mRNA_P-littoralis_Contig666.45.4 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig666.45.4 vs. uniprot
Match: D8LBR6_ECTSI (Rab-GAP TBC domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LBR6_ECTSI) HSP 1 Score: 697 bits (1798), Expect = 2.180e-238 Identity = 440/632 (69.62%), Postives = 452/632 (71.52%), Query Frame = 2
Query: 503 QQPFSQSPGSASKLDSFFKRLGQGQSSRLWAGPAGRSGPVPGSLRTSRLHPRKE--DNPRPAGAVAATDDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNGVAGNDGRRRGSRTEDLSPFRTSEEWSERTGAG--------------SAGETPFGSGSGLRLSKSNSNGSQFGGPQVLGDDPLLGPPSPGPXLPPTAATSSPQAPSRTGPAEAESVAVAA-ARPXXXXXXXXXGKQPSTTTAGASAPLPATAPALTDKPSYRDKRFDDVLGEEVVKLDELRTLSWNGVPPVHRAAVWQLLVGYMPANRARRRAALERKRREYREAVPHYFDVPDAARSPQEQNILRQILVDVPRTCPDVPFFHQDKVQRAMERILYIWAIRHPASGYVQGINDLLTPLYVVFLSTHVGPSVESKDVSKVDETLLDQVEADVYWCLTKLLDNIQ----------------------------------------------DHYTAMQPGLQRMVLRLEELVQRIDADLHRHITDEGLMYIQFAFRWMNCLLMRELPQRAVVRAWDTYLAEENGFESFHVYVSAALLCHFSGTLREMDFQTMVMFLQDMPTKEWGEEEVEPLLSQAYILSTLFEGSPNHLGVAS 2209
Q+P + SPGS S LDSFFKRLGQGQSSRLWAGP GRSG VPGSLRTSRL PR D RPA A XXXXXXXXXXXXXXXXXXXXXXXX A ND RR EDLSPF T + WSE TG+G SA TPFG PP A T SPQ S A S + ++ XXXXXXXXX A A AP A APAL +PSYRDKRF+DVLGEEVV+LDELR LSWNGVPPVHRAAVWQLLVGYMPANRARR AALERKRREY EAVP YFDVPDAARS QEQNILRQILVDVPRTCPDVPFFHQDKVQRAMERILYIWAIRHPASGYVQGINDLLTPLYVVFLS HVGPSVESKDVSKVDE LLD+VEADVYWCLTKLLDNIQ DHYTAMQPGLQRMVLRLEELVQRIDADLHRHITDEGLMYIQFAFRWMNCLLMRELPQRAVVRAWDTYL+EENGFESFHVYVSAALLCHFSGTLREMDFQTMVMFLQDMPTKEWGEEEVEPLLSQAYILSTLFEGSPNHLG AS
Sbjct: 9 QKPLASSPGSVSNLDSFFKRLGQGQSSRLWAGP-GRSGAVPGSLRTSRLQPRNNSGDISRPAAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXN-------AENDRGRRIGTAEDLSPFGTRQGWSELTGSGGGGTGGVNRPGGGGSAXXTPFGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--XXXXPRPPNATTGSPQTLSAATAIGAGSASTKQQSKXXXXXXXXXXXXXXXXXXAAAQAPA-AAAPALATRPSYRDKRFEDVLGEEVVELDELRKLSWNGVPPVHRAAVWQLLVGYMPANRARREAALERKRREYWEAVPQYFDVPDAARSLQEQNILRQILVDVPRTCPDVPFFHQDKVQRAMERILYIWAIRHPASGYVQGINDLLTPLYVVFLSAHVGPSVESKDVSKVDEALLDEVEADVYWCLTKLLDNIQSLTGLVFVRRPPGLPDFYPGFMFLCRSLLLCTAVGVGCGGNRERSQDHYTAMQPGLQRMVLRLEELVQRIDADLHRHITDEGLMYIQFAFRWMNCLLMRELPQRAVVRAWDTYLSEENGFESFHVYVSAALLCHFSGTLREMDFQTMVMFLQDMPTKEWGEEEVEPLLSQAYILSTLFEGSPNHLGAAS 629
BLAST of mRNA_P-littoralis_Contig666.45.4 vs. uniprot
Match: A0A836C8P8_9STRA (Rab-GTPase-TBC domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C8P8_9STRA) HSP 1 Score: 450 bits (1157), Expect = 4.470e-146 Identity = 227/347 (65.42%), Postives = 259/347 (74.64%), Query Frame = 2
Query: 1199 ATAPALTDKPSYRDKRFDDVLGEEVVKLDELRTLSWNGVPPVHRAAVWQLLVGYMPANRARRRAALERKRREYREAVP-HYFDVPDAARSPQEQNILRQILVDVPRTCPDVPFFHQ-DKVQRAMERILYIWAIRHPASGYVQGINDLLTPLYVVFLSTHV-------GPSVESKDVSKVDETLLDQVEADVYWCLTKLLDNIQDHYTAMQPGLQRMVLRLEELVQRIDADLHRHITDEGLMYIQFAFRWMNCLLMRELPQRAVVRAWDTYLAEENG-FESFHVYVSAALLCHFSGTLREMDFQTMVMFLQDMPTKEWGEEEVEPLLSQAYILSTLFEGSPNHLGVAS 2209
A L +PS+RD ++ ++LG +VV L +LR L+WNGVPP +R VW+LL GYMPANR RR AAL RKRREY EAV H+ DAARS QEQ +LRQILVD+PRT PD P F + VQR+M R LY+WA RHPASGYVQGINDLLTP YVVFL HV + E L ++EAD YWCLTKLLDNIQDHYTAMQPGLQRMVLRLEELV+RID DLH H+ EG+ +IQFAFRWMNCLLMRELP A+VRAWDTYL+EE+G FESFHVYV AALLC FS L +DF +V+FLQDMPT+ W E +VEPLLSQAYILSTLFE S HL V S
Sbjct: 39 ADGAGLQSRPSFRDSKYSEILGADVVSLPDLRRLAWNGVPPAYRPTVWKLLCGYMPANRDRRAAALARKRREYAEAVAAHFAAAADAARSAQEQALLRQILVDIPRTAPDAPLFAEVAAVQRSMTRALYVWAQRHPASGYVQGINDLLTPFYVVFLGEHVVGGEGXXXXXXXXXXXXXLPEEALKEIEADAYWCLTKLLDNIQDHYTAMQPGLQRMVLRLEELVRRIDLDLHAHLAAEGVQFIQFAFRWMNCLLMRELPLPAIVRAWDTYLSEEDGGFESFHVYVCAALLCKFSPALLRLDFAALVLFLQDMPTRAWSEADVEPLLSQAYILSTLFENSSAHLNVTS 385
BLAST of mRNA_P-littoralis_Contig666.45.4 vs. uniprot
Match: A0A7S1U894_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1U894_9STRA) HSP 1 Score: 430 bits (1106), Expect = 4.070e-139 Identity = 201/326 (61.66%), Postives = 250/326 (76.69%), Query Frame = 2
Query: 1220 DKPSYRDKRFDDVLGEEVVKLDELRTLSWNGVPPVHRAAVWQLLVGYMPANRARRRAALERKRREYREAVPHYFDVPDAARSPQEQNILRQILVDVPRTCPDVPFFHQDKVQRAMERILYIWAIRHPASGYVQGINDLLTPLYVVFLSTHVGPSVESKDVSKVDETLLDQVEADVYWCLTKLLDNIQDHYTAMQPGLQRMVLRLEELVQRIDADLHRHITDEGLMYIQFAFRWMNCLLMRELPQRAVVRAWDTYLAEENGFESFHVYVSAALLCHFSGTLREMDFQTMVMFLQDMPTKEWGEEEVEPLLSQAYILSTLFEGSPNHL 2197
++ SY+D +F ++L EVV L+ L++L+WNGVP HR+ VW+L++GY+P+N +RR L+RKRREY E+VP YFD+PD R+ QEQ++LRQ+LVDVPRT P VP FH +++ R MERILYIWAIRHPASGYVQGIN LLTP ++VFLS +G + DV +VD +LD+VEAD YWC+TKLLD I DHYT PGL RM LE LV+RID L H DE L +QFAFRWMNCLLMREL A++R WDTYL+E++GFE+FH YV A LLCHFS LR M FQ +V+FLQD+PTKEWGE +VEPLLSQA+ILS F + HL
Sbjct: 17 ERMSYKDAQFAELLQAEVVDLERLKSLAWNGVPLGHRSMVWKLILGYLPSNASRRPGTLKRKRREYAESVPQYFDIPDQQRTSQEQDLLRQVLVDVPRTAPGVPLFHNERIHRCMERILYIWAIRHPASGYVQGINGLLTPFFLVFLSGLIGENAAYCDVGRVDAAVLDEVEADTYWCITKLLDAILDHYTEGTPGLTRMCRNLEHLVRRIDRPLAEHFDDEQLSTVQFAFRWMNCLLMRELNVNAIIRMWDTYLSEKDGFEAFHTYVCATLLCHFSEDLRGMKFQELVLFLQDLPTKEWGEAQVEPLLSQAFILSQAFTDAQKHL 342
BLAST of mRNA_P-littoralis_Contig666.45.4 vs. uniprot
Match: A0A7S2S4T0_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2S4T0_9STRA) HSP 1 Score: 415 bits (1067), Expect = 4.780e-131 Identity = 209/357 (58.54%), Postives = 264/357 (73.95%), Query Frame = 2
Query: 1151 GKQPSTTTAGASAPLPATAPALTDKP-SYRDKRFDDVLGE-EVVKLDELRTLSWNGVPPVHRAAVWQLLVGYMPANRARRRAALERKRREYREAVPHYFDVPDAARSPQEQNILRQILVDVPRTCPDVPFFHQDKVQRAMERILYIWAIRHPASGYVQGINDLLTPLYVVFLSTHV---GPSVESKDVSKVDETLLDQVEADVYWCLTKLLDNIQDHYTAMQPGLQRMVLRLEELVQRIDADLHRHITDEGLMYIQFAFRWMNCLLMRELPQRAVVRAWDTYLAEEN---GFESFHVYVSAALLCHFSGTLREMDFQTMVMFLQDMPTKEWGEEEVEPLLSQAYILSTLFEGSPNHL 2197
G+ P T G P A A A T P +YR++RF ++L + EVV L+EL+ LSW+GVP R VWQLL+ Y+P++R RR A L RKR+EY +AVP +FDVP A+R+ QEQ +LRQILVDVPRT PDVP FHQ +QR MER+LYIW+IRHPASGYVQG+NDL TPL+VVFLS V SVE+ D +++ + L VEAD YWCLTKLLDNIQDHYTA QPGLQR + RLEEL +RID+DLH H+ +EG+++ FAFRWMN LLMRELP +A++R WDT +E+ GFE FHV+V AA L FS ++ + + ++ FLQ PT+EWG EVE LLS+A+ILSTL+ SP+HL
Sbjct: 135 GEAPLGTQDGPELPSAAPAAAATAAPVTYRERRFRELLFDSEVVNLEELKKLSWSGVPSKWRPMVWQLLLAYLPSDRKRREATLTRKRKEYADAVPAFFDVPSASRTMQEQKMLRQILVDVPRTSPDVPLFHQAVIQRCMERLLYIWSIRHPASGYVQGMNDLATPLFVVFLSAAVERSSASVEAMDAARLSKEALTNVEADTYWCLTKLLDNIQDHYTAGQPGLQRQIFRLEELTRRIDSDLHLHLQNEGIVFSFFAFRWMNNLLMRELPLQAIIRLWDTLFSEDESGCGFEDFHVFVCAAFLKSFSSKIQTLAGEELMCFLQAFPTREWGGTEVETLLSEAFILSTLYRNSPSHL 491
BLAST of mRNA_P-littoralis_Contig666.45.4 vs. uniprot
Match: A0A8K1FHD0_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FHD0_PYTOL) HSP 1 Score: 402 bits (1034), Expect = 1.870e-126 Identity = 195/346 (56.36%), Postives = 251/346 (72.54%), Query Frame = 2
Query: 1172 TAGASAPLPATAPALTDKPS---YRDKRFDDVLGEEVVKLDELRTLSWNGVPPVHRAAVWQLLVGYMPANRARRRAALERKRREYREAVPHYFDVPDAARSPQEQNILRQILVDVPRTCPDVPFFHQDKVQRAMERILYIWAIRHPASGYVQGINDLLTPLYVVFLSTHVGPSVESKDVSKVDETLLDQVEADVYWCLTKLLDNIQDHYTAMQPGLQRMVLRLEELVQRIDADLHRHITD-EGLMYIQFAFRWMNCLLMRELPQRAVVRAWDTYLAEENGFESFHVYVSAALLCHFSGTLREMDFQTMVMFLQDMPTKEWGEEEVEPLLSQAYILSTLFEGSPNHL 2197
TA SAP P+ P + + + +R ++F+ VL E V LD+LR LSW G+P HR W+LL+GYMP+ + RR A L+RKR+EY+E + Y+ +PD R +EQ LRQILVD+PRT DV F +++ + MER+LY WAIRHPASGYVQGINDLLTP VVFL T + D+S V + L+ +EAD YWCLTKLLD IQDHYT QPGLQRMV R+EELV R D DL +HI + E + ++QFAFRWMNCLLMRE+P A++R WDTYL E+NGFESFHVYV AA+L F L+ ++FQ +V+FLQ +PTK+W E+E++PLLS+A+IL T F SP+HL
Sbjct: 137 TAPTSAPTPSAPPRSSSRNAAGNHRCEQFNQVLRNENVDLDKLRELSWGGIPYDHRPTAWRLLLGYMPSKQDRREAMLQRKRQEYKELLQQYYYIPDTDRGSKEQGTLRQILVDIPRTNADVRLFQDERIHQCMERVLYTWAIRHPASGYVQGINDLLTPFLVVFL-TEFMDDPPTGDLSIVSDERLETIEADSYWCLTKLLDGIQDHYTFAQPGLQRMVQRMEELVHRCDVDLFKHIVERENVQFVQFAFRWMNCLLMREVPLTAIIRIWDTYLCEDNGFESFHVYVCAAILMTFGEKLKTLEFQDLVLFLQHLPTKDWSEDEIDPLLSRAFILQTYFADSPSHL 481
BLAST of mRNA_P-littoralis_Contig666.45.4 vs. uniprot
Match: K3W8M6_GLOUD (Rab-GAP TBC domain-containing protein n=2 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3W8M6_GLOUD) HSP 1 Score: 399 bits (1026), Expect = 2.630e-125 Identity = 188/324 (58.02%), Postives = 244/324 (75.31%), Query Frame = 2
Query: 1229 SYRDKRFDDVLGEEVVKLDELRTLSWNGVPPVHRAAVWQLLVGYMPANRARRRAALERKRREYREAVPHYFDVPDAARSPQEQNILRQILVDVPRTCPDVPFFHQDKVQRAMERILYIWAIRHPASGYVQGINDLLTPLYVVFLSTHVGPSVESKDVSKVDETLLDQVEADVYWCLTKLLDNIQDHYTAMQPGLQRMVLRLEELVQRIDADLHRHITD-EGLMYIQFAFRWMNCLLMRELPQRAVVRAWDTYLAEENGFESFHVYVSAALLCHFSGTLREMDFQTMVMFLQDMPTKEWGEEEVEPLLSQAYILSTLFEGSPNHL 2197
++R ++F +L +VV LD++R LSW G+P HR W+LL+GYMP+ + RR A L+RKR+EY E + Y+ +PD R +EQ LRQILVD+PRT DV F ++++ + MER+LY WAIRHPASGYVQGINDLLTP VVFLS +V ++ D+S V + L VEAD YWCLTKLLD IQDHYT QPGLQRMV R+EELV R D DL +HI + EG+ ++QFAFRWMNCLLMRE+P A++R WDTYL E++GFESFHVYV AA+L F L+ ++FQ +V+FLQ +PTK+W E+E++PLLS+A+IL T F SP+HL
Sbjct: 158 NHRSEQFHQMLKSDVVDLDKMRELSWGGIPVHHRPTAWRLLLGYMPSKQDRREAMLQRKRQEYVELLQQYYYIPDTDRGAKEQTTLRQILVDIPRTNADVKLFQEERIHQLMERVLYTWAIRHPASGYVQGINDLLTPFLVVFLSAYVDEP-QTCDLSVVSDESLQTVEADSYWCLTKLLDGIQDHYTFAQPGLQRMVQRMEELVHRCDGDLFKHIVEREGVQFVQFAFRWMNCLLMREVPLNAIIRLWDTYLCEDSGFESFHVYVCAAILMTFGEKLKTLEFQDLVLFLQHLPTKDWVEDEIDPLLSRAFILQTYFADSPSHL 480
BLAST of mRNA_P-littoralis_Contig666.45.4 vs. uniprot
Match: K0SU51_THAOC (Rab-GAP TBC domain-containing protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0SU51_THAOC) HSP 1 Score: 398 bits (1022), Expect = 5.150e-125 Identity = 186/342 (54.39%), Postives = 248/342 (72.51%), Query Frame = 2
Query: 1184 SAPLPATAPALTDKPSYRDKRFDDVLGEEVVKLDELRTLSWNGVPPVHRAAVWQLLVGYMPANRARRRAALERKRREYREAVPHYFDVPDAARSPQEQNILRQILVDVPRTCPDVPFFHQDKVQRAMERILYIWAIRHPASGYVQGINDLLTPLYVVFLSTHVGPS--VESKDVSKVDETLLDQVEADVYWCLTKLLDNIQDHYTAMQPGLQRMVLRLEELVQRIDADLHRHITDEGLMYIQFAFRWMNCLLMRELPQRAVVRAWDTYLAEENGFESFHVYVSAALLCHFSGTLREMDFQTMVMFLQDMPTKEWGEEEVEPLLSQAYILSTLFEGSPNHLGV 2203
S+ P P +T YR+++FD +L +V + ELR LSWNGVP R VW++L+GY+PAN +R +R+RREY++++ ++D+PD +R+ EQ LRQ+LVDVPRT PDVP FH D+V+R + R+LYIWA+RHPAS YVQGINDL TPL VFLS + ++ + + V +++L++VEAD YWCLT LL IQDHYT+ QPG+QRMV+ LEELV RIDADL H+ + G+ +IQFAF+WMNCLL+RE V+R WDTYL+EE GFE FHVYV A+ L HFS L++M F + F+Q+MPT +WG+ E E LLS A++LSTLF+GS HL V
Sbjct: 120 SSTTPRNYPPIT----YRERQFDIMLNSPIVPVRELRKLSWNGVPAPLRPKVWKILLGYLPANSSRHETTYKRRRREYKDSIKQHYDIPDDSRTNSEQETLRQVLVDVPRTAPDVPLFHNDRVRRCLSRLLYIWAMRHPASSYVQGINDLATPLISVFLSGYFEGEDCLDGERMQDVTDSILEEVEADTYWCLTNLLAGIQDHYTSDQPGMQRMVMHLEELVSRIDADLASHLKNTGIEFIQFAFKWMNCLLLREFKLSCVMRLWDTYLSEERGFEEFHVYVCASFLVHFSAELQQMGFDELFQFMQNMPTHDWGDRECEILLSSAFVLSTLFKGSEAHLNV 457
BLAST of mRNA_P-littoralis_Contig666.45.4 vs. uniprot
Match: A0A5D6Y7I2_9STRA (Rab-GAP TBC domain-containing protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6Y7I2_9STRA) HSP 1 Score: 397 bits (1021), Expect = 1.430e-124 Identity = 189/324 (58.33%), Postives = 244/324 (75.31%), Query Frame = 2
Query: 1229 SYRDKRFDDVLGEEVVKLDELRTLSWNGVPPVHRAAVWQLLVGYMPANRARRRAALERKRREYREAVPHYFDVPDAARSPQEQNILRQILVDVPRTCPDVPFFHQDKVQRAMERILYIWAIRHPASGYVQGINDLLTPLYVVFLSTHVGPSVESKDVSKVDETLLDQVEADVYWCLTKLLDNIQDHYTAMQPGLQRMVLRLEELVQRIDADLHRHITD-EGLMYIQFAFRWMNCLLMRELPQRAVVRAWDTYLAEENGFESFHVYVSAALLCHFSGTLREMDFQTMVMFLQDMPTKEWGEEEVEPLLSQAYILSTLFEGSPNHL 2197
++R ++F +L +VV LD+LR LSW GVP HR A W+LL+GYMP+ RR L+RKR+EY + Y+ +PD R +EQ LRQILVD+PRT DV F ++++ + MER+LY WAIRHPASGYVQGINDLLTP VVFLS +V ++ ++++V + L VEAD YWCLTKLLD IQDHYT QPGLQRMV R+EELV R D+DL +HI + EG+ ++QFAFRWMNCLLMRE+P A+VR WDTYL E+NGFESFHVYV AA+L F L+ ++FQ +V+FLQ +PTK+W E+E++PLLS+A+IL T F SP+HL
Sbjct: 158 NHRSEQFRAMLQSDVVDLDKLRELSWGGVPVHHRPAAWRLLLGYMPSKLDRREPMLQRKRQEYGNLLQQYYYIPDTDRGDKEQTTLRQILVDIPRTNADVKLFKEERIHQLMERVLYTWAIRHPASGYVQGINDLLTPFLVVFLSAYVDEP-QTCELAEVSDEALQTVEADSYWCLTKLLDGIQDHYTFAQPGLQRMVQRMEELVHRCDSDLFKHIVEREGVQFVQFAFRWMNCLLMREVPLDAIVRLWDTYLCEDNGFESFHVYVCAAILMTFGEQLKALEFQDLVVFLQHLPTKDWAEDEIDPLLSRAFILQTYFADSPSHL 480
BLAST of mRNA_P-littoralis_Contig666.45.4 vs. uniprot
Match: F0WSS9_9STRA (Uncharacterized protein AlNc14C238G9425 n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0WSS9_9STRA) HSP 1 Score: 398 bits (1022), Expect = 1.500e-124 Identity = 191/339 (56.34%), Postives = 247/339 (72.86%), Query Frame = 2
Query: 1235 RDKRFDDVLGEEVVKLDELRTLSWNGVPPVHRAAVWQLLVGYMPANRARRRAALERKRREYREAVPHYFDVPDAARSPQEQNILRQILVDVPRTCPDVPFFHQDKVQRAMERILYIWAIRHPASGYVQGINDLLTPLYVVFLSTHVGPSVESKDVS------KVDETL-----------LDQVEADVYWCLTKLLDNIQDHYTAMQPGLQRMVLRLEELVQRIDADLHRHITD-EGLMYIQFAFRWMNCLLMRELPQRAVVRAWDTYLAEENGFESFHVYVSAALLCHFSGTLREMDFQTMVMFLQDMPTKEWGEEEVEPLLSQAYILSTLFEGSPNHL 2197
R ++ + +V+ LD+LR LSW G+P +R+ W+LL+GYMP + RR A +ERKR+EY + + Y+ +PD R +EQN LRQILVD+PRT DVP F +++ ++MERILYIWAIRHPASGYVQGINDLLTP VVFL+T VG + ++ + D+ L L QVEAD YWCLTKLLD IQDHYT QPGLQRMV R+E+LV R D++L+RHI + E + ++QFAFRWMNCLLMRE+P A+VR WDTYL E+NGFESFHVYV AA+L F L+EM+FQ +V+FLQ +PTK+W EE+++PLLS+A+IL T F +PNHL
Sbjct: 154 RAEQLSQLFENDVIDLDKLRELSWGGIPQEYRSNAWKLLLGYMPTKKDRREAMIERKRQEYIDLLRQYYYIPDTDRGLKEQNTLRQILVDIPRTNADVPLFKNERIHQSMERILYIWAIRHPASGYVQGINDLLTPFLVVFLTTFVGKFIFISSIAITLTPTRTDKPLYAALDEFPEKSLQQVEADSYWCLTKLLDGIQDHYTFAQPGLQRMVQRMEDLVNRCDSNLYRHIVEKEAVQFVQFAFRWMNCLLMREIPLEAIVRVWDTYLCEDNGFESFHVYVCAAILMTFGEQLKEMEFQELVLFLQSLPTKDWTEEQIDPLLSRAFILQTYFADAPNHL 492
BLAST of mRNA_P-littoralis_Contig666.45.4 vs. uniprot
Match: A0A3F2RUN4_9STRA (Rab-GAP TBC domain-containing protein n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3F2RUN4_9STRA) HSP 1 Score: 398 bits (1022), Expect = 2.570e-124 Identity = 197/337 (58.46%), Postives = 248/337 (73.59%), Query Frame = 2
Query: 1202 TAPALTDKPS----YRDKRFDDVLGEEVVKLDELRTLSWNGVPPVHRAAVWQLLVGYMPANRARRRAALERKRREYREAVPHYFDVPDAARSPQEQNILRQILVDVPRTCPDVPFFHQDKVQRAMERILYIWAIRHPASGYVQGINDLLTPLYVVFLSTHVGPSVESKDVSKVDETLLDQVEADVYWCLTKLLDNIQDHYTAMQPGLQRMVLRLEELVQRIDADLHRHITD-EGLMYIQFAFRWMNCLLMRELPQRAVVRAWDTYLAEENGFESFHVYVSAALLCHFSGTLREMDFQTMVMFLQDMPTKEWGEEEVEPLLSQAYILSTLFEGSPNHL 2197
TAPA + R +F+ +L +EVV LD+LR LSW GVP +R VW+LL+GYMP+ + RR A LERKR+EY E + Y+ +PD R +EQ LRQILVD+PRT DV F +++ + MER+LYIW+IRHPASGYVQGINDL+TP VVFLS V ++ D+S V + L VEAD YWCLTKLLD+IQDHYT QPGLQRMV R+EELV R DADL +HI + E + ++QFAFRWMNCLLMRELP +VR WDTYL E++GFESFHVYV AA+L F TL+ ++FQ +V+FLQ +PTK+W E E+EPLLS+A+IL T F +P+HL
Sbjct: 174 TAPAANSSRNASGHLRFAQFERLLKKEVVDLDQLRKLSWGGVPTNYRPTVWRLLLGYMPSKQDRRAAMLERKRQEYVELLQQYYYIPDTDRGTREQTTLRQILVDIPRTNADVKLFQNERIHQCMERVLYIWSIRHPASGYVQGINDLMTPFLVVFLSAFVEEP-QTCDLSGVSDENLQIVEADSYWCLTKLLDDIQDHYTFAQPGLQRMVQRMEELVHRCDADLFQHIVERENVQFVQFAFRWMNCLLMRELPLDGIVRIWDTYLCEDSGFESFHVYVCAAILMTFGETLKTLEFQDLVLFLQSLPTKDWVENEIEPLLSRAFILQTYFADAPSHL 509 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig666.45.4 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig666.45.4 >prot_P-littoralis_Contig666.45.4 ID=prot_P-littoralis_Contig666.45.4|Name=mRNA_P-littoralis_Contig666.45.4|organism=Pylaiella littoralis U1_48|type=polypeptide|length=585bp MDKSPSPVPQNNQQQQQPFSQSPGSASKLDSFFKRLGQGQSSRLWAGPAGback to top mRNA from alignment at P-littoralis_Contig666:119977..125421- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig666.45.4 ID=mRNA_P-littoralis_Contig666.45.4|Name=mRNA_P-littoralis_Contig666.45.4|organism=Pylaiella littoralis U1_48|type=mRNA|length=5445bp|location=Sequence derived from alignment at P-littoralis_Contig666:119977..125421- (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig666:119977..125421- >mRNA_P-littoralis_Contig666.45.4 ID=mRNA_P-littoralis_Contig666.45.4|Name=mRNA_P-littoralis_Contig666.45.4|organism=Pylaiella littoralis U1_48|type=CDS|length=1755bp|location=Sequence derived from alignment at P-littoralis_Contig666:119977..125421- (Pylaiella littoralis U1_48)back to top |