mRNA_P-littoralis_Contig661.73.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig661.73.1 vs. uniprot
Match: A0A6H5JUK3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUK3_9PHAE) HSP 1 Score: 404 bits (1037), Expect = 9.220e-135 Identity = 206/295 (69.83%), Postives = 229/295 (77.63%), Query Frame = 1
Query: 475 HIMRSCRSRRCSACLQWGEDFRHTRARTGELVRTFVDEAGIADRFPGFQSIAAGTNLLALCKQSGCLLELYKKHESARSRERVARKASQTPRHSRRWSAAPEPVTHDKRRRLDRYCTSPEAVDALRDAVAISGCVLDMCGGPEDAVAQRFGGTCEVLTNDVSSRLSPDTNLDASVLYFRDDFLKANSGK---------PQTGSSRALRTRVLWGLSRRRWR*RRKARR*NCRYRS*NPVRGGWLAETSPAVCVFLRRAKYTHAHHVKVGEFWGVWYIDGGSCDNSRGSRLVFCPE 1332
+IM S RS RCSACL+WG+DFRHTRARTGELVR+FVDEAGIAD+FPGFQSIAAGTNLLALCK++GCLLELY+K E ARSRERVARKA Q PRHSR WSAAPEPVTHDKRRRLDRYCT PEAV+ L++AVAI+GCVLDMCGGPEDAVAQ F TCEVLTNDVSSRLS TNLDAS+L FRD+F KAN GK P G+ ++ + + A + + RGGWL + PAVC+FLRRAKYTHAHHVKVGEFWGVWY DGG C S GSRLVFCPE
Sbjct: 15 YIMPSSRSGRCSACLEWGQDFRHTRARTGELVRSFVDEAGIADKFPGFQSIAAGTNLLALCKRAGCLLELYQKQEWARSRERVARKAKQMPRHSRMWSAAPEPVTHDKRRRLDRYCTLPEAVEVLQNAVAIAGCVLDMCGGPEDAVAQGFRSTCEVLTNDVSSRLSAGTNLDASLLSFRDNFRKANPGKQPDWVVTSPPYKGAVGFVKAALAVAT-------KGVALKLPLSFLEPCADRGGWLVDNPPAVCIFLRRAKYTHAHHVKVGEFWGVWYTDGGCCGKSGGSRLVFCPE 302
BLAST of mRNA_P-littoralis_Contig661.73.1 vs. uniprot
Match: A0A6H5KTR5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KTR5_9PHAE) HSP 1 Score: 285 bits (730), Expect = 2.340e-90 Identity = 142/165 (86.06%), Postives = 150/165 (90.91%), Query Frame = 1
Query: 472 LHIMRSCRSRRCSACLQWGEDFRHTRARTGELVRTFVDEAGIADRFPGFQSIAAGTNLLALCKQSGCLLELYKKHESARSRERVARKASQTPRHSRRWSAAPEPVTHDKRRRLDRYCTSPEAVDALRDAVAISGCVLDMCGGPEDAVAQRFGGTCEVLTNDVSSR 966
L IM+S SRRCSACL+ GEDFR TRARTGEL+R+FVDEAG+ADRFPGFQS AAG NL ALCK+SGCLLELYKKHE ARSRERVARKA QTPRHSR WSAAPEPVTH KRRR DRYCTSPEAVDALRDAVAI+GCVLDMCGGP+DAVA FGGTCEVLTNDVSSR
Sbjct: 21 LQIMQSSSSRRCSACLECGEDFRQTRARTGELLRSFVDEAGLADRFPGFQSGAAGPNLFALCKRSGCLLELYKKHEWARSRERVARKAKQTPRHSRTWSAAPEPVTHHKRRRFDRYCTSPEAVDALRDAVAITGCVLDMCGGPDDAVAMGFGGTCEVLTNDVSSR 185
BLAST of mRNA_P-littoralis_Contig661.73.1 vs. uniprot
Match: A0A6H5KJ32_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJ32_9PHAE) HSP 1 Score: 249 bits (635), Expect = 8.530e-76 Identity = 136/215 (63.26%), Postives = 154/215 (71.63%), Query Frame = 1
Query: 253 VETTQMLLGAPYEKKSSQKSVCGTCDSDIDIRSPYLAAWFTEALSTTSFLMLGARTGTKRYRS*DKVIAYTRVLHIMRSCRSRRCSACLQWGEDFRHTRARTGELVRTFVDEAGIADRFPGFQSIAAGTNLLALCKQSGCLLELYKKHESARSRERVARKASQTPRHSRRWSAAPEPVTHDKRRRLDRYCTSPEAVDALRDAVAISGCVLDMCGG 897
V+ +L APYE KS QKS G + + P L A R + R K + +IM S RS RCSACL+WG+D RHTRARTGELVR+FVDEAGIAD+FPGFQSIAAGTNLLALCK++GCLLELY+K E ARSRERVARKA Q PRHSR WSAAPEPVTHDKRRRLDRYCT PEAV+ L++AVAI+GCVLDMCGG
Sbjct: 11 VKRAHVLHEAPYENKSVQKSKQGG-SREASLNHPVLHAQ--------------GRYRGEALRDPGKQLRLHLFQYIMPSSRSGRCSACLEWGQDIRHTRARTGELVRSFVDEAGIADKFPGFQSIAAGTNLLALCKRAGCLLELYQKQEWARSRERVARKAKQMPRHSRMWSAAPEPVTHDKRRRLDRYCTLPEAVEVLQNAVAIAGCVLDMCGG 210
BLAST of mRNA_P-littoralis_Contig661.73.1 vs. uniprot
Match: A0A6H5KZK3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZK3_9PHAE) HSP 1 Score: 225 bits (574), Expect = 1.070e-67 Identity = 114/136 (83.82%), Postives = 120/136 (88.24%), Query Frame = 1
Query: 634 GTNLLALCKQSGCLLELYKKHESARSRERVARKASQTPRHSRRWSAAPEPVTHDKRRRLDRYCTSPEAVDALRDAVAISGCVLDMCGGPEDAVAQRFGGTCEVLTNDVSSRLSPDTNLDASVLYFRDDFLKANSGK 1041
G+NL+ALCK+SG LLELYKKHE ARSRERVA KA QTPRHSR WSAAPEPVTHDKRRRLDRYCTSP AVDALRDAV I GCVLDMCGGPE AVA FGGTCEVLTNDV SRLSPD+NLDAS+L F DFLKA+ GK
Sbjct: 2 GSNLVALCKRSGYLLELYKKHERARSRERVAWKAEQTPRHSRTWSAAPEPVTHDKRRRLDRYCTSPGAVDALRDAVDIMGCVLDMCGGPEAAVALGFGGTCEVLTNDVGSRLSPDSNLDASLLSFPSDFLKAHPGK 137
BLAST of mRNA_P-littoralis_Contig661.73.1 vs. uniprot
Match: A0A6H5JUT6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUT6_9PHAE) HSP 1 Score: 221 bits (562), Expect = 2.160e-65 Identity = 111/134 (82.84%), Postives = 120/134 (89.55%), Query Frame = 1
Query: 601 DRFPGFQSIAAGTNLLALCKQSGCLLELYKKHESARSRERVARKASQTPRHSRRWSAAPEPVTHDKRRRLDRYCTSPEAVDALRDAVAISGCVLDMCGGPEDAVAQRFGGTCEVLTNDVSSRLSPDTNLDASVL 1002
D+FPGFQSIAA TNLLALCK++GCLLELY+K E ARSRERVARKA Q PRHSR WSAAPEPVTHDK RRLDRYCT PEAV+ L++AVAI+GCVLDMCGGPEDAVAQ F TCEVLTNDVSSRLS TNLDAS+L
Sbjct: 23 DKFPGFQSIAARTNLLALCKRAGCLLELYQKQEWARSRERVARKAKQMPRHSRMWSAAPEPVTHDKCRRLDRYCTLPEAVEVLQNAVAIAGCVLDMCGGPEDAVAQGFRSTCEVLTNDVSSRLSAGTNLDASLL 156
BLAST of mRNA_P-littoralis_Contig661.73.1 vs. uniprot
Match: A0A6H5KHQ4_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KHQ4_9PHAE) HSP 1 Score: 207 bits (528), Expect = 7.210e-59 Identity = 124/299 (41.47%), Postives = 167/299 (55.85%), Query Frame = 1
Query: 487 SCRSRRCSACLQWGE--DFRHTRARTGELVRTFVDEAGIADRFPGFQSIAAGTNLLALCKQSGCLLELYKKHESARSRERVARKASQTPRHSRRWSAAPEPVTHDKRRRLDRYCTSPEAVDALRDAVAISGCVLDMCGGPEDAVAQRFGGTCEVLTNDVSSRLS------PDTNLDASVLYFRDDFL---------KANSGKPQTGSSRALRTRVL---WGLSRRRWR*RRKARR*NCRYRS*NPVRGGWLAETSPAVCVFLRRAKYTHAHHVKVGEFWGVWYIDGGSCDNSRGSRLVF 1323
S S C ACL+ + +R R RT ++R FV AG+A++FPG + G + L CK++ C+L+ KH S +R +K + + W++APEP H KRR LDRYCTS AV+AL DAV +SG VLDMCGGP+DAVA++ TCEV+TNDVSSRLS PDT+LDAS F +FL + + P G+ + ++ + G++ +R + + R WL P VCVFLRRA YT HV +GEFWGVWY GG G++LVF
Sbjct: 7 SSTSETCDACLREDDAAGYRQLRPRTMSMLRAFVRNAGLAEKFPGVMPLGVGIDSLVRCKRAECVLKQNDKHMSDFCHDRARKKQKRNRSEAATWTSAPEPAVHVKRRHLDRYCTSIVAVEALLDAVNVSGRVLDMCGGPDDAVARKLRDTCEVVTNDVSSRLSSDARRAPDTSLDASKSTFAAEFLADGFQQQPERVVASPPYKGAVKFVKAALCVAKHGVALKR----------SLSFLEPCVDRADWLEANPPTVCVFLRRASYT-PEHVMMGEFWGVWYCTGGDRTAVGGTKLVF 294
BLAST of mRNA_P-littoralis_Contig661.73.1 vs. uniprot
Match: A0A6H5KD58_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KD58_9PHAE) HSP 1 Score: 202 bits (513), Expect = 1.410e-57 Identity = 106/169 (62.72%), Postives = 122/169 (72.19%), Query Frame = 1
Query: 547 RARTGELVRTFVDEAGIADRFPGFQSIAAGTNLLALCKQSGCLLELYKKHESA----RSRERVARKASQTPRHSRRWSAAPEPVTHDKRRRLDRYCTSPEAVDALRDAVAISGCVLDMCGGPEDAVAQRFGGTCEVLTNDVSSRLSPDTNLDASVLYFRDDFLKANSGK 1041
R RT VR FVDE GIA++FP G + L LCK+SGCLL+LYKKHE RS++R ARKA+QTPRH+ PEP TH KRR LDRYCTSPEAV+AL AV+I+GC+LD+CGGP DAVA R G TCEVLTNDVSS DTNLDAS+ F DDF A+SGK
Sbjct: 2 RPRTSSQVRAFVDEIGIANQFPALDEGGLGASTLTLCKRSGCLLQLYKKHEQRMSKERSKDRRARKAAQTPRHATGMWTVPEPQTHLKRRWLDRYCTSPEAVEALLGAVSITGCILDVCGGPTDAVATRLGPTCEVLTNDVSSGRPADTNLDASLESFPDDFFAASSGK 170
BLAST of mRNA_P-littoralis_Contig661.73.1 vs. uniprot
Match: A0A6H5KNW7_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNW7_9PHAE) HSP 1 Score: 192 bits (488), Expect = 1.180e-54 Identity = 103/172 (59.88%), Postives = 117/172 (68.02%), Query Frame = 1
Query: 478 IMRSCRSRRCSACLQWGED--FRHTRARTGELVRTFVDEAGIADRFPGFQSIAAGTNLLALCKQSGCLLELYKKHESA----RSRERVARKASQTPRHSRRWSAAPEPVTHDKRRRLDRYCTSPEAVDALRDAVAISGCVLDMCGGPEDAVAQRFGGTCEVLTNDVSSRLSP 975
I S RC+ACL GE+ FRH RART VR FVDE GIA++F G L LC++ CLL+LYKKHE RS++R ARKA++TPRH++ W APEP TH KRR LDRYCTSPEAVDAL AV I+GCVLDMCGGP DAVA R TCEVLTND SS P
Sbjct: 4 IPMSATGTRCTACLSGGEEPAFRHMRARTSSQVRDFVDEVGIANQFTALNEGNLGVITLVLCRRPACLLQLYKKHEQRASKDRSKDRRARKAARTPRHAKGWVGAPEPQTHLKRRWLDRYCTSPEAVDALLGAVGITGCVLDMCGGPTDAVATRLRSTCEVLTNDASSGYQP 175
BLAST of mRNA_P-littoralis_Contig661.73.1 vs. uniprot
Match: D7G0Y0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0Y0_ECTSI) HSP 1 Score: 186 bits (473), Expect = 4.110e-52 Identity = 112/208 (53.85%), Postives = 130/208 (62.50%), Query Frame = 1
Query: 733 ASQTPRHSRRWSAAPEPVTHDKRRRLDRYCTSPEAVDALRDAVAISGCVLDMCGGPEDAVAQRFGGTCEVLTNDVSSRLSPDTNLDASVLYFRDDFLKANSGK-PQTGS-----SRALRTRVLWGLSRRRWR*RRKARR*NCRYRS*NPVR--GGWLAETSPAVCVFLRRAKYTHAHHVKVGEFWGVWYIDGGSCDNSRGSRLVFCPE 1332
A++TPRH++ APEP TH +RR LDRYCTSPEA+DA AV I+GCVLDMCGGP DAVA R TCE+LTNDVSS DTNLDAS+ F +DFL A SGK P+ + SRAL T V +S K P GGWL P++CVFLRRAKYT A++ K EFWGVWY SC N +RLVFCPE
Sbjct: 2 AARTPRHAKGQRTAPEPQTHLRRRWLDRYCTSPEAMDASLGAVDITGCVLDMCGGPTDAVATRLRSTCEILTNDVSSGRPADTNLDASLESFPEDFLAAYSGKRPEWVATSPPYSRAL-TFVKAAMSLAT-----KGVTFKMHIFFLEPCADWGGWLQTNPPSLCVFLRRAKYTRANNAKTSEFWGVWYTQEMSCRNR--TRLVFCPE 201
BLAST of mRNA_P-littoralis_Contig661.73.1 vs. uniprot
Match: A0A6H5KES8_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KES8_9PHAE) HSP 1 Score: 182 bits (462), Expect = 1.490e-51 Identity = 91/103 (88.35%), Postives = 95/103 (92.23%), Query Frame = 1
Query: 544 TRARTGELVRTFVDEAGIADRFPGFQSIAAGTNLLALCKQSGCLLELYKKHESARSRERVARKASQTPRHSRRWSAAPEPVTHDKRRRLDRYCTSPEAVDALR 852
TRARTGEL+R+FVDEAG+ADRFPGFQS AAG NL ALCK+SGCLLELYKKHE ARSRERVARKA QTPRHSR WSAAPEPVTH KRRR DRYCTSPEAVDALR
Sbjct: 22 TRARTGELLRSFVDEAGLADRFPGFQSGAAGPNLFALCKRSGCLLELYKKHEWARSRERVARKAKQTPRHSRTWSAAPEPVTHHKRRRFDRYCTSPEAVDALR 124 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig661.73.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig661.73.1 >prot_P-littoralis_Contig661.73.1 ID=prot_P-littoralis_Contig661.73.1|Name=mRNA_P-littoralis_Contig661.73.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=211bp MRSCRSRRCSACLQWGEDFRHTRARTGELVRTFVDEAGIADRFPGFQSIAback to top mRNA from alignment at P-littoralis_Contig661:137189..139531- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig661.73.1 ID=mRNA_P-littoralis_Contig661.73.1|Name=mRNA_P-littoralis_Contig661.73.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=2343bp|location=Sequence derived from alignment at P-littoralis_Contig661:137189..139531- (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig661:137189..139531- >mRNA_P-littoralis_Contig661.73.1 ID=mRNA_P-littoralis_Contig661.73.1|Name=mRNA_P-littoralis_Contig661.73.1|organism=Pylaiella littoralis U1_48|type=CDS|length=633bp|location=Sequence derived from alignment at P-littoralis_Contig661:137189..139531- (Pylaiella littoralis U1_48)back to top |