mRNA_P-littoralis_Contig675.11.7 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig675.11.7 vs. uniprot
Match: A0A6H5J9H9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J9H9_9PHAE) HSP 1 Score: 1038 bits (2685), Expect = 0.000e+0 Identity = 822/1402 (58.63%), Postives = 894/1402 (63.77%), Query Frame = 3
Query: 3 CGDVRASSEYFAGLTELMAALEEERGKADRYLVSLPLPPSEGMSPGGGLLPPVPLVMEALGNVA--ATPAPNVAFLASARENKVSWSDRMMRRSAAE-GPLPVSAQAQQALLPPTPSTTSTAFASSSGVVAGTSSRDLFLGSGASRSPPRLGSPIHQRFENFASDFMPPASASXXXXXXXXXXXXXXXXXXSRKISLHKSISRKISASRTSS---SKEPAFSXXXXXXXXXXXXXXXXXXXXXX--ACAVAHRAALTLEEQWETLSDMVQCTSRLSPEDAAKVQLSGIPRLESARLLHFDGSSALLPGDGATAASLSSNSQATAPSNALFYNPFDEDSAGMDGGSLDGXXXXXXXXXXXXXXXXXXXXXXXGHQGDRGGAADKNRGSGXXXXXXSGAEVPARWAVGETGRVVARFSNPLQVPLDVESITAVVDGARVQAFSTSVLLPPRAEFHEVVLFVKPLEDGHVVLRGVSVEVLSLVSMCRVDKWGRGISHGPRAPPPRTYKSLRATFRRPRHVLTMDTVDIAADXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVIGAGGGAGLAPGVAEGGTAGDEQSGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXREAGIREEEGTQQQGNDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEDAEFSPDPRMRKGETACRKLRVEGAAPTVRVSRVSPSTSEALAGEEIEEILELANQGGPSVGVMEVWARPCRSSGGSASKPPSPAMSLLFSLAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAVSCLGLDVVLAGPAGIPSGTSEG------VAPGDAVKLPIRLSAGQAGDRDVVTEVLVKYSEKEGAAFHRQLRLPIRLGIRGGLRVCSLRVAQFVGGGLSFDDDADATECLLLLELANDSTFPVFSWRCHQQRRPAITPTPXXXAPGGAKGGAKLEGGSGVRKAEAGLGEGEVVEIPGWSRRCLSLRIPRLRVRPEGKS--KEQDEPRSPLCLRPLFEWEKSLAKHLLEELSLRWSTERDEAVAXXXXXXXXXXSSSGSPVDKEEAVWKSGRRGRVRVSLDQIGDDGSCRVLWAGGGIGXXXXXXXXXXXXXXXPVRPPRHPDAVPECLLGALLPPVRLSCVPFAFAP--PGRANGGG---------GLLLGAEGYPRVVINEAGQAEVDGRA-DGVEGGWAAKTTVDSFLPVSMVVHNASAWPIDVIVEVTSTAEGEEIEGPRCWGDDDEDDSGPVMWSGMPRRRLGKLAPGRSLCHGLLACFLAPGNVSIGFTCRVKVESPSAPYGSATASSSSXXXXXAATGVGTPSQG----AGEVADGWHPVKCHLPLRVSVSTKGRQAAE 4112
CGDV+ASSEYFAGL EL AALE+ERGKADRYLV+LPLPPSEG+SPGG +LPPVPLVMEALGNVA ++ A +ASARE++VSWSDRMMRR+ AE GP P S QAQQ LPPTPSTTS +F S+SG G SSRD FLGSG RSP SPI RFE ASDF+ PAS+SXXXXXXXXXXXXX SRKISL KSI RKI ASR+S +E +FS XXXXXXXXXX CAVAHRAALTLEEQWETLSDM CTSRLSPED A+VQ G GD GG GAE+PARWA GETGRVV RFSNPLQVPL+VESITAVVDGARVQAF TSVLLPPRAEFHEVVLF+KPLEDG VVLRGVSVEVLSLV+MCRVDK+GRG+S GPRAPPPRTYKSLRATFR+P+ LT DTVDIAA XXXXXXXXXXXXXXXXX +G GGG V GGT XXXXXXXXXXXXXXXXXXXXXXXXXX A EG XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX EF PDPRM KGETACRKLRVE AAP VR+SR SP TSE LAGEEIEE+LEL NQGGPSVGVMEVW RPCR S KP + AMSLLFSLA XXXXXXXXXXXXXXX A+S LGLDV LA V PG AV+L ++L AGQA +RDVVTEVLVKYSEKEGA FHRQLRLP+RL IRGGLRVCSLRVAQF+GGGL FD DAD+TECLL+LELANDS FPVF WR H+ ++ G G +GG GLG G+VVEIPG SRRCLSLR+PRLRVRPEG+S +++DEPRSPL LRPLF+WEKSLA H+LEELSLRWST R+EA+A +P+ E G RVS PRHP+AVPECL+G LLPPVRLSC+P AF P G A GG GL EG PRV I+EAG+ +V+G VEG WAA+TTVDSFLPVS+VVHN+S WPIDVIVEVTST+EG E EG WG+ DEDDSG VMWSGMPRRRLGKLAPGRS CHGLLACFL PG+VSIGFTCRVKVES SAPYGSAT+ XXXXX S+ GE DGWHPV CHLPL VSV K + E
Sbjct: 535 CGDVQASSEYFAGLAELTAALEDERGKADRYLVTLPLPPSEGVSPGGRMLPPVPLVMEALGNVATASSTAGAAPSIASARESRVSWSDRMMRRATAEHGPPPPSMQAQQTFLPPTPSTTSASFTSTSGPATGNSSRDAFLGSGHVRSPTMPASPIQHRFETLASDFLHPASSSXXXXXXXXXXXXXGAKK-SRKISLPKSIGRKIQASRSSGVVGRREASFSAMAPPLLPVEAAXXXXXXXXXXXSVCAVAHRAALTLEEQWETLSDMALCTSRLSPEDVARVQGGG---------------------------------------------------------------------------------------GDNGGKP--------------GAELPARWAAGETGRVVTRFSNPLQVPLEVESITAVVDGARVQAFPTSVLLPPRAEFHEVVLFIKPLEDGQVVLRGVSVEVLSLVTMCRVDKFGRGVSPGPRAPPPRTYKSLRATFRQPKQALTTDTVDIAAXXXXXXXXXXXXXXXXXXEEEGGSPVDSEGNPAEGTG------VGFGGGD---VEVIGGGTG-----------------------VSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXASPHGREGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEFVPDPRMWKGETACRKLRVESAAPVVRLSRASPPTSEVLAGEEIEEVLELVNQGGPSVGVMEVWTRPCR----STKKPLASAMSLLFSLADSAXXXXXXXXXXXXXXXEFGGEGGSGS--------------AMSSLGLDVGLAXXXXXXXXXXXXXXXXXVVVPGGAVRLALKLRAGQAANRDVVTEVLVKYSEKEGAPFHRQLRLPLRLTIRGGLRVCSLRVAQFLGGGLRFDVDADSTECLLVLELANDSAFPVFPWRSHRAKQKQQGRHRRQLTAGTI--GGPEDGG--------GLGRGQVVEIPGGSRRCLSLRVPRLRVRPEGRSLGRDEDEPRSPLSLRPLFDWEKSLASHILEELSLRWSTAREEALAAASLGTAAGGGVVPNPLTGEWTAAAGGGGEGARVSRPSQ-----------------------------------PRHPEAVPECLVGVLLPPVRLSCLPCAFVPGVAGVAAVGGVXCSAVGANGLFGAGEGVPRVGIDEAGRVQVEGGGLREVEGAWAAQTTVDSFLPVSLVVHNSSRWPIDVIVEVTSTSEGREEEGSVYWGNADEDDSGHVMWSGMPRRRLGKLAPGRSACHGLLACFLTPGDVSIGFTCRVKVESASAPYGSATSXXXXXXXXXXXXXXXGSSETFDPELGECGDGWHPVMCHLPLSVSVLPKTAEGRE 1739
BLAST of mRNA_P-littoralis_Contig675.11.7 vs. uniprot
Match: D8LGF7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LGF7_ECTSI) HSP 1 Score: 637 bits (1644), Expect = 8.320e-201 Identity = 617/1160 (53.19%), Postives = 671/1160 (57.84%), Query Frame = 3
Query: 450 SPIHQRFENFASDFMPPASASXXXXXXXXXXXXXXXXXX----SRKISLHKSISRKISASRTSS---SKEPAFSXXXXXXXXXXXXXXXXXXXXXXACAVAHRAALTLEEQWETLSDMVQCTSRLSPEDAAKVQLSGIPRLESARLLHFDGSSALLPGDGATAASLSSNSQATAPSNAL----FYNPFDEDSAGMDGGSLDGXXXXXXXXXXXXXXXXXXXXXXXGHQGDRGGAADKNRGSGXXXXXXSGAEVPARWAVGETGRVVARFSNPLQVPLDVESITAVVDGARVQAFSTSVLLPPRAEFHEVVLFVKPLEDGHVVLRGVSVEVLSLVSMCRVDKWGRGISHGPRAPPPRTYKSLRATFRRPRHVLTMDTVDIAADXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVIGAGGGAGLAPGVAE--GGTAGDEQSGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXREAGIREEEGTQQQGNDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEDAEFSPDPRMRKGETACRKLRVEGAAPTVRVSRVSPSTSEALAGEEIEEILELANQGGPSVGVMEVWARPCRSSGGSASKPPSPAMSLLFSLAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAVSCLGLDVVLAGPAGIPSGTSEGVAPGDAVKLPIRLSAGQAGDRDVVTEVLVKYSEKEGAAFHRQLRLPIRLGIRGGLRVCSLRVAQFVGGGLSFDDDADATECLLLLELANDSTFPVFSWRCHQQRRPAITPTPXXXAPGGAKGGAKLEGGSGVRKAEAGLGEGEVVEIPGWSRRCLSLRIPRLRVRPEGKS--KEQDEPRSPLCLRPLFEWEKSLAKHLLEELSLRWSTERDEAVAXXXXXXXXXXSSSGSPVDKE--------EAVWKSGRRGRVRVSLDQIGDDGSCRVLWAGGGIGXXXXXXXXXXXXXXXPVRP--PRHPDAVPECLLGALLPPVRLSCVPFAFAPPGRANGGG---------GLLLGAEGYPRVVINEAGQAEVDGRA-DGVEGGWAAKTTVDSFLPVSMVVHNASAWPIDVIVEVTSTAEGEEIEGPRCWGDDDEDDSGPVMWSGMPRRR 3824
SPI RFE ASDF+ PAS+ XXXXXXXXXXXXXXXXXX SRKISL KSI RKI ASR+S +E +FS XXXXX CAVAHRAALTLEEQWETLSDM CTSRLSPEDAA+VQLSGIPRLESARLLH G ALLPGDGA + + FYNPF+E GMD XX G +G R A +G G GAE+PARWA GETGRVVARFSNPLQVPL+VESITAVVDGARVQAF TSVLLPPRAEFHE DG VVLRGVSVEVLSLV+MCRVDK+GRG+S GPRAPPPRTYKSLRATFR+P+ LT DTVDIAA XXXXXXXXXXXXXXXXX G G G G E GG G S XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX EF+PDPRMRKGETACRKLRVE AAP VR+SR SP TSE LAGEEI E VAQF+GGGLSFD DAD+TECLL+LELANDS FPVF WR H+ ++ G G +GG GLG G+VVEIP SRRCLSLR+PRLRVRPEG+S ++ DEPRSPL LRPLF+WEKSLA H+LEELSLRWST R+EA+A P E E W+SGRRG VR++LDQ+G+DGSC XXXXXXXXXXXXX RP PRHP+AVPECLLG LLPPVRLSC+P AF P GGG GL EG PRV I+EAG+ +V+G VEG WAA+TTVDSFLPVS+VVHN+S WPIDV+VEVTST+EG E G CWG++DEDDSG VMWSGMPRRR
Sbjct: 4 SPIQHRFETLASDFLQPASSXXXXXXXXXXXXXXXXXXXGAKKSRKISLPKSIGRKIQASRSSGVLGRREASFSATGPPLLPIEAAGXXXXXS---VCAVAHRAALTLEEQWETLSDMALCTSRLSPEDAARVQLSGIPRLESARLLHLHGGLALLPGDGAASQAXXXXXXXXXXXXXXXXXXFYNPFEEAVGGMD--------------DXXESENGDGDIDSHGEEGGR--ATQTGQGGGGDSGGRPGAELPARWAAGETGRVVARFSNPLQVPLEVESITAVVDGARVQAFPTSVLLPPRAEFHE---------DGQVVLRGVSVEVLSLVTMCRVDKFGRGVSPGPRAPPPRTYKSLRATFRQPKQALTTDTVDIAAXXXXXXXXXXXXXXXXXXEEEGGSPVDSEGNPAE------------GTGVGFGGGDVEVIGGGTGVSSSVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX---------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEFTPDPRMRKGETACRKLRVESAAPVVRLSRASPPTSEVLAGEEIVE---------------------------------------------------------------------------------------------------------------------------------------------------------------------------VAQFLGGGLSFDGDADSTECLLVLELANDSAFPVFPWRSHRAKQQQQGRHRRQLTAGTI--GGPEDGG--------GLGRGQVVEIPRGSRRCLSLRVPRLRVRPEGRSSGRDGDEPRSPLSLRPLFDWEKSLASHILEELSLRWSTAREEALAAASLGTASGGGVVPDPFTGEGTASAGGGEEGWRSGRRGCVRIALDQVGEDGSCHRS------SXXXXXXXXXXXXXAGVSRPSQPRHPEAVPECLLGVLLPPVRLSCLPCAFVPSVAGGGGGVGWSAAGAKGLFGAGEGAPRVGIDEAGRVQVEGGGIRDVEGAWAAQTTVDSFLPVSLVVHNSSRWPIDVLVEVTSTSEGREEGGSVCWGNEDEDDSGHVMWSGMPRRR 927 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig675.11.7 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 2
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig675.11.7 >prot_P-littoralis_Contig675.11.7 ID=prot_P-littoralis_Contig675.11.7|Name=mRNA_P-littoralis_Contig675.11.7|organism=Pylaiella littoralis U1_48|type=polypeptide|length=1395bp MAALEEERGKADRYLVSLPLPPSEGMSPGGGLLPPVPLVMEALGNVAATPback to top mRNA from alignment at P-littoralis_Contig675:46296..65033- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig675.11.7 ID=mRNA_P-littoralis_Contig675.11.7|Name=mRNA_P-littoralis_Contig675.11.7|organism=Pylaiella littoralis U1_48|type=mRNA|length=18738bp|location=Sequence derived from alignment at P-littoralis_Contig675:46296..65033- (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig675:46296..65033- >mRNA_P-littoralis_Contig675.11.7 ID=mRNA_P-littoralis_Contig675.11.7|Name=mRNA_P-littoralis_Contig675.11.7|organism=Pylaiella littoralis U1_48|type=CDS|length=4185bp|location=Sequence derived from alignment at P-littoralis_Contig675:46296..65033- (Pylaiella littoralis U1_48)back to top |