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Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Stop | 0 |
| Start | 0 |
| Model size | 326 |
| Hectar predicted targeting category | other localisation |
| Exons | 3 |
| Cds size | 324 |
Relationships
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1680791381.6719954-CDS-P-littoralis_Contig661:75792..75960 | 1680791381.6719954-CDS-P-littoralis_Contig661:75792..75960 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig661 75793..75960 + |
| 1680791381.683171-CDS-P-littoralis_Contig661:78757..78861 | 1680791381.683171-CDS-P-littoralis_Contig661:78757..78861 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig661 78758..78861 + |
| 1680791381.698691-CDS-P-littoralis_Contig661:79033..79085 | 1680791381.698691-CDS-P-littoralis_Contig661:79033..79085 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig661 79034..79085 + |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig661.41.1 >prot_P-littoralis_Contig661.41.1 ID=prot_P-littoralis_Contig661.41.1|Name=mRNA_P-littoralis_Contig661.41.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=108bp
RPFVSGGDQGFWHLPHTHVGPHTSARGPRAEAKPLGSPEHCTSGASSPRF
SDGRFAVVQTWRRKMCETPPKPERLRLKTCRLFRRDGCSPRGMKSTGTTR
MTSWLSTT back to topmRNA from alignment at P-littoralis_Contig661:75793..79085+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_P-littoralis_Contig661.41.1 ID=mRNA_P-littoralis_Contig661.41.1|Name=mRNA_P-littoralis_Contig661.41.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=3293bp|location=Sequence derived from alignment at P-littoralis_Contig661:75793..79085+ (Pylaiella littoralis U1_48)
AGGCCTTTCGTCTCGGGCGGGGATCAGGGATTCTGGCACCTTCCACACAC
ACACGTCGGCCCTCACACCTCGGCACGCGGTCCACGCGCGGAGGCGAAAC
CTCTTGGGTCACCTGAGCATTGCACCAGTGGAGCCTCGAGTCCAAGGTTC
AGCGACGGAAGGTTCGCGGTGAGTGCAAAAATCGTATTTCCTAGGGTCTC
ACAGGCGGCCCCTTCTGACCCCGGCTTCCGACTACCCTCTGTAGCACGAC
AGCGTGCTCCTTCCACAGCGGTGGCAAGTGTAGGCTCGCCCATCCCAGCC
GTTCGCCATACTCATGATCTACTCTCGGGAGCAATCCGCGTGGGAAACGA
TCGTGTGTGGGCGAAGATATCAACACATACATGGGCACATGTCATATTCG
GTTAGGGTTACGCCGCACCAACAGGCGCACGCGGTGCTGTTTTTAGGTTT
TTGCTTGTATTTTTTTTTTTTTTAAACTTACCAAGACATCAATGTGTTCG
TCTCTCTCCAGCCAAGGATCTCGAGCAGATATTGCAACGAACACAAAGAG
TGAAATACGTCTACCAGTGTTTCTATACTCAACAACCAGTGTACCGTTGC
AGCTCCCCTGAGGGTATCAGGCTCAACAAGACAATTTGGTGGTCGTCTTG
TGTGACACACGTTACACCATGAGTTGAGTGTTTACGATCTATATTTGTGC
TGTTTGCATCATCCTTGGCATAGTGATGGTGGTGATTTGATGTTTTTCGT
GCAGCAGCAGTGGATTTTACGTTCCTACAGACAAGAACACCGTTTTGAGT
TCCACAAATATATGCAATCTACAAAGTACTTCTTACTTTACGTTTCCCAT
ATGATTTTACGTTCCTACAGACAAGAACACCGTTTTGAGTTCCACAAATA
TATGCAATCTACACAGTACTTCTTACTTTACGTTTCTCATATGTATAGCG
AAGTACGATGCATCCGTGATGGCCCGTTTACGAAGGACATGCATGTGTAT
AGCTACCGTGCTCTCCACCAGCTCAACTATACTCACATGTACTTATTATG
TAGCGGGGTACAACATATAATCTACATGCGATAGCCTCACCAAGTTTGAC
GTGTAAGTTGCCCAGTGCGGTTCATTTTGATGCAGAATGACGTTCCACAT
ACACGTTGTACAGCAGTTTTCAGTTGCCTCTTTGTTGTTGTTGCGTGTAT
GCCTGCCTCGATTTCCACATCATCCAATGTGAATATACTTTGCACATACC
TGTTATTGTTGGTGAGACGATTTGGGTCAGACGATGCCGAATCGAAAATA
TGGGCGACCTGGAGGAAGCCCCTGATGGGTGAAATGCTACTATTAATGTA
CTCTGGAGTATGACTACAAATTCGCTATAAATTCGCTACAAGTATACGAT
ATATAGTCATACTCCATAGGTGCCACTATGTCCCCTCTTGTGCCATCTTG
TGCGTAAGAGGGGGGGTAGTTGTGAGTGTAGGACCCCGTCGTGCATGCTG
GGATTTTTCACTTTAGGGCGGGCCTTGTACATTTTCTCGTGTATAGCACT
GCTGCACTAGTCTAGTCTTGCTGCGGCAGTTCAGCATCAGAAATTGCCCG
CCGTAGGTAGTCGTGCCCTCAAAGTTTGCCAATTTTTTTCGTGGGTCCAA
ATCTCGCAACAGTACAGGACGTAAGGCGGTTTCTTGTAGGGCCGGATTTT
TTTTTAATTTTTTGATAGAATCCGAACGAACTTTTTCCGGCCAACGGTTG
CCGATCCGCTGTTCTTATAGGTAAATAGGTGTTCGGATTTTCGGTGATCC
CTTTTTTTGAGTATGTGGTTGAAGAGTCGGCTCCAGAGTGTATCTGCATC
GAAGGACCGCAGGATGGTGTTTTTTGCGCTGAAACCCGTTTGCATCGCCG
CTCGTAACTTTCGAACGAATGAAGACACAGCAATGACGAAGGCATCTTCC
GTGAGCTGTGTATATGATCCCCCTCGTGTCGTGATCGCTTGGGTTAGGGT
TACATCCGTACGTTCGCAACGTAGGTTTGCTCATGGCCAACTCATGCGAA
ACAAATTGAGAAAGATGTATCAGCCGGACTGCTGTACAGCAGCATTATTA
TATACTGCTGTATGTAGTTGTACAGCAGTAGAGAAAGGAGATGACAGCTC
GGGTTCTTTTTTACAACACAACATGCCACAGCCACGAGCGATGACCATTT
TGCGAACATGCCAGTGTAATCCTCACCCAAACGATTACCACACGAGGGGA
GCCATACGCACAGCTCACGGGAGATGGGCTTGTCATCGCTGTGGCTTCAT
TCATTGGGGAGTTACGAGCGAAGATGCAACTTGTGGTCTCTCTCAGAGGA
AGCTTTGATACTCCTCCTCCTGCTGCTGCTGCTGTGCTGATGATGCTACT
GCTACATACGATTGGTTTTGGCTGCTGATGAACACGATGGAATGAACGAT
GACACGGCAAGCGCACGCAGAAAGATGGTGGACACATATTATATATGGAC
AGCAGCAAGCAGTAGTAGCAGCAGCAGCAGGAGCAGCAGCTGCAACAACA
CAGAAAGTAGTAGCAGAGCTCTCCTCCTCTGATGCTCTGTTGTGATTAAT
ATCGTTTGTTTTGTCCACACACAAAGAGAGAGATAACTTCACACATTTTt
cTTTTATATATTTTCCGATCGTGCTTTCCGAACCGATCCAGCGTTCGGAA
AATGTCCGATTTTCCGAACGAAATCCGATTAAAAGCTGTTCGGAAAATTT
TGTTCGGAAAATTTTGTTCGGAAAATGTTGTTCGGAGAAAGGTGTTTTCC
GAGCCTTTAAGAAGCCTTGACTCTAAAAAAATTCGGAATCTATCAAAAAA
TGAATAAAATATCCGGCCCTACAAGAAACCGCCTAAGCCCTGAAAAGACT
GGCGTGGTATTGCTTCATCACGAAGGTATACTCATTCATGCCTAAATATG
TACGTCGAACGTTAGGTTGTTCAGACATGGAGACGGAAGATGTGCGAGAC
GCCGCCGAAGCCGGAGCGGCTGCGGTTGAAGACATGTCGCCTGTTCCGGC
GAGACGGATGTTCGCCGAGGTAAGACAGCGACCCTTGCATGCAAGACCTA
GGTTTCTCTGGCTCAGAATAAGCATGTTGTGCTTTCATCGGCTGGCAATT
GGGGCGCTTCTTCCGCGACATGTCCGCCTACGCACCCGTTAAACCCCCCC
CCCGCCCTTGGGCCCCCATCTCTGTACTTTGCCCATACCAGGGGGATGAA
GAGTACGGGGACGACGAGGATGACGTCGTGGCTATCAACAACT back to topCoding sequence (CDS) from alignment at P-littoralis_Contig661:75793..79085+ >mRNA_P-littoralis_Contig661.41.1 ID=mRNA_P-littoralis_Contig661.41.1|Name=mRNA_P-littoralis_Contig661.41.1|organism=Pylaiella littoralis U1_48|type=CDS|length=324bp|location=Sequence derived from alignment at P-littoralis_Contig661:75793..79085+ (Pylaiella littoralis U1_48)
AGGCCTTTCGTCTCGGGCGGGGATCAGGGATTCTGGCACCTTCCACACAC
ACACGTCGGCCCTCACACCTCGGCACGCGGTCCACGCGCGGAGGCGAAAC
CTCTTGGGTCACCTGAGCATTGCACCAGTGGAGCCTCGAGTCCAAGGTTC
AGCGACGGAAGGTTCGCGGTTGTTCAGACATGGAGACGGAAGATGTGCGA
GACGCCGCCGAAGCCGGAGCGGCTGCGGTTGAAGACATGTCGCCTGTTCC
GGCGAGACGGATGTTCGCCGAGGGGGATGAAGAGTACGGGGACGACGAGG
ATGACGTCGTGGCTATCAACAACT back to top
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