mRNA_P-littoralis_Contig664.7.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig664.7.1 vs. uniprot
Match: A0A6H5K6I9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K6I9_9PHAE) HSP 1 Score: 134 bits (336), Expect = 4.580e-36 Identity = 67/78 (85.90%), Postives = 73/78 (93.59%), Query Frame = 1
Query: 31 ILEHRFAHIRAGLGTLRNPTAAQAKERSVRGDLNRGLHGGSRANFNRNARSGDDFNVSDYRAKIMLAVSEAETAENVR 264
ILEHRF +RAGLGTLRNPTAAQAKERSVRGDLNRGLHGGSRANFNRNARSG+DF SDYR++IMLAV++AE AENVR
Sbjct: 239 ILEHRFKDVRAGLGTLRNPTAAQAKERSVRGDLNRGLHGGSRANFNRNARSGNDFIDSDYRSRIMLAVTQAEAAENVR 316
BLAST of mRNA_P-littoralis_Contig664.7.1 vs. uniprot
Match: D7FZI2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZI2_ECTSI) HSP 1 Score: 131 bits (330), Expect = 1.040e-33 Identity = 66/72 (91.67%), Postives = 69/72 (95.83%), Query Frame = 1
Query: 49 AHIRAGLGTLRNPTAAQAKERSVRGDLNRGLHGGSRANFNRNARSGDDFNVSDYRAKIMLAVSEAETAENVR 264
AHIRAGLGTLRNPTAAQAKERSVRGDLNRGLHGGSRANFNRNARSGDDFNVSDYR +IMLAV++A AENVR
Sbjct: 917 AHIRAGLGTLRNPTAAQAKERSVRGDLNRGLHGGSRANFNRNARSGDDFNVSDYRGRIMLAVTQAVAAENVR 988
BLAST of mRNA_P-littoralis_Contig664.7.1 vs. uniprot
Match: A0A6H5L2C2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L2C2_9PHAE) HSP 1 Score: 105 bits (262), Expect = 6.740e-27 Identity = 53/86 (61.63%), Postives = 64/86 (74.42%), Query Frame = 1
Query: 7 RGAPRQRDILEHRFAHIRAGLGTLRNPTAAQAKERSVRGDLNRGLHGGSRANFNRNARSGDDFNVSDYRAKIMLAVSEAETAENVR 264
RGA RQRD +EHRF H R GLG+ RNPTA QAKER+ RGDLNRGL GGSRAN NR +R G+DF S R +I+L V++ E + +R
Sbjct: 60 RGASRQRDPVEHRFGHTRQGLGSHRNPTATQAKERAARGDLNRGLQGGSRANHNRTSRKGNDFIASGVRGQIILPVTDEERSATMR 145
BLAST of mRNA_P-littoralis_Contig664.7.1 vs. uniprot
Match: A0A6H5JR14_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JR14_9PHAE) HSP 1 Score: 102 bits (253), Expect = 2.550e-23 Identity = 49/79 (62.03%), Postives = 59/79 (74.68%), Query Frame = 1
Query: 28 DILEHRFAHIRAGLGTLRNPTAAQAKERSVRGDLNRGLHGGSRANFNRNARSGDDFNVSDYRAKIMLAVSEAETAENVR 264
D++EH F H+R GLG+ RNPTAAQAKER RGD+ RGLHG RAN+NRNAR G DF S YRA++ML V E E + +R
Sbjct: 660 DVIEHCFGHMRQGLGSHRNPTAAQAKERGARGDILRGLHGPCRANYNRNARKGRDFVASGYRAEVMLPVGEGERSVRIR 738
BLAST of mRNA_P-littoralis_Contig664.7.1 vs. uniprot
Match: A0A6H5K5X1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K5X1_9PHAE) HSP 1 Score: 87.4 bits (215), Expect = 3.460e-18 Identity = 43/79 (54.43%), Postives = 56/79 (70.89%), Query Frame = 1
Query: 28 DILEHRFAHIRAGLGTLRNPTAAQAKERSVRGDLNRGLHGGSRANFNRNARSGDDFNVSDYRAKIMLAVSEAETAENVR 264
DI EHR+ H+ GLG+ NPT A+AKER+ RGDL R LHG SRA N+NAR G+DF S R +I+L V++AE + +R
Sbjct: 530 DIEEHRYGHMHQGLGSHSNPTCAEAKERAERGDLQRSLHGVSRAKHNQNARKGEDFIASGIRGRIILPVTDAERSATMR 608
BLAST of mRNA_P-littoralis_Contig664.7.1 vs. uniprot
Match: A0A6H5K630_9PHAE (Uncharacterized protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K630_9PHAE) HSP 1 Score: 81.3 bits (199), Expect = 7.730e-18 Identity = 41/70 (58.57%), Postives = 51/70 (72.86%), Query Frame = 1
Query: 55 IRAGLGTLRNPTAAQAKERSVRGDLNRGLHGGSRANFNRNARSGDDFNVSDYRAKIMLAVSEAETAENVR 264
+R GLG+ RNPTA QAKER+ RGDLNRGL GGSRAN NR +R G DF S R +I+L V++ E + +R
Sbjct: 1 MRQGLGSHRNPTATQAKERAARGDLNRGLRGGSRANHNRTSRKGSDFIASGVRGQIILPVTDEERSATMR 70
BLAST of mRNA_P-littoralis_Contig664.7.1 vs. uniprot
Match: A0A6H5KB63_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KB63_9PHAE) HSP 1 Score: 77.8 bits (190), Expect = 7.350e-17 Identity = 40/70 (57.14%), Postives = 50/70 (71.43%), Query Frame = 1
Query: 55 IRAGLGTLRNPTAAQAKERSVRGDLNRGLHGGSRANFNRNARSGDDFNVSDYRAKIMLAVSEAETAENVR 264
+R LG+ NP AAQAKER+ RGDL R LHG SRAN N+NAR G+DF S R +IML V++AE + +R
Sbjct: 1 MRQSLGSHSNPIAAQAKERTARGDLQRSLHGVSRANHNKNARKGEDFIASGIRGRIMLPVTDAERSATMR 70
BLAST of mRNA_P-littoralis_Contig664.7.1 vs. uniprot
Match: A0A6H5K5I6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K5I6_9PHAE) HSP 1 Score: 75.9 bits (185), Expect = 1.510e-14 Identity = 46/83 (55.42%), Postives = 55/83 (66.27%), Query Frame = 1
Query: 28 DILEHRFAHIRAGLGTLRNPTAAQAKERSVRGDLNRGLHGGSRANFNRN--ARSGDDFNVSDYRAK--IMLAVSEAETAENVR 264
DI EHRF+HIRA LGT RNPTA +AK+RS GDL R +G R N +RN ARSG DF K I+LAV++ ET + VR
Sbjct: 180 DICEHRFSHIRAALGTHRNPTAREAKKRSAVGDLCRATNGKRRRNASRNPNARSGGDFEEHGDSEKKAIILAVTKVETGKEVR 262
BLAST of mRNA_P-littoralis_Contig664.7.1 vs. uniprot
Match: A0A6H5JTX6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTX6_9PHAE) HSP 1 Score: 69.7 bits (169), Expect = 1.880e-12 Identity = 38/67 (56.72%), Postives = 46/67 (68.66%), Query Frame = 1
Query: 28 DILEHRFAHIRAGLGTLRNPTAAQAKERSVRGDLNRGLHGGSRANFNRNARSGDDFNVSDYRAKIML 228
DI+EHR+ H+ LG+ NPTAAQAKER+ + DL R LHG SRAN AR G+DF S R +IML
Sbjct: 145 DIVEHRYGHMCQCLGSHCNPTAAQAKERAAQEDLQRSLHGISRANH---ARKGEDFIASGIRGRIML 208
BLAST of mRNA_P-littoralis_Contig664.7.1 vs. uniprot
Match: A0A6H5K7Z3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K7Z3_9PHAE) HSP 1 Score: 58.9 bits (141), Expect = 3.620e-8 Identity = 37/80 (46.25%), Postives = 48/80 (60.00%), Query Frame = 1
Query: 28 DILEHRFAHIRAGLGTLRNPTAAQAKERSVRGDLNRGLHGGSRANFNRNARSGDDFNVSDYRA-KIMLAVSEAETAENVR 264
DILEHRFAHIR+G GT +NPTA QA E + GD R HG R N +R+A G F + D + + + +E A+ VR
Sbjct: 576 DILEHRFAHIRSGRGTHKNPTAMQAIEAARAGDTARMFHGTRRRNSSRSA--GMAFQLEDSQGVRAAFPANASERAQVVR 653 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig664.7.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 12
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig664.7.1 >prot_P-littoralis_Contig664.7.1 ID=prot_P-littoralis_Contig664.7.1|Name=mRNA_P-littoralis_Contig664.7.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=88bp ESRGAPRQRDILEHRFAHIRAGLGTLRNPTAAQAKERSVRGDLNRGLHGGback to top mRNA from alignment at P-littoralis_Contig664:12383..12924- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig664.7.1 ID=mRNA_P-littoralis_Contig664.7.1|Name=mRNA_P-littoralis_Contig664.7.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=542bp|location=Sequence derived from alignment at P-littoralis_Contig664:12383..12924- (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig664:12383..12924- >mRNA_P-littoralis_Contig664.7.1 ID=mRNA_P-littoralis_Contig664.7.1|Name=mRNA_P-littoralis_Contig664.7.1|organism=Pylaiella littoralis U1_48|type=CDS|length=264bp|location=Sequence derived from alignment at P-littoralis_Contig664:12383..12924- (Pylaiella littoralis U1_48)back to top |