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Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Stop | 1 |
| Start | 1 |
| Model size | 381 |
| Hectar predicted targeting category | other localisation |
| Exons | 2 |
| Cds size | 309 |
Relationships
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1680791381.8619587-UTR-P-littoralis_Contig661:154588..154608 | 1680791381.8619587-UTR-P-littoralis_Contig661:154588..154608 | Pylaiella littoralis U1_48 | UTR | P-littoralis_Contig661 154589..154608 + |
| 1680791381.9019966-UTR-P-littoralis_Contig661:162243..162295 | 1680791381.9019966-UTR-P-littoralis_Contig661:162243..162295 | Pylaiella littoralis U1_48 | UTR | P-littoralis_Contig661 162244..162295 + |
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1680791381.8813183-CDS-P-littoralis_Contig661:154608..154671 | 1680791381.8813183-CDS-P-littoralis_Contig661:154608..154671 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig661 154609..154671 + |
| 1680791381.8907754-CDS-P-littoralis_Contig661:161997..162243 | 1680791381.8907754-CDS-P-littoralis_Contig661:161997..162243 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig661 161998..162243 + |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig661.95.1 >prot_P-littoralis_Contig661.95.1 ID=prot_P-littoralis_Contig661.95.1|Name=mRNA_P-littoralis_Contig661.95.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=103bp
MYREAVPVDLTAKQLSQILSAINSYGQIGEFDSNGEHVLRMDIQRCGGKV
HVGFMPSDRRTRGAPRRDNLCASRMTRARLVVLGALSLLDPTLTWVGSSG
SG* back to topmRNA from alignment at P-littoralis_Contig661:154589..162295+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_P-littoralis_Contig661.95.1 ID=mRNA_P-littoralis_Contig661.95.1|Name=mRNA_P-littoralis_Contig661.95.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=7707bp|location=Sequence derived from alignment at P-littoralis_Contig661:154589..162295+ (Pylaiella littoralis U1_48)
AGTGGTTCGCCGCCTCGTCCATGTACCGCGAAGCGGTTCCGGTGGACTTG
ACGGCTAAGCAGCTGAGCCAGATACTTTCTGCGGTGGGTGAACACACCGT
CTCGAATTAGAGGCTTATTGTTTATACGCTGTGCACCGTAGGTATTGTCT
CGACATATTGTATCTCAGGTCTTCGCGCCTTTTGGGATCGACCTCGGTGT
ACTCGCGGGTAGGACCCATAGATGCCTTGGGGGAACCCGCAGGATATAAC
AATTGGTTTCACCTTTCTATTATCATACTTAGATCCCGTGATATTTGTTG
TGGGAAATCCTAGTATACACGCTTAAAGTGGGCTCCCGACACTTTGCGTT
TCAGTGTATCGGCGTTATGTACATCCTGGTCCTCGGTTGCGTTGTAGCGT
GTATGGTATGAGGTAGTCATGGCATCCATTCCTCCCAGATCTGACATACA
TACATACCTCGCGTGCGCTCCGATATATCAATGGCCCGGCACACAGAAAG
CCGTAAAGAAAAAGTACGGGGTCGAGGTAGACAAGAAGGGAAGGGTCCAG
GAGTACTCCATTCTTTCCTGTACATGGGGGAGTTGGATGGAGACGCTCGT
CGCCCTGCCCGCGGACTGGTCCATCCAGCGTCGTGCCTCCGGCTCCTTGG
TCTGTTCCTCGGACGCGAAAGGGGCGAACGTCCGGGTAAGCTGAGGCTGC
TGCTGTTGGGGTAGAGCGCCAAGTAGCCTTGGTCAAGGCCAGATGAAGCA
AGGTACCTAGAAAATTTGTTGAGCGTGCGACATGGCAGCAGTTGGACGTC
TGTTACATTTCTTGATTTTTCTGGTTTGTTTCTTCGCTTCATTTTCCCTC
CCGAAATCCACCCCGTGCAGGTCACCCTGAAAGAGCCAGACTTGACCGGT
GGGAGCGATGTTGCGTCCATCACGATGAACGGCTGCGACTTCAAAGAACA
CGACGCTCTCCTACGCTTTGCCCGTGTCCGTTCCGCGGGGGATTTCGCGC
AGGTTAGCAAGAAAGCCCATGGCCGAGTTGACATTACATCTCTAGGTTGG
ATGGACTGTACCTACCTTGGGAAACACACCGTATGTAGGCCGTAGGCGTT
CGAGTCCCAACACTCATACTTTTTTTTTCTCTTGGCGTGCGTCCGTTGAT
ACGCGTCTTCCTTCCTTCTCGTTTCTCTTTGTAGCTTCTGGGCGCTGTCG
GATGCTTCAGCCCTTGCCAGGGCGTTCGCCGCCAGCACCTTGTGGAGGAT
CTGTCGTTGACCCCCAACACGGCGGACGGGTTTAGCCGATTAGTGCGTAT
GGCCCAGCGCACTCTCGAGCAGAAGCCCCACCTCTCGTCCGATGTCGGTC
GCTGGGATGGTGTGGCGTCTATTTCGGGGTGTATCGCAGGGAGTCGGGGT
GTTTCGGGCGTGTTGGGTCGGGTGGGAGACGTTGACGTACTATGGCACAA
AGGCTGCACTCGATTGGCTGGCCAAGGCCATGGTGTTGAGTCGGTACCAA
GGTGTGCTGCGTGCAAGAAGTTCTACCGCAAGGGAGTCTCGAAGCGGGCC
CACAATGTATCGACGAAGGACGTGTCAGTCGGCACGAACGTCGGCTACAT
GGGCACCGCGCAAAAGTTTAGTGGCGCCGACTGACTGGTGTGTGGCGTGG
AGCGTTGGGGACAACACTTAGGGTTGTGATAGTTATTGCTCTCAAGAAGA
TGCCGTGCACCCGTTGTCTTTATTGGGGCCTGTCACTGACCGGCCTGCTC
TACGTATCCCCTCAATGGCAGGATCGCACCATCTTCATCAACGGCCAAAA
GATCAAGAAGGAGCGAGAAGCGAAGATCCGCGCGGTGGAGCGACTTAAAG
CTGCGAGGAGGGAGTTCGTGCGGATCAGCGACAAGCAGGGGGAAGCTCTC
CACACCTTCCTCTCCGACCCCGAGACGCAGGCGATCTTCGACAAGAAGTG
TCCGCCGGGGACCCACCAGCGAGCGTTGTATGAGGTATGTTTTTTTCCCA
GCCGTCGCGCACTGAAAAATAGTTTTTTTAGTTGAGTTGTTTTACGTTTT
CCATGGTATTGTTTAAGGCAGCGCATGAGCCGTGATTATAATTTGGCCGT
GTTCGGCGTGCGCTATCGCATCTAACTGGAAGCTTTTCTTCGTGTGGTCG
ACCCTACTGTCGTAACTCCCGATATATGACAGGATCAGAAGAGGTGGAAC
GAAACCAACGGGAAAGTACGAGGGTATCGGTTCCACCCTGCTACACTGCG
AATCGCTGTCTATCTGCAAGGCGTGGCTGGTTCCGCGGCGTACAACATCC
TGAGTACGATGCTGCACCTCCCAACCACGAGGCGCATCCAGCAGATCCGG
GCCAAGACCGCGGGCCCGAGGACGGGTGTCTTGGTGGAGAACATCAAGGT
ACGCTTTCCCATTTGTGTGTCTTCTCGCCTAGAGTGTGGAATGGCGTTTA
TTGTTATAAGGGCATGTATACGCCCCCCCCCCCTTTAGTTGAAAGGTTGT
TGTGTCTATGTAAATATAGTGTGGAATGTCCTGTGATGTGCGCACTCGAG
GTACACTTCTCCGCCGTTGTATTTTTTTTTTCCGCCTCGAATGGAACGGA
CCTTCACGTACGTCTCTATGTACCTCGCTCCCCTCCTTCTGTGTAATTCT
TGTTGTTCTTTTGCCTGGAGTGTGCAATGTCCTGTGATGTACTCGTACTC
GAGGTACACTTTTCCGCCGGTGTTGATTTTTTTTTTTTTCGCCTCGAATG
GAACAGAATTCCATGTATGCTACCCCGCCCCCACGTTCTTCAGTGTATTA
TTTTTGTTGTGTTTTGTCTAGAGTGTGGAATGTCCTGTGATGTGCTGGTA
CTCCAGGTACGCTCTCCCAACCGTCGTTTGTTTCAACAGAAAGATGGTAT
TCTCGCGGCTATGCAAGATGCGTCCGCGGCGGATCTGACGGGTGTGTTGG
CGTGGGACCTGATGCATCTGAACAAGAACGGGTTCACGTTTGCGCCGAAC
GCGGGCGGCATTTCGGGGCTCGTGGACGAGACGACCTTTTTCAACCCCGT
CTACGAGGAGCGCGGAGACGAAGGTATGGGTCTTGAGAACACTCTCGAGC
GGGTGGTCGCTTCCCAGTATGTCGAGGTAATTGTTGTATGTTCCCAGGCT
CCCCGCATCACAGGCTTCTTTGCTGTCGACCGGGCTCTATATAGCGTTGG
ACGTGACATCTTCTATGTTTTGCCTCCAACAAGAGTATTATAACCGTCAA
TCCTGACACACCGCCTTCCTGCATGCCCCCGACTCATCTTTCGTCGCCTG
CAGATGTTCTTCGTCAGTGTCGGCAAGCCAGAGTACAAGTTTGTCGTCTG
GCGCGACGCTGTGAAGGGGCTCAGCACGGACTACATTCAGCGCATGGTGG
TGAGGGTCATGCGTTTCCTCGCGGCCGCCCACCAGGACAAGGCGTTTGAC
GTCATCGCCACCGTTTGCGACGGCGCATCTGAGCAGTGAGTGGTCGCGTC
CGTGTCTAGATAAAACGCCAAATACTGTAACGTAGTGCCCTGAGGACATC
CACCTCAGACAATATGCCCCCTCTCGTGAAACGCCCCCCCCCCACTCGCC
AGAAAAAGGCTGGCGCGCCGCATAATTTGGAGGCTTCTAAATATTACACC
GTGTCGCGCCCCCGCCCTCCTCTTCCTCCCTTGGCATGCACAGGACATCC
TCGAGCACCGTTTTGCTCACATCCGCGCGGGCCTGGGAACACACAACGCT
CCCACTGCGGCCCAGGCCATGCAACGTTCTGCGTTGGGCGACCAGATCAG
AGCTCTTCACGGCTCTTCCCGCATGAACTCCAGCCTCAATGCCCGAAAGG
GGGCTGACTTTAATGTCAGCGACTACAGGGGCAAAATCATGTTGGCCGTG
AGCAAGGCAGAGCGCGCCACTTACGTCAGGGCGCGGTCTTGGAACAAGTA
CGAGGCAATTTTATCCCCGCGGTACTTGGAGTAAACTAGGTCTCAACGCA
GGATCGTATGGCGGTGCCGGTAGCGTCGCTCCCTGCAGCCCTGGTTGGCT
GAACTATGTAGACGAGGAGTTAGCTACAGAGTCGGGTCTTGGTTGCCACT
GCTGTAGTTTATTTGGAATGGGGTACATGTACAGATTTGATCTCTCTGCC
GTAGTCTTTACTCAAGGTCACTAAGATGTCGTATATTTCCTGTGTCACGG
TTGTTTCTTACGTAGTAGGTGGACTACCTATACGAGCTTTGGCTGGTTGG
AAACTGTGACGATTTCGGGCCCGTAATATACGCCTGCACCCGTGTTCTTC
CCTGAGAACTGTTTGGTGGCGAGCTCAACGTGCTTTTTGCGGTGGTTGGG
AACAATTTTTTTGTTGTTTTGTTTTATTCTCCCATTGTTGGACTCTGTCG
TCTGCCCCTCTTGCCCCCATCCTCCACTTCTGCTAGCTAGACGACCCAAC
CGGGGTCACATAGGAGGGGGGGGCTGGACCCCCTCCTGCGGTACCTGCCT
TTGAGGTTTTTATCGCGAGCAGGGTTCGGCACTCCACAAGAGAGGCAGGT
TACACCCGACATTGTGCGGGTTCCTGGTACTGGATAAAATAGGGGTTTTC
ACCGTCCGGGTCGGTGATGATTGCTTCACACCATTTTGTAATTACCCGGC
GTAAGTTGTTAGGTTATTGTAGGGGGGGGGGTAAAGTGCTATAGAGCGTT
CATGTTCTAATAGGACGTGAAAACTTTGCTGATCGTTGGTATAGTTTACT
GGTCCGTTGGGGGCATTCAATGTTTCAGTGTTCCTCGTTTCCATATGTTA
GTGTTTCAGTGTTCCTTGTTTCCATATGTTGACGAAATTGAGCGCGGAAT
TTCGACGGAACCCGCACGGGAAAAGTATGATAAGCTTTTTTCATCGGCGG
AGGAAACTTCAAGAAAAAAGTCCTGTGTTGAGGAAGCACAACACACACGT
GCGCACTTCTCGGGGAGGGGCCGTCCCGGGAATGCGCGCCTCCAACTTGT
GCCTTCATGCCACGCGATGTTTGATGGACACACCCGATGTGTCCACTCGC
TTCGTGCGCCAGTGATGTAAAAAAATAAACACAAAACGTATATATATAAA
TGTCCGCGTCCGGAGGTACTTTGTTTGAATCAACACTAGTTTTACCGAGG
ATGAACACATCAAACGTTCCCACTCCCGTCGGCATCGCAAAGAACTATAC
ATACGCAAGAGTAGTTTCACAAGAAAAAACATTACTCATGCGCAACGCTG
CCCGCACACACTTGGATTCAGCCCGTTTGTTTTCCTGCCAATCCTGCGTA
GCTCTCAGCCCTTGCTTTCCTCCACACCGCCGTCGGAATCCACGTCCAGA
TCATCGGGAAGGAACAAAGCAAATCTCTCAAACTCGTCGTCCGAGTCACC
CCCTTCATGCCAAAGTGCATCCGGGACATCTTGATTCAAGAAGGCATCAT
CGAATTGAGAGTGCGCCTGTACGCCTTCCACCTCAATCTCCTTCTCGCTC
GCGGTTTGAATGGCCAGATTTTCTACAGCACGCAACCACTCCGCGTTCTC
CCGCTCCAACGCCTCACTCTCGTGATCGATCTCGAAATCATCCGGATGCG
GCATGTTCATGCTCTCACCCCCTTCTCCCCCAACTTCTGCAACGCCCCCC
GCACCCCCCGCTCCCGTCGAATCTTGGTCTACGCCCCCACTCGTCGCGGA
CACCCCCCCGTCCGCGTACATAACAGCCATTTTATCCATCAACTTGACAA
CCAAGTGCTGCTTGAGCTTCCATTGATTAGCTACCGCCCCCGCCTTCACG
CAAAGTTCGGCGAGCCAAGTTTTTTTTAAAAGCTCCAACTCTACCTCCCC
CATCCCTTTCACCTCTTCGAGAGTTGCAGGTTTCTGAGATTTCTTCTTAG
CCCCTTTGCCCGACCCCCGACCCGAGCGAGACTGCCCTCCAGCATCAGCA
GCCCCCCCCTCAGTACCGCTCGCAGCACCCCCCCCCGTGCCGCTCCCAGC
CTTCTTGCTGCCAGCCTTGAGCCCTGTCCGCAGAGCGAGCTGCGTTGCCT
TGCCTTTGCCGAGAGTGGACGAGACCTCCGACATTCGAATAGTATACTCG
TACATACGCAGGTTGTGAAACCTACCCAACAAGAACAACCTCACCACTTC
GAGAACCTTGATGTTAGGCGCAAATCCTGCGTTTCCTGCTGCGAAATCGC
AACACGCAGTCCATGCTTTTTTTACCACCGTTGACTCGGTAACGAGAGTC
AGCAATCTATCGGACAAGTTTCCTAGGTGTGCCGCCAGGAAAACCGGATG
CTCGAACACGTGGGCATACGCACTCTCCACCGTAAGGAGAAAGTCGTAAA
ATCGATGCGAAACAAAAAGGAGACCCGCCCCGTTCACAGGGTCGTTCCTC
GCCTCAACCAGGTCAGTCATGCCCTTCAGTTCGGGGTCCAACTCTAGGGC
GGCTGCAGCAGACTTGGAATGATTTCTCATCACGAACCACATCCACTCTC
CCTGCGGGATACCATTTCTGAACTGGTACTGCCACACCTTGCTCACGAGC
CACCCGCCTATGTAATACAAGACTCTCGACCTCACTGGGGAAAGCGTAGC
TACCTTGCTCGGGTAGGTGAGGTGGATCATGTTGGCCTCTTTCCTAGACC
GCACAAACACCCCGTACAGCTCCTGCATCAAAAACCGCGGCGAGGGCGAG
CACGCGATCGAGGTACGGGGGGAGGCGGGGGTCGAGGTGAGGGCTCTGCG
ATAAACGAAAATTTCAAGATGTACGTAGGGCACCGCGGGGAGCACGGGGC
GGTGCGTGGCAGGCGAAGCGAAGAGGCATCCTACAGACATGTATCCCAGG
ATGTCATACGAACAACCGCCCAGCAAAACGGATGGAATCGCAACCTACTG
CTCGACGAAGGCAACTCTCTTCTTCTAACGCACCTCGTCTACGAAATTGA
GGATGTTACAAAGGTAGTGCAGGCCTTGAATCCTGATCGTCCCATACACC
AGACGTTGCACTTCTTCGTGGCCCATCCAGGTCTTCAGCCGCCCTGGCCA
CTCTCTCATACGCGCCAAGGTGAACGTTGCCGCCGTCTTGGTGGTCGGCT
TCTTTTCGTGACCGGCAAGGAGGAGCTCCACCAGATGATCCCACGAGCCA
AGTATCATGTCACGCGTGGGGGCAAGTCCCTCCACCTTGTGCCACAGGGG
CAGCAGCCACGGCTGGTGCTCCAGAAAGAGGGCCTTCACCTTTCCCCGCA
CCTCGACGACGACTTCATCTCGGCGCTCGCGGAGGGTCTCGATGGACGTG
TGCAGCATTGCCGTTGCTGCCGCTGCCTTCGCTGCTGCCTTCGCTGCTTC
CGCTTTCTCTGCTGCCGTTTCTGCCGTTGCTTCCGTCGCTGCCCCCGTTG
CCTGTCCAGATCAACAGTTACGGACAAATAGGGGAGTTTGACAGCAACGG
AGAGCACGTACTTAGAATGGACATCCAGCGGTGCGGAGGCAAGGTTCATG
TCGGTTTCATGCCTTCAGATAGGCGCACACGGGGGGCACCGCGGCGTGAC
AATTTATGTGCATCCCGTATGACAAGAGCTAGACTAGTAGTGCTCGGGGC
GCTTTCGCTGCTTGACCCTACCCTCACATGGGTGGGTAGTTCTGGCTCGG
GGTGATCCCCCGCCAGTTAACAAGGTACATCTTCCACCTTTGACACAGAG
AGAGGGG back to topCoding sequence (CDS) from alignment at P-littoralis_Contig661:154589..162295+ >mRNA_P-littoralis_Contig661.95.1 ID=mRNA_P-littoralis_Contig661.95.1|Name=mRNA_P-littoralis_Contig661.95.1|organism=Pylaiella littoralis U1_48|type=CDS|length=309bp|location=Sequence derived from alignment at P-littoralis_Contig661:154589..162295+ (Pylaiella littoralis U1_48)
ATGTACCGCGAAGCGGTTCCGGTGGACTTGACGGCTAAGCAGCTGAGCCA
GATACTTTCTGCGATCAACAGTTACGGACAAATAGGGGAGTTTGACAGCA
ACGGAGAGCACGTACTTAGAATGGACATCCAGCGGTGCGGAGGCAAGGTT
CATGTCGGTTTCATGCCTTCAGATAGGCGCACACGGGGGGCACCGCGGCG
TGACAATTTATGTGCATCCCGTATGACAAGAGCTAGACTAGTAGTGCTCG
GGGCGCTTTCGCTGCTTGACCCTACCCTCACATGGGTGGGTAGTTCTGGC
TCGGGGTGA back to top
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