mRNA_P-littoralis_Contig666.58.1 (mRNA) Pylaiella littoralis U1_48
|
Overview
Homology
BLAST of mRNA_P-littoralis_Contig666.58.1 vs. uniprot
Match: A0A6H5JUY9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUY9_9PHAE) HSP 1 Score: 186 bits (472), Expect = 7.190e-57 Identity = 84/140 (60.00%), Postives = 107/140 (76.43%), Query Frame = 1
Query: 130 MNLEKVMPLPLNYSAYTQTSVELVLKGYGKNKKQLLTHMQNICTVYACLAVKRNAGIVGTTVRHAAAAKGYKEIAVPGFFRWAKDEGIVLP-GWLTMDFMGRTTLEGDPVLFQDGKKLWSRFDEAFRIMKRDYNPIWDRC 546
M L+ V PLPL ++ Y + ++EL+L G G ++ +LL H+QN+C VYACLAVKRNAGIV T ++ AAAKGYK+IAVPGFF+W K+ GIV+ WLT + MGRT+L G PVLF DGKKLW RFD+ R MK+ YN +WDRC
Sbjct: 4 MKLDNVQPLPLEFNGYVEGTLELLLGGKGLSQIKLLKHLQNVCIVYACLAVKRNAGIVSTEAKYKAAAKGYKDIAVPGFFKWLKENGIVIKQAWLTFEVMGRTSLNGAPVLFTDGKKLWKRFDKVMREMKKTYNKVWDRC 143
BLAST of mRNA_P-littoralis_Contig666.58.1 vs. uniprot
Match: A0A6H5L481_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L481_9PHAE) HSP 1 Score: 161 bits (408), Expect = 4.230e-44 Identity = 76/139 (54.68%), Postives = 102/139 (73.38%), Query Frame = 1
Query: 130 MNLEKVMPLPLNYSAYTQTSVELVLKGYGK-NKKQLLTHMQNICTVYACLAVKRNAGIVGTTVRHAAAAKGYKEIAVPGFFRWAKDEGIVLPGWLTMDFMGRTTLEGDPVLFQDGKKLWSRFDEAFRIMKRDYNPIWDR 543
+N+++V+PLPL Y+ Y +TS+ L L+ KQ + +QN+C VY+CLAVKRNAG+VGT + AAAA+GY+EIAVPGFFRWA+D I P LTM +G T+ +G PVL+ +GKKLW++FD A MK+ NPIWDR
Sbjct: 3 INVDEVLPLPLVYNDYVKTSINLALENKKLFTLKQQMLFIQNVCIVYSCLAVKRNAGVVGTEAKRAAAAQGYREIAVPGFFRWARDNDITFPSELTMKRIGATSTDGAPVLYTNGKKLWTKFDAAMLKMKKFCNPIWDR 141
BLAST of mRNA_P-littoralis_Contig666.58.1 vs. uniprot
Match: D7FPI6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FPI6_ECTSI) HSP 1 Score: 152 bits (384), Expect = 4.890e-43 Identity = 76/147 (51.70%), Postives = 98/147 (66.67%), Query Frame = 1
Query: 130 MNLEK---VMPLPLNYSAYTQTSVELVL--KGYGKNKKQLLTHMQNICTVYACLAVKRNAGIVGTTVRHAAAAKGYKEIAVPGFFRWAK-----DEGIVLPGWLTMDFMGRTTLEGDPVLFQDGKKLWSRFDEAFRIMKRDYNPIWD 540
MN +K V LPL +++Y +T + ++ + G +LL H+QN+C VYACL VKRNAGIV T +HAAAAKGYK+IAV GFF+W K D+ P WLT + MGRT++ GD VLF GKKLW RFD R +K+ YNP+WD
Sbjct: 1 MNAKKRDGVQSLPLEFNSYAETVISMLRDRRSSGLTDAKLLKHLQNVCIVYACLTVKRNAGIVSTQAKHAAAAKGYKDIAVLGFFKWLKENLEADQYFSQP-WLTFEVMGRTSMSGDAVLFTHGKKLWKRFDNIMRALKKFYNPVWD 146
BLAST of mRNA_P-littoralis_Contig666.58.1 vs. uniprot
Match: A0A6H5KDP2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KDP2_9PHAE) HSP 1 Score: 133 bits (334), Expect = 7.360e-37 Identity = 62/107 (57.94%), Postives = 82/107 (76.64%), Query Frame = 1
Query: 130 MNLEKVMPLPLNYSAYTQTSVELVLKGYGKNKKQLLTHMQNICTVYACLAVKRNAGIVGTTVRHAAAAKGYKEIAVPGFFRWAKDEGIVLP-GWLTMDFMGRTTLEG 447
M L+ V PLPL ++ Y + ++EL+L G G ++ +LL H+QN+C VYACLAVKRNAGIV T ++ AAAKGYK+IAVPGFF+W K+ GIV+ WLT + MGRT+L G
Sbjct: 4 MKLDNVQPLPLEFNGYVEGTLELLLGGKGLSQIKLLKHLQNVCIVYACLAVKRNAGIVSTEAKYKAAAKGYKDIAVPGFFKWLKENGIVIKQAWLTFEVMGRTSLNG 110
BLAST of mRNA_P-littoralis_Contig666.58.1 vs. uniprot
Match: A0A6H5JZP4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZP4_9PHAE) HSP 1 Score: 133 bits (334), Expect = 6.140e-36 Identity = 62/107 (57.94%), Postives = 82/107 (76.64%), Query Frame = 1
Query: 130 MNLEKVMPLPLNYSAYTQTSVELVLKGYGKNKKQLLTHMQNICTVYACLAVKRNAGIVGTTVRHAAAAKGYKEIAVPGFFRWAKDEGIVLP-GWLTMDFMGRTTLEG 447
M L+ V PLPL ++ Y + ++EL+L G G ++ +LL H+QN+C VYACLAVKRNAGIV T ++ AAAKGYK+IAVPGFF+W K+ GIV+ WLT + MGRT+L G
Sbjct: 4 MKLDNVQPLPLEFNGYVEGTLELLLGGKGLSQIKLLKHLQNVCIVYACLAVKRNAGIVSTEAKYKAAAKGYKDIAVPGFFKWLKENGIVIKQAWLTFEVMGRTSLNG 110
BLAST of mRNA_P-littoralis_Contig666.58.1 vs. uniprot
Match: A0A6H5K5X3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K5X3_9PHAE) HSP 1 Score: 128 bits (322), Expect = 9.990e-32 Identity = 64/131 (48.85%), Postives = 88/131 (67.18%), Query Frame = 1
Query: 130 MNLEKVMPLPLNYSAYTQTSVELVL-KGYGKNKKQLLTHMQNICTVYACLAVKRNAGIVGTTVRHAAAAKGYKEIAVPGFFRWAKD----EGIVLPGWLTMDFMGRTTLEGDPVLFQDGKKLWSRFDEAFR 507
M L+ V LPL +++Y + + ++ + G +LL H+QN C VYACLAVKRNAGIV T RHAAAA+GYK+IAVPGF + ++ E L WLT + MG+++++G VLF DG+KLW RFD+ R
Sbjct: 228 MKLDGVQSLPLKFNSYAEAVISMLRDRSSGLTDAKLLKHLQNGCIVYACLAVKRNAGIVSTQARHAAAAQGYKDIAVPGFIKRLQENLDKEDFFLQPWLTCEVMGKSSMKGGAVLFTDGEKLWKRFDKILR 358
BLAST of mRNA_P-littoralis_Contig666.58.1 vs. uniprot
Match: A0A6H5JPS0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPS0_9PHAE) HSP 1 Score: 129 bits (323), Expect = 1.390e-31 Identity = 64/131 (48.85%), Postives = 89/131 (67.94%), Query Frame = 1
Query: 130 MNLEKVMPLPLNYSAYTQTSVELVL-KGYGKNKKQLLTHMQNICTVYACLAVKRNAGIVGTTVRHAAAAKGYKEIAVPGFFRWAKD----EGIVLPGWLTMDFMGRTTLEGDPVLFQDGKKLWSRFDEAFR 507
M L+ V LPL +++Y +T V ++ + G +LL H+QN VYACLAVKRNAGIV T +HAAAA+GYK+IAVP FF+W ++ E L WLT + MG+T+++G VLF +G+K+W RFD+ R
Sbjct: 400 MKLDGVQSLPLEFNSYAETVVSMLRDRSSGLTDAKLLKHLQNGRIVYACLAVKRNAGIVSTQAKHAAAAQGYKDIAVPSFFKWLQENLDKEDSFLQPWLTFEVMGKTSMKGGAVLFTNGEKMWKRFDKILR 530
BLAST of mRNA_P-littoralis_Contig666.58.1 vs. uniprot
Match: A0A6H5JXZ8_9PHAE (Uncharacterized protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JXZ8_9PHAE) HSP 1 Score: 112 bits (281), Expect = 1.090e-28 Identity = 54/111 (48.65%), Postives = 77/111 (69.37%), Query Frame = 1
Query: 130 MNLEKVMPLPLNYSAYTQTSVELVL-KGYGKNKKQLLTHMQNICTVYACLAVKRNAGIVGTTVRHAAAAKGYKEIAVPGFFRWAKD----EGIVLPGWLTMDFMGRTTLEG 447
M L+ V LPL +++Y +T + ++ + G +LL H+QN+C VYACLAVKRNAGIV T +HAAA +GYK+IAVPGFF+W ++ E L WLT + MG+T+++G
Sbjct: 4 MKLDGVQSLPLEFNSYAETVISMLRDRSSGLTDAKLLKHLQNVCIVYACLAVKRNAGIVSTQAKHAAAPQGYKDIAVPGFFKWLQENLDKEDFFLQLWLTFEVMGKTSMKG 114
BLAST of mRNA_P-littoralis_Contig666.58.1 vs. uniprot
Match: A0A6H5JJR6_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJR6_9PHAE) HSP 1 Score: 113 bits (282), Expect = 1.210e-28 Identity = 57/113 (50.44%), Postives = 76/113 (67.26%), Query Frame = 1
Query: 130 MNLEKVMPLPLNYSAYTQTSVELVL--KGYGKNKKQLLTHMQNICTVYACLAVKRNAGIVGTTVRHAAAAKGYKEIAVPGFFRWAK-----DEGIVLPGWLTMDFMGRTTLEG 447
M L+ V LPL +++Y +T + ++ + G +LL H+QN+C VYACLAVKRNAGIV T +HAA AKGYK+IAVPGFF+W K D+ P WLT + MGRT++ G
Sbjct: 4 MKLDGVQSLPLEFNSYAETVISMLRDKRSSGLTDTKLLKHLQNVCIVYACLAVKRNAGIVSTQAKHAAVAKGYKDIAVPGFFKWLKENLEADQYFSQP-WLTFEVMGRTSMSG 115
BLAST of mRNA_P-littoralis_Contig666.58.1 vs. uniprot
Match: A0A6H5JF32_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JF32_9PHAE) HSP 1 Score: 107 bits (268), Expect = 9.290e-27 Identity = 52/111 (46.85%), Postives = 76/111 (68.47%), Query Frame = 1
Query: 130 MNLEKVMPLPLNYSAYTQTSVELVL-KGYGKNKKQLLTHMQNICTVYACLAVKRNAGIVGTTVRHAAAAKGYKEIAVPGFFRWAKD----EGIVLPGWLTMDFMGRTTLEG 447
M L+ V LPL +++Y +T + ++ + G +LL +QN+C VYACLAVKRNAG+V T +HA AA+GYK+IAVPGFF+W ++ E L WLT + MG+T+++G
Sbjct: 4 MKLDGVQSLPLKFNSYAETVISMLRDRSSGLTDAKLLKPLQNVCIVYACLAVKRNAGMVFTQAKHATAAQGYKDIAVPGFFKWLQENLDKEDFFLQPWLTFEVMGKTSMKG 114 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig666.58.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 19
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig666.58.1 >prot_P-littoralis_Contig666.58.1 ID=prot_P-littoralis_Contig666.58.1|Name=mRNA_P-littoralis_Contig666.58.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=187bp IGSQEAFGFKIQIFGARAAPSRDGARSTTRSVTARTEQHRAQTMNLEKVMback to top mRNA from alignment at P-littoralis_Contig666:154202..155412+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig666.58.1 ID=mRNA_P-littoralis_Contig666.58.1|Name=mRNA_P-littoralis_Contig666.58.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=1211bp|location=Sequence derived from alignment at P-littoralis_Contig666:154202..155412+ (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig666:154202..155412+ >mRNA_P-littoralis_Contig666.58.1 ID=mRNA_P-littoralis_Contig666.58.1|Name=mRNA_P-littoralis_Contig666.58.1|organism=Pylaiella littoralis U1_48|type=CDS|length=561bp|location=Sequence derived from alignment at P-littoralis_Contig666:154202..155412+ (Pylaiella littoralis U1_48)back to top |