mRNA_P-littoralis_Contig67.130.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig67.130.1 vs. uniprot
Match: A0A6H5JR14_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JR14_9PHAE) HSP 1 Score: 105 bits (262), Expect = 6.500e-25 Identity = 47/62 (75.81%), Postives = 54/62 (87.10%), Query Frame = 1
Query: 4 NLEEKTTVGDVTWKKHFITEYSWTDIRVSILGFVSMCRYLFEDDSRFKVSRPRDTPRYVNPR 189
+L+EKTT+GD TWKKHFITE+SWTDIRV ILGFVSMCRYLFE+DSRFKVS R P ++N R
Sbjct: 594 SLQEKTTMGDETWKKHFITEFSWTDIRVCILGFVSMCRYLFEEDSRFKVSPRRPWPHFINQR 655
BLAST of mRNA_P-littoralis_Contig67.130.1 vs. uniprot
Match: A0A6H5JTX6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTX6_9PHAE) HSP 1 Score: 84.3 bits (207), Expect = 2.210e-18 Identity = 39/63 (61.90%), Postives = 47/63 (74.60%), Query Frame = 1
Query: 1 CNLEEKTTVGDVTWKKHFITEYSWTDIRVSILGFVSMCRYLFEDDSRFKVSRPRDTPRYVNPR 189
+LE + T+GD WK HFIT++SWTDIRV ILG VSMCRYLFE DSRFK+ D P ++N R
Sbjct: 80 ASLEARPTLGD--WKAHFITDHSWTDIRVCILGTVSMCRYLFEKDSRFKIYPLSDVPHFINLR 140
BLAST of mRNA_P-littoralis_Contig67.130.1 vs. uniprot
Match: A0A6H5JRH8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRH8_9PHAE) HSP 1 Score: 86.7 bits (213), Expect = 2.760e-18 Identity = 37/64 (57.81%), Postives = 48/64 (75.00%), Query Frame = 1
Query: 1 CNLEEKTTVGDVTWKKHFITEYSWTDIRVSILGFVSMCRYLFEDDSRFKVSRPRDTPRYVNPRH 192
+LE + T+GD WK HFIT++SWTDIRV ILG VSMCRY+FE+DS FK+ D P ++N R+
Sbjct: 470 ASLEARPTLGDGAWKAHFITDHSWTDIRVCILGTVSMCRYVFEEDSTFKIPPLSDVPHFINLRY 533
BLAST of mRNA_P-littoralis_Contig67.130.1 vs. uniprot
Match: A0A6H5K5I6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K5I6_9PHAE) HSP 1 Score: 70.9 bits (172), Expect = 4.890e-13 Identity = 33/55 (60.00%), Postives = 42/55 (76.36%), Query Frame = 1
Query: 40 WKKHFITEYSWTDIRVSILGFVSMCRYLFEDDSRFKV-SRPRDTPRYVNPRHHCQ 201
WKKHFIT SW D+R+SILGFVSMCRYLFED RF++ S + R+++PR+ Q
Sbjct: 125 WKKHFITHQSWFDLRLSILGFVSMCRYLFEDPERFQIDSLSPNCRRFLSPRNCSQ 179
BLAST of mRNA_P-littoralis_Contig67.130.1 vs. uniprot
Match: A0A6H5K7Z3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K7Z3_9PHAE) HSP 1 Score: 60.8 bits (146), Expect = 3.300e-9 Identity = 23/36 (63.89%), Postives = 30/36 (83.33%), Query Frame = 1
Query: 28 GDVTWKKHFITEYSWTDIRVSILGFVSMCRYLFEDD 135
G W HFIT+YSWTD+R +ILGFV+MCRY+F+D+
Sbjct: 524 GPKEWANHFITDYSWTDMRTTILGFVAMCRYVFKDE 559
BLAST of mRNA_P-littoralis_Contig67.130.1 vs. uniprot
Match: A0A6H5JNK0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNK0_9PHAE) HSP 1 Score: 52.0 bits (123), Expect = 2.130e-7 Identity = 21/36 (58.33%), Postives = 29/36 (80.56%), Query Frame = 1
Query: 1 CNLEEKTTVGDVTWKKHFITEYSWTDIRVSILGFVS 108
+LE + T+GD TW+ HFIT++SWTDI+V ILG V+
Sbjct: 27 ASLEARPTLGDGTWEAHFITDHSWTDIQVCILGTVA 62
BLAST of mRNA_P-littoralis_Contig67.130.1 vs. uniprot
Match: A0A6H5KH17_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KH17_9PHAE) HSP 1 Score: 47.8 bits (112), Expect = 5.160e-5 Identity = 20/35 (57.14%), Postives = 26/35 (74.29%), Query Frame = 1
Query: 1 CNLEEKTTVGDVTWKKHFITEYSWTDIRVSILGFV 105
+LE + T+G WK +FIT++SWTDIRV ILG V
Sbjct: 67 ASLEARPTLGGRAWKAYFITDHSWTDIRVCILGTV 101 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig67.130.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 7
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig67.130.1 >prot_P-littoralis_Contig67.130.1 ID=prot_P-littoralis_Contig67.130.1|Name=mRNA_P-littoralis_Contig67.130.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=67bp CNLEEKTTVGDVTWKKHFITEYSWTDIRVSILGFVSMCRYLFEDDSRFKVback to top mRNA from alignment at P-littoralis_Contig67:631898..632099+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig67.130.1 ID=mRNA_P-littoralis_Contig67.130.1|Name=mRNA_P-littoralis_Contig67.130.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=202bp|location=Sequence derived from alignment at P-littoralis_Contig67:631898..632099+ (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig67:631898..632099+ >mRNA_P-littoralis_Contig67.130.1 ID=mRNA_P-littoralis_Contig67.130.1|Name=mRNA_P-littoralis_Contig67.130.1|organism=Pylaiella littoralis U1_48|type=CDS|length=201bp|location=Sequence derived from alignment at P-littoralis_Contig67:631898..632099+ (Pylaiella littoralis U1_48)back to top |