mRNA_P-littoralis_Contig67.104.1 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig67.104.1
Unique NamemRNA_P-littoralis_Contig67.104.1
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
[Close]
BLAST of mRNA_P-littoralis_Contig67.104.1 vs. uniprot
Match: D7FKR8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FKR8_ECTSI)

HSP 1 Score: 640 bits (1652), Expect = 8.790e-225
Identity = 327/406 (80.54%), Postives = 355/406 (87.44%), Query Frame = 3 
Query:  147 IPISATAFS-LSNSRGTAFSASSEVMSRVSQATSRYRNGWTSRPAGTLQVLSMSFGAGATNRYSWDETDKEVNVKARLPAWAKGKSVVLDLTQTGIKLSLKEEEGSPIIEGSLRGAITLDGSYWTMETLDDNGKMLYLTLEKAPQLTGLGPWMGVVQGEKQVDSNYPEEEKAAEIASMARDEKESQGAQSGGPRYTGVVDEDGFCRDLLAVQGMSGAMVARQVPVNGNALFSAVAMSRWFIESGEHSKVSSPEIEAIAKDLRQKTLDYLTGAYKANDQIYLSGEQMAARPFVASQAKANGMADGDEYLKAMRDDTMWGGGGEVVGLTHVLKRPIHVYDLVSTGRRFGLRVIGRFGAPRYSAEKPIHIVSTYARFPDLDPGSQSAEGNHYVALYHYEDVPEKNKEKL 1361
            +P+S TAFS +S  R   FS   EV  +V    SRYR G  SRP     +  MSFGAGAT+RYSWDETDKEVNVKARLPAWAKGKSVVLD+T T +KL LKEEE +PIIEG LRGAI +DGSYWTMETLDDNGKMLYLTLEKAPQLTGLGPWMGVVQGEKQV+S+YPEE+KAAEIA+MA +EK++Q A+SG P++TGVVDEDGFCRDLLAVQ MSGAMVARQVPVNGNALFSAVA+S+WFIESGEH   SSPEIE IAKDLRQKTLDYLT AYK N  IY+SGE M ARPFVA+QAKAN MADGDEYL+AMRDDTMWGGGGEVVGLTHVLKRP+HVYDLVSTGRRFGLRVIGRFGAP Y+ E+PIHIVSTYARFPDLDPGSQSAEGNHYVALY YEDVPEKNK KL
Sbjct:   11 VPVSVTAFSFVSKLRPNQFSL--EVRPQVM---SRYRTGRASRPRTLRPLWMMSFGAGATDRYSWDETDKEVNVKARLPAWAKGKSVVLDMTNTHVKLFLKEEESTPIIEGDLRGAILMDGSYWTMETLDDNGKMLYLTLEKAPQLTGLGPWMGVVQGEKQVNSDYPEEDKAAEIAAMAHEEKKAQDAESGTPKHTGVVDEDGFCRDLLAVQAMSGAMVARQVPVNGNALFSAVAISKWFIESGEHPDASSPEIETIAKDLRQKTLDYLTKAYKENAPIYMSGEYMDARPFVAAQAKANSMADGDEYLQAMRDDTMWGGGGEVVGLTHVLKRPLHVYDLVSTGRRFGLRVIGRFGAPLYAKERPIHIVSTYARFPDLDPGSQSAEGNHYVALYPYEDVPEKNKGKL 411
[Close]
BLAST of mRNA_P-littoralis_Contig67.104.1 vs. uniprot
Match: D8LB24_ECTSI (OTU domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LB24_ECTSI)

HSP 1 Score: 142 bits (359), Expect = 1.800e-33
Identity = 76/200 (38.00%), Postives = 111/200 (55.50%), Query Frame = 3 
Query:  723 RYTGVVDEDGFCRDLLAVQGMSGAMVARQVPVNGNALFSAVAMSRWFIESGEHSKVSSPEIEAIAKDLRQKTLDYLTGAYKANDQIYLSGEQMAARPFVASQAKANGMADGDEYLKAMRDDTMWGGGGEVVGLTHVLKRPIHVYDLVSTGRRFGLRVIGRFGAPRYSAEKPIHIVSTYARFPDLDPGSQSAEGNHYVALY 1322
            R++  +  DGF  D  AVQG+S  M  RQVP +GN LF A++       +G H  +   E+   +  LR+  +DYL    K    +YL  E+      + S   A      + Y + MR  ++WGGG E+V L++ L RPIHVY+L S G  F  R +  FG+P +  ++ IHI+S  +RFP+L PG Q A GNH++AL+
Sbjct:   26 RHSAKIKRDGFLTDSFAVQGISTNMAVRQVPGDGNCLFHAISACLDHACNGTHPSLDLSELMPKSAALRKVAVDYLVDNLKKT--LYLEKEESVPVYELLSVVAAQYNMTAEHYCEVMRQSSVWGGGPEIVALSNALCRPIHVYELASNGVSFCFRRMACFGSPSFDDKQAIHILSADSRFPNLKPGRQLANGNHFLALF 223
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BLAST of mRNA_P-littoralis_Contig67.104.1 vs. uniprot
Match: A0A7S1V4T9_9STRA (Hypothetical protein n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1V4T9_9STRA)

HSP 1 Score: 132 bits (332), Expect = 3.220e-31
Identity = 70/186 (37.63%), Postives = 114/186 (61.29%), Query Frame = 3 
Query:  804 RQVPVNGNALFSAVAMSRWFIESGEHSKVSS-PEIEAIAKDLRQKTLDYLTGAYKANDQIYLSGEQ-MAARPFVASQAKANGMADGDEYLKAMRDDTMWGGGGEVVGLTHVLKRPIHVYDLVSTGRR---FGLRVIGRFGAPRYSAEKPIHIVSTYARFPDLDPGSQSAEGNHYVALYHYEDVPEK 1346
            RQVP +GN LF A+++  +  E G H       +++  +K LRQ+ +DY+    K    ++L   + + A+  + S A   G+  GDEYL+ MR D+ WGGG E+V L+++L+RPIHVY+L +  R    F LR +  FG+P++  ++ +HI+S  +RFPD+ PG Q  EGNH++A++     P++
Sbjct:    2 RQVPGDGNCLFHALSVCLYKSEHGCHFPFGDLGKLQQCSKSLRQRAVDYVKK--KPRRLLFLQAREFLRAKDLIDSSAAQYGVT-GDEYLETMRQDSTWGGGPEIVALSNMLRRPIHVYELYAPNRNVQDFRLRRMCCFGSPKFDRQEALHILSADSRFPDVQPGKQKKEGNHFLAIFPQAKKPKR 184
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BLAST of mRNA_P-littoralis_Contig67.104.1 vs. uniprot
Match: A0A835YZQ7_9STRA (OTU domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YZQ7_9STRA)

HSP 1 Score: 130 bits (326), Expect = 3.060e-29
Identity = 74/203 (36.45%), Postives = 112/203 (55.17%), Query Frame = 3 
Query:  723 RYTGVVDEDGFCRDLLAVQGMSGAMVARQVPVNGNALFSAVAMSRWFIESGEHSKVSSPEIEAIAKDLRQKTLDYLTGAYKANDQIYLSG-EQMAARPFVASQAKANGMADGDEYLKAMRDDTMWGGGGEVVGLTHVLKRPIHVYDLVS-TGRRFGLRVIGRFGAPRYSAE-KPIHIVSTYARFPDLDPGSQSAEGNHYVALY 1322
            R++  +  DGF  +   V+G+   M  RQVP +GN LF +++      ++  H  +   ++   +  LR+  +DYL      +  +YL G E +     +   A    M   D Y K MR   +WGGG E+V L++ L+RPIHVY+L +  GRRF  R +  FG+P +  E +PIHI+S  ARFP+L PG Q A GNH++ L+
Sbjct:   28 RHSAQIQRDGFLTEAFPVEGLPVQMQVRQVPGDGNCLFHSISACLEHADTSSHPSLHLNDLLPKSAVLRKMAVDYLVA--DPDRVLYLEGGETVPVNELLTVVATQYNMTV-DAYCKHMRLPAVWGGGPEIVALSNCLRRPIHVYELAAGAGRRFCFRRMACFGSPLFDGECEPIHILSADARFPNLAPGQQLANGNHFLCLF 227
[Close]
BLAST of mRNA_P-littoralis_Contig67.104.1 vs. uniprot
Match: A0A7S3L1U5_9STRA (Hypothetical protein n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3L1U5_9STRA)

HSP 1 Score: 123 bits (308), Expect = 1.440e-27
Identity = 75/217 (34.56%), Postives = 119/217 (54.84%), Query Frame = 3 
Query:  747 DGFCRD--------------LLAVQGMSGAMVARQVPVNGNALFSAVAMSRWFIESGEHSKVSS--PEIEAIAKDLRQKTLDYLTGAYKANDQIYLSG-EQMAARPFVASQAKANGMADGDEYLKAMRDDTMWGGGGEVVGLTHVLKRPIHVYDLV--------STGRRFGLRVIGRFGAPRYSAEKPIHIVSTYARFPDLDPGSQSAEGNHYVALY 1322
            DGF RD              L   Q +      RQVP +GN LF ++++      +G H  VS    ++   ++ LRQ+ +D L   +K   +++L G E + +   V + A+  G+   +EY +AM  D +WGGG E+V L+++L+RPIHVY+L         S+G  F LR +  FG+PR+   + +HI+S  +RFPDL PG Q + GNH++A++
Sbjct:   27 DGFLRDEFRRIPGEWEEEVRLRTRQRLETKCRIRQVPGDGNCLFHSISLCLQHATNGTHWDVSKCLEDLYTHSQTLRQQAVDCLRQPHK---RLFLQGRETLKSGELVQAAAQQYGLTS-EEYCQAMEQDCVWGGGPEIVALSNLLQRPIHVYELATSSSSSKPSSGNTFVLRRMACFGSPRFDRREALHILSADSRFPDLLPGEQLSAGNHFLAVF 239
[Close]
BLAST of mRNA_P-littoralis_Contig67.104.1 vs. uniprot
Match: B7G567_PHATC (Predicted protein n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B7G567_PHATC)

HSP 1 Score: 124 bits (311), Expect = 2.010e-27
Identity = 68/193 (35.23%), Postives = 119/193 (61.66%), Query Frame = 3 
Query:  804 RQVPVNGNALFSAVAMSRWFIESGEHSKVSSPE---IEAI---AKDLRQKTLDYLTGAYKANDQIYLSG-EQMAARPFVASQAKANGMADGDEYLKAMRDDTMWGGGGEVVGLTHVLKRPIHVYDLVSTGRR----------FGLRVIGRFGAPRYSAEKPIHIVSTYARFPDLDPGSQSAEGNHYVALYHYE 1331
            RQVP +GN LF ++++   +  +G H  +++ +   ++A+   ++ LR+K ++ L  + +   +++L G E + A   V + A+   ++  +EY  +M+ D++WGGG E+V L +VL+RPIHVY+L ST  R          F LR +  FG+P++   +P+HI+S  +RFPD+ PG Q A GNH++AL+ +E
Sbjct:   94 RQVPGDGNCLFHSISLCLQYAANGTHWDLNTSDRRGLDALYEHSQTLRRKAVEVLQHSQR---RLFLQGRESLRAHELVQAAAQQYNLSP-EEYCASMQQDSVWGGGPEIVALCNVLQRPIHVYELASTTTRSSRNDDERQSFVLRRMACFGSPKFDRRQPLHILSADSRFPDVTPGQQLASGNHFLALFPHE 282
[Close]
BLAST of mRNA_P-littoralis_Contig67.104.1 vs. uniprot
Match: A0A1Z5JTL4_FISSO (OTU domain-containing protein n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JTL4_FISSO)

HSP 1 Score: 107 bits (268), Expect = 6.410e-22
Identity = 69/225 (30.67%), Postives = 115/225 (51.11%), Query Frame = 3 
Query:  735 VVDEDGFCRDLL--------------AVQGMSGAMVARQVPVNGNALFSAVAMSRWFIESGEHSKVSS--PEIEAIAKDLRQKTLDYLTGAYKANDQIYLSG-EQMAARPFVASQAKANGMADGDEYLKAMRDDTMWGGGGEVVGLTHVLKRPIHVYDLV--STGRR----------FGLRVIGRFGAPRYSAEKPIHIVSTYARFPDLDPGSQSAEGNHYVALY 1322
            ++DE GF + L                V   +     RQVP +GN LF ++++      +G H  + +   E+   ++ LR K +  L    +   +++L G E M A   V S A+   +   +EY   M +D +WGGG E+V L+++L+RPIHVY+L   S G            F L+ +  FG+PR+  ++ +HI+S  +RFPD+ PG Q   GNH+++++
Sbjct:   54 LIDEKGFLKGLFRRKKGDWEEEFPMRTVYHTNHPCQIRQVPGDGNCLFHSLSLCLQHAVNGTHWDMPNRLDELYEHSRSLRAKAVACLR---QNKRKLFLQGKESMRAIELVTSAAQQYDLTP-EEYCATMEEDCVWGGGPEIVALSNILQRPIHVYELAMESPGAEDATDQPKKPTFILKRMACFGSPRFDGKRALHILSADSRFPDIQPGEQMVAGNHFLSVF 274
[Close]
BLAST of mRNA_P-littoralis_Contig67.104.1 vs. uniprot
Match: A0A7S3Q5V5_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3Q5V5_9STRA)

HSP 1 Score: 97.1 bits (240), Expect = 2.510e-17
Identity = 58/189 (30.69%), Postives = 88/189 (46.56%), Query Frame = 3 
Query:  963 KANDQIYLSGEQMAARPFVASQAKANGMADGDEYLKAMRDDTMWGGGGEVVGLTHVLKRPIHVYDLVS--------------------------------------------TGRRFGLRVIGRFGAPRYSAEKPIHIVSTYARFPDLDPGSQSAEGNHYVALYHYEDVPEKNKEKL*PLKQSGSLQLR 1397
            K+N  ++L G +      +   A +     G EY   M+ + +WGGG E+VGL + LKRPIHVY+L+S                                            T   F LR +  FG+P++   +P+HI+S   RFPDL PG Q++ GNH++AL+ Y    +  K+K  PL +S + + R
Sbjct:  271 KSNKPLFLQGSEFLRPKELLHVASSQYGMSGQEYCDQMKHNGVWGGGPEIVGLCNYLKRPIHVYELISMKPKCKIKIRPRGYGLLGHKRSPSGEGLEDVEYSDDCSHGTTSSTKPEFRLRRMACFGSPKFDHREPLHILSADCRFPDLTPGLQASAGNHFMALFPYSSPLKIKKQK--PLSRSINSRRR 457
[Close]
BLAST of mRNA_P-littoralis_Contig67.104.1 vs. uniprot
Match: A0A0F7UFM2_NEOCL (Cysteine protease domain containing protein,putative n=2 Tax=Neospora caninum (strain Liverpool) TaxID=572307 RepID=A0A0F7UFM2_NEOCL)

HSP 1 Score: 75.1 bits (183), Expect = 7.520e-11
Identity = 62/221 (28.05%), Postives = 98/221 (44.34%), Query Frame = 3 
Query:  768 LAVQGMSGAMVARQVPVNGNALFSAVAMSRWFIESGEHSKVSSPEIEAIAKDLRQKTLDYLTGAYKANDQIYLSGEQMAARPFVASQAKANGMADGDEYLKAMRDDTMWGGGGEVVGLTHVLKRPIHVYDLVSTGRRFG---------------------------------LRVIGRFGAPRYSAEKPIHIV--STYARFPDLDP-GSQSAEGNHYVALY 1322
            L V+ M   M AR+VP +G  LF++VA   W+     H+ ++ P    +   LRQ  +D L     +   + L G+++  R  + + A A+       Y + MR    WGGG E+V L+H L+R I VY++     R G                                 L+VI   G P+  AE+P+HI+  S+ A    L P   Q+A+  H++ L+
Sbjct:  120 LEVRDMPYRMHAREVPGDGACLFASVAACLWWSAFETHADLNDPAFLDMIGSLRQLAVDTLQDTNVST--LVLEGDEVLPRSSLVNLAAADYNTTPAAYCERMRLPNTWGGGPEIVALSHALRRVIVVYEVHDPSLRSGNSQGSSAHCMHPVCLGQLSSSDGTAQNAPNQTALKVIACLGFPQNVAEEPLHILFTSSAACSTGLRPHAGQTAD--HFLPLF 336
[Close]
BLAST of mRNA_P-littoralis_Contig67.104.1 vs. uniprot
Match: A0A7S2FV93_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2FV93_9STRA)

HSP 1 Score: 69.7 bits (169), Expect = 4.840e-10
Identity = 40/122 (32.79%), Postives = 71/122 (58.20%), Query Frame = 3 
Query:  324 NRYSWDETDKEVNVKARLPAWAKGKSVVLDLTQTGIKLSLKEEEGSPIIEGSLRGAITLDGSYWTMETLDDNGKMLYLTLEKAPQLTGLGPWMGVVQGEKQVDSN--YPEEEKAAEIASMAR 683
            + YSW +   ++ V   +P   KGK +V+D+TQT +K+ LK +E  PI+EG+L   + +D S+WT+E    + K + +TL+K+ Q+     W  VV+G  ++++    PE  K +++    R
Sbjct:   25 DNYSWTQQLSDLQVVVPVPPGTKGKQLVVDITQTKLKVGLKGQE--PILEGTLTKRVIVDDSFWTLE----DSKEVVVTLQKSNQMEW---WKAVVEGAPEINTQKVQPENSKLSDLDGETR 137
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig67.104.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 18
Match NameE-valueIdentityDescription
D7FKR8_ECTSI8.790e-22580.54Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D8LB24_ECTSI1.800e-3338.00OTU domain-containing protein n=2 Tax=Ectocarpus T... [more]
A0A7S1V4T9_9STRA3.220e-3137.63Hypothetical protein n=1 Tax=Grammatophora oceanic... [more]
A0A835YZQ7_9STRA3.060e-2936.45OTU domain-containing protein n=1 Tax=Tribonema mi... [more]
A0A7S3L1U5_9STRA1.440e-2734.56Hypothetical protein n=1 Tax=Amphora coffeiformis ... [more]
B7G567_PHATC2.010e-2735.23Predicted protein n=1 Tax=Phaeodactylum tricornutu... [more]
A0A1Z5JTL4_FISSO6.410e-2230.67OTU domain-containing protein n=1 Tax=Fistulifera ... [more]
A0A7S3Q5V5_9STRA2.510e-1730.69Hypothetical protein n=1 Tax=Chaetoceros debilis T... [more]
A0A0F7UFM2_NEOCL7.520e-1128.05Cysteine protease domain containing protein,putati... [more]
A0A7S2FV93_9STRA4.840e-1032.79Hypothetical protein n=1 Tax=Florenciella parvula ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig67contigP-littoralis_Contig67:528599..536525 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D7FKR8
Model size2047
Max annot lvl2880.D7FKR8|-
Hectar predicted targeting categorychloroplast
Exons11
Evalue1.54e-229
EggNOG OGs2BVCW@1|root,2S253@2759|Eukaryota
Ec32 ortholog descriptionHSP20-like chaperone
Ec32 orthologEc-21_001870.1
DescriptionOTU-like cysteine protease
Cds size1251
COG categoryS
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig67.104.1prot_P-littoralis_Contig67.104.1Pylaiella littoralis U1_48polypeptideP-littoralis_Contig67 528712..535842 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791396.7190728-UTR-P-littoralis_Contig67:528598..5287111680791396.7190728-UTR-P-littoralis_Contig67:528598..528711Pylaiella littoralis U1_48UTRP-littoralis_Contig67 528599..528711 +
1680791396.875967-UTR-P-littoralis_Contig67:535842..5365251680791396.875967-UTR-P-littoralis_Contig67:535842..536525Pylaiella littoralis U1_48UTRP-littoralis_Contig67 535843..536525 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791396.7332814-CDS-P-littoralis_Contig67:528711..5289351680791396.7332814-CDS-P-littoralis_Contig67:528711..528935Pylaiella littoralis U1_48CDSP-littoralis_Contig67 528712..528935 +
1680791396.750195-CDS-P-littoralis_Contig67:531020..5311561680791396.750195-CDS-P-littoralis_Contig67:531020..531156Pylaiella littoralis U1_48CDSP-littoralis_Contig67 531021..531156 +
1680791396.7628896-CDS-P-littoralis_Contig67:531460..5315091680791396.7628896-CDS-P-littoralis_Contig67:531460..531509Pylaiella littoralis U1_48CDSP-littoralis_Contig67 531461..531509 +
1680791396.7732055-CDS-P-littoralis_Contig67:531816..5319501680791396.7732055-CDS-P-littoralis_Contig67:531816..531950Pylaiella littoralis U1_48CDSP-littoralis_Contig67 531817..531950 +
1680791396.7855847-CDS-P-littoralis_Contig67:532386..5324321680791396.7855847-CDS-P-littoralis_Contig67:532386..532432Pylaiella littoralis U1_48CDSP-littoralis_Contig67 532387..532432 +
1680791396.7993367-CDS-P-littoralis_Contig67:532666..5327731680791396.7993367-CDS-P-littoralis_Contig67:532666..532773Pylaiella littoralis U1_48CDSP-littoralis_Contig67 532667..532773 +
1680791396.8086944-CDS-P-littoralis_Contig67:533633..5337561680791396.8086944-CDS-P-littoralis_Contig67:533633..533756Pylaiella littoralis U1_48CDSP-littoralis_Contig67 533634..533756 +
1680791396.8181164-CDS-P-littoralis_Contig67:534072..5342101680791396.8181164-CDS-P-littoralis_Contig67:534072..534210Pylaiella littoralis U1_48CDSP-littoralis_Contig67 534073..534210 +
1680791396.8326092-CDS-P-littoralis_Contig67:534708..5348151680791396.8326092-CDS-P-littoralis_Contig67:534708..534815Pylaiella littoralis U1_48CDSP-littoralis_Contig67 534709..534815 +
1680791396.8496156-CDS-P-littoralis_Contig67:535459..5355431680791396.8496156-CDS-P-littoralis_Contig67:535459..535543Pylaiella littoralis U1_48CDSP-littoralis_Contig67 535460..535543 +
1680791396.8591871-CDS-P-littoralis_Contig67:535739..5358421680791396.8591871-CDS-P-littoralis_Contig67:535739..535842Pylaiella littoralis U1_48CDSP-littoralis_Contig67 535740..535842 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig67.104.1

>prot_P-littoralis_Contig67.104.1 ID=prot_P-littoralis_Contig67.104.1|Name=mRNA_P-littoralis_Contig67.104.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=417bp
MMWLAAHVGILIPISATAFSLSNSRGTAFSASSEVMSRVSQATSRYRNGW
TSRPAGTLQVLSMSFGAGATNRYSWDETDKEVNVKARLPAWAKGKSVVLD
LTQTGIKLSLKEEEGSPIIEGSLRGAITLDGSYWTMETLDDNGKMLYLTL
EKAPQLTGLGPWMGVVQGEKQVDSNYPEEEKAAEIASMARDEKESQGAQS
GGPRYTGVVDEDGFCRDLLAVQGMSGAMVARQVPVNGNALFSAVAMSRWF
IESGEHSKVSSPEIEAIAKDLRQKTLDYLTGAYKANDQIYLSGEQMAARP
FVASQAKANGMADGDEYLKAMRDDTMWGGGGEVVGLTHVLKRPIHVYDLV
STGRRFGLRVIGRFGAPRYSAEKPIHIVSTYARFPDLDPGSQSAEGNHYV
ALYHYEDVPEKNKEKL*
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mRNA from alignment at P-littoralis_Contig67:528599..536525+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig67.104.1 ID=mRNA_P-littoralis_Contig67.104.1|Name=mRNA_P-littoralis_Contig67.104.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=7927bp|location=Sequence derived from alignment at P-littoralis_Contig67:528599..536525+ (Pylaiella littoralis U1_48)
CCCTCCCCGCCTTATTCCCACGTCAGCTCCTTGCATCCTTGCACACCTGC
TGTTCAATTGGTGCCTTTCGTGTGTGTAGCGTAGCTGTTGAAGTCCCTGA
GACTCTCGAGCCCATGATGTGGTTAGCGGCTCATGTTGGCATTCTTATCC
CAATTTCGGCGACAGCCTTCTCTTTGAGCAATAGCCGAGGCACTGCCTTC
TCGGCAAGCTCTGAGGTGATGTCACGTGTCAGTCAGGCCACATCGCGATA
TCGGAATGGGTGGACAAGTCGACCAGCAGGCACTTTGCAGGTGTTGTCGA
TGAGTTTTGGAGCTGGTGCAACCAATCGGTATTCCTGGTGAGACCCAAGA
CTTCACCGTGCTCTTTGCAATAAGGCATTGCTTCACAAGCAACCGAATTC
ACCGCATATGTAGGTATGTGAGCAGGTGCCCGCGTTTTGTCCTTTCTTGT
GACAACTCATTTGCGACACAGCGCTTACAGCTGCAGCGTTATTTGTTATT
TACTGCCGTGCCCAACATGGAGGACTCGGGCAAGACATGGTGATTGTCAA
GCAGCACTGGCTGTGGGTTTCGTTGATTGTTTCGTTCTCACTGTCTCACT
GCTGTACTGCCTGCGGCTATTGACGATTTGATCTATTTTCTCCTCTTTAT
CTACTACTTGTTCCGGCCGTTGTGCGTTGCACAGAAGTAGCTTCGAAATA
CAGGCAGCAAGAATCAAACAGCAAATTCGTTGAACTCTGCATGTAGGCTG
CAACCACGACTGCTTATGTATTAACTCTCGTAGACTGAAGATGATGTTTT
AGTCGAATGGGTGCCTTCACGGTCGCAGCATTCTTTGAATCTACTGCACA
CTGACGTGGTACATTACGATGCGGCGTATCTTTTTGGCCTACATTTCGCT
TTTCTTGATATTTCTGTGTTTTTTTCGGATCTACCCTGCGGCGGTATGAT
AGAGCTCAGATTTTTTTTCGAGACCATGGGACAACGGGCTACCGTATAAA
TATCATCACCGGGTGTGTTATTCTGTGGGGGGGGTGTCATCTTAAGTAAC
CCGTGTGATGGAGTGCAGGTCGCGGGAGCCATGAATGGGGCGTGATAAGC
GTGGGGTTTGATAACACTGCCGCACTCTCTTGCAGGGGGTTTGGTCATGA
ATGGGGCGTGATAATCATGGGGTGTTACAAAACTGCCGCACTCTCTGCAG
GGGGTTTGGTCATGAATGGGGTGTGATTGCCATGGGTTTATGATAACCAC
GGGGAGTTATAACACTGCCTCACTCTTTGCAAGGCGTCTGACCACAAGTG
GGTGTGACAACCATGGATGTGATAACACTGCGGGGTGCGATACCCGTCAC
ACTGCCGGCAAAGAGTTTGCGTACTGCTGCTACACTTGCAAGGGTTGTGG
TATTGAGGAGGTGTGACAAAAGTCAACTTCCTACCAGTACAGCAGTGAAA
AAGTTTTGCGGGGGGGGCTGCTACCGGTAACAGGGGAGGCGATAGACCTC
TTGAGCCCAACACCCCTTGAAATGGACGCCAACAGCCCCTTAATCGACAA
CAGCACAATGCGATGTACCTACTCCGTTGTGTCATCCGTGAATACGACCT
GAAAAAACAATACAAGATGCCAAGAAGGCAGGAGAGCAAGCACGTCCATG
TTATTGTTGGAGGTCTCCCTATGGGTGCTTCCCTCGCGGAAAGAGGGTGT
GTCGTGTGGTGTGTGTTCCCTGCTGGGTCTCGTGAGCGTCACCACCCACC
ACCCCACCACACAGGTGATGGTAGGAGGGGCGCCGTGACTGCATGCGGCG
TGACCTCAGGGGTGTGTTACCTCATGTAACCCGGGTGATGAATGGGCCCC
TCGAAAATGTAAGAATAGCACCGAGTGTGTTATTCTTGGGGTGTGTGTAA
TCTTATGTGGGTGTGTTATCTTCAGTAGAATATGGTGGGTCGATGAGCTC
ATGTAGGAACCAACGTTACAGGTGGCTTAAATGCTGCATCATCCACATAT
CGAACGAGGCGTGGCATAAGATACCGCGAGGACAACCCCCAGACCGAATT
CGAAATGTAAACTGTACGTTGCCGGAAATTTCTCGATGAATTGGTCCCAA
CGCCGCCCCGTGCGGCACCGACTGTTCGAGCGTTGAATATCGGTCGAGGG
GGCCCCGTGTTATCTTCCGCAACCTTGCAGGGATATTTGTTCATGACTCA
GGTTTTAGAGACAAGTGCTGAACTGCATTGCTCGAGCGCGGCTATAGCAG
GAGAAGGGCAGATGCGAACGTAGAGCTAATGTGCACGTTAGATCTGGACC
TGTTGTGACAAAAAAATAAACGTGGAGACCCGCGGCGTATACCACTTCCT
TTCTTGCTTTGCTACTACTGCACACCACCTTTCATACCTGTGGACCACGG
CTATCGAACACGTTTTTTTCAGGGACGAGACGGACAAGGAAGTGAATGTC
AAGGCGCGGTTACCAGCGTGGGCCAAGGGCAAGTCGGTTGTCCTCGACCT
GACCCAAACCGGCATCAAACTCTCTCTTAAGGAAGAGGAGGGATCTCCCA
TTATCGAGGTACGTAAAACACAATGTACTGTCATGAAAAAAACATATACG
AAGTACAAATCTGGTACAAGTATGTTATCACAAACCGCTTTTGGCTGCTC
TGGAGCAGCTTCTTGCTATTGTTGGTCGTTGTCAATACAAGGCGCCTCCG
AACTCGTCTACTGCCGGAGTAATCGAGCAGACCAAAGGATGCGCCATCAA
AATGGTCGCGAGACGGGCTGGCGTTCTTTACTCGTGTTTGAATTGGGCGC
TGTGACGAAGCACAGCAGTCGAGTGGTGTAAGCATCGATTTTGTGTCTTC
CATTGCTGGCAGGGTAGCTTGCGAGGAGCCATCACCCTGGATGGCAGCTA
TTGGACGATGGGTGAGAAGGCGATTGAATTTTCACATACTCTGGTGTCTC
AACCGAAGTCACAGTATATTTCTCATCTTTGTACAAGAAAGCGTTGACCC
AGACTATCATGAAACATAATTGGGGGGCCTTTGACGAACGATATCAGGTT
TTGGTTGCCGTGGATTTTAACCTGGCGTCACAGCTACCATTGCTGTGGGT
TACTGAGTCAGTCGACGCTGTTGGTAGACACGATATGATGTGATGTTCAG
TCTTGCGCCCTGATCAATGCCACCGTCTTATTTTGACATGTTGCCATCTT
GGCGTAATGCGTGAATAGAGACCCTCGATGATAACGGTAAGATGCTTTAC
CTTACGCTGGAGAAGGCACCGCAGCTTACCGGGCTGGGTCCGTGGATGGG
TGTCGTCCAGGGGGAGAAGCAGGTGGACTCCAACTACCCAGAGGAAGAAA
AGGTCAGATATTGTTTTTGGTGCTCCAAGATTTGGCAACTTTCGCACCTT
GGACGCAGATTGGATTGCTCAGGAAGGGATGCCGTTATGAAGGGGTGCTG
TCGCTATTTCGGAACGGCGCGGCTCAATGGTTTTCTCAAGGACCCACGAG
CAATTTTGCTATTGCGCTGAAAGAATAAGCGCACTTTTCGCAGTATTTGC
CTTGCAACACTGGTTGAGAAACGCTCCGGTCGAGCTGCGACCGAATAGCA
TTTCGCAGGTATTAGTACCTCAGCGGCTGCAGGTGTGAATGAACCCCATA
CAGAGGTATACTTGCGTATAGGTTTTGTTATTCGAAACTTTGACGTAAAT
GATGCACTATACCATTCTGCCCAACTTAGTTACGTGATTTGCTGTCTATT
CTGGCGCACGTCTGTCAAACTCTTTCCACCGATCGCAGGCGGCGGAAATA
GCTTCCATGGCCCGCGACGAGAAGGAATCACAAGGTGAAGATGTTTTGAC
AATATTGCACAATTGTACCCTTGTGGCGCTTGTTTGAATGTATCAGTTTG
ACTGTCAGCCACGGCAATCACCAAACCTCGAGTACCAATCACTTGTTGGT
TGTGGGAAGCAAAGTATAGGTATTCCTCGCGGATGTGAGCAAAAGTCAGG
CTGAGCACTCGCTGTTGGACATTCCGTGAGGCTCTCTCCCGCAGCGTTCC
CCTGATTTTGTACGACAGGAGCTCAATCGGGCGGACCGCGCTACACTGGA
GTCGTGGACGAGGATGGATTTTGCAGAGATCTTCTGGCCGTGCAGGGAAT
GAGTGGAGCCATGGTTGCACGACAGGTAGGTGAGCGGAGCGCATCGGTGC
CCTTTTGATGTTTCCATTTTCAAAGTTCATACGTGCCCATGGATTGGTTT
GTCGGGTCTGGTCGTGTTATTCTTCGCAGCGGAGGGTGATGTGTCTGAAG
GTCACAGCAGTAAACATTTGAGCCAAAGTTTTTAGAACGGTAATAATTTC
TAGCCGATACAGAGTGGTTCAATTGATCATACTCGAAATCTTCTGACACT
TACGCTTGAGTTCGAATCCCGGTGCATCAACACGATCCGGAATTCTTCTC
ATGTGATGCGTGAGGGTGGACAACGATTAATTCGTGAGTAAACAAAAGTC
GAAGTGTAGACGAGGGAGAGGGAAGGCTGTACCCTTTCTCGCGAGAAAAA
ATGAAGGCAAGTACCGCAGAGGGAAGTGGAGAAAGAAAATAAATAAATAA
AAAAAAAACTCCTGTGTTGACTTCCTACTGTGTGACCCCGGTTGAAGCGT
CCACCTACCCGAAAGGTGTGGACTGGCGCGTAATTAAAGGGATGTCAACA
CACACATACACACACTAGTGGGCGGTGCCAACCCATTTGCAATATTTCCC
GACATGACGAACGTCAACACTTAGCATCTGTTGAGGTCAGCATGTACTAG
GTGCCGCTTCCGAAGACGTGTAAGAGGTCGAACTTCCAACGACAGCACAT
CCACAGCAAAAGTACTGCGAGCATACAGGAAGAAAGTAGAAGCATGCACT
CCTTGTTGCCTGTTAATCCCAGCATGCTTAGGGCATGATTAGTCACATGA
GAGAAATAGTACGATTTCGGTTGGGCCAGGTGAGAACAAACTGTTTGGCT
TACGTTTCGCGCGACTCTATTTTATTGGTTAACAGGTACCGGTCAACGGG
AACGCCTTGTTCTCCGCGGTGGCGATGTCTCGATGGTTCATTGAAAGTGG
TGAACACTCAAAGGTCTCGTCGCCGGAGATCGAAGCAATAGCCAAGGATT
TGCGGCAGGTGCGATTCGTCGCTCGATAGCACAAATGTCTCCTTGGTTGT
CTAAAGAACACGCACGCGGGAGGCCTAGGGTTATTGTTTTCGTTGACGTG
TGCTAGTCAGGCTCACTCTGTCGATTTTTCCCGTGTAACGTGGTGCAAGG
CTATAAGTTCTTGCGGCGTTGCCGTTGGTAAGTAAGCAGGTGGAATCCAG
CGCCTCTACCCCACTGATGTTTGTTTTTAGCCCCGACTATTACAGCGGCA
GCATGCAATATCCGGAATTTCATGTCCCCCATTTGCGCCGTCCTCGCGGC
AATCGACGTGTTTCCACCATGCAGAAAACGCTGGATTATCTCACGGGAGC
ATACAAAGCGAACGATCAAATTTACCTGTCGGGTGAGCAAATGGCGGCCA
GGCCGTTCGTCGCGTCCCAGGCTAAAGCTAACGGCATGGCGGACGGAGAC
GAGTATTTAAAGGTACGCCAAACCAGAGAAAAATAATGACGTCTTGAGTG
AACTGGCTCACAGAACGTGACGGATCAGAAAAGTGCTACAAAGTTTAGTG
TAAAGTCGACCAGCGTGCATGCATACTTGGCTGCTCGAAGCGTGATTCCT
AGGGAGAACAGTTGGTGTCACAGCTGACCTAGTCACAGGGCTGAAATCAG
TGTTCCAGGCGATGCTCACCGATTGCGTTACTCGAATGACCATGTCCTGA
GATATGCGAAAGGTCAGAAGGTGCTAGAATCAGATTTCTGTCGGGGACTC
GTGCTTGCAATGACACTCAAAGTCTGGATCAAACTTGAAGTATATCAATA
AAACCTGGTTTATTGACCACATGGCCAAGCAACCGTGTCTTACAGTGAAC
GCTCTCACATGAGATTTTTTTTTGCATTGATTCGCCGAGTAGACGGTCGC
AGTGAGAGTTCGTCTGCACAGCACCTTCAATCTGCCGCAAAAATAACAAA
TTTGTGTCAGGCGATGCGAGATGACACCATGTGGGGAGGAGGTGGCGAAG
TTGTGGGCCTGACGCATGTACTCAAGAGGCCAATACACGTGTACGACCTG
GTTTCAACAGGTCGAAGGTGAGCGAAATATCGCATCAATTGGACCAATCG
GTTGTTGCATTTTGTGTGTACTGCAAACACCATCTGGCTTCCAACATATC
GTACACTAATGTCATCAGGAGCGCAGGAACAACCATGGGCCACCCCATGA
AATCTGGTGATGGTTAATTTTTTTGTAGATACCCAACGCAAAGTGTCCCC
CATCCACACCTGTGGCAAATATTTGAATTTTGGTTGAAATCGCTGTAATT
GTGAAATACCCACGAGTTGACCTCTATTTTGACTAATGTCGCCTTGAAAA
CAAACCATTTAACCCAAACACAATCTCTGCTCGAAGTGCCATAACCGTTT
TGATATGTTTTGGTATATTGCTGGCGTGTCGGGGGTGTTGAGCGTCCGGG
TTCACAGAACAACCCCGCGGTTGTCATATTGTGTACCGCCGGACGAGTAA
AACGCCAAACGTTTCGCACGCACTCCGCCTATGGTGCCTTCGAGATGTTG
CATTTTGGAAATTACGACAGTGTTTTACTTCGAGCCTTCTCGGTTATTGG
CGAATTGTTGGATACGACGCCGTGTTTTAGTTCTCAACCCGTGTTTGTTC
ATCTCGGCCACTCTTGAAACAACGTTGCGCCGGTGCTCCTCCGCCCGACT
TTTGTTCGCAGGTTCGGGCTGAGGGTGATTGGAAGGTTTGGAGCCCCGCG
ATACTCTGCAGAGAAGCCAATCCACATTGTCAGCACATACGCAAGGTACA
GTTGGCTGCTCTTGAAGAGAACCTCTGCGGTGATCGCAAGTAATTTCAGG
AGTACGTACAGGGTATGGTGTTCGAATGTGTAGGGTTCGGCGCATGATTA
ATTCATACTTCTACGTCATATATAATGGAACCGCAAAACTCTGATCACGA
CTTGATTTTTTGCCGCACTCGTTTTCATTGTGTTTTCGCAGGTTCCCTGA
CTTAGATCCCGGAAGTCAATCTGCGGAGGGGAACCACTACGTAGCCTTGT
ATCATTACGAAGACGTTCCGGAGAAGAACAAAGAAAAACTCTGACCCCTC
AAGCAGTCTGGTTCGTTGCAACTTAGATGCAACAGTTTTGCATGGCCGTT
AAAGCCACATCCTGACGGAATGCGAGATAGGACGCTTGGCCGGAGGTAGG
TATCCTGTACGGAAGTTGGACGATGGCGCGCTAAGAGCAAGAAGGCTCGC
AGCTGACTTTGTACGTTTGGTAGCCGCATTTTCCTTTTGGGCACCGAGCT
GACTTTTGATCGGCGGGAAATCCTTCGGCGGTGAGTGGTGTCGGCCAAGG
TCTAGACGTAATATTTTGATTGGGAAAAGGGTCGACCCCTTTCTCCCTCC
CTGTCATACAAATACGACAGTTTATGTCGCTACAATAACCTGGGAGAGCA
CAAGTGGCACAAAAGATGAGGTTCAATGACAGCATACTAGGTACTTGGGG
GTAGATATGACTTGTTTACGAAGTAACACGAAGTACTGGTCAGCCTGTCG
TCGTCATCGGCTTACCCCACCTTGCGCTCCTTTTCCATAAAATTATGTCT
GTTCGTGCTCTTTTGCACTCGACATGTGCGAGGAATTCAGGACGTCACAA
TCGAATGGCAGACTCCTCTGACAAGTATAAATGACCTCATCTGGCAGCAT
CACGCACAATGCGCAGCAGCTGAGTCACGCCCCTTACTTGAGAGTGTGCG
TAGTCATCGCAATTCAAGATATTGCCG
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Coding sequence (CDS) from alignment at P-littoralis_Contig67:528599..536525+

>mRNA_P-littoralis_Contig67.104.1 ID=mRNA_P-littoralis_Contig67.104.1|Name=mRNA_P-littoralis_Contig67.104.1|organism=Pylaiella littoralis U1_48|type=CDS|length=1251bp|location=Sequence derived from alignment at P-littoralis_Contig67:528599..536525+ (Pylaiella littoralis U1_48)
ATGATGTGGTTAGCGGCTCATGTTGGCATTCTTATCCCAATTTCGGCGAC
AGCCTTCTCTTTGAGCAATAGCCGAGGCACTGCCTTCTCGGCAAGCTCTG
AGGTGATGTCACGTGTCAGTCAGGCCACATCGCGATATCGGAATGGGTGG
ACAAGTCGACCAGCAGGCACTTTGCAGGTGTTGTCGATGAGTTTTGGAGC
TGGTGCAACCAATCGGTATTCCTGGGACGAGACGGACAAGGAAGTGAATG
TCAAGGCGCGGTTACCAGCGTGGGCCAAGGGCAAGTCGGTTGTCCTCGAC
CTGACCCAAACCGGCATCAAACTCTCTCTTAAGGAAGAGGAGGGATCTCC
CATTATCGAGGGTAGCTTGCGAGGAGCCATCACCCTGGATGGCAGCTATT
GGACGATGGAGACCCTCGATGATAACGGTAAGATGCTTTACCTTACGCTG
GAGAAGGCACCGCAGCTTACCGGGCTGGGTCCGTGGATGGGTGTCGTCCA
GGGGGAGAAGCAGGTGGACTCCAACTACCCAGAGGAAGAAAAGGCGGCGG
AAATAGCTTCCATGGCCCGCGACGAGAAGGAATCACAAGGAGCTCAATCG
GGCGGACCGCGCTACACTGGAGTCGTGGACGAGGATGGATTTTGCAGAGA
TCTTCTGGCCGTGCAGGGAATGAGTGGAGCCATGGTTGCACGACAGGTAC
CGGTCAACGGGAACGCCTTGTTCTCCGCGGTGGCGATGTCTCGATGGTTC
ATTGAAAGTGGTGAACACTCAAAGGTCTCGTCGCCGGAGATCGAAGCAAT
AGCCAAGGATTTGCGGCAGAAAACGCTGGATTATCTCACGGGAGCATACA
AAGCGAACGATCAAATTTACCTGTCGGGTGAGCAAATGGCGGCCAGGCCG
TTCGTCGCGTCCCAGGCTAAAGCTAACGGCATGGCGGACGGAGACGAGTA
TTTAAAGGCGATGCGAGATGACACCATGTGGGGAGGAGGTGGCGAAGTTG
TGGGCCTGACGCATGTACTCAAGAGGCCAATACACGTGTACGACCTGGTT
TCAACAGGTCGAAGGTTCGGGCTGAGGGTGATTGGAAGGTTTGGAGCCCC
GCGATACTCTGCAGAGAAGCCAATCCACATTGTCAGCACATACGCAAGGT
TCCCTGACTTAGATCCCGGAAGTCAATCTGCGGAGGGGAACCACTACGTA
GCCTTGTATCATTACGAAGACGTTCCGGAGAAGAACAAAGAAAAACTCTG
A
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