mRNA_P-littoralis_Contig661.46.3 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig661.46.3 vs. uniprot
Match: A0A6H5K5I6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K5I6_9PHAE) HSP 1 Score: 271 bits (692), Expect = 1.480e-84 Identity = 144/254 (56.69%), Postives = 179/254 (70.47%), Query Frame = 2
Query: 269 KVVGGTVIAAITEKMEEHGWDGALAGYKGLAIEMNDFVDIFNGNYARRKVDRLSGTRKGDGYIKSATSAHLERLIDILLHFEKWQNSLQEKN-KELEGGEHAWKKHFITRESWFDLRLCILGFVSTCRFLFDRPAIFQVDSLSPNDRRFIGPRNLSQDLIEHRFSHYRGNNGTHRNPTAQEVKTRSQTGDVIRALNGKTRRNSNINANARVGQDF--HVADTSGEIMMAVTREETSRRIRAASRNTHKSVLCPR 1021
+VV G +I AI + ME +G +GA Y+ LA +MNDFVDIFNGNY R KVDR G++K G I+S SA ++RL++IL F+ WQ++L+ K+ EG + WKKHFIT +SWFDLRL ILGFVS CR+LF+ P FQ+DSLSPN RRF+ PRN SQD+ EHRFSH R GTHRNPTA+E K RS GD+ RA NGK RRN++ N NAR G DF H I++AVT+ ET + +RA RNT VLCPR
Sbjct: 23 QVVSGMIIDAIADYMEANGRNGAAECYQTLARQMNDFVDIFNGNYGRSKVDRKDGSKKMVGCIRSFESAPMDRLLEILEFFDDWQSTLERKHIPSGEGDKLGWKKHFITHQSWFDLRLSILGFVSMCRYLFEDPERFQIDSLSPNCRRFLSPRNCSQDICEHRFSHIRAALGTHRNPTAREAKKRSAVGDLCRATNGKRRRNASRNPNARSGGDFEEHGDSEKKAIILAVTKVETGKEVRAWCRNTPAEVLCPR 276
BLAST of mRNA_P-littoralis_Contig661.46.3 vs. uniprot
Match: A0A6H5JR14_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JR14_9PHAE) HSP 1 Score: 261 bits (668), Expect = 1.840e-75 Identity = 153/368 (41.58%), Postives = 213/368 (57.88%), Query Frame = 2
Query: 2 KKIVNALWHSDIPDKQRDLGVWASERDGESKKFFRFSLKTGERVFNEIEYEGKQLSMNEKSAMVSTFRHHSQAIWRRDNHSCMNVSHSTKVVGGTVIAAITEKMEEH------GWDGALAGYKGLAIEMNDFVDIFNG-----------------------NYARRKVDRLSGTRKGDGYIKSATSAHLERLIDILLHFEKWQNSLQEKNKELEGGEHAWKKHFITRESWFDLRLCILGFVSTCRFLFDRPAIFQVDSLSPNDRRFIGPRNLSQDLIEHRFSHYRGNNGTHRNPTAQEVKTRSQTGDVIRALNGKTRRNSNINANARVGQDFHVADTSGEIMMAVTREETSRRIRAASRNTHKSVLCP 1018
KKI N WHSD K+R+L +W + +G + RFSL T ERV+N++E +G LS EK A ++TFR + + R++ +CMNVS+S KV+ GT++ I EK++ D L Y LA +M+ F+DIFNG N+ R + R +G K GYI SA + LE LI+++ F+KW++SLQEK G+ WKKHFIT SW D+R+CILGFVS CR+LF+ + F+V P FI RN QD+IEH F H R G+HRNPTA + K R GD++R L+G R +N N NAR G+DF + E+M+ V E S RIRA ++++ ++VL P
Sbjct: 392 KKIANTCWHSDQDSKKRELAMWCGDEEGNTD-LVRFSLATAERVYNQVENDGNTLSQEEKVASITTFRKVVPSCFNRNSWNCMNVSYSAKVLSGTIVCMI-EKVQRDLLTMGKPLDLELDCYAALAAKMDAFIDIFNGKLYIIFVLAYCLVFLKQQMWWSGNFGRSEYARRNGLDKEAGYISSADDSKLEELINMVRFFDKWRSSLQEKTTM---GDETWKKHFITEFSWTDIRVCILGFVSMCRYLFEEDSRFKVSPRRPWPH-FINQRNCGQDVIEHCFGHMRQGLGSHRNPTAAQAKERGARGDILRGLHGPCR--ANYNRNARKGRDFVASGYRAEVMLPVGEGERSVRIRARTKDSDEAVLSP 751
BLAST of mRNA_P-littoralis_Contig661.46.3 vs. uniprot
Match: D7FZI2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZI2_ECTSI) HSP 1 Score: 234 bits (596), Expect = 4.980e-64 Identity = 146/355 (41.13%), Postives = 195/355 (54.93%), Query Frame = 2
Query: 2 KKIVNALWHSDIPDKQRDLGVWASERDGESKKFFRFSLKTGERVFNEIEYEGKQLSMNEKSAMVSTFRHHSQAIWRRDNHSCMNVSHSTKVVGGTVIAAITE---KMEEHGW--DGALAGYKGLAIEMNDFVDIFNGNYARRKVDRLSGTRKGDGYIKSATSAHLERLIDILLHFEKWQNSLQEKNKELEGGEHAWKKHFITRESWFDLRLCILGFVSTCRFLFDRPAIFQVDSLSPNDRRFIGPRNLSQDLIEHRFSHYRGNNGTHRNPTAQEVKTRSQTGDVIRALNGKTRRNSNINANARVGQDFHVADTSGEIMMAVTREETSRRIRAASRNTHKSVLCPRSASRPPSYAS 1051
KKIVNALWHSDIP KQR LG+W D + KF +FSLKT +RV+N++EY+ ++ E++A ++ F + R N +CMNV S KVV GT++ AI E E G D AL Y+GLA+ +NDFVDIFNG+Y R K +R + K GY+ SA LERL++IL +F+ W + LQE GG+ WKKHFITR S + L+ +H R GT RNPTA + K RS GD+ R L+G +R +N N NAR G DF+V+D G IM+AVT+ + +R+ SRN+ +VLCPR S P A+
Sbjct: 708 KKIVNALWHSDIPAKQRQLGMWCVT-DQDELKFSQFSLKTAQRVYNDVEYDNDSMTPEERAATLTIFPGMPVGAFNRTNFTCMNVKLSAKVVSGTIVRAIREVRANQETRGESPDLALGCYEGLAVHLNDFVDIFNGDYGRTKFERRAKINKMKGYVTSAEDPILERLMEILRYFDDWNDMLQEFPPPTGGGDVGWKKHFITRHS--------------------------------------------RTLV---CAHIRAGLGTLRNPTAAQAKERSVRGDLNRGLHGGSR--ANFNRNARSGDDFNVSDYRGRIMLAVTQAVAAENVRSRSRNSPNAVLCPRYISVEPLAAT 1012
BLAST of mRNA_P-littoralis_Contig661.46.3 vs. uniprot
Match: A0A6H5K7Z3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K7Z3_9PHAE) HSP 1 Score: 196 bits (498), Expect = 6.360e-52 Identity = 124/311 (39.87%), Postives = 166/311 (53.38%), Query Frame = 2
Query: 8 IVNALWHSDIPDKQRDLGVWASERDGESKKFFRFSLKTGERVFNEIEYEGKQLSMNEKSAMVSTFRHHSQAIWRRDNHSCMNVSHSTKVVGGTVI---AAITEKMEEHGWDGALAGYKGLAIEMNDFVDIFNGNYARRKVDRLSGTRKGDGYIKSATSAHLERLIDILLHFEKWQNSLQEKNKELEGGEHAWKKHFITRESWFDLRLCILGFVSTCRFLFDRPAIFQVDSLSPNDRRFIGPRNLSQDLIEHRFSHYRGNNGTHRNPTAQEVKTRSQTGDVIRALNGKTRRNSNINANARVGQDFHVADTSG 931
+VNALW+S +P KQR L RD E ++ FSLKT E V+ E G LS E ++ + F + R++H+CM+V S K V T + EK+ +G +A Y LA MNDF+DI NG Y +V+R G K GYI A S L RL++IL F+ WQ SL E G W HFIT SW D+R ILGFV+ CR++F D + RF+ PR SQD++EHRF+H R GTH+NPTA + ++ GD R +G RRNS+ +A G F + D+ G
Sbjct: 344 VVNALWYSSLPSKQRHLKNLFWNRDTEEFEWVSFSLKTLETVWVNEERGGGSLSAAEVASNLRRFLKFEPEMLDRNSHNCMSVRLSAKCVSRTAVYVCGCAQEKLASP--NGEIACYAELAEVMNDFLDIMNGVYGLNEVERKQGGNKRKGYITGADSPLLGRLLEILEFFDSWQVSL-----EAHFGPKEWANHFITDYSWTDMRTTILGFVAMCRYVFK-------DEDLVSGGRFLYPRMFSQDILEHRFAHIRSGRGTHKNPTAMQAIEAARAGDTARMFHGTRRRNSSRSA----GMAFQLEDSQG 636
BLAST of mRNA_P-littoralis_Contig661.46.3 vs. uniprot
Match: A0A6H5JTX6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTX6_9PHAE) HSP 1 Score: 125 bits (314), Expect = 1.620e-29 Identity = 76/188 (40.43%), Postives = 110/188 (58.51%), Query Frame = 2
Query: 380 VDIFNGNYARRKVDRLSGTRKGDGYIKSATSAHLERLIDILLHFEKWQNSLQEKNKELEGGEHAWKKHFITRESWFDLRLCILGFVSTCRFLFDRPAIFQVDSLSPNDRRFIGPRNLSQDLIEHRFSHYRGNNGTHRNPTAQEVKTRSQTGDVIRALNGKTRRNSNINANARVGQDFHVADTSGEIMM 943
V I GN+ R R +G K GY SA + LE L+DIL F++W+ SL+ + + WK HFIT SW D+R+CILG VS CR+LF++ + F++ LS + FI R + QD++EHR+ H G+H NPTA + K R+ D+ R+L+G +R N +AR G+DF + G IM+
Sbjct: 32 VRIHAGNFGRSDYARKNGLDKMVGYTGSADDSKLEGLMDILRFFDEWRASLEARPTLGD-----WKAHFITDHSWTDIRVCILGTVSMCRYLFEKDSRFKIYPLS-DVPHFINLRCIGQDIVEHRYGHMCQCLGSHCNPTAAQAKERAAQEDLQRSLHGISRAN-----HARKGEDFIASGIRGRIML 208
BLAST of mRNA_P-littoralis_Contig661.46.3 vs. uniprot
Match: A0A6H5KVF4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KVF4_9PHAE) HSP 1 Score: 127 bits (320), Expect = 1.190e-27 Identity = 70/146 (47.95%), Postives = 91/146 (62.33%), Query Frame = 2
Query: 2 KKIVNALWHSDIPDKQRDLGVWASERDGESKKFFRFSLKTGERVFNEIEYEGKQLSMNEKSAMVSTFRHHSQAIWRRDNHSCMNVSHSTKVVGGTVIAAITE---KMEEHGW--DGALAGYKGLAIEMNDFVDIFNGNYARRKVDR 424
KKIVNALWHSDIP KQR LG+W D + KF +FSLKT +RV+N++EY+ ++ E+ A ++ F + R N +CMNV S KVV GT++ AI E E G D AL Y+GLA+ +NDFVDIFNG R + R
Sbjct: 799 KKIVNALWHSDIPAKQRQLGMWCVT-DQDELKFSQFSLKTAQRVYNDVEYDNDSMTPEERPATLTIFPGMPVGAFNRTNFTCMNVKLSAKVVSGTIVRAIREVRANQETRGESPDLALGCYEGLAVHLNDFVDIFNGEETTRGLAR 943
BLAST of mRNA_P-littoralis_Contig661.46.3 vs. uniprot
Match: A0A6H5L5M0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L5M0_9PHAE) HSP 1 Score: 115 bits (287), Expect = 1.530e-23 Identity = 65/136 (47.79%), Postives = 86/136 (63.24%), Query Frame = 2
Query: 2 KKIVNALWHSDIPDKQRDLGVWASERDGESKKFFRFSLKTGERVFNEIEYEGKQLSMNEKSAMVSTFRHHSQAIWRRDNHSCMNVSHSTKVVGGTVIAAITE---KMEEHGW--DGALAGYKGLAIEMNDFVDIFN 394
KKIVNALWHSDIP KQR LG+W D + KF +FSLKT +RV+N++EY+ ++ E++A ++ F + + R N +CMNV S KVV GT++ AI E E G D AL Y+G +NDFVDIFN
Sbjct: 606 KKIVNALWHSDIPAKQRQLGMWCVT-DQDELKFSQFSLKTAQRVYNDVEYDNNSITPEERAATLTIFPGMPVSAFNRTNFTCMNVKLSAKVVSGTIVRAIREVRANRETRGEPPDLALGCYEG---HLNDFVDIFN 737
BLAST of mRNA_P-littoralis_Contig661.46.3 vs. uniprot
Match: A0A6H5K6I9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K6I9_9PHAE) HSP 1 Score: 103 bits (257), Expect = 1.310e-20 Identity = 94/315 (29.84%), Postives = 123/315 (39.05%), Query Frame = 2
Query: 272 VVGGTVIAAITE---KMEEHGW--DGALAGYKGLAIEMNDFVDIFNG--------------------------------------------------NYARRKVDRLSGTRKGDGYIKSATSAHLERLIDILLHFEKWQNSLQEKNKELEGGEHAWKKHFITRESWFDLRLCILGFVSTCRFLFDRPAIFQVDSLSPNDRRFIGPRNLSQDLIEHRFSHYRGNNGTHRNPTAQEVKTRSQTGDVIRALNGKTRRNSNINANARVGQDFHVADTSGEIMMAVTREETSRRIRAASRNTHKSVLCPRSASRPPSYAS 1051
VV GT++ AI E E G D AL Y+GLA+ +NDFVDIFNG +Y R K +R + K GY+ SA LERL++IL +F+ W ND + Q ++EHRF R GT RNPTA + K RS GD+ R L+G +R +N N NAR G DF +D IM+AVT+ E + +RA SRN+ +VLCPR S P A+
Sbjct: 95 VVSGTIVRAIREVRANRETRGEPPDLALGCYEGLAVHLNDFVDIFNGEETKCGLTRKRRHTCNIESKSPGRGVKLKVAAINSYVPFTRSDHFAVHTGDYGRTKFERRAQINKMKGYVTSADDPILERLVEILRYFDDW-----------------------------------------------------------ND--------MMQIILEHRFKDVRAGLGTLRNPTAAQAKERSVRGDLNRGLHGGSR--ANFNRNARSGNDFIDSDYRSRIMLAVTQAEAAENVRARSRNSPNAVLCPRYISVEPLAAA 340
BLAST of mRNA_P-littoralis_Contig661.46.3 vs. uniprot
Match: A0A6H5JRH8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRH8_9PHAE) HSP 1 Score: 86.7 bits (213), Expect = 2.960e-14 Identity = 47/113 (41.59%), Postives = 69/113 (61.06%), Query Frame = 2
Query: 398 NYARRKVDRLSGTRKGDGYIKSATSAHLERLIDILLHFEKWQNSLQEKNKELEGGEHAWKKHFITRESWFDLRLCILGFVSTCRFLFDRPAIFQVDSLSPNDRRFIGPRNLSQ 736
N+ R R +G K YI+SA + LE ++DILL F++W+ SL+ + G+ AWK HFIT SW D+R+CILG VS CR++F+ + F++ LS + FI R + Q
Sbjct: 428 NFGRSDYARKNGLDKMVSYIRSADDSKLEEVMDILLLFDEWRASLEARPTL---GDGAWKAHFITDHSWTDIRVCILGTVSMCRYVFEEDSTFKIPPLS-DVPHFINLRYIGQ 536
BLAST of mRNA_P-littoralis_Contig661.46.3 vs. uniprot
Match: A0A6H5KYD6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KYD6_9PHAE) HSP 1 Score: 72.8 bits (177), Expect = 7.140e-12 Identity = 42/92 (45.65%), Postives = 61/92 (66.30%), Query Frame = 2
Query: 2 KKIVNALWHSDIPDKQRDL-GVWASERDGESKKFFRFSLKTGERVFNEIEYEGKQLSMNEKSAMVSTFRHHSQAIWRRDNHSCMNVSHSTKV 274
KK+VNALWHS + DKQRDL G+W + E +++ FSLKT E V+N+ E G S E++A +S FR + ++ R++H+CM+V S KV
Sbjct: 30 KKVVNALWHSGLADKQRDLKGLWWDPKT-EEEEWVSFSLKTLEEVWNQEEAGGGIRSGAEQAAHLSRFRKVNPEMFYRNSHNCMSVKLSAKV 120 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig661.46.3 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 12
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig661.46.3 >prot_P-littoralis_Contig661.46.3 ID=prot_P-littoralis_Contig661.46.3|Name=mRNA_P-littoralis_Contig661.46.3|organism=Pylaiella littoralis U1_48|type=polypeptide|length=351bp MNEKSAMVSTFRHHSQAIWRRDNHSCMNVSHSTKVVGGTVIAAITEKMEEback to top mRNA from alignment at P-littoralis_Contig661:82619..84675- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig661.46.3 ID=mRNA_P-littoralis_Contig661.46.3|Name=mRNA_P-littoralis_Contig661.46.3|organism=Pylaiella littoralis U1_48|type=mRNA|length=2057bp|location=Sequence derived from alignment at P-littoralis_Contig661:82619..84675- (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig661:82619..84675- >mRNA_P-littoralis_Contig661.46.3 ID=mRNA_P-littoralis_Contig661.46.3|Name=mRNA_P-littoralis_Contig661.46.3|organism=Pylaiella littoralis U1_48|type=CDS|length=1053bp|location=Sequence derived from alignment at P-littoralis_Contig661:82619..84675- (Pylaiella littoralis U1_48)back to top |