mRNA_P-littoralis_Contig668.24.1 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig668.24.1
Unique NamemRNA_P-littoralis_Contig668.24.1
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
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BLAST of mRNA_P-littoralis_Contig668.24.1 vs. uniprot
Match: D8LHC7_ECTSI (Asp_Arg_Hydrox domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LHC7_ECTSI)

HSP 1 Score: 422 bits (1085), Expect = 1.940e-147
Identity = 194/220 (88.18%), Postives = 204/220 (92.73%), Query Frame = 1 
Query:  241 MFFFPGLSPRPWHDPASFPWCGEMEKNVPAIRAEYEDLVHRKKAASDYDTGGDGGEHKLHSGRWDWHSYVLKGRRQEAFREHCPLTASLLDDVAGHMVGTPFFFSFFSTLHGGSSIAAHTAPCNLRLRCHLPLTVPSGNPSKCGMRVGGETRPWEKGKCLVFDDSYEHEVWNKTEGERVLLLFDLWHPDLVEEERLAVTDMFGYAARQGWLKG-DEEGAR 897
            MF+FPGLS  PWHDPASFPWC EMEKNVPAIRAEYE+LVH+KKAASDYDTGGDGGEHKLHSG+WDWHSYVLKGRRQE FR+HCPLTASLLD VA HMVGTPF FSFFSTLHGGSSIAAHTAPCNLRLRCHLPLTVPS +PS+CGMRVGGE RPWE+GKCLVFDD YEHEVWNKTE ERVLLLFDLWHPDL  EER AVTDMFGYAARQGWL+G D+EG R
Sbjct:    1 MFYFPGLSSWPWHDPASFPWCQEMEKNVPAIRAEYENLVHKKKAASDYDTGGDGGEHKLHSGQWDWHSYVLKGRRQEVFRQHCPLTASLLDSVADHMVGTPFSFSFFSTLHGGSSIAAHTAPCNLRLRCHLPLTVPSADPSQCGMRVGGEIRPWEEGKCLVFDDCYEHEVWNKTERERVLLLFDLWHPDLAGEERNAVTDMFGYAARQGWLRGGDKEGKR 220
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BLAST of mRNA_P-littoralis_Contig668.24.1 vs. uniprot
Match: A0A836CPE8_9STRA (Putative aspartyl/Asparaginyl beta-hydroxylase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CPE8_9STRA)

HSP 1 Score: 311 bits (798), Expect = 1.830e-103
Identity = 143/239 (59.83%), Postives = 177/239 (74.06%), Query Frame = 1 
Query:  172 MAATIVKSAMCRTRTSVHRPNPIMFFFPGLSPRPWHDP----ASFPWCGEMEKNVPAIRAEYEDLVHRKKAASDYDTGGDGGEHKLHSGRWDWHSYVLKGRRQEAFREHCPLTASLLDDVAGHMVGTPFFFSFFSTLHGGSSIAAHTAPCNLRLRCHLPLTVPSGNPSKCGMRVGGETRPWEKGKCLVFDDSYEHEVWNKTEGERVLLLFDLWHPDLVEEERLAVTDMFGYAARQGWLK 876
            + AT+VKSA+CRT T+  RP+P +FFFPGLS + WH+P        W   +E +  A++ EY DLV ++KAASDYD G    EHKLH G WDWHSYVLKG++Q +F E CP+TA LLD    HM GTP  +SFFSTLH  S+IA HTA CNLRLRCH PL VPS N  +CG+RVG E R WE+GK ++FDD+YEHEVWN T  +RV+LLFD+WHP+LV +ER A+ DMFGYA +QGW+K
Sbjct:    8 LTATLVKSAICRT-TAKCRPHPTLFFFPGLSSKTWHEPHKDTTHDTWVRRLESSYDAVKREYLDLVEKRKAASDYDVGT---EHKLHKGHWDWHSYVLKGQKQPSFAEACPITAQLLDATESHMTGTPMSYSFFSTLHPRSAIAPHTAACNLRLRCHFPLIVPSTNADECGIRVGDEVRAWEEGKAMLFDDAYEHEVWNHTGSQRVVLLFDIWHPELVPDERTAIMDMFGYARQQGWMK 242
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BLAST of mRNA_P-littoralis_Contig668.24.1 vs. uniprot
Match: A0A7S3MFY7_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3MFY7_9STRA)

HSP 1 Score: 261 bits (667), Expect = 1.110e-83
Identity = 131/235 (55.74%), Postives = 160/235 (68.09%), Query Frame = 1 
Query:  178 ATIVKSAMCRTRTSVHRPNPIMFFFPGLSPRPWHDPASFPWCGEMEKNVPAIRAEYEDLVHRKKAASDYDTGGDGGEHKLHSGRWDWHSYVLKGRRQEAFREHCPLTASLLD--DVAGHMVGTPFFFSFFSTLHGGSSIAAHTAPCNLRLRCHLPLTVPSGNPSKCGMRVGGETRPWEKGKCLVFDDSYEHEVWNKTEGERVLLLFDLWHPDLVEEERLAVTDMFGYAARQGWLK 876
            ATI++SA+CRTR   HRP P +FFFPGLS +P  DP+ F W  E+E     I  EY+ L   K   SDY   G   EHKLH G+WDW+SY+LKG+RQ  F  HCP T   L+  D    M GTPF F+FFSTLH  S+IA H  PCNLR+RCH PL VP     KCGM+VG +T  WE+GK ++FDD YEH+VWN+T+ ERVLLLFDLWHP+L  +E  A+ DMF  A ++GWLK
Sbjct:   10 ATILQSAVCRTRVK-HRPAPSLFFFPGLSTQPVFDPSLFSWTKELESKRDVILEEYKAL-RAKHPTSDY---GSKEEHKLHEGKWDWNSYILKGKRQTDFAIHCPKTVEFLESLDSPTLMRGTPFSFAFFSTLHPHSTIAPHYGPCNLRIRCHFPLIVPKSG--KCGMQVGDKTVTWEEGKPVLFDDCYEHKVWNETDEERVLLLFDLWHPELHPDEIFAIEDMFDEAKQKGWLK 237
[Close]
BLAST of mRNA_P-littoralis_Contig668.24.1 vs. uniprot
Match: W4FEV0_9STRA (Asp_Arg_Hydrox domain-containing protein n=3 Tax=Aphanomyces astaci TaxID=112090 RepID=W4FEV0_9STRA)

HSP 1 Score: 260 bits (665), Expect = 3.320e-83
Identity = 125/235 (53.19%), Postives = 163/235 (69.36%), Query Frame = 1 
Query:  178 ATIVKSAMCRTRTSVHRPNPIMFFFPGLSPRPWHDPASFPWCGEMEKNVPAIRAEYEDLVHRKKAASDYDTGGDGGEHKLHSGRWDWHSYVLKGRRQE--AFREHCPLTASLLDDVAGHMVGTPFFFSFFSTLHGGSSIAAHTAPCNLRLRCHLPLTVPSGNPSKCGMRVGGETRPWEKGKCLVFDDSYEHEVWNKTE-GERVLLLFDLWHPDLVEEERLAVTDMFGYAARQGWL 873
            A +++SA+C T T+  RP+P +F FPGL+  P+H+P  F W   +E NV  IR EY  L   +K  SDYD  G G EH LH G+WDW SYV KG++    +F EHCP TA+LL  + G M   PF ++FFS+L  GSSI AH+APCN+RLRCH PL VP G    CG+RV  +TR W++G+CL+ DDSY+HEVW+  + GERV+LLFD+WHPDL+ +ER A+ DMF  A  +GWL
Sbjct:   19 AALLRSALCLT-TAKPRPSPTLFMFPGLTSAPFHNPRDFDWTRALEANVDTIRTEYLALKAHQKT-SDYDVQG-GQEHSLHQGQWDWFSYVTKGKKPNGASFEEHCPTTAALLTSIPGFMTSVPFAYAFFSSLQPGSSIKAHSAPCNIRLRCHFPLFVPPG----CGIRVADQTRSWKEGECLILDDSYDHEVWHDGKNGERVVLLFDVWHPDLIVDERQALIDMFADATNKGWL 246
[Close]
BLAST of mRNA_P-littoralis_Contig668.24.1 vs. uniprot
Match: A0A024TW67_9STRA (Asp_Arg_Hydrox domain-containing protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024TW67_9STRA)

HSP 1 Score: 259 bits (663), Expect = 4.480e-83
Identity = 126/235 (53.62%), Postives = 163/235 (69.36%), Query Frame = 1 
Query:  178 ATIVKSAMCRTRTSVHRPNPIMFFFPGLSPRPWHDPASFPWCGEMEKNVPAIRAEYEDLVHRKKAASDYDTGGDGGEHKLHSGRWDWHSYVLKGRR--QEAFREHCPLTASLLDDVAGHMVGTPFFFSFFSTLHGGSSIAAHTAPCNLRLRCHLPLTVPSGNPSKCGMRVGGETRPWEKGKCLVFDDSYEHEVWNK-TEGERVLLLFDLWHPDLVEEERLAVTDMFGYAARQGWL 873
            A +++SA+C T T+  RP+P +F FPGL+  P+H+P  F W   +E NV  IR+EY  L   +K  SDYD    G EH LH+G+WDW SY+ KG +   +AF EHCP T SLL+ + G M   PF ++FFS+L  GSSI AH+APCN+RLRCH PL VP G    CG+RVG + R W++G+CL+ DDSY+HEVW+   +GERV+LLFD WHPDLV EER A+ DMF  A  +GWL
Sbjct:    7 AALLRSALCLT-TAKPRPSPTLFMFPGLTSAPFHNPRDFDWTRALEANVDVIRSEYLALKANQKT-SDYDVQS-GHEHALHNGQWDWFSYMTKGNKTGNDAFEEHCPTTTSLLNSIPGFMTSIPFAYTFFSSLQPGSSIKAHSAPCNIRLRCHFPLFVPPG----CGIRVGDQIRTWKEGECLILDDSYDHEVWHDGKKGERVVLLFDFWHPDLVPEERDALIDMFAEAKTKGWL 234
[Close]
BLAST of mRNA_P-littoralis_Contig668.24.1 vs. uniprot
Match: A0A6G0WYQ0_9STRA (Asp_Arg_Hydrox domain-containing protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WYQ0_9STRA)

HSP 1 Score: 259 bits (661), Expect = 8.150e-83
Identity = 126/233 (54.08%), Postives = 158/233 (67.81%), Query Frame = 1 
Query:  178 ATIVKSAMCRTRTSVHRPNPIMFFFPGLSPRPWHDPASFPWCGEMEKNVPAIRAEYEDLVHRKKAASDYDTGGDGGEHKLHSGRWDWHSYVLKGRRQEAFREHCPLTASLLDDVAGHMVGTPFFFSFFSTLHGGSSIAAHTAPCNLRLRCHLPLTVPSGNPSKCGMRVGGETRPWEKGKCLVFDDSYEHEVWNK-TEGERVLLLFDLWHPDLVEEERLAVTDMFGYAARQGWL 873
            A +++SA+C T T+  RP+P +F FPGL   P+H+P  F W   +E N+  IR EY  L  +KK  SDY   G   EH LH G+WDW SYV KG+R  +F E CP T +LL+ + G M   PF ++FFSTL   SSI AH+APCN+RLRCH PL VP G    CG+RV  ET  WE+GKCL+FDDSY+HEVW+   EGERV+LLFD+WHPDL+ EER A+  MF  A  +GWL
Sbjct:    7 AALLRSALCLT-TAKPRPSPTLFMFPGLKSAPFHNPRDFEWTAALEANLDTIREEYLRLKDQKKK-SDYVLTGQ--EHTLHQGQWDWFSYVSKGKRMPSFEEECPNTTALLNAIPGFMTSLPFAYAFFSTLQPQSSIKAHSAPCNIRLRCHFPLWVPKG----CGIRVADETTEWEEGKCLLFDDSYDHEVWHDGLEGERVVLLFDIWHPDLIPEEREALVQMFADAKEKGWL 231
[Close]
BLAST of mRNA_P-littoralis_Contig668.24.1 vs. uniprot
Match: A0A1W0A340_9STRA (Aspartyl/Asparaginyl beta-hydroxylase n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1W0A340_9STRA)

HSP 1 Score: 263 bits (671), Expect = 1.580e-82
Identity = 122/234 (52.14%), Postives = 163/234 (69.66%), Query Frame = 1 
Query:  178 ATIVKSAMCRTRTSVHRPNPIMFFFPGLSPRPWHDPASFPWCGEMEKNVPAIRAEYEDLVHRKKAASDYDTGGDGGEHKLHSGRWDWHSYVLKGRRQEAFREHCPLTASLLDDVAGHMVGTPFFFSFFSTLHGGSSIAAHTAPCNLRLRCHLPLTVPSGNPSKCGMRVGGETRPWEKGKCLVFDDSYEHEVWNK-TEGERVLLLFDLWHPDLVEEERLAVTDMFGYAARQGWLK 876
            A +++SA+C T T+  RP+P +F FPGL  +P+H    FPW   + +N+  IR EY  L H +K  SDY   G   EH LH G+WDW SYV+KG++   F +HCP T  LL+D+ G M G PF ++FFSTL   S+I AH+APCN+RLRCH PL VP G    CG+RV  +T+ W++G+C+VFDD+Y+HEVW+   +GERVLLLFD WHPDL+EEE+ A+ DMF  A  +GWL+
Sbjct:  138 AALLRSALCLT-TAKPRPSPTLFVFPGLKSQPFHANQDFPWTKLLSENLDIIREEYVALRHAQKE-SDYVVAGQ--EHTLHQGQWDWFSYVIKGKKTSLFEQHCPTTTKLLNDIPGFMTGLPFAYAFFSTLKPQSAIKAHSAPCNIRLRCHFPLFVPKG----CGIRVADQTKEWKEGECMVFDDAYDHEVWHDGAKGERVLLLFDFWHPDLIEEEKAALIDMFAQATDKGWLQ 363
[Close]
BLAST of mRNA_P-littoralis_Contig668.24.1 vs. uniprot
Match: A0A485KAE6_9STRA (Aste57867_1342 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KAE6_9STRA)

HSP 1 Score: 258 bits (658), Expect = 2.320e-82
Identity = 125/233 (53.65%), Postives = 160/233 (68.67%), Query Frame = 1 
Query:  178 ATIVKSAMCRTRTSVHRPNPIMFFFPGLSPRPWHDPASFPWCGEMEKNVPAIRAEYEDLVHRKKAASDYDTGGDGGEHKLHSGRWDWHSYVLKGRRQEAFREHCPLTASLLDDVAGHMVGTPFFFSFFSTLHGGSSIAAHTAPCNLRLRCHLPLTVPSGNPSKCGMRVGGETRPWEKGKCLVFDDSYEHEVWNK-TEGERVLLLFDLWHPDLVEEERLAVTDMFGYAARQGWL 873
            A +++SA+C T T+  RP+P +F FPGL  +P+HD   FPW    E+N+  IRAEY  L  R+K+ SDY   G   EH LH G+WDW SYV KG+R  AF   CP TA+LL+ V G M   PF ++FFS+L   S+I  H+APCN+RLRCH PL VP      CG+RV  ETR W++G+ ++FDDSY+HEVW+    GERV+LLFD+WHPDLV EER A+T MF  AA +GWL
Sbjct:    7 AALIRSALCLT-TAKPRPSPTLFVFPGLKSQPFHDAKDFPWTKAFEENLDTIRAEYLALKDRQKS-SDYVLTGQ--EHSLHQGQWDWFSYVTKGKRTSAFEAECPTTAALLNAVPGFMTSLPFAYAFFSSLQPKSAIKPHSAPCNIRLRCHFPLWVPKD----CGIRVADETREWKEGRAMIFDDSYDHEVWHDGATGERVVLLFDMWHPDLVPEEREALTQMFAEAAEKGWL 231
[Close]
BLAST of mRNA_P-littoralis_Contig668.24.1 vs. uniprot
Match: A0A8K1C3S3_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1C3S3_PYTOL)

HSP 1 Score: 253 bits (645), Expect = 2.800e-80
Identity = 125/240 (52.08%), Postives = 155/240 (64.58%), Query Frame = 1 
Query:  178 ATIVKSAMCRTRTSVHRPNPIMFFFPGLSPRPWHDPASFPWCGEMEKNVPAIRAEYEDLVHRKKAAS------DYDTGGDGGEHKLHSGRWDWHSYVLKGRRQEAFREHCPLTASLLDDVAGHMVGTPFFFSFFSTLHGGSSIAAHTAPCNLRLRCHLPLTVPSGNPSKCGMRVGGETRPWEKGKCLVFDDSYEHEVWNK-TEGERVLLLFDLWHPDLVEEERLAVTDMFGYAARQGWLK 876
            A +++SA+C T T+  RP+P +FFFPGL  + WHDP  F W   +E N   IR E+  L   +  AS      DY+      EH+LH G WDW SYV +GRRQ  F   CP T  +L+ + G M   PF +SFFS L   S+I AH+APCN+RLRCH PL VP G    CG+RVG ETR WE+GK LVFDD+Y+HEVW+    GERVLLLFD+WHPDL+ EER  + DMF  A  +GWLK
Sbjct:    7 AALLRSALCLT-TAKPRPSPTLFFFPGLKSQAWHDPKDFAWVQRLEANHAVIRDEFLALREARLKASAGTSVSDYNVNDK--EHQLHQGEWDWLSYVTQGRRQADFAVACPKTVEILESIPGFMTNLPFAYSFFSVLKPKSTIKAHSAPCNVRLRCHFPLFVPEG----CGIRVGDETRHWEEGKALVFDDAYDHEVWHDGASGERVLLLFDVWHPDLIREERECLVDMFDSAREKGWLK 239
[Close]
BLAST of mRNA_P-littoralis_Contig668.24.1 vs. uniprot
Match: A0A2D4CD74_PYTIN (Aspartyl/Asparaginyl beta-hydroxylase, putative n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4CD74_PYTIN)

HSP 1 Score: 251 bits (640), Expect = 8.240e-80
Identity = 115/218 (52.75%), Postives = 149/218 (68.35%), Query Frame = 1 
Query:  226 RPNPIMFFFPGLSPRPWHDPASFPWCGEMEKNVPAIRAEYEDLVHRKKAASDYDTGGDGGEHKLHSGRWDWHSYVLKGRRQEAFREHCPLTASLLDDVAGHMVGTPFFFSFFSTLHGGSSIAAHTAPCNLRLRCHLPLTVPSGNPSKCGMRVGGETRPWEKGKCLVFDDSYEHEVWNKTE-GERVLLLFDLWHPDLVEEERLAVTDMFGYAARQGWLK 876
            RP+P +FFFPGL+ R WH+P  F W   +E +   I+ E+  L   +  +SDY+      EH+LHSG WDW SYV +GRRQ  F  HCP T  LL+ + G M G PF +SFFS L   S+I AH+APCN+RLRCH PL VP G    CG+RVG E R WE+GK +VFDD+Y+HEVW++ + G+RVLLLFD+WHPDL++ ER  + DMF  A  +GWL+
Sbjct:    8 RPSPTLFFFPGLTSRAWHEPRQFDWVERLEAHRDVIQDEFLALQRARPQSSDYNVNDK--EHQLHSGGWDWLSYVTQGRRQADFAAHCPQTVELLESIPGFMTGLPFAYSFFSVLKPQSNIKAHSAPCNVRLRCHFPLVVPKG----CGIRVGDEEREWEEGKAIVFDDAYDHEVWHRGDSGDRVLLLFDIWHPDLIQAERECIVDMFQSARDKGWLQ 219
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig668.24.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LHC7_ECTSI1.940e-14788.18Asp_Arg_Hydrox domain-containing protein n=2 Tax=E... [more]
A0A836CPE8_9STRA1.830e-10359.83Putative aspartyl/Asparaginyl beta-hydroxylase n=1... [more]
A0A7S3MFY7_9STRA1.110e-8355.74Hypothetical protein n=1 Tax=Spumella elongata Tax... [more]
W4FEV0_9STRA3.320e-8353.19Asp_Arg_Hydrox domain-containing protein n=3 Tax=A... [more]
A0A024TW67_9STRA4.480e-8353.62Asp_Arg_Hydrox domain-containing protein n=1 Tax=A... [more]
A0A6G0WYQ0_9STRA8.150e-8354.08Asp_Arg_Hydrox domain-containing protein n=1 Tax=A... [more]
A0A1W0A340_9STRA1.580e-8252.14Aspartyl/Asparaginyl beta-hydroxylase n=1 Tax=Thra... [more]
A0A485KAE6_9STRA2.320e-8253.65Aste57867_1342 protein n=1 Tax=Aphanomyces stellat... [more]
A0A8K1C3S3_PYTOL2.800e-8052.08Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A2D4CD74_PYTIN8.240e-8052.75Aspartyl/Asparaginyl beta-hydroxylase, putative n=... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig668contigP-littoralis_Contig668:112780..120166 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D8LHC7
Preferred nameASPHD2
PFAMsAsp_Arg_Hydrox
Model size954
Max annot lvl2759|Eukaryota
KEGG koko:K00476
Hectar predicted targeting categoryother localisation
Exons7
Evalue1.67e-149
EggNOG OGsCOG3555@1|root,KOG3696@2759|Eukaryota
Ec32 ortholog descriptionIsopenicillin N synthase-like
Ec32 orthologEc-24_001390.1
EC1.14.11.16
Descriptionpeptide-aspartate beta-dioxygenase activity
Cds size729
COG categoryO
BRITEko00000,ko01000
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig668.24.1prot_P-littoralis_Contig668.24.1Pylaiella littoralis U1_48polypeptideP-littoralis_Contig668 112951..120112 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791389.0461824-UTR-P-littoralis_Contig668:112779..1129501680791389.0461824-UTR-P-littoralis_Contig668:112779..112950Pylaiella littoralis U1_48UTRP-littoralis_Contig668 112780..112950 +
1680791389.1459072-UTR-P-littoralis_Contig668:120112..1201661680791389.1459072-UTR-P-littoralis_Contig668:120112..120166Pylaiella littoralis U1_48UTRP-littoralis_Contig668 120113..120166 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791389.0583327-CDS-P-littoralis_Contig668:112950..1129961680791389.0583327-CDS-P-littoralis_Contig668:112950..112996Pylaiella littoralis U1_48CDSP-littoralis_Contig668 112951..112996 +
1680791389.0714097-CDS-P-littoralis_Contig668:116149..1162981680791389.0714097-CDS-P-littoralis_Contig668:116149..116298Pylaiella littoralis U1_48CDSP-littoralis_Contig668 116150..116298 +
1680791389.084433-CDS-P-littoralis_Contig668:116969..1171041680791389.084433-CDS-P-littoralis_Contig668:116969..117104Pylaiella littoralis U1_48CDSP-littoralis_Contig668 116970..117104 +
1680791389.0974162-CDS-P-littoralis_Contig668:118120..1181501680791389.0974162-CDS-P-littoralis_Contig668:118120..118150Pylaiella littoralis U1_48CDSP-littoralis_Contig668 118121..118150 +
1680791389.1104677-CDS-P-littoralis_Contig668:118636..1188141680791389.1104677-CDS-P-littoralis_Contig668:118636..118814Pylaiella littoralis U1_48CDSP-littoralis_Contig668 118637..118814 +
1680791389.125525-CDS-P-littoralis_Contig668:119134..1192441680791389.125525-CDS-P-littoralis_Contig668:119134..119244Pylaiella littoralis U1_48CDSP-littoralis_Contig668 119135..119244 +
1680791389.1359894-CDS-P-littoralis_Contig668:120031..1201121680791389.1359894-CDS-P-littoralis_Contig668:120031..120112Pylaiella littoralis U1_48CDSP-littoralis_Contig668 120032..120112 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig668.24.1

>prot_P-littoralis_Contig668.24.1 ID=prot_P-littoralis_Contig668.24.1|Name=mRNA_P-littoralis_Contig668.24.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=243bp
MAATIVKSAMCRTRTSVHRPNPIMFFFPGLSPRPWHDPASFPWCGEMEKN
VPAIRAEYEDLVHRKKAASDYDTGGDGGEHKLHSGRWDWHSYVLKGRRQE
AFREHCPLTASLLDDVAGHMVGTPFFFSFFSTLHGGSSIAAHTAPCNLRL
RCHLPLTVPSGNPSKCGMRVGGETRPWEKGKCLVFDDSYEHEVWNKTEGE
RVLLLFDLWHPDLVEEERLAVTDMFGYAARQGWLKGDEEGAR*
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mRNA from alignment at P-littoralis_Contig668:112780..120166+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig668.24.1 ID=mRNA_P-littoralis_Contig668.24.1|Name=mRNA_P-littoralis_Contig668.24.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=7387bp|location=Sequence derived from alignment at P-littoralis_Contig668:112780..120166+ (Pylaiella littoralis U1_48)
ACTGCTGTTGCTTACTGTGTGCTGTCCCTAAGGAGCTGCATACACCGGAG
ATAAACTGTACTCCGCTCTGGATCTCTCCGTTTCCTCTCTCTGCCTTTGT
GCCTGTGTTTTTGTCCTCTCCATCTAAGCCACCTCGAACATTCTTCATTT
ACTGCTTTGAGGATTGCGGTTATGGCGGCCACCATCGTCAAGAGCGCCAT
GTGCAGAACCAGAACATGTGAGACACGACATGGCCTGCTGTATGCTGTAT
TGTATAATAAGGAGCTGCGGAGGACAGCAGTAGTAGTATTGCAACGCAAA
ACGCTGTAAAACTTACTATGTATCTCTCTCTCTCTGTCTCCCTCGCTCCC
TCTACCTGACTGCGTGTCGTGCGTTCTGCTTCGAATTTACTTCGAAGTTT
GTACTTGTATGATACTCCGTATTTGGGTGAGTTTTTCAACGAAAAGGCTG
AGTTCGTAACTCGAAAGCCAGGAGGGCAAAGCAAAAGGGGCAGCCGTTGT
TGGTTTGCCGTGCTGCCCTGGACGCTACTGCAGCACGCAGCTGTCTTGAC
CGACAATCAACAAACTGAAAGCCAGAGGGGTTCCTTCTTACTTCGTACAT
ACTTCGGACGTTTATGACACCTCTGCCATGCGCATCGTACGATGAGCGAA
CATAAACATTTGTCAGAGACACCACCTAGACAGCGAGAGAGAGAGGAACA
CGGACAGGGCATGCATCCATACGCACCTGCTTGTGTCACGCAAGATACAC
CGCGAGTCTCTCACGCGTGCGCTGCCGTCCAAAACGTGAAGCAGGCCGAG
CTGCGCCAACCTCGTACACATCGAGCCTGGAGGGTCCTGCGTCGATCTTG
ATCGCAAACAAAGAAAAACGCGATGTGACGATTACGATTTCGGGGGGTGG
CGTGCAGACTGCGGGAAACCTTTCTATCAACACTCCTGTGGTAATGCTGT
TTGTATCTCATTGTAGGGGACCAAGGAATATGAGCATCTCGCTCTGCGGT
GTTTGCATATGCTATTCATGCACGCAGTGCTACTTGCCAGGGGAAACAGG
AGGAAGGGTAGGAACGCACACGCCAAGAGGGGATTTATCGTGAGCCTCAG
TCGAAGACAAAGACGAGGTTGATCGTGACGTACTGCTGGCCGCTATTGCT
TGTCTGATGTACGATGCAAGACGAGAAACAAGGACTCGCCGACTCTACCC
AGCTGCTGCCTGCGATCTGGGAAATACAGGCGCAGCATGCTCGCCACTAG
GTCAAGAGGGAACACCCATATACGGTCTGGTCTACGGGTGTTACCTCCTA
GCCAGGTGGCAAGCACACTGCGCGTGTGCGTCCCGCATCGCACGCCTCCG
AACAGATATTGGTGCTGCCGAACGACACCCACCCGTAAACGGTTGATAGG
CGTTTCCCTCCTTCCTGGTGGCGAGTACACCGCGCTTGCATGGTCGCACG
TCTCCGGACAGTACTAGGTGGTGTCGAATCGTTTTTTTCACAACCTATTC
GACGCCACCAACTGCCGTTCCGAGGCACGCGATCTGGTTTGTTCGGCGCG
AGCCTTTTCGACACCACCACCTGCTGTGCGGAGGCATGTGATCTGGGACA
GACAAGCGCAGCGTGCTCGCCACCACGAGGGGGGTCGCACTGATAACCTT
TTCGACGTTTCATGGGTGGTACCTCCTCCCTGGGGGAGACGGCGCTGCTT
CGCTTGTATGCCCCAGATCGCACGCCTCCTGATAGCGATCGGTGGAAGAG
GTTGTTGTTGTTGTTGATTCTCACATATTAGCTCACTACCGCCGCAGTCT
AGCCCGTGGTCACAAATCAGGCACATATCGTGCTAGGAGGAAAACAAATA
AAAAATAAAATAAATGGACTATGATCACCCACAGTCAAATCAGATATAGT
ACCGTTGATAGCGATCGGTGTGTTGAAGAGGTGTTATCTCTCGTCCAGCG
TCATGAGAGAATGGTTGCCACAGCAGCACGTTCCAACCCCGTCTTCGCCT
TCGACTGAGGCCGATAAATGTTTCCCCGCCATCTGATGCGGGGGCTTATG
TCCTTCGTCCTGTTCTCTTGCCAAGTCACACTGGGTGCAAGTAGTATCAT
ACTCCGTACATGGCATATAACGCCGCAGAGTCGATGTCCATTGTCCTTGG
TCCCACCGTTTGGTCGGCTTTGGGAGTTTGATCGCTTGGGTACAACGGTA
TTGTTGGTGAATCCCATGGTTAATTTCGCTGAAATAATGAAGCGCAGAAT
ATGCTGATGGAAAATAAGCAAACAAAAAATAGAAGTTCTTCAAAACGCAA
ATGAGGTCAAAGCATGCCGGTCGTGCGAATGTTTATGTTATGTTGATAAA
ACCATTTCCAGAATTCGTCTTAGAACGTCCCAAATTTAGCCCCGCACAAT
GCACAGAGACATCGTATCTACGATGGACTCGCCCCCAAGTACCCCCCCCA
CCACCTTGCCTACCGGGCAGCGAGTAATCATGTTGGCCGCCGCTATGCGA
AGGGCGACGAAGACAACTGCTCACGTATTTCCTAATTTTCCGATATGCTT
TTTTTTCCTGGAAAAGGATCCAAAAAAGCCCATGCTCGGGCGACTGTTTC
CCGTTTTTTTTTACCGCCATTCGCCCATGCAGGGCAATGCGCGAACGAAA
AGATGAAACAAATTTTTTCAGCTTAAAAAAACGAAGAATATTTCATAAAA
GACATTGCCTCAGGCATCGGACATGGGGCTCGTAGAAACATATCCGACCC
AGACTTAGGGAACAGAGAAGTTGTTGCTTAACGGTGGGACCAAACTTGTG
GGACACAAAAAGCATGACAGCAGTTCTAGCCGATAGATTACCGCATTTCA
CCCGCGCGATAAAACGCTGTGTCTAACCACCTGTGGATGCATCAATGACC
GGAGACCGTTCGCGATCCTGCGCCGTAGGGTTCATTCCTCCCCCCCCCGA
AAAGCTGTCCCCTATAGTTGGGCGTTCATCTAGCTCATACATCCCCAAAT
ATTTCCTTTGTGCCTCTGTACTTGGTACTAAGTACTTGGCGTGTTGCCGG
CACTGCTGCTTATTTTTTATTTTCGCTCTTTCTTCTCTTCGACGTCTGGA
TGTTTCGGGGTCATACGGTCCAACGACGACGACGGCGACAACAACAACAA
CAACAACAACAACAACAACGACAACAACAACAACAACAACAACAACAACA
ACAACAACAACAACAACAACAACAACAACAACAACAACAACAACAACAAC
AACAACAACAACAACAACAACAACAACAACAACAACAACAACAACAACAA
CAACAACAACAACAACAACAACAACAACAACAACAACAACAACAACATCG
ACACCGACAAAAATTGATAGCGGTGCACCGGCCGAACCCGATCATGTTCT
TCTTCCCCGGGCTGTCGCCCCGGCCTTGGCACGACCCAGCGAGCTTCCCG
TGGTGCGGAGAGATGGAGAAGAACGTCCCCGCCATTCGTGCGGAGTATGA
GGACCTTGTCCACAGAAAGGTGTGCGCAGGGTGGACGGACGGACGGACGG
ACGGGAACGCGGTAGACACACCGCATATATAGACAGGCACACGTGCATCC
CGCAACACTCTGCCGTTTGTCACTGTTCTGAGGCACACCGGCAGTACTGT
AGCAGGGATTTGCCATAATTGTGTGGTCCTTGTCGGGGCATGATTGTACG
ATGTAGTTGGAGCATGCCTTTCTGCCTGTCACAGCAGTACATCGCACGGG
AAACGTGGCTTATTCTTGAAGCATTCGCGTGAGAAGAAGGCGCCAATGTG
CACTCAAGGATATGTCTTCGGCGTTTTTGGGATGTGTCCTTCATCTTGGT
CACCTCCTCATTAGAGGGAAAATAATGAGAACAAATACGATATTGAGCCC
CGGGGGGGACCGATTTGTATCGATCGAAAAAGCAGGCAAATCAGGCAGCG
ACTCGGTAGCAAAGTAATCCGAGAGTTGGGGGGGATGGTATATTTAGGGA
GGTGGTCGGCCACAAGAAAATACTCACACCAGTAGTCACACCAGTCAGGG
TCTAGATACAAAGGGCGCAGGATCTCTAGGTGCGCGCGAAGCACCACCCC
CACCGCACAGCACCGCGCCATGCCTGCCGCCCCACACACGGCCCTGTTTC
TCTCCTCGTCGGTCTCCGGTACGATTTGATCCTCAATCAGAAAGCAGCCT
CGGATTACGACACGGGCGGCGATGGGGGGGAGCACAAGCTGCACTCCGGA
AGGTGGGACTGGCACAGCTATGTGCTCAAAGGTCGGAGGCAGGAGGCGTT
TCGGGAACACTGTCCGCTTACCGCGGTAAGATGGGAAAATAGAAACGTAT
CGTGATGTGATGATGTAGTAGGACTCTAACGTATGCGCACGTACGTTTTT
TTTGTTGTGGCACTGAAATTCATTATGGGGGCCGACATGGCACTCGTAGC
TATGGCGAGAACAAGATGTATACATGAAGTAGCAAAAGGGAGAATGGGCT
GGTTACCATTTTCAGTTGCTCGTAGAGAGGGCAGTTGTGGTCCCTCTGCA
GTGTGGTGTTGACCGTGCGTGTAACCGCTTGACTCGGCTCGCCATGCCTA
CTGTGTAGCTTGTATGGTGTACGTCTTTCACGCCTATCGTCAAGCCCATC
CGTACATACTCCCAATCCCGCGGTAGAGCGCAGCCGCACTCTATGGCAAG
GTTACTCTCGTTGGCCACTAATTCCGCGTGGTGAAGAGATCGCGGCTGAA
GTACGGTTCCAGAGAGGGGCACCAATACTCTCGGGTTGCCCTCACTCCGC
CGCGCATTGCTTGTGCGATACTCAACCGAGCAACCTCGTCATCGTGCATG
ACGTATGTGGGTAAACTGTGTTGGGCATCGCACCCCGCGCGCCAGACATG
TGTACACAGAGATTTCCGGCCTTGCTTGGAAGGACGTGGCCATCGCCGCT
GCTATCAGAATGTCGTCAGGAAGATGTTCTCCGGGTCGGCGCCCGCTAGC
AAGTAAAAGGGGTTCAAACCTGAGCCCCAGATTAAAAAAATATGTGAAAT
TCGGCGTGAGAGATTGGACGTAGCGGCCCGCGCCACACTGAATCCTTATT
CTCGGCTGTGCGTACTCGTTGGGACAAGATGAGGTTTCGAGCCATGGCCC
AAATTTTACCTTTGCAGTTCCGCCCCATCCTTAtcTCTCTCTCTCTCTTT
CTCTCTCTGTTCCTCTCTGTTCCTCTCTGTTCCTCTCTGGCTCTCTCCCT
CTCTCCCTCCCTCGCTCTTGCTCCCTCTCCGTTCCCATCGCTCTCAACTG
CTGGTGTCGCCGTTGCACATGTTGTTCGTGTGGTCGTCTAGTCTCTTCTG
GACGACGTGGCGGGTCACATGGTGAGCGGTTGTACATACGTGCTTAGTAT
TTTAGTCGCCCGCCCCCCTTTTCAGCACGTGATCCAGAAGGGTTTAATAA
AGTATGTCACCTCGACCCGGCTCATGCTTACACCGACGAAATTCAGAGTG
TTTCGGATGGACATTCGAAAAGGAGACAACTCAGTGGACAACTTCTCCCT
ACCGCGAATTGTCGTGCTTCGAGCGTGGTCTCTCCTCTTCATGGGCGTTT
TTTTTTTGTCGAGTTCATTATGCTTCAACTCTGTCCGTCTTTGTTTCTTC
ACTGCGAACGCTTCCCCTCCCACTACTACTGCTTCTGCTGCTGCTGCTGC
TCCGGTCGCACGCTTTGTATTTCACGCGCACACACAGACGTGCTAGCGCG
CGCCTACCAAGATCTTGTCCGTTCCCCTCGTATTTTTTTTCAAAACGACG
CTGCATCTGCTGCTGCTGCTGCTGCTGCTGCTCCCGCGCCCACGTAATAT
TTCGCAGGTCGGCACCCCTTTCTTTTTCTCTTTCTTTTCCACCCTGCACG
GGGGGAGCTCGATAGCGGCGCACACGGCCCCCTGCAACCTGCGCCTGCGG
TGTCACCTCCCCCTCACCGTGCCGTCGGGGAACCCTTCCAAGTGCGGGAT
GCGTGTGGGTGGAGAAACTCGGCCGTGGGAGAAAGGTAAGACGCATGTAC
AGTAGACTTCAAGACATGATATATATTTTAGTGTGGACTGATGCGCGCGC
TCTCTCGCTATCCGTGGCGTTTTAACTCGGCTCATGCTTTGGTTTGGCTG
GGCGGGGGGCACTCTATGTACCCAGAACCTGAAGAACCTTTATGGTGGCT
GATAAGACGGCAGTGGAATGATTTGGTATATGGTGGCTGATAAAACAGCA
GCAGTGGAATGATTTTGTGTGTGAAAAATTGTGAAAACATGCTCGGGGCG
CAAATTCGCCACAATGTGCTCACATGTGTGCCGTTTATGACGAAACCAAT
GCCAGGCAAGTGTTTGGTCTTCGATGACAGCTACGAGCACGAGGTGTGGA
ACAAGACCGAAGGGGAGCGCGTATTGCTGCTATTTGATCTGTGGCACCCT
GACCTAGTGGAGGAGGTAAGACCCGTATGCTATTCGTTTGAATGCCTCAT
TTTCATGTGTCAAGCTGGGGGTTGTGTAAACGTCATTCATCAAGTCGTGC
GGGCAGCAGCGAAGAACGCCAAGCAAGACAAGACGTGACTTCGGTTGCCC
CAGGTTGCTTTTCGTATCTCGGAAACTGGCTCACACACATCAACTACACA
CAGCAGTGTAACCTTCCACTTTTTGACGTCACCTGTTTGCTCCCTTTTTT
GTCCATTTCTGAGAGCGGAATCCGTAGACTCGGGGGTCAAGGGTGTTGCA
TCCTCGTAGAAGAGAAAAAAAGAAAAAACGCGCAACACATGTACAACCGG
TAGATCTGCTGTCTGCTGTCTGGAGGACGTGGTAGAATACCGAGGGTCCA
GAAACCCCTATCTATCGATGGTCTCCTCTCCTACGAGCAGATTGTGATCT
CCTCTGCCACGAGCAGATGGTGCTCTCCTCTGCTACGAGCAGATGGAGAT
TCTGGGCCCTCGAAAACGGGTCCACATTGGCTCGCTCGGACCACTCGACT
CTTCCTTACTAAGCCTGATAACAATAGAGGAAATAATTTACGTCTGCGTG
GCATGTCATACTTATGACGTCCAAAGACATAAGCTTTAATTTCGAGTTTG
AGTTTGAGGGTGCCAGCGCAGTAGCTTGATTATCTTCCTGCAGTAGCGTG
TTCCACTGCCTTGTCACTGTTTTTTTCTTGTACGTGCTGGTACATCGACA
TGTGATCGGCCTGCCAATGTCATACGCAACCCTTTCGCCTACCTTTACGC
AGGAGAGGCTTGCCGTGACCGACATGTTCGGATACGCCGCTAGGCAAGGC
TGGCTGAAGGGTGACGAAGAAGGGGCAAGATAGCATTGTGTGTGGTGAAA
AATAGGGGACCACCAAAACGAGCGTCGCGCGGGGGGC
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Coding sequence (CDS) from alignment at P-littoralis_Contig668:112780..120166+

>mRNA_P-littoralis_Contig668.24.1 ID=mRNA_P-littoralis_Contig668.24.1|Name=mRNA_P-littoralis_Contig668.24.1|organism=Pylaiella littoralis U1_48|type=CDS|length=729bp|location=Sequence derived from alignment at P-littoralis_Contig668:112780..120166+ (Pylaiella littoralis U1_48)
ATGGCGGCCACCATCGTCAAGAGCGCCATGTGCAGAACCAGAACATCGGT
GCACCGGCCGAACCCGATCATGTTCTTCTTCCCCGGGCTGTCGCCCCGGC
CTTGGCACGACCCAGCGAGCTTCCCGTGGTGCGGAGAGATGGAGAAGAAC
GTCCCCGCCATTCGTGCGGAGTATGAGGACCTTGTCCACAGAAAGAAAGC
AGCCTCGGATTACGACACGGGCGGCGATGGGGGGGAGCACAAGCTGCACT
CCGGAAGGTGGGACTGGCACAGCTATGTGCTCAAAGGTCGGAGGCAGGAG
GCGTTTCGGGAACACTGTCCGCTTACCGCGTCTCTTCTGGACGACGTGGC
GGGTCACATGGTCGGCACCCCTTTCTTTTTCTCTTTCTTTTCCACCCTGC
ACGGGGGGAGCTCGATAGCGGCGCACACGGCCCCCTGCAACCTGCGCCTG
CGGTGTCACCTCCCCCTCACCGTGCCGTCGGGGAACCCTTCCAAGTGCGG
GATGCGTGTGGGTGGAGAAACTCGGCCGTGGGAGAAAGGCAAGTGTTTGG
TCTTCGATGACAGCTACGAGCACGAGGTGTGGAACAAGACCGAAGGGGAG
CGCGTATTGCTGCTATTTGATCTGTGGCACCCTGACCTAGTGGAGGAGGA
GAGGCTTGCCGTGACCGACATGTTCGGATACGCCGCTAGGCAAGGCTGGC
TGAAGGGTGACGAAGAAGGGGCAAGATAG
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