mRNA_P-littoralis_Contig661.48.4 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig661.48.4
Unique NamemRNA_P-littoralis_Contig661.48.4
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
BLAST of mRNA_P-littoralis_Contig661.48.4 vs. uniprot
Match: D7FZI2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZI2_ECTSI)

HSP 1 Score: 355 bits (912), Expect = 2.080e-110
Identity = 189/406 (46.55%), Postives = 261/406 (64.29%), Query Frame = 1
Query:    1 VLHAVECVRPCEGVCRRHLVEDQTLDPECARHFGSVTRMAQRTLENSPDALVGD-DRWASANVRGFLKSPNGCVSGVLG-LRGHD----------DVLWSRRCRGVATNVDGSLGVARCSECKDFYRRSVTRRTIQAAKHTPDRSTRIGDMSTGQK---------ERTIHLINR------DRKKKAAEIARLREELHVARKDFVKFNKKQGEALHELFMDPKSKEVLCTKLPKDSAERAIYEDQVRWNSTHGAAKGFRFHPTTLRIAIYMHGMIGTSAYNLVSNLLHLPSIARVKQLRRQARPPQTGVLRDNIKKYGNLAAHHDADKADLTGILTWDLMHLNKHGFNYSPNAGGITGLIDETTFFHPVYNEKNHEGEDLEKTIGRIVANQYVEMFFVSLGNPEYKF 1137
            +L+ V    PC+GV ++H+ ED  +    A  F S+ R AQR LE++P    G+  RW +A V G L  P+G VSGVLG + GH            V W++ C GVAT   G   V RC  C+ F R ++  R   A+K    +S++   M+  QK         +R   + ++      D  ++    ARLRE +   RK+ V+   +QGEALH+  +D ++KEV+ ++LP+ S +R  YEDQV+WN++HG AKGFRFHP T+R+AIY+ G+ GT+AYN++ N+LHLPS  R+KQLRR A PP+TGVL +NI KYG LAA  DADK DL G+LTWDLMHLNK+GF+++PN GG TGL+DETTFF+P+Y  +    +++E  + +IVA QYVEMFFVS+G PEYKF
Sbjct:  205 LLNVVWYTLPCQGVSQQHVREDAKMPAGAADVFPSLVRQAQRNLESNPTLPFGERGRWQNAFVEGLLSGPSG-VSGVLGTVGGHSVPGHGGVGGHKVFWAKGCVGVATPFQGLNSVPRCQGCRGFVREALRPRLQNASKAESLKSSKNIYMTRAQKVDVTIVSAPQRVPRITSKLWSTAADLNRERTTTARLRERIVSMRKECVRVPVEQGEALHKFLVDAETKEVIHSRLPQGSDQRYFYEDQVKWNTSHGKAKGFRFHPATMRLAIYIQGIAGTAAYNMLRNVLHLPSPERIKQLRRNAAPPRTGVLTENILKYGKLAATQDADKVDLMGVLTWDLMHLNKNGFSFAPNGGGFTGLVDETTFFNPIYKHEGGVVKEVEPILEKIVATQYVEMFFVSIGKPEYKF 609          
BLAST of mRNA_P-littoralis_Contig661.48.4 vs. uniprot
Match: A0A6H5KVF4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KVF4_9PHAE)

HSP 1 Score: 353 bits (907), Expect = 2.670e-110
Identity = 193/402 (48.01%), Postives = 262/402 (65.17%), Query Frame = 1
Query:    1 VLHAVECVRPCEGVCRRHLVEDQTLDPECARHFGSVTRMAQRTLENSPDALVGD-DRWASANVRGFLKSPNGCVSGVLG-LRGHD----------DVLWSRRCRGVATNVDGSLGVARCSECKDFYRRSVTRRTIQAAKHTPDRSTRIGDMSTGQK-ERTIHLI-NRDRK--KKAAEI-------ARLREELHVARKDFVKFNKKQGEALHELFMDPKSKEVLCTKLPKDSAERAIYEDQVRWNSTHGAAKGFRFHPTTLRIAIYMHGMIGTSAYNLVSNLLHLPSIARVKQLRRQARPPQTGVLRDNIKKYGNLAAHHDADKADLTGILTWDLMHLNKHGFNYSPNAGGITGLIDETTFFHPVYNEKNHEGEDLEKTIGRIVANQYVEMFFVSLGNPEYKF 1137
            +L+ V    PC+GV ++H+ ED  +    A  F S+ R AQR LE++P    G+  RW +A V G L  P+G VSGVLG + GH            V W++ C GVAT   G   V RC  C+ F R ++  R   A+K    +S++   M++ QK + TI L   RD K    AA +        RLRE +   RK+ V+   +QGEALH+  +D ++KEV+ ++LP+ S +R  YEDQV+WN++HG AKGFRFHP T+R+AIY+ G+ GT+AYN++ N+LHLPS  R+KQLRR A PP+T VL +NI KYG LAA  DADK DL G+LTWDLMHLNK+GF+++PN GG TGL+DET FF+P+Y  +    +++E T+ +IVA QYVEMFFVS+G PEYKF
Sbjct:  300 LLNVVWHTLPCQGVSQQHVREDAKMPAGAADVFPSLVRQAQRNLESNPTLPFGERGRWQNAFVEGLLSGPSG-VSGVLGTVGGHSVPGHGGVGGHKVFWAKGCVGVATPFQGLNSVPRCQGCRGFVREALRPRLENASKAESLKSSKNIYMTSAQKVDETIVLAPQRDHKLWSTAASLNRERNATVRLRERIVSMRKECVRVPVEQGEALHKFLVDAETKEVIHSRLPQGSDQRYFYEDQVKWNTSHGKAKGFRFHPATMRLAIYIQGIAGTAAYNMLRNVLHLPSPERIKQLRRNAAPPRTCVLTENILKYGKLAATQDADKVDLMGVLTWDLMHLNKNGFSFAPNGGGFTGLVDETAFFNPIYKHEGGVVKEVEPTLEKIVATQYVEMFFVSIGKPEYKF 700          
BLAST of mRNA_P-littoralis_Contig661.48.4 vs. uniprot
Match: D7G2I2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2I2_ECTSI)

HSP 1 Score: 329 bits (843), Expect = 5.060e-105
Identity = 171/371 (46.09%), Postives = 240/371 (64.69%), Query Frame = 1
Query:    1 VLHAVECVRPCEGVCRRHLVEDQTLDPECARHFGSVTRMAQRTLENSPDALVGD-DRWASANVRGFLKSPNGCVSGVLG------LRGHDDV-----LWSRRCRGVATNVDGSLGVARCSECKDFYRRSVTRRTIQAAKHTPDRSTRIGDMSTGQKERTIHLINRDRKKKAAEIARLREELHVARKDFVKFNKKQGEALHELFMDPKSKEVLCTKLPKDSAERAIYEDQVRWNSTHGAAKGFRFHPTTLRIAIYMHGMIGTSAYNLVSNLLHLPSIARVKQLRRQARPPQTGVLRDNIKKYGNLAAHHDADKADLTGILTWDLMHLNKHGFNYSPNAGGITGLIDETTFFHPVYNEKNHEGEDLEKTIGRI 1077
            +L+ V    PC+GV ++H+ ED  +    A  F S+ R AQ  LE++P    G+  RW +A V G L  P+G VSGVLG      + GH  V      W++ C GVAT   G   V RC  C+DF R ++  R   A+K    +S++   M++ QK+  +     D  ++    ARLRE +   RK+ V+   +QGEALH+  +D ++KEV+ ++LP+ S +R  YEDQV+WN++HG AKGFRFHP T+R+AIY+ G+ GT+AYN++ N+LHLPS  R+KQLRR A PP+TGVL +NI KYG LAA  DADK DL G+LTWDLMHLNK GF+++PN GG TGL+DETTFF+P+Y  +     ++E T+ ++
Sbjct:  178 LLNVVWHTLPCQGVSQQHVREDANMPAGAADVFPSLVRQAQWNLESNPTLPFGERGRWQNAFVEGLLSGPSG-VSGVLGTVGAHSVPGHGGVGGHKVFWAKGCVGVATPFQGLNSVPRCQGCRDFVREALRPRLENASKAESLKSSKNLYMTSAQKDHKLWSTAADLNRERNATARLRERIVSMRKECVRVPVEQGEALHKFLVDAETKEVIHSRLPQGSDQRYFYEDQVKWNTSHGKAKGFRFHPATMRLAIYIQGIAGTAAYNMLMNVLHLPSPERIKQLRRNAAPPRTGVLTENILKYGKLAATQDADKVDLMGVLTWDLMHLNKSGFSFTPNGGGFTGLVDETTFFNPIYKHEGGVVREVEPTLEKL 547          
BLAST of mRNA_P-littoralis_Contig661.48.4 vs. uniprot
Match: D7G5R1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5R1_ECTSI)

HSP 1 Score: 275 bits (703), Expect = 1.110e-87
Identity = 130/216 (60.19%), Postives = 170/216 (78.70%), Query Frame = 1
Query:  490 RLREELHVARKDFVKFNKKQGEALHELFMDPKSKEVLCTKLPKDSAERAIYEDQVRWNSTHGAAKGFRFHPTTLRIAIYMHGMIGTSAYNLVSNLLHLPSIARVKQLRRQARPPQTGVLRDNIKKYGNLAAHHDADKADLTGILTWDLMHLNKHGFNYSPNAGGITGLIDETTFFHPVYNEKNHEGEDLEKTIGRIVANQYVEMFFVSLGNPEYKF 1137
            RL++ +  ARK+  + N +QG ALHEL +DP+S+ +   KLP+DSA+RAI+EDQ+RWN+   ++KGFRFHP TLRIAIYMHG+ G++ YN++ N +HLPS  RV+QL+ QA PP+TGVL DNI+KYG LAA  DADKADLTG+L+WDL HL+K+G +++P  G +TGL+DE TFF+PVY  K  E   L K +G+I+A QYVE FFVSLGNPEYKF
Sbjct:   12 RLQDRVLAARKESERINDQQGAALHELLLDPESRTIFEKKLPEDSAQRAIFEDQLRWNTRMASSKGFRFHPATLRIAIYMHGVAGSAGYNMLRNFIHLPSPRRVQQLQAQAAPPRTGVLVDNIRKYGRLAAEQDADKADLTGVLSWDLTHLSKNGLDFAPKEGRLTGLVDEATFFNPVYQGKVDEDGGLGKQLGKILATQYVE-FFVSLGNPEYKF 226          
BLAST of mRNA_P-littoralis_Contig661.48.4 vs. uniprot
Match: A0A6H5L5M0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L5M0_9PHAE)

HSP 1 Score: 235 bits (600), Expect = 3.330e-67
Identity = 103/165 (62.42%), Postives = 135/165 (81.82%), Query Frame = 1
Query:  643 EDQVRWNSTHGAAKGFRFHPTTLRIAIYMHGMIGTSAYNLVSNLLHLPSIARVKQLRRQARPPQTGVLRDNIKKYGNLAAHHDADKADLTGILTWDLMHLNKHGFNYSPNAGGITGLIDETTFFHPVYNEKNHEGEDLEKTIGRIVANQYVEMFFVSLGNPEYKF 1137
            +DQV+WN++HG AKGFRFHP T+R+AIY+ G+ GT+AYN+++N+LHLPS  R+KQLRR A PP+TGVL +NI K G LAA  D DKADL G+L WDLMHLNK+GF+++PN GG TGL+DETTFF+P+Y  +    +++E  + +IVA QYVEM+FVS+G PEYKF
Sbjct:  303 QDQVKWNTSHGKAKGFRFHPATMRLAIYIQGIAGTAAYNMLTNVLHLPSPERIKQLRRNAAPPRTGVLTENILKNGKLAATQDTDKADLMGVLAWDLMHLNKNGFSFAPNGGGFTGLVDETTFFNPIYKHEGGIVKEVEPILEKIVATQYVEMYFVSVGKPEYKF 467          
BLAST of mRNA_P-littoralis_Contig661.48.4 vs. uniprot
Match: D7FVM8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVM8_ECTSI)

HSP 1 Score: 209 bits (531), Expect = 2.550e-61
Identity = 126/318 (39.62%), Postives = 173/318 (54.40%), Query Frame = 1
Query:  157 GDD-RWASANVRGFLKSPNGCVSGVLGLRGHDDVLWSRRCRGVATNVDGSLGVARCSECKDFYRRSVTRRTIQAAKHTPDRSTRIGDMSTGQKERTIHLINRDRKKKAAEIARLREELHVARKDFVKFNKKQGEALHELFMDPKSKEVLCTKLPKDSAERAIYEDQVRWNSTHGAAKGFRFHPTTLRIAIYMHGMIGTSAYNLVSNLLHLPSIARVKQLRRQARPPQTGVLRDNIKKYGNLAAHHDADKADLTGILTWDLMHLNKHGFNYSPNAGGITGLIDETTFFHPVYNEKNHEGEDLEKTIGRIVANQYVEMFF 1107
            GD+ RW    V G L    G VSG+L       VLWS+ C  +A+N   S GVARC ECK+F+R+SV +   Q  K  P  +T+   +ST QK+     +  D +++ +   R    L             +G    E   D + + V  +  P D+A R  Y                            MHG+ G++ YN++ N +HLPS  RV++L  QA PP+TGVL DNI+KYG LAA  DADKADLTG+L+WDL HL+K+GF+++P  GG TGL+DE TFF+PVY  K  E  DL+K + +I+A +YVE  F
Sbjct:    4 GDEGRWERGAVAGCLAGTKG-VSGILVRVADKAVLWSKACGWLASNHGESGGVARCGECKEFFRKSVQKLLAQTVKSDPHSNTKTESLSTVQKKMHALAMEDDFREETSGGQRTTSNL-------------RGPTPME-HQDGEFERVSIS--PGDAANRHFY----------------------------MHGVAGSAGYNMLRNFIHLPSPRRVQRLEAQAAPPRTGVLVDNIRKYGRLAAEQDADKADLTGVLSWDLTHLSKNGFDFAPKEGGFTGLVDEATFFNPVYQRKVDEDGDLDKQLDKILATKYVERTF 276          
BLAST of mRNA_P-littoralis_Contig661.48.4 vs. uniprot
Match: A0A6H5KCN5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KCN5_9PHAE)

HSP 1 Score: 189 bits (480), Expect = 2.580e-55
Identity = 106/253 (41.90%), Postives = 126/253 (49.80%), Query Frame = 1
Query:   37 GVCRRHLVEDQTLDPECARHFGSVTRMAQRTLENSPDALVGDDR--WASANVRGFLKSPNGCVSGVLGLRGHDDVLWSRRCRGVATNVDGSLGVARCSECKDFYRRSVTRRTIQAAKHTPDRSTRIGDMSTGQKERTIHLINRDRKKKAAEIARLREELHVARKDFVKFNKKQGEALHELFMDPKSKEVLCTKLPKDSAERAIYEDQVRWNSTHGAAKGFRFHPTTLRIAIYMHGMIGTSAYNLVSNLLHLPS 789
            GVCR H+ ED+ +  E    FG+V R A R LE  P  L   DR  W  A+VRG L  PNG VSGV+GL G +DVLWSR+C G AT   G  GV RC+ CKDFYRR +T RT  AAKHTP + TR+ +MST QK                                                                       DQVRWN+  G  +GFR+HP TLRIA+Y+HGM GT+AYNLV   +HLPS
Sbjct:    6 GVCRSHMFEDKDVPLETVAAFGTVVRQALRILEKVPAILQPHDRDRWQHADVRGVLAGPNGHVSGVMGLVGREDVLWSRKCTGFATPSYGRTGVPRCTHCKDFYRRGMTPRTAHAAKHTPAKKTRVSEMSTAQK-----------------------------------------------------------------------DQVRWNTKEGKERGFRYHPQTLRIALYLHGMAGTAAYNLVRQYVHLPS 187          
BLAST of mRNA_P-littoralis_Contig661.48.4 vs. uniprot
Match: A0A6H5KQL9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQL9_9PHAE)

HSP 1 Score: 141 bits (355), Expect = 2.010e-36
Identity = 71/165 (43.03%), Postives = 105/165 (63.64%), Query Frame = 1
Query:  652 VRWNSTHGAAKGFRFHPTTLRIAIYMHGMIGTSAYNLVSNLLHLPSIARVKQLRRQARPPQT-GVLRDNIKKYGNLAAHHDADKADLTGILTWDLMHLNKHGFNYSPNAGGITGLIDETTFF-HPVYNEKN-HEGEDLEKTIGRIVANQYVEMFFVSLGNPEYKF 1137
            + +N   G++KG+RF P  LR A+Y    +G++ YN++ ++LHLPSI  ++++RR A    T GV    ++ YG +AA  +  + DL GIL WDLMHLN +GF   PN GGI GL+D  +   HP+   K   +   LE+T+   VA QY+E+F+VS+GN +YKF
Sbjct:    2 MNYNKFQGSSKGWRFSPKVLRWALYALANMGSAGYNVIQDVLHLPSIGHLRKVRRAAAGTTTWGVQHHLVEAYGKMAAEDNLGRFDLCGILVWDLMHLNTNGFKVRPNGGGIQGLVDPDSILRHPLDGVKGVADNISLEETLETFVATQYLEVFWVSIGNLKYKF 166          
BLAST of mRNA_P-littoralis_Contig661.48.4 vs. uniprot
Match: A0A6H5K7Z3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K7Z3_9PHAE)

HSP 1 Score: 146 bits (368), Expect = 5.310e-35
Identity = 80/203 (39.41%), Postives = 120/203 (59.11%), Query Frame = 1
Query:  547 QGEALHELFMDPKSKEVLCTKLPKDSAERAIYEDQVRWNSTHGAAKGFRFHPTTLRIAIYMHGMIGTSAYNLVSNLLHLPSIARVKQLRRQARPPQT-GVLRDNIKKYGNLAAHHDADKADLTGILTWDLMHLNKHGFNYSPNAGGITGLID-ETTFFHPVYNEKNHEGED----LEKTIGRIVANQYVEMFFVSLGNPEYKF 1137
            QG  LHE  +  +  E L   +P+DS ERA+ +  +  N   G  KG+R+ P  +R   Y    +G + Y L+ ++LHLPSI+ V + RR  R   T G+  D I+ +G +AA  +  + DL GIL WD MHLN +GF   PN GGI+GL+  ++  +HP+   +  +G D    LE T+   +A QY+E+++VS+GNP+YKF
Sbjct:   44 QGRRLHEA-LKTEDVEELFADIPEDSYERALVDHMMDRNEREGPKKGWRYSPKVVRWYCYALAKMGKAGYALIRDILHLPSISTVNRARRAGRGTATWGLQHDLIEAHGKMAAEENLGRFDLAGILCWDCMHLNTNGFTVRPNGGGISGLVSGDSVLYHPL---EAVQGVDKTISLEDTLETFMATQYLEVWWVSIGNPKYKF 242          
BLAST of mRNA_P-littoralis_Contig661.48.4 vs. uniprot
Match: A0A6H5KFP1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KFP1_9PHAE)

HSP 1 Score: 138 bits (348), Expect = 4.060e-32
Identity = 82/220 (37.27%), Postives = 121/220 (55.00%), Query Frame = 1
Query:  547 QGEALHE-LFMDPKSKEVLCTKLPKDSAERAIYEDQVRWNSTHGAAKGFRFHPTTLRIAIYMHGMIGTSAYNLVSNLLHLPSIARVKQLRRQARPPQTGVLRDNIKKYGNLAAHHDADKA--------------------DLTGILTWDLMHLNKHGFNYSPNAGGITGLIDETTFF-HPVYNEKN-HEGEDLEKTIGRIVANQYVEMFFVSLGNPEYKF 1137
            QG  LHE L  +P  K+V   +LP+ S  RA+ E+ +R+N   G+AKG+RF+   LR A Y    +G + Y ++ ++LHLP I  V+++   +   + G     I+ +  +A   +   +                    DL GIL WDLMHLN++ F   PN GGI GL+D  +FF HP+   +   E   LEKT+   VA QY+E+F+VS+GNP+YKF
Sbjct:  239 QGRRLHETLSGNPDVKDVFA-RLPEGSLARAVVEEMMRYNQHRGSAKGWRFNAKVLRWACYALAKMGGAGYQVLRDVLHLPHIKHVQKIVAASTSTKMGEQYHLIEAFAKMACEDNXSTSRYVELFWFYSLLWRPYGLVFDLLGILVWDLMHLNQNDFRVCPNGGGIEGLVDRDSFFRHPLDAVQGVDEHITLEKTLETFVATQYLEVFWVSIGNPKYKF 457          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig661.48.4 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 11
Match NameE-valueIdentityDescription
D7FZI2_ECTSI2.080e-11046.55Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KVF4_9PHAE2.670e-11048.01Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G2I2_ECTSI5.060e-10546.09Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7G5R1_ECTSI1.110e-8760.19Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5L5M0_9PHAE3.330e-6762.42Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FVM8_ECTSI2.550e-6139.62Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KCN5_9PHAE2.580e-5541.90Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KQL9_9PHAE2.010e-3643.03Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K7Z3_9PHAE5.310e-3539.41Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KFP1_9PHAE4.060e-3237.27Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig661contigP-littoralis_Contig661:85351..87561 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Model size1143
Hectar predicted targeting categoryother localisation
Exons5
Cds size1140
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791382.5351906-CDS-P-littoralis_Contig661:85351..853931680791382.5351906-CDS-P-littoralis_Contig661:85351..85393Pylaiella littoralis U1_48CDSP-littoralis_Contig661 85352..85393 -
1680791382.5500298-CDS-P-littoralis_Contig661:85557..857941680791382.5500298-CDS-P-littoralis_Contig661:85557..85794Pylaiella littoralis U1_48CDSP-littoralis_Contig661 85558..85794 -
1680791382.564399-CDS-P-littoralis_Contig661:86291..865071680791382.564399-CDS-P-littoralis_Contig661:86291..86507Pylaiella littoralis U1_48CDSP-littoralis_Contig661 86292..86507 -
1680791382.5773711-CDS-P-littoralis_Contig661:86737..869501680791382.5773711-CDS-P-littoralis_Contig661:86737..86950Pylaiella littoralis U1_48CDSP-littoralis_Contig661 86738..86950 -
1680791382.596927-CDS-P-littoralis_Contig661:87129..875611680791382.596927-CDS-P-littoralis_Contig661:87129..87561Pylaiella littoralis U1_48CDSP-littoralis_Contig661 87130..87561 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig661.48.4prot_P-littoralis_Contig661.48.4Pylaiella littoralis U1_48polypeptideP-littoralis_Contig661 85352..87561 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig661.48.4

>prot_P-littoralis_Contig661.48.4 ID=prot_P-littoralis_Contig661.48.4|Name=mRNA_P-littoralis_Contig661.48.4|organism=Pylaiella littoralis U1_48|type=polypeptide|length=380bp
VLHAVECVRPCEGVCRRHLVEDQTLDPECARHFGSVTRMAQRTLENSPDA
LVGDDRWASANVRGFLKSPNGCVSGVLGLRGHDDVLWSRRCRGVATNVDG
SLGVARCSECKDFYRRSVTRRTIQAAKHTPDRSTRIGDMSTGQKERTIHL
INRDRKKKAAEIARLREELHVARKDFVKFNKKQGEALHELFMDPKSKEVL
CTKLPKDSAERAIYEDQVRWNSTHGAAKGFRFHPTTLRIAIYMHGMIGTS
AYNLVSNLLHLPSIARVKQLRRQARPPQTGVLRDNIKKYGNLAAHHDADK
ADLTGILTWDLMHLNKHGFNYSPNAGGITGLIDETTFFHPVYNEKNHEGE
DLEKTIGRIVANQYVEMFFVSLGNPEYKFA
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mRNA from alignment at P-littoralis_Contig661:85351..87561-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig661.48.4 ID=mRNA_P-littoralis_Contig661.48.4|Name=mRNA_P-littoralis_Contig661.48.4|organism=Pylaiella littoralis U1_48|type=mRNA|length=2211bp|location=Sequence derived from alignment at P-littoralis_Contig661:85351..87561- (Pylaiella littoralis U1_48)
GTTCTGCACGCGGTGGAATGTGTACGGCCTTGTGAGGGAGTCTGCCGACG TCATCTCGTGGAGGACCAGACGTTGGATCCCGAATGCGCAAGGCATTTCG GAAGTGTGACGCGCATGGCTCAACGCACACTCGAGAACAGTCCGGACGCT CTCGTTGGCGACGACCGCTGGGCCTCTGCGAACGTAAGGGGATTCCTCAA AAGCCCCAACGGCTGTGTTTCGGGCGTACTGGGCCTGCGGGGTCACGACG ATGTGCTGTGGTCAAGGCGCTGTCGTGGTGTCGCTACGAACGTGGATGGT AGCTTAGGGGTGGCGCGATGTAGTGAGTGCAAGGATTTCTACCGCCGTTC GGTGACCAGGCGAACGATCCAAGCTGCGAAGCACACTCCGGACAGATCCA CCAGGATCGGAGACATGAGCACTGGCCAAAAGGTGAGAAAACCAACTTAA TGCAAGCATGCCGAAGTTTACTGGGATAGGTCCTCTCTGAATGCTCTCTT CATCTATATGGCGCATTCCGTCCTGTAATGCAGTATATACTTGCGGGATT TTGTGGTGCATTTGTTGAAGTGTATCCGCACGTCCGCCATGCGTCCCACA AACTTCCTCAGGAGAGGACGATCCATCTGATCAACCGGGACAGGAAGAAG AAAGCGGCGGAGATTGCGCGACTGCGGGAGGAGCTGCACGTGGCCCGGAA GGATTTCGTCAAGTTCAATAAAAAACAAGGCGAGGCTCTCCACGAGCTCT TCATGGACCCCAAGTCCAAGGAGGTGCTCTGCACCAAGCTCCCGAAGGAT AGCGCCGAACGAGCGATATACGAGGTACGCCGTTTTCTAGCCTCTATCGT TGACTCTGTCGTCGTTTGGAGTCTGTTTTATGTTTGGCTGCATGTACTTA TGGTGATGCGGGTTCAACTTTTACGACACCAGGTCTACTTATTGCTTATA GCGTACGAATGCATGCTTGTGTTTTGTTTTGTTTGCCGTTATTTTTTTTT TCATCTTTCCAACGTATCGTGTGCTTTTGGCGTCCTTGCCTTGCTTTCGA ACAGGACCAGGTGCGGTGGAACTCGACGCACGGAGCTGCGAAGGGGTTCA GGTTCCATCCGACTACCCTGAGGATCGCCATCTACATGCACGGGATGATT GGGACGTCGGCGTACAACCTTGTGAGCAATTTGCTACACCTACCCTCCAT CGCACGCGTGAAGCAGCTTCGACGGCAGGCGAGGCCGCCACAAACGGGAG TGTTGCGGGATAACATCAAGGTACAAGTGTTGCAGCACAGCCAGAGTTGC AGCTTGTTGGATCGGGTTCCGCCCGTTCTGTTCTCGATATGCGACGGAGT GGTTTTCTCTGTTGCCAGATTTACGGATTACTTTCAGCGCTGCTGCGAAC CATATGGTGCCCTGTGGGCTCGTTGATGTCGACAAGACATCCTGAAAAGT TTTTTTTACCCCTCTACACGCGAAGGGTTGTACAAAAGTATGAATCATAC TATTGGGTCGACTTGCCGTGCAGGAGGTGTGGGCGCACAAAGCTGAAATC TTGTTTATCGAAAGTCAAGACATGCAGGTTCTCGTTTGGCAATCCGTTAG GCTAGATCGAGTATGTTTGCGCGCGCGTAGCTGGTACTTCACCCGCCACT TCGCAACGTTGATTCCCGCCGCTGGCTTGGCTTTGTTGGGGCGGTTCGTT TCTCACACTCTTTCGACGTCCCGATCCCCCCGGCCCATTTCTGTTTTTGC TGTCTATCCCATTGTAGAAGTACGGGAACTTGGCCGCACACCACGACGCC GACAAGGCCGATTTGACCGGCATCCTGACCTGGGACTTGATGCACCTGAA CAAGCACGGCTTCAACTATTCCCCCAACGCCGGTGGCATTACGGGGCTAA TAGATGAGACGACGTTCTTCCACCCTGTCTACAACGAGAAGAACCACGAG GGCGAGGACTTGGAGAAGACGATCGGCCGAATCGTCGCCAACCAGTATGT CGAGGTACGTAATGACGTAGTGCTTCTTCCCGTCCGCTTTGCGCCATTTC CTCCGAGAGATGAAAGGGTGGAGAAGGGTTTTTCGACAGCGGGCGAATTT CTCAACGCGTGTTAGGGTTAAACAGAAACTGATCTCCCTCAACCTTCCCC TTCTCTCGTGTGTTGCAGATGTTTTTCGTTAGCCTCGGCAACCCGGAGTA CAAGTTCGCTG
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Coding sequence (CDS) from alignment at P-littoralis_Contig661:85351..87561-

>mRNA_P-littoralis_Contig661.48.4 ID=mRNA_P-littoralis_Contig661.48.4|Name=mRNA_P-littoralis_Contig661.48.4|organism=Pylaiella littoralis U1_48|type=CDS|length=1140bp|location=Sequence derived from alignment at P-littoralis_Contig661:85351..87561- (Pylaiella littoralis U1_48)
GTTCTGCACGCGGTGGAATGTGTACGGCCTTGTGAGGGAGTCTGCCGACG
TCATCTCGTGGAGGACCAGACGTTGGATCCCGAATGCGCAAGGCATTTCG
GAAGTGTGACGCGCATGGCTCAACGCACACTCGAGAACAGTCCGGACGCT
CTCGTTGGCGACGACCGCTGGGCCTCTGCGAACGTAAGGGGATTCCTCAA
AAGCCCCAACGGCTGTGTTTCGGGCGTACTGGGCCTGCGGGGTCACGACG
ATGTGCTGTGGTCAAGGCGCTGTCGTGGTGTCGCTACGAACGTGGATGGT
AGCTTAGGGGTGGCGCGATGTAGTGAGTGCAAGGATTTCTACCGCCGTTC
GGTGACCAGGCGAACGATCCAAGCTGCGAAGCACACTCCGGACAGATCCA
CCAGGATCGGAGACATGAGCACTGGCCAAAAGGAGAGGACGATCCATCTG
ATCAACCGGGACAGGAAGAAGAAAGCGGCGGAGATTGCGCGACTGCGGGA
GGAGCTGCACGTGGCCCGGAAGGATTTCGTCAAGTTCAATAAAAAACAAG
GCGAGGCTCTCCACGAGCTCTTCATGGACCCCAAGTCCAAGGAGGTGCTC
TGCACCAAGCTCCCGAAGGATAGCGCCGAACGAGCGATATACGAGGACCA
GGTGCGGTGGAACTCGACGCACGGAGCTGCGAAGGGGTTCAGGTTCCATC
CGACTACCCTGAGGATCGCCATCTACATGCACGGGATGATTGGGACGTCG
GCGTACAACCTTGTGAGCAATTTGCTACACCTACCCTCCATCGCACGCGT
GAAGCAGCTTCGACGGCAGGCGAGGCCGCCACAAACGGGAGTGTTGCGGG
ATAACATCAAGAAGTACGGGAACTTGGCCGCACACCACGACGCCGACAAG
GCCGATTTGACCGGCATCCTGACCTGGGACTTGATGCACCTGAACAAGCA
CGGCTTCAACTATTCCCCCAACGCCGGTGGCATTACGGGGCTAATAGATG
AGACGACGTTCTTCCACCCTGTCTACAACGAGAAGAACCACGAGGGCGAG
GACTTGGAGAAGACGATCGGCCGAATCGTCGCCAACCAGTATGTCGAGAT
GTTTTTCGTTAGCCTCGGCAACCCGGAGTACAAGTTCGCT
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