYSASPTDPEAIVSLRVNSGTGVVTALGTRGLPADWTPRDTDFVPEDDAELYSSVFSLGLETGDLFRSSTEEEGLAAAVAVDEDTDYSYVASFTRSA------DNYDRVVVYKVDVSSGNTMWSYQATSEGVFEGRALAIDTVGDSDGIVIVAGTTGGTSAHGSYGSTDAFVLILGADDGSEICYYQTGTSFADVVTGISVDSSSTA-YSQVTLGGYTEGSLAGLNAGGADMFAIGVRLASLCPDVSSSTSSAAEIE----------------------------------------------------------------------------------------------AGHGAGGLVGSTPAPGEASFRSPSASIGFLMMMQLQFLATLSLVQSVHDSASFLSSFVENLRWVNLWLPMPSSLTPDSCEIADAQDLIDEGVFFGNTTLVLAILLGIFLIHVGAVSAVEAYWLAQ-------------------------------------------------------------------------------------RCMSPGGGLIRHRPNGSPASRTSGYADDLPSGTERNSNGDW--SQPNNRAEWATSQEPMQQQGRAASIPRSHNGDEWSSINESVSPTTKSLKYGTAWSPAGRAGRTLTPPGPSSLVKRCSDKGGGSLPGSPTRDGYRYGRTDQLYPHQSAVSSVRSASPPSLPWDSPTRDFTGAPAACRVSRVTHRHELDISGSGYSNQDRRSGGGEP----IVDLLGMASVLSASVDTAAGVAPEEVGA-GTPSFQQRSAAVISDSGSTFGDAMVAYSSVGVSRDGLDGGGGGDGLRRRRGDNFAGDGNRSETPRLFESDMDAKPTDQDLDDHDGSDPILACRRRSRSMWLHFPHLELLFLFWAFEGAVAAQLSALKNAECAHVFWLALAAL 2106
BLAST of mRNA_P-littoralis_Contig677.12.1 vs. uniprot
Match: D7FWS4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FWS4_ECTSI) HSP 1 Score: 274 bits (701), Expect = 5.080e-70 Identity = 168/435 (38.62%), Postives = 241/435 (55.40%), Query Frame = 1
Query: 6469 LPREPDSNLNPILACRRRSCSMWLHFPHLELLFLFWAFEGAVAAQISALKNAECPGVFWLALAALLLFPVLMIAMVWRTISVRIHPNELLVFSLYASGDQENDEGGEQQQSARQADGGELSLTTRASETETGQELQHGVWEKFTKGWFEKGRLFSWADIGSWESVATHDEEIKREADWFRIGFEPLFVDLSKLGCFYLIFLLVKWFSLACVSVLVEDSVMQLMYMFILHAVDLTVLIRASPFANRVVNMMNAMLTAVDCASSALMLGDAGFDE--HETSRFNDIAFFLQLVALIALVIPVYIDTGVALTI-LGVEKLSQQCAARDDEADVTQTLDAEGMEEQQGREYVRRFARRSWPQFWFSMVRHNVHACVTDIREGIRAPG------SGQYRRYDRPPQVNKPGRAGTRTGRGWQVRICGAPCGVSSAPTLPV 7746
+P ++ L+P+ CR S S WLHFPH+EL+FLF+AFEGAVA+ SA++N+ECP +F+ A+AA++L+P+LM V+RT+ VR+ PN LL+F YA DG +RA G+ +F W E LFSWAD G WE+V T D ++ RE DWFRIGFEP+FVD +K G ++++ LV+W + A V V++E+SV+QL+ LH+V +L+ PFAN V+N + A +TA+D S + A + E + + N LQL++L ALVIPVY+D A+TI +G + + A ++T EE++ R Y+R + RR W W +M+RHNV AC D EG+R P SG Y DR Q GT G G R G ++ P + +
Sbjct: 1371 VPMRSENRLSPVATCREHSTSAWLHFPHVELVFLFFAFEGAVASFASAIRNSECPEIFYTAIAAMVLYPLLMFVTVFRTLLVRVRPNVLLIFKTYAE------------------DGTNGDAPSRAG----------GLLSRFKSSWAENYSLFSWADKGQWETVQTPDRQVSREGDWFRIGFEPVFVDYTKRGTWFIVISLVEWAAFAFVGVMIENSVVQLVLFCGLHSVMFFILMFLKPFANSVINNIEACVTAIDAISMGVFAASALWWEGTNRAAHLNTSVVVLQLLSLFALVIPVYLD---AVTIVMGAIRNRIRKALGKTGHELTD-------EEREARHYIRSYTRRQWCGTWCTMLRHNVFACARDTSEGVRKPRFTTAARSGPYPPLDRSKQAG-----GTEDGGGPPRRPSCNAVGTANTPVIVI 1762
BLAST of mRNA_P-littoralis_Contig677.12.1 vs. uniprot
Match: D8LLG6_ECTSI (Mucin-1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLG6_ECTSI) HSP 1 Score: 260 bits (664), Expect = 2.240e-65 Identity = 159/395 (40.25%), Postives = 226/395 (57.22%), Query Frame = 1
Query: 6430 SETTQTGESAAKELPREPDSNLNPILACRRRSCSMWLHFPHLELLFLFWAFEGAVAAQISALKNAECPGVFWLALAALLLFPVLMIAMVWRTISVRIHPNELLVFSLYASGDQENDEGGEQQQSARQADGGELSLTTRASETETGQELQHGVWEKFTKGWFEKGRLFSWADIGSWESVATHDEEIKREADWFRIGFEPLFVDLSKLGCFYLIFLLVKWFSLACVSVLVEDSVMQLMYMFILHAVDLTVLIRASPFANRVVNMMNAMLTAVDCASSALMLGDAGFDEHETSRFNDI---AFFLQLVALIALVIPVYIDTGVALTILGVEKLSQQCAARDDEADVTQTLDAEGMEEQQGREYVRRFARRSWPQFWFSMVRHNVHACVTDIREGIRAP 7605
S+ T E +P ++ L+P+ CR S S WLHFPH+EL+FLF+AFEGAVA+ SA++N+ECP +F+ A+AA++L+P+LM A V RT+ VR+ P+ELL+F Y D++ G +A GG LS F W E LFSWAD G WE+V T + I RE DWFRIGFEP+FVD +K G ++++ LV+W S+A V V++++S +QL+ L + +L+ PFAN V+N + A + A+D S+ L L A TSR D+ LQ+V+L ALVIPVY+D V + + + ++ + + Q L E E R+Y+R F RR W W +M+RHNV AC D REG+R P
Sbjct: 1539 SQRTDEEEGGRGLVPMCSENQLSPVATCREHSTSAWLHFPHVELVFLFFAFEGAVASFASAIRNSECPEMFYTAIAAMVLYPLLMFATVVRTLFVRVRPDELLIFKTY---DEDGTNG-----NAPNCRGGFLS--------------------HFKSSWAENYSLFSWADKGQWETVQTPNRNITREGDWFRIGFEPVFVDYTKRGTWFIVISLVEWASIALVGVMIDNSNVQLLLFCGLQSAMFLILVCLKPFANSVINGIGACIVAIDAVSTGL-LAVAALKWEGTSRATDVNSAVGVLQIVSLCALVIPVYLD-AVTIVMGAIRNRIRKALGKTGQ----QQLKGESPE---ARDYIRTFTRRQWCGTWCAMLRHNVFACARDTREGVRKP 1896
BLAST of mRNA_P-littoralis_Contig677.12.1 vs. uniprot
Match: A0A6H5JD90_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JD90_9PHAE) HSP 1 Score: 260 bits (664), Expect = 2.260e-65 Identity = 157/395 (39.75%), Postives = 226/395 (57.22%), Query Frame = 1
Query: 6430 SETTQTGESAAKELPREPDSNLNPILACRRRSCSMWLHFPHLELLFLFWAFEGAVAAQISALKNAECPGVFWLALAALLLFPVLMIAMVWRTISVRIHPNELLVFSLYASGDQENDEGGEQQQSARQADGGELSLTTRASETETGQELQHGVWEKFTKGWFEKGRLFSWADIGSWESVATHDEEIKREADWFRIGFEPLFVDLSKLGCFYLIFLLVKWFSLACVSVLVEDSVMQLMYMFILHAVDLTVLIRASPFANRVVNMMNAMLTAVDCASSALMLGDAGFDEHETSRFNDI---AFFLQLVALIALVIPVYIDTGVALTILGVEKLSQQCAARDDEADVTQTLDAEGMEEQQGREYVRRFARRSWPQFWFSMVRHNVHACVTDIREGIRAP 7605
S+ T E + +P ++ L+P+ CR S S WLHFPH+EL+FLF+AFEGAVA+ SA++N+ECP +F+ A+AA++L+P+LM A V RT+ VR+ P+ELL+F Y D++ G + GG LS +F W E LFSWAD G WE+V T + I RE DWFRIGFEP+FVD +K G ++++ LV+W S+A V V++++S +QL+ L + +L+ PFAN V+N + A + A+D + L L A TSR D+ LQ+V+L ALVIPVY+D V + + + K ++ + Q L E E R+Y+R F RR W W +M+RHNV AC D R+G+R P
Sbjct: 1580 SQRTDEEEGGRELVPMCSENRLSPVAMCREHSTSAWLHFPHVELVFLFFAFEGAVASFASAIRNSECPEMFYTAIAAMVLYPLLMFATVVRTLFVRVRPDELLIFKTY---DEDGTNG-----NTPNGRGGFLS--------------------RFKSSWAENYSLFSWADKGQWETVQTPNRNITREGDWFRIGFEPVFVDYTKRGTWFIVISLVEWASIALVGVMIDNSYVQLLLFCGLQSAMFLILVCLKPFANSVINGIGACIVAIDAVCTGL-LAVAALKWEGTSRATDVNSAVGVLQIVSLCALVIPVYLD-AVTIVMGAIRKRIRKALGK-----TGQQLTGESPE---ARDYIRTFTRRQWCGTWCAMLRHNVFACARDTRDGVRKP 1936
BLAST of mRNA_P-littoralis_Contig677.12.1 vs. uniprot
Match: D8LN93_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LN93_ECTSI) HSP 1 Score: 257 bits (657), Expect = 3.590e-65 Identity = 150/379 (39.58%), Postives = 212/379 (55.94%), Query Frame = 1
Query: 6484 DSNLNPILACRRRSCSMWLHFPHLELLFLFWAFEGAVAAQISALKNAECPGVFWLALAALLLFPVLMIAMVWRTISVRIHPNELLVFSLYASGDQENDEGGEQQQSARQADGGELSLTTRASETETGQELQHGVW-EKFTKGWFEKGRLFSWADIGSWESVATHDEEIKREADWFRIGFEPLFVDLSKLGCFYLIFLLVKWFSLACVSVLVEDSVMQLMYMFILHAVDLTVLIRASPFANRVVNMMNAMLTAVDCASSALMLGDAGFDEHETS--RFNDIAFFLQLVALIALVIPVYIDTGVALTILGVEKLSQQCAARDDEADVTQTLDAEGMEEQQGREYVRRFARRSWPQFWFSMVRHNVHACVTDIREGIRAPGS 7611
+S L+P+ CR S S WLHFPH+EL+FLF+A+EGAVA+Q+SAL+ A CP V A AL+ +P+LM V RT VR+ PN L+VF+ + D D A + E GQ + + K GW E LF+WA+ G+WE+ T +E +RE WFRIGFEPLFVD +K G +++ F LV+W +L C+ L+++SV+QL LH + +L+ PFAN V+N M A L +D AL+ A E + + + + LQL AL AL+IP+YIDT + L I + Q+ + T+ E + +VR F RRSWP+ W +M+ N+ AC +D REGIR PG+
Sbjct: 1017 ESRLSPVAECREHSRSAWLHFPHVELVFLFFAYEGAVASQVSALREAGCPPVMIAAGLALVFYPILMFVAVLRTFFVRVRPNTLIVFTPKEADDDTGD----------------------AGDAEEGQRARSASFLSKVRAGWEEDHSLFAWANKGTWETAETDNEGTRREGQWFRIGFEPLFVDFTKSGAWFVAFTLVEWAALGCIGALIDESVLQLSLFCALHTLSFLLLVVFRPFANSVINAMGAGLVGIDAVCMALLAVSASRWEGTAAAGKVDSVVMLLQLFALCALIIPIYIDTSLIL-IGAIRSRLQKSTTTTPQHVRTEAEKEEDL-------FVRHFIRRSWPRTWCTMLGKNIFACASDTREGIRPPGT 1365
BLAST of mRNA_P-littoralis_Contig677.12.1 vs. uniprot
Match: A0A6H5JR60_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JR60_9PHAE) HSP 1 Score: 233 bits (593), Expect = 5.570e-60 Identity = 145/412 (35.19%), Postives = 207/412 (50.24%), Query Frame = 1
Query: 6469 LPREPDSNLNPILACRRRSCSMWLHFPHLELLFLFWAFEGAVAAQISALKNAECPGVFWLALAALLLFPVLMIAMVWRTISVRIHPNELLVFSLYASGDQENDEGGEQQQSARQADGGELSLTTRASETETGQELQHGVWEKFTKGWFEKGRLFSWADIGSWESVATHDEEIKREADWFRIGFEPLFVDLSKLGCFYLIFLLVKWFSLACVSVLVEDSVMQLMYMFILHAVDLTVLIRASPFANRVVNMMNAMLTAVDCASSALMLGDAGFDE--HETSRFNDIAFFLQLVALIALVIPVYIDTGVALTILGVEKLSQQCAARDDEADVTQTLDAEGMEEQQGREYVRRFARRSWPQFWFSMVRHNVHACVTDIREGIRAPGSGQYRRYDRPPQVNKPGRAGTRTGRGWQVR 7698
+P ++ LNP+ CR S S WLHFPH+EL+F F+AFEGAVA+ SA++N ECP +F+ A+AA++L P+LM V+RT+ VR+ PN LL+F YA G D A GG LS +F W E LFSWAD WE+ T D +I RE DW RIGFEP+FV+ +K G ++++ LV+W +LA V V+VE+S++QL+ L +V +L+ PFAN V N + A +TA+D S + A + E + N LQL++L EE++ R+Y+R + RR W W +++ HNV AC D EG+R P R P +++ +AG G +VR
Sbjct: 391 VPMRSENRLNPVATCREHSTSAWLHFPHVELVFQFFAFEGAVASFASAIRNYECPKIFYTAIAAMVLCPLLMFVTVFRTLLVRVRPNVLLIFKTYAEGGTSGD--------APSRAGGFLS--------------------RFKSSWEENYSLFSWADKRQWETAQTPDRQISREGDWCRIGFEPVFVEYTKRGTWFIVISLVEWVALALVGVMVENSIVQLVLFCGLPSVIFLILMFLKPFANSVTNNIEACVTAIDAISMGVFAASALWWEGTDRAAHLNTSVVVLQLLSLFD-------------------------------------------EEREARDYIRSYTRRQWCGTWCTVLGHNVFACARDTSEGVRKPRFTTAARSGPYPPLDRSKQAGGTEDNGIRVR 731
BLAST of mRNA_P-littoralis_Contig677.12.1 vs. uniprot
Match: D7G1L9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1L9_ECTSI) HSP 1 Score: 226 bits (575), Expect = 1.210e-58 Identity = 153/397 (38.54%), Postives = 217/397 (54.66%), Query Frame = 1
Query: 6475 REPDSNLNPILA-CRRRSCSMWLHFPHLELLFLFWAFEGAVAAQISALKNAECPGVFWLALAALLLFPVLMIAMVWRTISVRIHPNELLVFSLYASGDQENDEGGEQQQSARQADGGELSLTTRASETETGQELQHGVWEKFTKGWFEKGRLFSWADIGSWESVATHDEEIKREADWFRIGFEPLFVDLSKLGCFYLIFLLVKWFSLACVSVLVEDSVMQLMYMFILHAVDLTVLIRASPFANRVVNMMNAMLTAVDCASSALMLGDAGFDEHETSR---FNDIAFFLQLVALIALVIPVYIDTGVALTILGVEKLSQQCAARDDEADVTQTLDAEGMEEQQGREYVRRFARRSWPQFWFSMVRHNVHACVTDIREGIR-----APGSGQYRRYDRP 7638
R L +LA CR RS S+WL+FPH+ELLFL +AFEGA+A+Q++ ++ CP VF+ A A+L+++PVLMI + +RT VR+ P+ L+VF G++EN DG + K G E +F+WA+ G+WE+V T DEE RE D FRIGFEPLFVD +K ++ ++ L++ +AC +VLV+DSV+QL LH++ +L+ PFAN ++N M A LT +D AS A ML D TSR + LQLVAL+AL+IP+YID ILG + + + + D +T + E EE R+++R + R+W W M+ NV ACV D G R A +G R D P
Sbjct: 239 RSRPKGLRAMLADCRYRSSSVWLYFPHIELLFLLFAFEGAMASQLATMRGGGCPWVFYSACASLVVYPVLMIILSYRTHRVRVAPDTLIVFK--PVGEEEN----------HGTDG----------------TVPRSFLSKVRTGLKEDHSMFAWANTGAWETVETPDEETVREGDQFRIGFEPLFVDFTKKASWFTVYFLLEMTGIACTAVLVDDSVVQLFLFCGLHSLSFLLLVIFRPFANSIINTMGACLTLIDAASMA-MLADTAHRWQRTSRAKRMDTAVVVLQLVALVALIIPMYIDASTV--ILGAIREKIRSLTKSNTCDDGRT-EEEAKEE---RKFIRGYIFRAWGPTWCRMLGSNVLACVADTTRGTRRVNTSAARTGPQRNADAP 600
BLAST of mRNA_P-littoralis_Contig677.12.1 vs. uniprot
Match: A0A6H5KV63_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KV63_9PHAE) HSP 1 Score: 211 bits (536), Expect = 4.660e-54 Identity = 142/416 (34.13%), Postives = 199/416 (47.84%), Query Frame = 1
Query: 6484 DSNLNPILACRRRSCSMWLHFPHLELLFLFWAFEGAVAAQISALKNAECPGVFWLALAALLLFPVLMIAMVWRTISVRIHPNELLVFSLYASGDQENDEGGEQQQSARQADGGELSLTTRASETETGQELQHGVWEKFTKGWFEKGRLFSWADIGSWESVATHDEEIKREADWFRIGFEPLFVDLSKLGCFYLIFLLVK------------------WFSLACVSVLVEDSVMQLMYMFILHAVDLTVLIRASPFANR--------------------VVNMMNAMLTAVDCASSALMLGDAGFDEHETS--RFNDIAFFLQLVALIALVIPVYIDTGVALTILGVEKLSQQCAARDDEADVTQTLDAEGMEEQQGREYVRRFARRSWPQFWFSMVRHNVHACVTDIREGIRAPGS 7611
+S L+ + CR S WLHFPH+EL+FLF+A+EGAVA+Q+SAL+ A C V A AL+ +P+LM V RT VR+ PN +VF LS K GW E LF+WA+ G+WE+ T +E I+RE WFRIGFEPLFVD +K G +++ F LV+ W +L C+ L+++SV+QL LH + +L+ PFANR V+N M A L +D AL+ A E + + + LQL A AL+IP+YIDT + L I + Q+C + T+ E + +VR F RRSWP+ W +++ N+ AC +D EGIR PG+
Sbjct: 158 ESRLSSVAECREHSQFAWLHFPHVELVFLFFAYEGAVASQVSALREAGCLPVMIAAGLALVFYPILMFVAVLRTFFVRVRPNTPIVF---------------------------LS--------------------KVRAGWEEDHSLFAWANKGTWETAETDNEGIRREGQWFRIGFEPLFVDFTKSGAWFVAFTLVEGCLGLGHAVSFLLIYFAQWAALGCIGALIDESVLQLSLFCALHTLSFLLLVVFRPFANRLERKTQRVRFLDRLYFRAHSVINAMGAGLVGIDAVCMALLAVSASRWEGTVAAGKVDSAVMLLQLFARCALIIPIYIDTSLML-IEAIRSRLQKCTTTAPQHVRTEAEKVEDL-------FVRHFIRRSWPRTWCTILGKNIFACASDTSEGIRPPGT 518
BLAST of mRNA_P-littoralis_Contig677.12.1 vs. uniprot
Match: A0A6H5J9C2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J9C2_9PHAE) HSP 1 Score: 214 bits (544), Expect = 6.850e-54 Identity = 131/377 (34.75%), Postives = 205/377 (54.38%), Query Frame = 1
Query: 6481 PDSNLNPILACRRRSCSMWLHFPHLELLFLFWAFEGAVAAQISALKNAECPGVFWLALAALLLFPVLMIAMVWRTISVRIHPNELLVFSLYASGDQENDEGGEQQQSARQADGGELSLTTRASETETGQELQHGVWEKFTKGWFEKGRLFSWADIGSWESVATHDEEIKREADWFRIGFEPLFVDLSKLGCFYLIFLLVKWFSLACVSVLVEDSVMQLMYMFILHAVDLTVLIRASPFANRVVNMMNAMLTAVDCASSALMLGDAG-FDEHETS-RFNDIAFFLQLVALIALVIPVYIDTGVALTILGVEKLSQQCAARDDEADVTQTLDAEGMEEQQGREYVRRFARRSWPQFWFSMVRHNVHACVTDIREGIRAP 7605
P +++ + CR S S WLH+PHLEL+FLF+AFEGAV +Q++AL++A + + A+A L+L+P+LM+ MV RT V + P+ L+VF+ +SETE + + G LFSWAD G WE+V T +++ +R+ADWFRIGFEPLF D ++ G +++I+ L++ LA ++VLV++S MQ + +H++ +L+ PFAN V+N + AM+ D ++ AG F+ T+ R + +Q + + LVIP+Y+DT V++ + + R++EAD + RE +R R W + WF MV N+ AC+ D REGIR P
Sbjct: 346 PGNSIGQVSDCRELSQSPWLHYPHLELIFLFFAFEGAVTSQMAALRSANSSTILYAAVATLVLYPLLMVVMVARTHRVWVQPDALIVFA--------------------------------SSETEEALAGKPSTLSRTVSGLKNDFSLFSWADKGQWETVQTANDKARRKADWFRIGFEPLFADFTQAGSWFIIYTLIECAVLASIAVLVDNSAMQFLLFCAMHSLTFVLLVGWKPFANSVLNAVAAMVMLTDAVCMGMLALAAGTFNGTATAARMDTAVMVIQALCIAVLVIPLYVDTAVSIYGM-IRNRKGSVDERENEADRAE------------REVTKRLTLRLWGRAWFRMVFSNMFACLRDTREGIRGP 677 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig677.12.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig677.12.1 >prot_P-littoralis_Contig677.12.1 ID=prot_P-littoralis_Contig677.12.1|Name=mRNA_P-littoralis_Contig677.12.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=2856bp MQGFFKADEQEQQEQYDSLPTASPLPSALSPPSPTPRDDGESSSTISLWSback to top mRNA from alignment at P-littoralis_Contig677:73985..98117- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig677.12.1 ID=mRNA_P-littoralis_Contig677.12.1|Name=mRNA_P-littoralis_Contig677.12.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=24133bp|location=Sequence derived from alignment at P-littoralis_Contig677:73985..98117- (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig677:73985..98117- >mRNA_P-littoralis_Contig677.12.1 ID=mRNA_P-littoralis_Contig677.12.1|Name=mRNA_P-littoralis_Contig677.12.1|organism=Pylaiella littoralis U1_48|type=CDS|length=8568bp|location=Sequence derived from alignment at P-littoralis_Contig677:73985..98117- (Pylaiella littoralis U1_48)back to top |