mRNA_P-littoralis_Contig666.17.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig666.17.1 vs. uniprot
Match: D7G5Z1_ECTSI (TOG domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5Z1_ECTSI) HSP 1 Score: 238 bits (607), Expect = 2.300e-68 Identity = 136/262 (51.91%), Postives = 179/262 (68.32%), Query Frame = 1
Query: 1 QGDIFEAKVLETSELPVSSDVAKSLEAVRTPIDEGGWACLFDVVSSVRTLLVHHQEVFQEQEREEVPRLLGVVVPLVATAVSHRRSVVQTNGLRCLADMFGAV-GKALAASEMGVLVRAAGACFKSSHKFFLEETEKAMAAAVANAEPALLLDAVLPQALDGHLKVAGQGMIYAEQCLARLQAGDVPESGLMDTVDIKALMIALVKGAKSKAPDAKDAAWRAVERCQKAFGVEMFKEAMAEHAGQGAVRVIDDLVVAKNRQR 783
QG+IF+ L +SE+P S DV+K LEAVRT WA LF VSS RTL++HH+++F ++ P L+G +V LVA AVS+RRSVVQTNGLRCL +MF V GK + A +MG LVR+ +C KSS KF EE KAM AA+ANA+P LL AVLP ALD H KVA +G++ +CL+RL G V GL+D VD+K+++ AL KGA S+ D K+AAWR VE C+KA G ++F+ + EH + VR I D+V K R++
Sbjct: 438 QGEIFDVVALTSSEVPASVDVSKDLEAVRTHSGVTDWASLFAAVSSARTLVLHHRDMFGGEDGG--PGLIGRLVSLVADAVSNRRSVVQTNGLRCLGEMFSCVVGKEMTADQMGTLVRSTLSCHKSSSKFCGEEARKAMEAALANADPEPLLSAVLPLALDRHPKVACRGLMCTAECLSRLLEGSVAGRGLVDGVDVKSVLAALAKGASSRDSDGKEAAWRGVEMCRKALGEDVFEATITEHLDRKGVRAIRDMVSDKGRRK 697
BLAST of mRNA_P-littoralis_Contig666.17.1 vs. uniprot
Match: D7G7P4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7P4_ECTSI) HSP 1 Score: 207 bits (527), Expect = 2.940e-62 Identity = 121/224 (54.02%), Postives = 154/224 (68.75%), Query Frame = 1
Query: 1 QGDIFEAKVLETSELPVSSDVAKSLEAVRTPIDEGGWACLFDVVSSVRTLLVHHQEVFQEQEREEVPRLLGVVVPLVATAVSHRRSVVQTNGLRCLADMFGAV-GKALAASEMGVLVRAAGACFKSSHKFFLEETEKAMAAAVANAEPALLLDAVLPQALDGHLKVAGQGMIYAEQCLARLQAGDVPESGLMDTVDIKALMIALVKGAKSKAPDAKDAAWRAVE 669
QG+IF+ L +SE+P S DV+K LEAVR WA LF VSS RTL++HH+++F + P L+G +V LVA AVS+RRSVVQTNGLRCL +MF V GK + A +MG LVR+ +C KSS KF EE KAM AA+ANA+P LL AVLP ALD H KVA +G++ +CL+RL G V GL+D VD+K+++ AL KGA S+ D K+AAWR VE
Sbjct: 33 QGEIFDVVALTSSEVPASVDVSKDLEAVRIRSGVTDWASLFAAVSSARTLVLHHRDMFGGENGG--PGLIGRLVSLVADAVSNRRSVVQTNGLRCLGEMFSCVVGKEMTADQMGTLVRSTLSCHKSSSKFCGEEARKAMEAALANADPEPLLSAVLPLALDTHPKVACRGLMCTAECLSRLLEGSVAGRGLVDGVDVKSVVAALAKGASSRDSDGKEAAWRGVE 254
BLAST of mRNA_P-littoralis_Contig666.17.1 vs. uniprot
Match: A0A6H5K4X8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K4X8_9PHAE) HSP 1 Score: 218 bits (555), Expect = 2.470e-60 Identity = 141/321 (43.93%), Postives = 183/321 (57.01%), Query Frame = 1
Query: 1 QGDIFEAKVLETSELPVSSDVAKSLEAVRTPIDEGGWACLFDVVSSVRTLLVHHQEVFQEQEREEVPRLLGVVVPLVATAVSHRRSVVQTNGLRCLADMFGAV------------------------------------GKALAASEMGVLVRAAGACFKSSHKFFLEETEKAMAAAVANAEPALLLDAVLPQALDGHLKVAGQGMIYAEQCLARLQAGDVPESGLMDTVDIKALMIALVKGAKSKAPDAKDAAWRAVERCQKAFGVEMFKEAMAEHAGQGAVRVIDDLVVAKNRQREWQTKAAASGPTAAPRSGRFSGGR 855
QG+IF+ L++SE+P S D ++ V+ WA LF VSS R LL+HH++VF + E P L+G +V LVA AVS+RRSVVQTNGLRCL +MF V G + A +MG LVR+ +C KSS F EE +KAM AA+ANA+P LL AVLPQALD H KVA G+IY +CL+RL G V GL D VD+ +++ AL KGA S+ D KDAAW VE C+KA G ++F+ +AEH Q VR I DLV K R++ + AA AA +G+ + GR
Sbjct: 687 QGEIFDVVALKSSEVPASVDAVQATVVVKD------WASLFAAVSSARVLLLHHRDVFGREY--EGPGLIGQLVSLVADAVSNRRSVVQTNGLRCLGEMFRCVLDVVMLACDVELKSLGCVPGSSRLGSRAQATAICVVGNGMTADQMGTLVRSTLSCHKSSSTFCGEEAKKAMEAALANADPVPLLSAVLPQALDRHPKVARLGVIYTAECLSRLHEGSVVGGGLADDVDVMSVVAALAKGASSRDSDGKDAAWSGVEMCRKALGHDVFEATIAEHLDQKGVRAIRDLVSDKARRKTRTAREAA----AAVGAGKATAGR 995
BLAST of mRNA_P-littoralis_Contig666.17.1 vs. uniprot
Match: A0A6H5JX13_9PHAE (MCM domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JX13_9PHAE) HSP 1 Score: 175 bits (444), Expect = 1.230e-46 Identity = 102/184 (55.43%), Postives = 126/184 (68.48%), Query Frame = 1
Query: 121 FDVVSSVRTLLVHHQEVFQEQEREEVPRLLGVVVPLVATAVSHRRSVVQTNGLRCLADMFGAV-GKALAASEMGVLVRAAGACFKSSHKFFLEETEKAMAAAVANAEPALLLDAVLPQALDGHLKVAGQGMIYAEQCLARLQAGDVPESGLMDTVDIKALMIALVKGAKSKAPDAKDAAWRAVE 669
F VSS RTLL+HH + + ++ PRL+G +V LV AVS+RRSVVQTNGLRCL +MF V G + A +MG LVR+ +C KSS KF EE +KAM AA ANA+PA LL AVLPQA D H KVA G+IY +CL+RL G V GL+D VD+ +++ AL KGA S+ D KDAAW VE
Sbjct: 411 FAAVSSARTLLLHHPDELEGEDGG--PRLIGRLVSLVVDAVSNRRSVVQTNGLRCLGEMFSCVVGNGMTADQMGTLVRSTLSCHKSSSKFCGEEAKKAMEAAQANADPAPLLSAVLPQAFDRHPKVARLGVIYTAECLSRLHEGSVAGGGLVDGVDVMSVVAALAKGATSRDSDGKDAAWSGVE 592
BLAST of mRNA_P-littoralis_Contig666.17.1 vs. uniprot
Match: D7FH72_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FH72_ECTSI) HSP 1 Score: 154 bits (389), Expect = 3.440e-38 Identity = 93/174 (53.45%), Postives = 118/174 (67.82%), Query Frame = 1
Query: 1 QGDIFEAKVLETSELPVSSDVAKSLEAVRTPIDEGGWACLFDVVSSVRTLLVHHQEVFQEQEREEVPRLLGVVVPLVATAVSHRRSVVQTNGLRCLADMFGAV-GKALAASEMGVLVRAAGACFKSSHKFFLEETEKAMAAAVANAEPALLLDAVLPQALDGHLK-VAGQGMIY 516
QG IF+ L++SE+P S D++K LEAVR WA LF VSS RTL++HH+++F + P L+G +V LVA AVS+RRSVVQTNGLRCL +MF V GK + A +MG LVR+ +C KSS KF EE KAM AA+ANA+P LL AVLP ALD H K A +G ++
Sbjct: 717 QGQIFDVVALKSSEVPASVDISKDLEAVRIRSGVTDWASLFAAVSSARTLVLHHRDMFGGENGG--PGLIGRLVSLVADAVSNRRSVVQTNGLRCLGEMFSCVVGKEMTADQMGTLVRSTLSCHKSSSKFCGEEARKAMEAALANADPEPLLSAVLPLALDTHPKRAAWRGAVW 888 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig666.17.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 5
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig666.17.1 >prot_P-littoralis_Contig666.17.1 ID=prot_P-littoralis_Contig666.17.1|Name=mRNA_P-littoralis_Contig666.17.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=321bp QGDIFEAKVLETSELPVSSDVAKSLEAVRTPIDEGGWACLFDVVSSVRTLback to top mRNA from alignment at P-littoralis_Contig666:47146..51292+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig666.17.1 ID=mRNA_P-littoralis_Contig666.17.1|Name=mRNA_P-littoralis_Contig666.17.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=4147bp|location=Sequence derived from alignment at P-littoralis_Contig666:47146..51292+ (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig666:47146..51292+ >mRNA_P-littoralis_Contig666.17.1 ID=mRNA_P-littoralis_Contig666.17.1|Name=mRNA_P-littoralis_Contig666.17.1|organism=Pylaiella littoralis U1_48|type=CDS|length=963bp|location=Sequence derived from alignment at P-littoralis_Contig666:47146..51292+ (Pylaiella littoralis U1_48)back to top |