mRNA_P-littoralis_Contig67.20.2 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig67.20.2 vs. uniprot
Match: A0A6H5JK39_9PHAE (Cyclin N-terminal domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JK39_9PHAE) HSP 1 Score: 585 bits (1507), Expect = 5.560e-192 Identity = 335/424 (79.01%), Postives = 349/424 (82.31%), Query Frame = 1
Query: 340 MHTRRQ--VQENSGFGMDENTKPSDLGGVAAPAAAGKAGLGGVAKKGLGGVQTRRGLRDITNKVEEPAPEGAAGKGGKKPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTASRQIRTATRAPTDIDLRDANEPLAVTEYVEDLYVFLREREIATQVDRRYMDGQPNVNERMRSILIDWLVEVHLKFKLVPDTLYLTVYLIDKYLELEKVSRQNLQLVGVTAMLLASKYEEIYPPQIRDLVFITDRAYNRDQILEMESAMANALQFRLTVPTIYCFLLRYLKAAHADKKIVQLSCYVAERMLQEVTMLDYLPSIVACCAIYVARKNMGRTCWSPTLEKYTKYRVEQLMPCLTEISRVLNEEGGDLEAVKKKFTSSKFGSVASMEVNVLPDDLP 1605
MHTRR VQEN+GFGMDEN KPSDLG AAAGKA LGG AKKGLGGVQTRRGLRDITNK EE EGA GKGGKKP XXXXXXXXXXXXXX ASR IRTA+R PTDID RDA+EPLAVTEYVEDLYVFLREREIAT+VDR YMD QPNVNERMRSILIDWLVEVHLKFKLVPDTLYLTVYLIDKYLELE V+RQNLQLVGVTAMLLASKYEEIYPPQIRDLVFITDRAYNRDQILEMES MA+ALQFRLTVPTIYCFLLRYLKAAHADKKIVQLSCYVAERMLQEV+MLDYLPS+VACCAIYVARKNMGRTCWSPTLEKYTKYRVE LMPCL EISRVL +EGGDLEAVKKKF+SSKFGSVA+M+V++LPDD P
Sbjct: 1 MHTRRNTAVQENAGFGMDENAKPSDLG-----AAAGKAALGGGAKKGLGGVQTRRGLRDITNKAEEAVAEGA-GKGGKKPGARVASASVGSADTGAAAPVVPSAASLXXXXXXXXXXXXXXTQTTAPAAPAAISSAP-----ASRPIRTASRTPTDIDQRDADEPLAVTEYVEDLYVFLREREIATKVDRGYMDSQPNVNERMRSILIDWLVEVHLKFKLVPDTLYLTVYLIDKYLELETVTRQNLQLVGVTAMLLASKYEEIYPPQIRDLVFITDRAYNRDQILEMESTMASALQFRLTVPTIYCFLLRYLKAAHADKKIVQLSCYVAERMLQEVSMLDYLPSVVACCAIYVARKNMGRTCWSPTLEKYTKYRVEDLMPCLCEISRVLKQEGGDLEAVKKKFSSSKFGSVATMKVSILPDDSP 413
BLAST of mRNA_P-littoralis_Contig67.20.2 vs. uniprot
Match: A0A836CKN2_9STRA (Cyclin-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CKN2_9STRA) HSP 1 Score: 341 bits (874), Expect = 1.780e-101 Identity = 172/274 (62.77%), Postives = 219/274 (79.93%), Query Frame = 1
Query: 781 ATRAPTDIDLRDANEPLAVTEYVEDLYVFLREREIATQVDRRYMDGQPNVNERMRSILIDWLVEVHLKFKLVPDTLYLTVYLIDKYLELEK-VSRQNLQLVGVTAMLLASKYEEIYPPQIRDLVFITDRAYNRDQILEMESAMANALQFRLTVPTIYCFLLRYLKAAHADKKIVQLSCYVAERMLQEVTMLDYLPSIVACCAIYVARKNMGRTCWSPTLEKYTKYRVEQLMPCLTEISRVLNEEGGDLEAVKKKFTSSKFGSVASMEVNVLPDD 1599
+ R+ DID RD EPLAVTEYVEDLY +LR +E T++ ++ Q +V+ RM +IL+DWLVEVHL+F+LVPDTLYLTVY+I +YL L V+R NLQLVGVTA+LLASKYEEIYPP+IRDLV++TD+AY ++QIL+ME+ M N L+FR+TVPT YCFLLRYLKAAHAD++IVQLSCYVAERMLQE ML +LPS+ AC AIY+AR+N+GR WSPTLEKYT Y L CL + ++ GDL+AV+ KFTS +FG+VA+M++++ DD
Sbjct: 117 SARSANDIDERDRKEPLAVTEYVEDLYSYLRAQEQVTRLSPAAIEDQEHVSARMFAILVDWLVEVHLRFRLVPDTLYLTVYVIARYLALTPAVTRSNLQLVGVTALLLASKYEEIYPPEIRDLVYMTDKAYTKEQILDMETEMLNRLEFRITVPTTYCFLLRYLKAAHADRRIVQLSCYVAERMLQEARMLRHLPSVAACAAIYLARRNLGRNAWSPTLEKYTGYVEADLASCLRDTCELM-AACGDLKAVRSKFTSKQFGAVATMDIDLSCDD 389
BLAST of mRNA_P-littoralis_Contig67.20.2 vs. uniprot
Match: F0XYQ7_AURAN (Cyclin N-terminal domain-containing protein (Fragment) n=2 Tax=Pelagomonadales TaxID=54409 RepID=F0XYQ7_AURAN) HSP 1 Score: 322 bits (826), Expect = 7.350e-97 Identity = 158/263 (60.08%), Postives = 204/263 (77.57%), Query Frame = 1
Query: 799 DIDLRDANEPLAVTEYVEDL----YVFLREREIATQVDRRYMDGQPNVNERMRSILIDWLVEVHLKFKLVPDTLYLTVYLIDKYLELEKVSRQNLQLVGVTAMLLASKYEEIYPPQIRDLVFITDRAYNRDQILEMESAMANALQFRLTVPTIYCFLLRYLKAAHADKKIVQLSCYVAERMLQEVTMLDYLPSIVACCAIYVARKNMGRTCWSPTLEKYTKYRVEQLMPCLTEISRVLNEEGGDLEAVKKKFTSSKFGSVASM 1575
D+D RDA+ P AVTEYV D+ Y RE+E+ T V+ YM Q ++NE+MR+ILIDWLVEVHLKFKLVP+TLYLTV LID+YL V R NLQLVGV+A+LLASKYEEIYPP+++DLV+ITD+AY ++QIL ME M AL++++T+ +I+CF++RYLKA HAD+++V L+ YVAERMLQE ML YLPS+VA CA+Y+ARKN+GR WSPTL Y +Y L CL E+S V++ G L+AVKKK++S K+G VA M
Sbjct: 1 DVDARDASNPQAVTEYVNDMRAPAYAHFREKELETSVNPTYMSRQAHINEKMRAILIDWLVEVHLKFKLVPETLYLTVNLIDRYLLGSPVERSNLQLVGVSALLLASKYEEIYPPELKDLVYITDKAYTQEQILSMEEKMVKALKYKMTIASIHCFMMRYLKAGHADRRMVWLASYVAERMLQEYAMLKYLPSMVAACAVYIARKNLGRNAWSPTLLHYAQYTESSLRACLEEMSSVIHSTKGSLQAVKKKYSSEKYGQVALM 263
BLAST of mRNA_P-littoralis_Contig67.20.2 vs. uniprot
Match: A0A1E7FEB9_9STRA (Cyclin_N-domain-containing protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FEB9_9STRA) HSP 1 Score: 307 bits (787), Expect = 1.970e-91 Identity = 150/265 (56.60%), Postives = 200/265 (75.47%), Query Frame = 1
Query: 793 PTD-IDLRDANEPLAVTEYVEDLYVFLREREIATQVDRRYMDGQPNVNERMRSILIDWLVEVHLKFKLVPDTLYLTVYLIDKYLELEKVSRQNLQLVGVTAMLLASKYEEIYPPQIRDLVFITDRAYNRDQILEMESAMANALQFRLTVPTIYCFLLRYLKAAHADKKIVQLSCYVAERMLQEVTMLDYLPSIVACCAIYVARKNMGRTCWSPTLEKYTKYRVEQLMPCLTEISRVLNEEGGDLEAVKKKFTSSKFGSVASMEVN 1584
P+D ID RDA +PL TEYV+D+Y R +E +T V YMD Q ++NERMRSIL+DWLVEVHLKFKLVP+TLYLT+ LID+YLE ++VSR LQLVGVT++L+ASKYEEIYPP++RDLV+I DRAY R +I+EME + L++ +T+P+ + FL+R+LKAAHADK+IVQLSCY+ + LQ +L YLPS +A A+++AR+ +GR WSPTL KY KYR E +MP + +L AV KK+TSS++G VAS+ ++
Sbjct: 3 PSDNIDERDAEDPLCATEYVQDMYEHFRLKEGSTSVRPLYMDNQTHINERMRSILVDWLVEVHLKFKLVPETLYLTINLIDRYLERQEVSRPRLQLVGVTSLLIASKYEEIYPPELRDLVYICDRAYTRTEIIEMEEKILKTLEYNITIPSAHAFLVRFLKAAHADKRIVQLSCYILDGTLQSYNLLHYLPSQLAAAAVFIARRTVGRNSWSPTLLKYAKYREEDIMPIAKAVMNEKANAAQELRAVNKKYTSSRYGGVASLTLS 267
BLAST of mRNA_P-littoralis_Contig67.20.2 vs. uniprot
Match: B8BZ02_THAPS (Cyclin N-terminal domain-containing protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BZ02_THAPS) HSP 1 Score: 306 bits (785), Expect = 5.340e-91 Identity = 147/264 (55.68%), Postives = 201/264 (76.14%), Query Frame = 1
Query: 793 PTDIDLRDANEPLAVTEYVEDLYVFLREREIATQVDRRYMDGQPNVNERMRSILIDWLVEVHLKFKLVPDTLYLTVYLIDKYLELEKVSRQNLQLVGVTAMLLASKYEEIYPPQIRDLVFITDRAYNRDQILEMESAMANALQFRLTVPTIYCFLLRYLKAAHADKKIVQLSCYVAERMLQEVTMLDYLPSIVACCAIYVARKNMGRTCWSPTLEKYTKYRVEQLMPCLTEISRVLNEEGGDLEAVKKKFTSSKFGSVASMEVN 1584
P DID RD+++PL T YV+D+Y R +E+ T V YM+ Q +NERMRSIL+DWLVEVHLKFKLVP+TLYLTV +ID+YL +VSR LQLVGVTA+L+ASKYEEIYPP++RDLV+I DRAY++++ILEME + +L++++T+P+ + FL+RYLKAAHADKKIVQLSC++ + LQ ML YLPS +A A+++AR+ +GR WSPTL KY +YR E +MP + + +L AV KK+TSS++G VA++ ++
Sbjct: 15 PDDIDERDSDDPLCATSYVQDMYEHFRGKEVFTSVRPVYMEDQQFINERMRSILVDWLVEVHLKFKLVPETLYLTVNVIDRYLAKTEVSRPKLQLVGVTALLIASKYEEIYPPELRDLVYICDRAYSKNEILEMEEIILKSLEYQITIPSAHAFLVRYLKAAHADKKIVQLSCFILDGTLQSYNMLHYLPSQLAAAAVFIARRTVGRNAWSPTLLKYAQYREEDIMPVARAVLAEKSSSSTELRAVNKKYTSSRYGGVANISIS 278
BLAST of mRNA_P-littoralis_Contig67.20.2 vs. uniprot
Match: A0A7S4AAP4_9STRA (Hypothetical protein n=1 Tax=Pseudo-nitzschia australis TaxID=44445 RepID=A0A7S4AAP4_9STRA) HSP 1 Score: 303 bits (775), Expect = 3.400e-88 Identity = 146/262 (55.73%), Postives = 198/262 (75.57%), Query Frame = 1
Query: 793 PTD-IDLRDANEPLAVTEYVEDLYVFLREREIATQVDRRYMDGQPNVNERMRSILIDWLVEVHLKFKLVPDTLYLTVYLIDKYLELEKVSRQNLQLVGVTAMLLASKYEEIYPPQIRDLVFITDRAYNRDQILEMESAMANALQFRLTVPTIYCFLLRYLKAAHADKKIVQLSCYVAERMLQEVTMLDYLPSIVACCAIYVARKNMGRTCWSPTLEKYTKYRVEQLMPCLTEISRVLNEEGGDLEAVKKKFTSSKFGSVASM 1575
P D ID RDA +PL TEYV+D+Y RE+E T V YM+ Q ++NERMRSIL+DWLVEVHLKFKLVP+TLYLT+ LID+YLE ++VSR LQLVGVT++L+ASKYEEIYPP++RDLV+I DRAY R +I+EME + L++ +T+P+ + FL+RYLKAAHADK+IVQLSC++ + LQ +L YLPS +A A+++AR+ +GR WSPTL +Y YR E++ P + + +L AV KK+TSS++G+VA++
Sbjct: 116 PADNIDERDAEDPLCATEYVQDMYDHFREKEAITSVRPLYMENQTHINERMRSILVDWLVEVHLKFKLVPETLYLTINLIDRYLERQEVSRPRLQLVGVTSLLIASKYEEIYPPELRDLVYICDRAYTRKEIIEMEEQILKTLEYNITIPSAHAFLVRYLKAAHADKRIVQLSCFILDGTLQSYNLLHYLPSQLAAAAVFIARRTVGRNSWSPTLLRYAVYREEEIAPVAKAVMAEKSSAAHELRAVNKKYTSSRYGAVANL 377
BLAST of mRNA_P-littoralis_Contig67.20.2 vs. uniprot
Match: A0A6V2LUR7_9STRA (Hypothetical protein n=3 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6V2LUR7_9STRA) HSP 1 Score: 301 bits (772), Expect = 6.720e-88 Identity = 146/258 (56.59%), Postives = 198/258 (76.74%), Query Frame = 1
Query: 799 DIDLRDANEPLAVTEYVEDLYVFLREREIATQVDRRYMDGQPNVNERMRSILIDWLVEVHLKFKLVPDTLYLTVYLIDKYLELEKVSRQNLQLVGVTAMLLASKYEEIYPPQIRDLVFITDRAYNRDQILEMESAMANALQFRLTVPTIYCFLLRYLKAAHADKKIVQLSCYVAERMLQEVTMLDYLPSIVACCAIYVARKNMGRTCWSPTLEKYTKYRVEQLMPCLTEISRVLNEEGGDLEAVKKKFTSSKFGSVAS 1572
+ID RD ++PL VT+YV+D+Y REREI T V YM+GQ ++NERMRSIL+DWLVEVHLKFKLVP+TLYLT+ LID+YLE +VSR LQLVGVT++L+ASKYEEIYPP++RDLV+I DRAY++ +IL+ME + L++++T+P+ + FL+RYLKAAHADKKIVQLSCY+ + LQ +L YLPS +A A+++AR+ +GR WSPTL +Y Y E+++P + +L AV KK+TSS++G VA+
Sbjct: 111 NIDERDRDDPLCVTDYVQDMYEHFREREIHTSVRPIYMEGQQHINERMRSILVDWLVEVHLKFKLVPETLYLTINLIDRYLEKREVSRPKLQLVGVTSLLIASKYEEIYPPELRDLVYICDRAYSKQEILDMEEVILKTLEYQITIPSAHAFLVRYLKAAHADKKIVQLSCYILDGTLQSYNLLHYLPSQLAAAAVFIARRVVGRNSWSPTLLQYAGYCEEEVIPVARAVLAEKASTSPELRAVNKKYTSSRYGGVAN 368
BLAST of mRNA_P-littoralis_Contig67.20.2 vs. uniprot
Match: A0A7S2UBL8_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2UBL8_9STRA) HSP 1 Score: 298 bits (764), Expect = 8.370e-87 Identity = 143/262 (54.58%), Postives = 200/262 (76.34%), Query Frame = 1
Query: 799 DIDLRDANEPLAVTEYVEDLYVFLREREIATQVDRRYMDGQPNVNERMRSILIDWLVEVHLKFKLVPDTLYLTVYLIDKYLELEKVSRQNLQLVGVTAMLLASKYEEIYPPQIRDLVFITDRAYNRDQILEMESAMANALQFRLTVPTIYCFLLRYLKAAHADKKIVQLSCYVAERMLQEVTMLDYLPSIVACCAIYVARKNMGRTCWSPTLEKYTKYRVEQLMPCLTEISRVLNEEGGDLEAVKKKFTSSKFGSVASMEVN 1584
+IDLRDA++PL T+YV+++Y RE+E T V YM+ Q ++NERMRSIL+DWLVEVHLKFKLVP+TLYLTV LID+YLE ++VSR LQL+GVT++L+ASKYEEIYPP++RDLV+I DRAY++ +IL+ME + L++++T+P+ + FL+R LKAAHADK+IVQLSCY+ + LQ +L YLPS +A A+++AR+++GR WSPTL +Y YR E ++P I +L AV KK+TSS++G VA+ ++
Sbjct: 112 NIDLRDADDPLCATDYVQEMYSHFREKENLTSVRPIYMESQSHINERMRSILVDWLVEVHLKFKLVPETLYLTVNLIDRYLERKEVSRPTLQLIGVTSLLIASKYEEIYPPELRDLVYICDRAYSKREILDMEENILRTLKYKITIPSAHAFLVRNLKAAHADKRIVQLSCYILDGTLQSYNLLHYLPSQLAAAAVFIARRSVGRNSWSPTLLRYAAYREEDIIPVARAILAEKGTASNELRAVNKKYTSSRYGGVANTSLH 373
BLAST of mRNA_P-littoralis_Contig67.20.2 vs. uniprot
Match: A0A448ZSV9_9STRA (Cyclin N-terminal domain-containing protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448ZSV9_9STRA) HSP 1 Score: 298 bits (762), Expect = 2.130e-86 Identity = 144/265 (54.34%), Postives = 199/265 (75.09%), Query Frame = 1
Query: 793 PTD-IDLRDANEPLAVTEYVEDLYVFLREREIATQVDRRYMDGQPNVNERMRSILIDWLVEVHLKFKLVPDTLYLTVYLIDKYLELEKVSRQNLQLVGVTAMLLASKYEEIYPPQIRDLVFITDRAYNRDQILEMESAMANALQFRLTVPTIYCFLLRYLKAAHADKKIVQLSCYVAERMLQEVTMLDYLPSIVACCAIYVARKNMGRTCWSPTLEKYTKYRVEQLMPCLTEISRVLNEEGGDLEAVKKKFTSSKFGSVASMEVN 1584
P D ID RDA +PL TEYV+D+Y R +E T V YM+ Q ++NERMRSIL+DWLVEVHLKFKLVP+TLYLT+ LID+YLE ++VSR LQLVGVT++L+ASKYEEIYPP++RDLV+I DRAY R +I+EME + L++ +T+P+ + FL+R+LKAAHADK+IVQLSC++ + LQ +L YLPS +A A+++AR+ +GR WSPTL +Y YR E++ P + + +L AV KK+TSS++G+VA++ ++
Sbjct: 119 PADNIDERDAEDPLCATEYVQDMYDHFRAKEGITSVRPLYMENQTHINERMRSILVDWLVEVHLKFKLVPETLYLTINLIDRYLERQEVSRPRLQLVGVTSLLIASKYEEIYPPELRDLVYICDRAYTRKEIIEMEEQILKTLEYNITIPSAHAFLVRFLKAAHADKRIVQLSCFILDGTLQSYNLLHYLPSQLAAAAVFIARRTVGRNSWSPTLLRYAIYREEEIAPIARAVMAEKSSAAHELRAVNKKYTSSRYGAVANLALS 383
BLAST of mRNA_P-littoralis_Contig67.20.2 vs. uniprot
Match: A0A1Z5K2M1_FISSO (Cyclin B n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5K2M1_FISSO) HSP 1 Score: 294 bits (753), Expect = 2.640e-85 Identity = 140/262 (53.44%), Postives = 199/262 (75.95%), Query Frame = 1
Query: 799 DIDLRDANEPLAVTEYVEDLYVFLREREIATQVDRRYMDGQPNVNERMRSILIDWLVEVHLKFKLVPDTLYLTVYLIDKYLELEKVSRQNLQLVGVTAMLLASKYEEIYPPQIRDLVFITDRAYNRDQILEMESAMANALQFRLTVPTIYCFLLRYLKAAHADKKIVQLSCYVAERMLQEVTMLDYLPSIVACCAIYVARKNMGRTCWSPTLEKYTKYRVEQLMPCLTEISRVLNEEGGDLEAVKKKFTSSKFGSVASMEVN 1584
+ID RD+++PL T YV D+YV RE+E+ + V YM+ Q ++NERMRSIL+DWLVEVHLKFKLVP+TLYLT+ +ID++LE E+VSR LQLVGVT++L+ASKYEEI+PP++RDLV+I D+AY + IL+ME + L++ +T+P+ + FL+R+LKA HADKKIVQLSCY+ + LQ +L YLPS +A A+++AR+ +GR WSPTL KY Y E+++P I R + +L+AV KK++SS++G VA+ E++
Sbjct: 113 NIDDRDSDDPLCTTSYVNDMYVHFREKEVFSSVRPIYMENQTHINERMRSILVDWLVEVHLKFKLVPETLYLTINMIDRFLEKERVSRPRLQLVGVTSLLIASKYEEIFPPELRDLVYICDKAYTKQDILQMEELILKTLEYNVTIPSAHAFLVRFLKAGHADKKIVQLSCYILDGTLQSYNLLHYLPSQLAAAAVFIARRVVGRNPWSPTLLKYANYCEEEVIPVARAILREKSTASDELKAVNKKYSSSRYGGVAAYELS 374 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig67.20.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig67.20.2 >prot_P-littoralis_Contig67.20.2 ID=prot_P-littoralis_Contig67.20.2|Name=mRNA_P-littoralis_Contig67.20.2|organism=Pylaiella littoralis U1_48|type=polypeptide|length=423bp MHTRRQVQENSGFGMDENTKPSDLGGVAAPAAAGKAGLGGVAKKGLGGVQback to top mRNA from alignment at P-littoralis_Contig67:128827..139932- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig67.20.2 ID=mRNA_P-littoralis_Contig67.20.2|Name=mRNA_P-littoralis_Contig67.20.2|organism=Pylaiella littoralis U1_48|type=mRNA|length=11106bp|location=Sequence derived from alignment at P-littoralis_Contig67:128827..139932- (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig67:128827..139932- >mRNA_P-littoralis_Contig67.20.2 ID=mRNA_P-littoralis_Contig67.20.2|Name=mRNA_P-littoralis_Contig67.20.2|organism=Pylaiella littoralis U1_48|type=CDS|length=1269bp|location=Sequence derived from alignment at P-littoralis_Contig67:128827..139932- (Pylaiella littoralis U1_48)back to top |