mRNA_P-littoralis_Contig669.22.1 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig669.22.1
Unique NamemRNA_P-littoralis_Contig669.22.1
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
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BLAST of mRNA_P-littoralis_Contig669.22.1 vs. uniprot
Match: D7G468_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G468_ECTSI)

HSP 1 Score: 315 bits (806), Expect = 9.140e-103
Identity = 158/177 (89.27%), Postives = 168/177 (94.92%), Query Frame = 1 
Query:    1 RSMQPPAKAPKWYAGDDVKAKAAPQKHNPTKLRSSITPGTILILLSGRFRGKRVVFLKQLPSGTLLVTGPYSVNGVPLRRVNQAYVIATSMSVDVSKVTIPVEDDSYFTREETAKKTDEDQFFEQGAKASTVSDKRKGDQKTVDAGILDALTNPMLKAYLNAKFSLKKGDRPHEMVF 531
            +++ P AKAPKWY+GDDVK KAAPQKHNPTKLRS+ITPGTILILLSGRFRGKRVVFLKQLPSGTLLVTGPYSVNGVP+RRVNQAYVIATSMSVDVSKVTIP  DDSYFTREE A KTDEDQFFEQGAK+STVSDKRK DQKTVDAG+L A+TNPMLKAYLNAKFSLKKGDRPHEM+F
Sbjct:    3 KAVAPQAKAPKWYSGDDVKPKAAPQKHNPTKLRSTITPGTILILLSGRFRGKRVVFLKQLPSGTLLVTGPYSVNGVPMRRVNQAYVIATSMSVDVSKVTIPAADDSYFTREEVATKTDEDQFFEQGAKSSTVSDKRKADQKTVDAGVLAAMTNPMLKAYLNAKFSLKKGDRPHEMIF 179
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BLAST of mRNA_P-littoralis_Contig669.22.1 vs. uniprot
Match: A0A835YT51_9STRA (60S ribosomal protein L6 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YT51_9STRA)

HSP 1 Score: 219 bits (557), Expect = 2.350e-65
Identity = 118/172 (68.60%), Postives = 132/172 (76.74%), Query Frame = 1 
Query:   31 KWYAGDDVKA----KAAPQKHNPTKLRSSITPGTILILLSGRFRGKRVVFLKQLPSGTLLVTGPYSVNGVPLRRVNQAYVIATSMSVDVSKVTIPVEDDSYFTREETAKKTDEDQFFEQGAKASTVSDKRKGDQKTVDAGILDALT-NPMLKAYLNAKFSLKKGDRPHEMVF 531
            +WY  DD+KA    KA    H PTKLRSSITPGT+ +LLSGRFRGKRVVFLKQ+ SGTLLVTGPY VNGVPLRRVNQAYVIATS  +DVSKV +   DD+YF R   AKKT ED FF Q +K S VSD++K DQ  VDA IL  L+ + +LKAYLNAKFSL K DRPHEMVF
Sbjct:   14 RWYPADDIKAPRKSKAKRSVHKPTKLRSSITPGTVCVLLSGRFRGKRVVFLKQMASGTLLVTGPYKVNGVPLRRVNQAYVIATSTKLDVSKVDVSAIDDAYFARAPEAKKTAEDAFFAQASKESVVSDQKKKDQDVVDASILAGLSKDKLLKAYLNAKFSLTKKDRPHEMVF 185
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BLAST of mRNA_P-littoralis_Contig669.22.1 vs. uniprot
Match: A0A7S1U5W8_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1U5W8_9STRA)

HSP 1 Score: 199 bits (505), Expect = 6.760e-57
Identity = 108/170 (63.53%), Postives = 129/170 (75.88%), Query Frame = 1 
Query:   28 PKWYAGDDVKAKAAPQKHN-PTKLRSSITPGTILILLSGRFRGKRVVFLKQLPSGTLLVTGPYSVNGVPLRRVNQAYVIATSMSVDVSKVTIPVEDDSYFTREETAKKTDEDQFFEQGAKASTVSDKRKGDQKTVDAGILDALTN-PMLKAYLNAKFSLKKGDRPHEMVF 531
            P  Y  DDVK      + N PTKLR+SITPGT+LI+L+GRFRGKRVVFLKQL SGTLLVTGPY VNGVPLRRVNQAYVIATS+ VD++ V++P  DD +F RE+   KTDE+QFF     A+ VS  RK  QK VDAGIL A+   P+L+AYL A+FSL+ GD+PH+M F
Sbjct:   71 PAMYPADDVKKPLMRFRVNKPTKLRASITPGTVLIMLAGRFRGKRVVFLKQLSSGTLLVTGPYKVNGVPLRRVNQAYVIATSVVVDLAGVSLPDIDDEFFAREKKESKTDEEQFFSNEPTATVVSQARKDAQKAVDAGILAAVKKVPLLQAYLGARFSLRNGDKPHKMKF 240
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BLAST of mRNA_P-littoralis_Contig669.22.1 vs. uniprot
Match: K3WPZ3_GLOUD (60S ribosomal protein L6 n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WPZ3_GLOUD)

HSP 1 Score: 199 bits (505), Expect = 6.760e-57
Identity = 113/180 (62.78%), Postives = 132/180 (73.33%), Query Frame = 1 
Query:   19 AKAPKWYAGDDV-----KAKAAPQKHNPTKLRSSITPGTILILLSGRFRGKRVVFLKQLPSGTLLVTGPYSVNGVPLRRVNQAYVIATSMSVDVSKVTIPVEDDSYFTREETAKK-TDEDQFFEQGAKAST--VSDKRKGDQKTVDAGILDALTN-PMLKAYLNAKFSLKKGDRPHEMVF 531
            +KA KWY  D +      AK A       KLR SITPGT+LILLSGRFRGKRVVFLKQLPSGTLLVTGPY VNGVPLRRVNQAYVIATS  V++S VT+P  DDSYF +E+ +KK + E+QFF Q   AS   +SDKRK DQK +DA ++  L + P L+AYLNAKF+L K DR HE+ F
Sbjct:   61 SKAAKWYPADYIPKKLASAKTARNSKKTAKLRKSITPGTVLILLSGRFRGKRVVFLKQLPSGTLLVTGPYKVNGVPLRRVNQAYVIATSTKVELSDVTLPDIDDSYFVKEKPSKKDSKEEQFFAQSGAASAPAISDKRKQDQKAIDAILMKKLKDEPYLQAYLNAKFTLTKNDRVHELQF 240
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BLAST of mRNA_P-littoralis_Contig669.22.1 vs. uniprot
Match: A0A6G0WU17_9STRA (60S ribosomal protein L6 n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WU17_9STRA)

HSP 1 Score: 194 bits (493), Expect = 3.720e-55
Identity = 107/173 (61.85%), Postives = 126/173 (72.83%), Query Frame = 1 
Query:   31 KWYAGDDV-----KAKAAPQKHNPTKLRSSITPGTILILLSGRFRGKRVVFLKQLPSGTLLVTGPYSVNGVPLRRVNQAYVIATSMSVDVSKVTIPVEDDSYFTREETAKKTDEDQFFEQGAKASTVSDKRKGDQKTVDAGILDALT-NPMLKAYLNAKFSLKKGDRPHEMVF 531
            KWY  D V      AK A      TKLR+SITPGT+LILLSGRFRGKRVVFLKQL SGTLLVTGPY VNGVPLRRVNQA+VIATS  VD+S V +P  +D+YF +E+T  K DE+ FF Q + A+ VS++RK DQK VDA ++  +   P+LK YLNAKFSL K  R HE+ F
Sbjct:   66 KWYPTDYVPKPLPSAKTARNSVKTTKLRNSITPGTVLILLSGRFRGKRVVFLKQLASGTLLVTGPYKVNGVPLRRVNQAFVIATSTKVDISDVKLPEINDAYFAKEKTHAKKDEEAFFAQSSTAAIVSEQRKKDQKEVDAALIKKINATPLLKQYLNAKFSLSKTQRVHELKF 238
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BLAST of mRNA_P-littoralis_Contig669.22.1 vs. uniprot
Match: F0WZ30_9STRA (60S ribosomal protein L6 n=2 Tax=Albugo TaxID=65356 RepID=F0WZ30_9STRA)

HSP 1 Score: 190 bits (483), Expect = 7.820e-54
Identity = 108/174 (62.07%), Postives = 125/174 (71.84%), Query Frame = 1 
Query:   31 KWYAGDDVKAKAAPQK--HNPTK---LRSSITPGTILILLSGRFRGKRVVFLKQLPSGTLLVTGPYSVNGVPLRRVNQAYVIATSMSVDVSKVTIPVEDDSYFTREETAKKTD-EDQFFEQGAKASTVSDKRKGDQKTVDAGILDAL-TNPMLKAYLNAKFSLKKGDRPHEMVF 531
            KWY  D +  + A  K   N  K   LR SITPGT+LILLSGRFRGKRVVFLKQLPSGTLLVTGPY +NGVPLRRVNQAYVIATS  +D+S V     DDSYF +E+  KK+  EDQFFEQ   A  +SD+R+ DQK VD  +++ +   P+LKAYLNAKFSL K D  HEM F
Sbjct:   54 KWYPADYIPKRLASAKTVRNSKKTAVLRKSITPGTVLILLSGRFRGKRVVFLKQLPSGTLLVTGPYKINGVPLRRVNQAYVIATSTKIDISGVPSIDIDDSYFAKEKVKKKSSKEDQFFEQSTSAPVISDQRRKDQKAVDEVLINQIEAEPLLKAYLNAKFSLTKKDIVHEMKF 227
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BLAST of mRNA_P-littoralis_Contig669.22.1 vs. uniprot
Match: A0A485KCY7_9STRA (60S ribosomal protein L6 n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KCY7_9STRA)

HSP 1 Score: 190 bits (483), Expect = 1.060e-53
Identity = 104/173 (60.12%), Postives = 125/173 (72.25%), Query Frame = 1 
Query:   31 KWYAGDDV-----KAKAAPQKHNPTKLRSSITPGTILILLSGRFRGKRVVFLKQLPSGTLLVTGPYSVNGVPLRRVNQAYVIATSMSVDVSKVTIPVEDDSYFTREETAKKTDEDQFFEQGAKASTVSDKRKGDQKTVDAGILDALT-NPMLKAYLNAKFSLKKGDRPHEMVF 531
            KWY  D +      AK A       KLR+SITPGT+LILLSGRFRGKRVVFLKQL SGTLLVTGPY VNGVPLRRVNQA+VIATS  +D+S V +P  +D+YF +E+T  K DE+QFF Q + ++ VS++RK DQK VDA +L  +     LK YLNAKFSL K D+ HE+ F
Sbjct:   65 KWYPTDYIPRPLPSAKTARNSVKTAKLRASITPGTVLILLSGRFRGKRVVFLKQLASGTLLVTGPYKVNGVPLRRVNQAFVIATSTKIDISDVKLPELNDAYFAKEKTHAKKDEEQFFAQSSTSAIVSEQRKKDQKAVDAALLKKINATAHLKHYLNAKFSLTKNDKVHELKF 237
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BLAST of mRNA_P-littoralis_Contig669.22.1 vs. uniprot
Match: A0A1S2YFF1_CICAR (60S ribosomal protein L6-3-like n=1 Tax=Cicer arietinum TaxID=3827 RepID=A0A1S2YFF1_CICAR)

HSP 1 Score: 190 bits (482), Expect = 1.360e-53
Identity = 106/178 (59.55%), Postives = 131/178 (73.60%), Query Frame = 1 
Query:   13 PPAKAPKWYAGDDVKAKAAPQKHNP--TKLRSSITPGTILILLSGRFRGKRVVFLKQLPSGTLLVTGPYSVNGVPLRRVNQAYVIATSMSVDVSKVTIPVEDDSYFTREETAKKTD-EDQFFE-QGAKASTVSDKRKGDQKTVDAGILDALTN-PMLKAYLNAKFSLKKGDRPHEMVF 531
            P  K PK+Y  DDVK K    KH P  TKLR+SITPGT+LILL+GRF+GKRVVFLKQLPSG LLVTGP+ +NGVPLRRVNQ+YVI TS  VD+S V +   DD YF++E   KKT  E +FFE +  +  T+  ++K DQKTVD+ +L A+ + P LK YL A+FSLK G +PHE+VF
Sbjct:   58 PAEKPPKFYPADDVK-KPLRNKHKPKPTKLRASITPGTVLILLAGRFKGKRVVFLKQLPSGLLLVTGPFKINGVPLRRVNQSYVIGTSTKVDISAVNVDKFDDKYFSKEAPKKKTKGEGEFFEAENEEKKTLPQEKKDDQKTVDSALLKAIESVPDLKTYLGARFSLKSGVKPHELVF 234
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BLAST of mRNA_P-littoralis_Contig669.22.1 vs. uniprot
Match: A0A6A3T8I8_9STRA (Uncharacterized protein n=15 Tax=Phytophthora TaxID=4783 RepID=A0A6A3T8I8_9STRA)

HSP 1 Score: 189 bits (481), Expect = 1.690e-53
Identity = 108/181 (59.67%), Postives = 129/181 (71.27%), Query Frame = 1 
Query:   10 QPPAKAPKWYAGDDV-----KAKAAPQKHNPTKLRSSITPGTILILLSGRFRGKRVVFLKQLPSGTLLVTGPYSVNGVPLRRVNQAYVIATSMSVDVSKVTIPVEDDSYFTREETAKKTD-EDQFFEQGAKASTVSDKRKGDQKTVDAGILDALTN-PMLKAYLNAKFSLKKGDRPHEMVF 531
            QP     KWY  D +      AK         KLR SITPGT+LILLSGRFRGKRVVFLKQLPSGTLLVTGPY VNGVPLRRVNQA+VIATS  +D++ V +P  DD YFT+++ AKK+  ED+FFE  A A  ++++RK DQK VDA ++  L N P L+AYLNAKF+L K DR H+M F
Sbjct:   51 QPAHSTKKWYPADYIPKPLPSAKTKRNSIKTAKLRKSITPGTVLILLSGRFRGKRVVFLKQLPSGTLLVTGPYKVNGVPLRRVNQAFVIATSTRMDLTDVQLPEIDDEYFTKDKPAKKSSKEDRFFEM-ATAPVIAEQRKKDQKEVDALLMKKLANEPYLRAYLNAKFTLTKNDRVHDMRF 230
[Close]
BLAST of mRNA_P-littoralis_Contig669.22.1 vs. uniprot
Match: A0A6I9QRJ0_ELAGV (60S ribosomal protein L6 n=4 Tax=Arecaceae TaxID=4710 RepID=A0A6I9QRJ0_ELAGV)

HSP 1 Score: 189 bits (481), Expect = 1.740e-53
Identity = 103/177 (58.19%), Postives = 127/177 (71.75%), Query Frame = 1 
Query:   10 QPPAKAPKWYAGDDVKAKAAP-QKHNPTKLRSSITPGTILILLSGRFRGKRVVFLKQLPSGTLLVTGPYSVNGVPLRRVNQAYVIATSMSVDVSKVTIPVEDDSYFTREETAKKTD-EDQFFEQGAKASTVSDKRKGDQKTVDAGILDALTN-PMLKAYLNAKFSLKKGDRPHEMVF 531
            +P  K PK+Y  DDVK      +KH PTKLR+SITPGT+LILL+GRF GKRVVFLKQLPSG LLVTGP+ +NGVPLRRVNQAYVIATS  VD+S V+    DD YFT+E+  KK   E +FFE   +   +  ++K DQK VD  ++  +   P LKAYL A+FSL+ G +PHE+VF
Sbjct:   55 KPAEKPPKYYPADDVKHPIPNHRKHKPTKLRASITPGTVLILLAGRFMGKRVVFLKQLPSGLLLVTGPFKINGVPLRRVNQAYVIATSTKVDISAVSAEKFDDKYFTKEKKKKKNKGESEFFETEKETKALPQEKKDDQKAVDTSLIKVIEAVPDLKAYLGARFSLRAGMKPHELVF 231
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig669.22.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G468_ECTSI9.140e-10389.27Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835YT51_9STRA2.350e-6568.6060S ribosomal protein L6 n=1 Tax=Tribonema minus T... [more]
A0A7S1U5W8_9STRA6.760e-5763.53Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]
K3WPZ3_GLOUD6.760e-5762.7860S ribosomal protein L6 n=1 Tax=Globisporangium u... [more]
A0A6G0WU17_9STRA3.720e-5561.8560S ribosomal protein L6 n=1 Tax=Aphanomyces eutei... [more]
F0WZ30_9STRA7.820e-5462.0760S ribosomal protein L6 n=2 Tax=Albugo TaxID=6535... [more]
A0A485KCY7_9STRA1.060e-5360.1260S ribosomal protein L6 n=1 Tax=Aphanomyces stell... [more]
A0A1S2YFF1_CICAR1.360e-5359.5560S ribosomal protein L6-3-like n=1 Tax=Cicer arie... [more]
A0A6A3T8I8_9STRA1.690e-5359.67Uncharacterized protein n=15 Tax=Phytophthora TaxI... [more]
A0A6I9QRJ0_ELAGV1.740e-5358.1960S ribosomal protein L6 n=4 Tax=Arecaceae TaxID=4... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig669contigP-littoralis_Contig669:82486..86473 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D7G468
Preferred nameRPL6
PFAMsRibosomal_L6e,Ribosomal_L6e_N
Model size1546
Max annot lvl2759|Eukaryota
KEGG koko:K02934
KEGG Pathwayko03010,map03010
KEGG ModuleM00177
Hectar predicted targeting categoryother localisation
GOsGO:0000027,GO:0002181,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0016043,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0022625,GO:0022626,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042273,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904
Exons3
Evalue2.53e-108
EggNOG OGsCOG2163@1|root,KOG1694@2759|Eukaryota
Ec32 ortholog description60S ribosomal protein L6E
Ec32 orthologEc-02_001470.1
Descriptionribosomal large subunit assembly
Cds size528
COG categoryJ
BRITEbr01610,ko00000,ko00001,ko00002,ko03011
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791390.0455282-UTR-P-littoralis_Contig669:82485..824911680791390.0455282-UTR-P-littoralis_Contig669:82485..82491Pylaiella littoralis U1_48UTRP-littoralis_Contig669 82486..82491 +
1680791390.1638796-UTR-P-littoralis_Contig669:85461..864731680791390.1638796-UTR-P-littoralis_Contig669:85461..86473Pylaiella littoralis U1_48UTRP-littoralis_Contig669 85462..86473 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791390.068325-CDS-P-littoralis_Contig669:82491..826901680791390.068325-CDS-P-littoralis_Contig669:82491..82690Pylaiella littoralis U1_48CDSP-littoralis_Contig669 82492..82690 +
1680791390.137145-CDS-P-littoralis_Contig669:84355..845341680791390.137145-CDS-P-littoralis_Contig669:84355..84534Pylaiella littoralis U1_48CDSP-littoralis_Contig669 84356..84534 +
1680791390.1497881-CDS-P-littoralis_Contig669:85311..854611680791390.1497881-CDS-P-littoralis_Contig669:85311..85461Pylaiella littoralis U1_48CDSP-littoralis_Contig669 85312..85461 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig669.22.1prot_P-littoralis_Contig669.22.1Pylaiella littoralis U1_48polypeptideP-littoralis_Contig669 82492..85461 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig669.22.1

>prot_P-littoralis_Contig669.22.1 ID=prot_P-littoralis_Contig669.22.1|Name=mRNA_P-littoralis_Contig669.22.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=176bp
MQPPAKAPKWYAGDDVKAKAAPQKHNPTKLRSSITPGTILILLSGRFRGK
RVVFLKQLPSGTLLVTGPYSVNGVPLRRVNQAYVIATSMSVDVSKVTIPV
EDDSYFTREETAKKTDEDQFFEQGAKASTVSDKRKGDQKTVDAGILDALT
NPMLKAYLNAKFSLKKGDRPHEMVF*
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mRNA from alignment at P-littoralis_Contig669:82486..86473+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig669.22.1 ID=mRNA_P-littoralis_Contig669.22.1|Name=mRNA_P-littoralis_Contig669.22.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=3988bp|location=Sequence derived from alignment at P-littoralis_Contig669:82486..86473+ (Pylaiella littoralis U1_48)
CGATCCATGCAGCCCCCGGCGAAAGCCCCCAAGTGGTACGCTGGCGATGA
TGTGAAGGCCAAGGCCGCTCCTCAGAAGCACAACCCCACCAAGCTCCGGA
GCAGCATTACTCCCGGAACCATCCTGATCCTCCTTTCAGGACGCTTCCGC
GGCAAGCGTGTGGTGTTCCTCAAGCAGCTTCCTTCGGGAACTCTCTTGGT
GACTGGTGAGCATTCGTTCAGAGAGATGATTGATGCCAGTTGATGAGACG
GACAGAGATGTGTTCCCAGCAGGCCCAATGACGTAAATGAACCTTGCGCT
AGGCTTGGCCAGCATCGACGGTCGGCCGTGTTTCCCGCATGCCTCAATGT
GGGGGTGCCTGGAAGCGTCGGCTGACCCGAGACGAGCTTGGCAGTTGATA
AGCCGATGAGTGCAAAACTGCTTATGAGAACTGAGGGCTGAGCGTATTGT
TGCCATACCGTCGAGTATTCCGCACCTGTACATTGCACAACAGTTTTTAA
TGTTTCTTTTTGACGCATGACGCCTGAAAACGCTTTCCTCGCTCTCTCGC
GGAGTCTTGAACAGCGAGCACTTATTTACGACGTACTTCGTATCAACGTA
TGTACCATAACCGGTTTCCACAGTAGCCAAGTGGCTCCCCCGTCAACCTA
TGAGCAGAACATTCGCATGTTCGATTATCTCTTGGAGCGTTTTTTGACCT
GTAGTCGTAAGTGACAAAGGCAAGGGAATTTCGGTGGGACGGTAGAAACT
GTAACAATCAAGTTGTGACGGATAGGATAACGGAAAACTCCAGGGGCCAG
AACAGTACAGCCGATAGGGTAGTAGACTCAGACTTCCCATCAGATTGTTA
CTGCTGGGTCGTGACTGATGGAAAAGTAGCTGGTGATGGGACCAATGTCT
TGGTACCATCAACTACCGTCCCATCACATGTCATTGATGGTACTTCTACC
CTATCTAGACAGTAAAAGTAAAGCCCTGATCAAATCGGATTTGCGATCTT
GGATATCACGCTTTCAAAACGCCTCTGCTTCTGTGGCAATCCATTTCTCA
CGTTTCATGTGCCCCATCTAGACGCTAAAGAATGCCTCATCCGAAACAGA
TGAACAAGACGAACTGCGCCAAGAACGAAGAAGGACGTTCTGTCAACAAT
ACAAACCTACTCCTATTATACAAAGTTACAGCCTTCTCTTATTCTGATAT
TTATGTCGTTCTCGGTTGGTACGTTGAAGCGAGTACCGGTTCCACCGACT
GTTTATTTACAGGATATCCCTGCAGAGCCTCTTTCCTGTGACGGTAGGGG
TGTACAAGGTTTTATCGCGTGTCTATTGTGCGTGTGGTTCACAATTTCAA
TAAAAATGTGTTGATCATACGTGTGCACCGCCACGATGCAATACAAACAG
CATTAGCCCAGTTTACCGCGAGATATTGGCACTACCGCAAAACTGAAGCT
CACGAATCTCCCGAAAACAATCGCCCTTCGGCGCAACCTTACGCCCGGAG
TTGTGGTTCGGGACCGAGTGGTCGAACTGTACGGAGACACTTGGGTTTGC
CACACTAAAACGAAGATACTTGGGATTCATGCTCTAAAACCAAGACATCT
GGCGGAATCAAAATTCTTTATTTGGGCCAAAATGGGCATATTTTGACTTC
ATTTTAGTATAAACAACTGGCTTTTTTTTTTGCATCAGCTTCTTTGAGAC
TTCATCTTTCGAACGAACCTAACTATAGGATGATCGAAACAGTTTGGATG
CGCAAACAATTCGACGCACCTAACAGCCCAGACTTATGATACAAAGGAAG
TATTTGTCATTTTGAACGATGGAAATTTGTCTCTCAAGTGTTCTAACGAC
TGATGTCCTTGTCTTCGCAGGCCCGTACTCGGTTAACGGTGTTCCCTTGA
GGCGCGTCAACCAGGCGTACGTGATCGCGACGTCCATGTCGGTAGACGTG
TCGAAGGTCACCATCCCCGTCGAGGACGATTCGTACTTTACCCGCGAGGA
AACCGCGAAGAAGACTGACGAGGACCAGTTCTTTGAACAGGGAGCGAAGG
TACAAGAAGAAAAAAGATGGCTTGTTGTTTTACTGCAAATACGAGTCGAA
GGGACCTTGTCGTTGTTCCCCAACGTCGAAAATTGCCCACCCTTGCCACG
CACAAGGCGGAATGGCTTGGCCGGATGTAGTTTGCTGCCCAGCTTGCTGG
TTTCCAGGCACCGCAACCGCGCCTGCCGGTCTGTATATTTGCTCGTGTGC
TATGATTGTGGCCTAATACCGTATATGACACAAGATAACACACCCCGTGT
TAGGTTTTTTGCATTCCGTATTACTCCACAATCAGGAGGGTGCGAACATC
AAACAGCCCGTCATACGAAAGCTCTCGACGAGATCTTTCCAAAACCACCC
TTTTCGGCAGTGGCACCCTCCTGGTCGTGGAGCTATACGGAATGCAAAAA
GCTTAACACGGGGTGTGTTATCTTGTGTCATATGCTGTTAGTAAAATCAG
ATTCGGCTTCGCCGACGAGGGTAGGGACCGCGGACCCCTGCTCGCGAGAA
AAAATCTCACGCATGTACCGCAGAAGGAAGGTGGGGGTAACTCCTCCTGT
GTTGACCTTCCTCCTGTGTGACCCCGTCGATGGGCCTAGCCTGTAGTTTG
CAGACTAGTGTGCCAGAGAACATGGGATGACAACACATACGGTAATAATA
CGCCCCCTCTCCGGTACCACCGACGTGACGGTGCTCTGCGGAGAGAGGGC
GTTTTTTGCGAGGCTTTAACCTCGTCCCTTCGTTCGTGCTTTTATCCCAT
GTGCCCTTTTGCTTCCCTCTTGGTAGGCCTCCACTGTCTCCGACAAGCGC
AAGGGCGACCAAAAGACTGTCGACGCCGGAATCTTGGACGCTTTGACGAA
CCCCATGTTGAAGGCATACCTCAACGCAAAGTTCTCTCTTAAGAAGGGGG
ACCGCCCCCACGAAATGGTCTTCTAGGTTGCGACATGTTGCTGGACTCTT
GTCAATATGAAGGCTTGACTGACTTGATGGTTTCGTTTCTTTTGGCTCGA
AGGGTTCGCGCCCAACTGATGATTCTGTTGACTTTTATCGTTTGGTTGAC
ATTTGCCCTCCCCGAAGAATGCGACGTTCGCATGTACCGTGCGCACCGGC
GGGCCAACCCACATGTCACCGCACGTCTCGTTACACACTCCAAAATGTGT
GTCGCCCTTGGACCAGGTTCGCTTCGGCACCGACCCTGATCTTGTACGGG
TCGTTTTCGCAAGACATGATACTCACCAAGTGATTGCGTCCCCCCTTCCC
AACACTAGAACAGCCGGTGTCACAAAGCTTGTGACAAACATGCGAACTCT
CCCACTAATCCCTTGGGATTTGACATAGTAGTAGTCTCTCCGGTTTTTGG
GAAAGCTTGGGAAGTAAAGAACCCTCCAAAGCTCTTTGTCCCGATTCCCT
CTGGGCACCGCAGCAACGCGGCTGGCGTCGCTACCACAGAAGTTTGAGGA
AAAAGTGTTCTTCGCTGTAGCCGCTTTTGAATATCTGCGCCCGGCCATGT
CCGTTGCTGTCTTGTGGCGTAAACCGTTCCTGCAGAGCAACTAGTGTTCA
GCCATGACAACGAATCAGACACCTTTTTGTCATTTCACGCAAAAAACTTA
TGAATTCGCACCTCGCGACATTCTGTGCGTGAAGGACACGGGCTGCTGTG
AACTCAACAGGAACGGTTAAATGCTGTATGCCTTATCAGTTGAAGCCCTT
GGTTGTATCGGTCTGTGCTGAACTGTTGCAAATGTTGCCACTATCTTGGA
CTAGACGCCAAATACCTCATACTCCGGAGTATGAAGTATAACTTGTAGGA
AGGCAGCCTTATACGCCAGTCGCCCCGGTGAGTCACTTGATCATCCTCGA
AAACTGTCGACACTTCGGCTTGATTTCGAATCCCGGTGCAGTAACACGAT
CCGGAACTCTTCCCGTCGTGCGTGAGGGTGGAAAACGA
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Coding sequence (CDS) from alignment at P-littoralis_Contig669:82486..86473+

>mRNA_P-littoralis_Contig669.22.1 ID=mRNA_P-littoralis_Contig669.22.1|Name=mRNA_P-littoralis_Contig669.22.1|organism=Pylaiella littoralis U1_48|type=CDS|length=528bp|location=Sequence derived from alignment at P-littoralis_Contig669:82486..86473+ (Pylaiella littoralis U1_48)
ATGCAGCCCCCGGCGAAAGCCCCCAAGTGGTACGCTGGCGATGATGTGAA
GGCCAAGGCCGCTCCTCAGAAGCACAACCCCACCAAGCTCCGGAGCAGCA
TTACTCCCGGAACCATCCTGATCCTCCTTTCAGGACGCTTCCGCGGCAAG
CGTGTGGTGTTCCTCAAGCAGCTTCCTTCGGGAACTCTCTTGGTGACTGG
CCCGTACTCGGTTAACGGTGTTCCCTTGAGGCGCGTCAACCAGGCGTACG
TGATCGCGACGTCCATGTCGGTAGACGTGTCGAAGGTCACCATCCCCGTC
GAGGACGATTCGTACTTTACCCGCGAGGAAACCGCGAAGAAGACTGACGA
GGACCAGTTCTTTGAACAGGGAGCGAAGGCCTCCACTGTCTCCGACAAGC
GCAAGGGCGACCAAAAGACTGTCGACGCCGGAATCTTGGACGCTTTGACG
AACCCCATGTTGAAGGCATACCTCAACGCAAAGTTCTCTCTTAAGAAGGG
GGACCGCCCCCACGAAATGGTCTTCTAG
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