mRNA_P-littoralis_Contig66.6.2 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig66.6.2
Unique NamemRNA_P-littoralis_Contig66.6.2
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
BLAST of mRNA_P-littoralis_Contig66.6.2 vs. uniprot
Match: D7FWW9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FWW9_ECTSI)

HSP 1 Score: 276 bits (707), Expect = 1.550e-85
Identity = 145/323 (44.89%), Postives = 207/323 (64.09%), Query Frame = 1
Query:    4 LDTPYHSAWSNTKGSNSKTKKPCSTCEVTQEELSDHQYNIGANLRTQDGIDDSLLYVKAGDTAADQARRSRERGVVVPDVDNPLKKLVFDRVRGIGVDILHQDSLNKAKRMIRFLLNALNTDGSALVSGRLKLRSIIPPNAEPLGDVTTDGGFSALTGNQIWVLSSILPLLFRPIFANHMSMKAYVKVADIAAVAQRKGISNCGSVAGLKNVCGAFLDLITACSASSFMVRAKSFTEAELEILLECERDQVEQAFCVMGEALGTFHKGMHIPDNIRDLGAVSNTNPAESKHKQHKKGSASSSGRDNMKHIWRTYNDGVALKAL 972
            LD+P HS W+N K  N+KT++ C  C V + +L + +Y+I  N RT DG+ + L  V A +   D+ + SR  GVVVP   NP  ++ FDRV G G+DILHQ +LN  K+++ F+++AL+  GS +V  R     ++PPN  P+ D+T+ GG+SALTG Q+W++SS  P L  PIF++  ++  YV+   +  VA R  +   G+ AG   VC AF DL+ ACS S F+VR+ SFT   L  L + + +QV+QA  VMG ALGT HKG+HI  N+   G V+N N  E+K+K+ K  + S+SGRDN +HIWR  ND +A+KAL
Sbjct:   36 LDSPLHSLWTNQKHHNAKTERACQACVVPRRDLGNPKYDIVKNARTADGLREDLSRVAATEKKQDRDKLSRALGVVVPRYPNPQDEVAFDRVEGCGMDILHQSALNSGKKIMGFVMDALDPAGSEIVRARFAWCRMLPPNVSPMADITSAGGWSALTGQQLWLVSSSFPFLLAPIFSSPDNLGRYVRTMVVTEVADRISVDP-GTPAGKAAVCNAFQDLVKACSWSCFVVRSPSFTAEGLRALQKSQLEQVKQATRVMGVALGTIHKGLHIARNVVVNGVVTNCNVGEAKNKELKASAPSASGRDNARHIWRATNDSLAIKAL 357          
BLAST of mRNA_P-littoralis_Contig66.6.2 vs. uniprot
Match: D7G4Y8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4Y8_ECTSI)

HSP 1 Score: 244 bits (623), Expect = 2.420e-74
Identity = 129/279 (46.24%), Postives = 182/279 (65.23%), Query Frame = 1
Query:  136 RTQDGIDDSLLYVKAGDTAADQARRSRERGVVVPDVDNPLKKLVFDRVRGIGVDILHQDSLNKAKRMIRFLLNALNTDGSALVSGRLKLRSIIPPNAEPLGDVTTDGGFSALTGNQIWVLSSILPLLFRPIFANHMSMKAYVKVADIAAVAQRKGISNCGSVAGLKNVCGAFLDLITACSASSFMVRAKSFTEAELEILLECERDQVEQAFCVMGEALGTFHKGMHIPDNIRDLGAVSNTNPAESKHKQHKKGSASSSGRDNMKHIWRTYNDGVALKAL 972
            R  DG+ + L  V +     +  + SR  GVVVP   NPL ++ FDRV G G+D+LHQ +LN  K+++ F+L+AL++ GS +V GR   R ++PPN  P+ D+T+ GG++ALTG Q+W++SSI P L  PIF++   +  YV+   +A VA R  + N G+ AG   VC AF DLI ACS SSF+VR+ SFT   L  L + + DQV+Q   VMG ALG+ HKG+HI  N+   G V+N N  E+K+KQ K  + S+SGRDN +H+W T ND +A++AL
Sbjct:   69 RAFDGLREDLALVASIKKKQEHLKMSRALGVVVPRYPNPLDEVTFDRVEGCGMDVLHQSALNAGKKIMTFVLDALDSAGSEIVRGRFAWRRMLPPNVSPMADITSAGGWAALTGQQLWLVSSIFPFLVAPIFSHPNLLDDYVRAMVVAEVADRIDV-NSGTPAGKAAVCAAFQDLIKACSWSSFVVRSPSFTAEGLRTLQKSQIDQVKQVTRVMGVALGSIHKGLHIARNVVVNGVVTNCNVGEAKNKQQKASAPSASGRDNAEHMWHTTNDSLAMQAL 346          
BLAST of mRNA_P-littoralis_Contig66.6.2 vs. uniprot
Match: D7FZI4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZI4_ECTSI)

HSP 1 Score: 244 bits (624), Expect = 1.880e-73
Identity = 125/275 (45.45%), Postives = 181/275 (65.82%), Query Frame = 1
Query:    4 LDTPYHSAWSNTKGSNSKTKKPCSTCEVTQEELSDHQYNIGANLRTQDGIDDSLLYVKAGDTAADQARRSRERGVVVPDVDNPLKKLVFDRVRGIGVDILHQDSLNKAKRMIRFLLNALNTDGSALVSGRLKLRSIIPPNAEPLGDVTTDGGFSALTGNQIWVLSSILPLLFRPIFANHMSMKAYVKVADIAAVAQRKGISNCGSVAGLKNVCGAFLDLITACSASSFMVRAKSFTEAELEILLECERDQVEQAFCVMGEALGTFHKGMHIPDNI 828
            LD+P HS W+N K  N+KT++ C  C V +++L + +Y+I  N R+ DG+ + L  V + +   +Q + SR  GVVVP   NPL ++ FDRV G G+D+LHQ +LN  K+++ F+L+AL++ GS +V GR   R ++PPN  P+ D+T+ GG++ALTG Q+W++SSI P L  PIF++   +  YV+   +A VA R  + N G+ AG   VC AF DLI ACS SSF+VR+ SFT   L  L + + DQV+Q   VMG ALG+ HKG+HI  N+
Sbjct:  130 LDSPMHSLWTNQKHHNAKTERACQACTVPRKDLGNPRYDIVKNARSADGLREDLALVASIEKRQEQLKMSRALGVVVPRYPNPLDEVTFDRVEGCGMDVLHQSALNAGKKIMTFVLDALDSAGSEIVRGRFAWRRMLPPNVSPMADITSAGGWAALTGQQLWLVSSIFPFLVAPIFSHPNLLDDYVRAMVVAEVADRIDV-NSGTPAGKAAVCAAFQDLIKACSWSSFVVRSPSFTAEGLRTLQKSQIDQVKQVTRVMGVALGSIHKGLHIARNV 403          
BLAST of mRNA_P-littoralis_Contig66.6.2 vs. uniprot
Match: A0A6H5K975_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K975_9PHAE)

HSP 1 Score: 228 bits (580), Expect = 1.210e-66
Identity = 130/318 (40.88%), Postives = 188/318 (59.12%), Query Frame = 1
Query:   19 HSAWSNTKGSNSKTKKPCSTCEVTQEELSDHQYNIGANLRTQDGIDDSLLYVKAGDTAADQARRSRERGVVVPDVDNPLKKLVFDRVRGIGVDILHQDSLNKAKRMIRFLLNALNTDGSALVSGRLKLRSIIPPNAEPLGDVTTDGGFSALTGNQIWVLSSILPLLFRPIFANHMSMKAYVKVADIAAVAQRKGISNCGSVAGLKNVCGAFLDLITACSASSFMVRAKSFTEAELEILLECERDQVEQAFCVMGEALGTFHKGMHIPDNIRDLGAVSNTNPAESKHKQHKKGSASSSGRDNMKHIWRTYNDGVALKAL 972
            HS W+N K  N+KT++ C  C V + +L + +Y+I                        D+ + SR  GVVVP   NPL ++ FDRV G G+DILHQ +LN  K+++ F+++AL+  GS +V                  D+T+ GG SALTG Q+W++SSI+P L  PIF++  ++  YV+   +  VA R  +   G+ AG   VC AF DL+ ACS S F+VR+ SFT   L +L + +++QV+QA  V+G ALGT HKG+HI  N+   G V+N N  E+K+K+ K  + S+SGRDN +HIWR  ND +A+KAL
Sbjct:    2 HSLWANQKHHNAKTERACQACVVPRRDLGNPKYDI-----------------------KDREKLSRALGVVVPRYPNPLDEVAFDRVEGCGMDILHQSALNSGKKIMGFVMDALDPAGSEIVP-----------------DITSAGGRSALTGQQLWLVSSIVPFLLAPIFSSPDNLGRYVRTMVVTEVADRISVEP-GTPAGKAAVCNAFQDLVKACSWSCFVVRSPSFTAEGLHVLQKSQQEQVKQATRVIGVALGTIHKGLHITRNVVVNGVVTNCNVGEAKNKELKASAPSASGRDNARHIWRATNDSLAIKAL 278          
BLAST of mRNA_P-littoralis_Contig66.6.2 vs. uniprot
Match: D7FSA9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FSA9_ECTSI)

HSP 1 Score: 191 bits (484), Expect = 3.620e-55
Identity = 105/227 (46.26%), Postives = 150/227 (66.08%), Query Frame = 1
Query:  298 ILHQDSLNKAKRMIRFLLNALNTDGSALVSGRLKLRSIIPPNAEPLGDVTTDGGFSALTGNQIWVLSSILPLLFRPIFANHMSMKAYVKVADIAAVAQRKGISNCGSVAGLKNVCGAFLDLITACSASSFMVRAKSFTEAELEILLECERDQVE--QAFCVMGEALGTFHKGMHIPDNIRDLGAVSNTNPAESKHKQHKKGSASSSGRDNMKHIWRTYNDGVALKAL 972
            +L Q +LN  K+++ F+L+AL++  S +V GR   R ++P N  P+ D+T+ GG++ALTG Q+W++SSI P L  PIF++   +  YV+   +A VA R  + N G+ AG   VC AF DLI ACS SSF+VR+ SFT   L  L + + DQV+  Q   VMG ALG+ HKG+HI  N+   G V+N N  E+K+KQ K  + S+SGRDN +H+WRT ND +A++AL
Sbjct:    4 LLTQSALNAGKKIMTFVLDALDSAVSEIVRGRFAWRRMLPQNVLPMADITSAGGWAALTGQQLWLVSSIFPFLVAPIFSHPNLLDDYVRAMVVAEVADRIDV-NSGTPAGKAAVCAAFQDLIKACSWSSFVVRSPSFTAEGLGTLQKSQIDQVQVKQVTRVMGVALGSIHKGLHIAPNVVVNGVVTNCNVGEAKNKQQKASAPSASGRDNAEHMWRTTNDSLAMQAL 229          
BLAST of mRNA_P-littoralis_Contig66.6.2 vs. uniprot
Match: A0A6H5KR91_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KR91_9PHAE)

HSP 1 Score: 148 bits (374), Expect = 1.850e-38
Identity = 86/225 (38.22%), Postives = 128/225 (56.89%), Query Frame = 1
Query:  298 ILHQDSLNKAKRMIRFLLNALNTDGSALVSGRLKLRSIIPPNAEPLGDVTTDGGFSALTGNQIWVLSSILPLLFRPIFANHMSMKAYVKVADIAAVAQRKGISNCGSVAGLKNVCGAFLDLITACSASSFMVRAKSFTEAELEILLECERDQVEQAFCVMGEALGTFHKGMHIPDNIRDLGAVSNTNPAESKHKQHKKGSASSSGRDNMKHIWRTYNDGVALKAL 972
            +L Q +LN  K+++ FL++A +  GS +V  R   R ++PPN  P+ D+T                  I P L  PIF++  ++  YV+   +  VA R  +    + AG + VC  F  L+ ACS S F VR++S T     +L + +++QV+QA  V+G ALGT HKG+HI  N+   G V+N N  E+K+K+ K  + S+SGRDN +HIWR  ND  A+KAL
Sbjct:    3 LLTQSALNSDKKIVGFLMDARDPAGSEIVRARFAWRRMLPPNVSPIADIT-----------------HIFPFLLAPIFSSPDNLGRYVRTMVVTEVADRISVEP-DTPAGKEAVCNTFQYLVKACSWSCFEVRSQSLTAEGFHVLQQSQQEQVKQATRVIGVALGTIHKGLHIARNVVVNGDVTNCNVEEAKNKELKASAPSASGRDNARHIWRATNDSFAIKAL 209          
BLAST of mRNA_P-littoralis_Contig66.6.2 vs. uniprot
Match: A0A6H5JWC7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWC7_9PHAE)

HSP 1 Score: 147 bits (371), Expect = 2.630e-36
Identity = 88/225 (39.11%), Postives = 130/225 (57.78%), Query Frame = 1
Query:  298 ILHQDSLNKAKRMIRFLLNALNTDGSALVSGRLKLRSIIPPNAEPLGDVTTDGGFSALTGNQIWVLSSILPLLFRPIFANHMSMKAYVKVADIAAVAQRKGISNCGSVAGLKNVCGAFLDLITACSASSFMVRAKSFTEAELEILLECERDQVEQAFCVMGEALGTFHKGMHIPDNIRDLGAVSNTNPAESKHKQHKKGSASSSGRDNMKHIWRTYNDGVALKAL 972
            +L Q +LN  K+++ F+++AL+  GS +V  R                    GG SALT  Q+W++ SI P L  PIF++  ++  YV+      VA R  +    + AG   VC AF DL+ ACS S F+VR+ SFT   L +L   +++QV+QA  V+  ALGT HKG+ I  N+   G V+N N  E+K+K+ K  + S+SGR+N +HIWR  ND +A+K+L
Sbjct:    3 LLTQSALNSGKKIMGFVMDALDPAGSEIVRARA-------------------GGGSALTSQQLWLVPSIFPFLLAPIFSSPDNLGRYVRAMVAMEVADRISVEPV-TPAGKAAVCNAFQDLVKACSWSCFVVRSPSFTAEGLHVLQNSQQEQVKQATRVIRVALGTIHKGLDIARNLVVNGVVTNCNVGEAKNKELKASAPSASGRNNARHIWRATNDSLAIKSL 207          
BLAST of mRNA_P-littoralis_Contig66.6.2 vs. uniprot
Match: D7FWW6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FWW6_ECTSI)

HSP 1 Score: 140 bits (354), Expect = 1.760e-33
Identity = 94/303 (31.02%), Postives = 156/303 (51.49%), Query Frame = 1
Query:   82 EVTQEELSDHQYNIGANLRTQDGIDDSLLYVKAGDTAADQARRSRERGVVVPDVDNPLKKLV-FDRVRGIGVDILHQDSLNKAKRMIRFLLNALN-TDGSALVSGRLKLRSIIPPNAEPLGDVTTDGGFSALTGNQIWVLSSILPLLFRPIFANHMSMKAYVKVADIAAVAQRKGISNCGSVAGLKNVCGAFLDLITACSASSFMVRAKSFTEAELEILLECERDQVEQAFCVMGEALG----TFHKGMHIPDNIRDLGAVSNTNPAESKHKQHKKGSASSSGRDNMKHIWRTYNDGVALKAL 972
            +  +E+L+D  Y+I  N RT D  + +L  +    T   +   S + GV   +V+NP +K V  + VR  G+D+ HQD+ N   ++ + LL  L+   G  L+S   K  S+      PL D  +DGGFSAL+G  +W LSS+  L+FRP+  +  SMK          +    G +   +V     V      L+ A S ++ ++R+ SF +  +  +   +R++V     ++G+  G    + H+G+H   N  D G +S+ +  ES+HK  K  + ++SGRDN +HI R  ND +A +A+
Sbjct:  509 DKVEEDLADGNYDIVRNRRTDDQTEYALKVISTATTGTQRQALSSKHGVTPQEVENPFRKHVHLNMVRTFGIDVFHQDAQNSLLKIFKRLLGGLSKAKGVPLLSCLAKDPSLRVAGTPPLRDFVSDGGFSALSGMDVWRLSSVALLVFRPVLRSVASMKRLTTAPFRNDIRAELGATT-DTVVTDTEVMEKLRALLLASSKATHLLRSSSFNDETVASIDRLQREKVS-LMSMLGDKHGGRLCSNHQGLHFAKNATDYGELSDCHAGESRHKSFKSCAKTASGRDNEEHIVRRENDAMAAEAM 809          
BLAST of mRNA_P-littoralis_Contig66.6.2 vs. uniprot
Match: D8LJH2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJH2_ECTSI)

HSP 1 Score: 118 bits (295), Expect = 9.810e-26
Identity = 79/264 (29.92%), Postives = 128/264 (48.48%), Query Frame = 1
Query:    7 DTPYHSAWSNTKGSNSKTKKPCSTCEVTQEELSDHQYNIGANLRTQDGIDDSLLYVKAGDTAADQARRSRERGVVVPDVDNPLKKLV-FDRVRGIGVDILHQDSLNKAKRMIRFLLNALN-TDGSALVSGRLKLRSIIPPNAEPLGDVTTDGGFSALTGNQIWVLSSILPLLFRPIFANHMSMKAYVKVADIAAVAQRKGISNCGSVAGLKNVCGAFLDLITACSASSFMVRAKSFTEAELEILLECERDQVEQAFCVMGEALG 792
            D+P        K   +KT  PC  C + QE+L+D  Y+I  N RT D  + +L  +    T   +   S + GV   +V+NP +K V  + VR  G+D+ HQD+ N  +++ + LL  L+   G  L+S   K  S+      PL D  +DGGFSAL+G  +W LSS+  L+FRP+  +  SMK          +    G +   +V     V      L+ A S ++ ++R+ SF +  +  +   +R++  Q+    G+  G
Sbjct:  192 DSPERQLLLGMKRVTNKTLMPCHVCPIGQEDLADGNYDIVRNRRTDDQTEYALKVISTAPTGTQRQALSSKHGVTPQEVENPFRKHVHLNMVRTFGIDLFHQDAQNSLRKIFKRLLGGLSKAKGVPLLSCLAKDPSLRVAGTPPLRDFVSDGGFSALSGMDVWTLSSVALLVFRPVLRSVASMKRLTTAPFRNDIRAELGATT-DTVVTDTEVMEKLRALLLASSEATHLLRSSSFNDETVASIDRSQREKTLQSSIFPGDQRG 454          
BLAST of mRNA_P-littoralis_Contig66.6.2 vs. uniprot
Match: A0A6H5JE27_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JE27_9PHAE)

HSP 1 Score: 101 bits (252), Expect = 3.240e-20
Identity = 50/106 (47.17%), Postives = 69/106 (65.09%), Query Frame = 1
Query:    1 MLDTPYHSAWSNTKGSNSKTKKPCSTCEVTQEELSDHQYNIGANLRTQDGIDDSLLYVKAGDTAADQARRSRERGVVVPDVDNPLKKLVFDRVRGIGVDILHQDSL 318
            +LD+P HS  +NTK +N  T + C  C+V +  L + +Y+I  N RT +G+D  + YVK G T  ++  R+++RGVVVP V NPLKKL FDR   +  DILH DSL
Sbjct:  463 ILDSPEHSDRTNTKNANGCTLRSCQRCKVPRRHLGNPRYDIRQNRRTAEGVDADIEYVKQGATKTERVERAKQRGVVVPKVSNPLKKLTFDRQLQVPFDILHADSL 568          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig66.6.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 14
Match NameE-valueIdentityDescription
D7FWW9_ECTSI1.550e-8544.89Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7G4Y8_ECTSI2.420e-7446.24Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7FZI4_ECTSI1.880e-7345.45Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5K975_9PHAE1.210e-6640.88Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FSA9_ECTSI3.620e-5546.26Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KR91_9PHAE1.850e-3838.22Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JWC7_9PHAE2.630e-3639.11Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FWW6_ECTSI1.760e-3331.02Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D8LJH2_ECTSI9.810e-2629.92Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JE27_9PHAE3.240e-2047.17Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig66contigP-littoralis_Contig66:8448..11204 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Model size975
Hectar predicted targeting categoryother localisation
Exons5
Cds size975
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791374.1189163-CDS-P-littoralis_Contig66:8447..87651680791374.1189163-CDS-P-littoralis_Contig66:8447..8765Pylaiella littoralis U1_48CDSP-littoralis_Contig66 8448..8765 +
1680791374.141969-CDS-P-littoralis_Contig66:9011..92421680791374.141969-CDS-P-littoralis_Contig66:9011..9242Pylaiella littoralis U1_48CDSP-littoralis_Contig66 9012..9242 +
1680791374.1534743-CDS-P-littoralis_Contig66:9708..99121680791374.1534743-CDS-P-littoralis_Contig66:9708..9912Pylaiella littoralis U1_48CDSP-littoralis_Contig66 9709..9912 +
1680791374.163292-CDS-P-littoralis_Contig66:10504..105891680791374.163292-CDS-P-littoralis_Contig66:10504..10589Pylaiella littoralis U1_48CDSP-littoralis_Contig66 10505..10589 +
1680791374.182019-CDS-P-littoralis_Contig66:11067..112041680791374.182019-CDS-P-littoralis_Contig66:11067..11204Pylaiella littoralis U1_48CDSP-littoralis_Contig66 11068..11204 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig66.6.2prot_P-littoralis_Contig66.6.2Pylaiella littoralis U1_48polypeptideP-littoralis_Contig66 8448..11204 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig66.6.2

>prot_P-littoralis_Contig66.6.2 ID=prot_P-littoralis_Contig66.6.2|Name=mRNA_P-littoralis_Contig66.6.2|organism=Pylaiella littoralis U1_48|type=polypeptide|length=325bp
MLDTPYHSAWSNTKGSNSKTKKPCSTCEVTQEELSDHQYNIGANLRTQDG
IDDSLLYVKAGDTAADQARRSRERGVVVPDVDNPLKKLVFDRVRGIGVDI
LHQDSLNKAKRMIRFLLNALNTDGSALVSGRLKLRSIIPPNAEPLGDVTT
DGGFSALTGNQIWVLSSILPLLFRPIFANHMSMKAYVKVADIAAVAQRKG
ISNCGSVAGLKNVCGAFLDLITACSASSFMVRAKSFTEAELEILLECERD
QVEQAFCVMGEALGTFHKGMHIPDNIRDLGAVSNTNPAESKHKQHKKGSA
SSSGRDNMKHIWRTYNDGVALKALC
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mRNA from alignment at P-littoralis_Contig66:8448..11204+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig66.6.2 ID=mRNA_P-littoralis_Contig66.6.2|Name=mRNA_P-littoralis_Contig66.6.2|organism=Pylaiella littoralis U1_48|type=mRNA|length=2757bp|location=Sequence derived from alignment at P-littoralis_Contig66:8448..11204+ (Pylaiella littoralis U1_48)
ATGCTCGACACCCCTTATCACAGTGCGTGGTCCAACACGAAGGGCTCAAA CTCCAAAACCAAGAAGCCGTGTTCGACGTGCGAGGTCACCCAGGAGGAGC TCTCTGACCACCAGTACAACATCGGCGCCAACCTTCGCACGCAGGATGGC ATCGACGACTCTCTGTTGTACGTCAAAGCCGGGGACACAGCCGCGGACCA GGCTCGCCGATCTCGTGAGAGAGGGGTAGTGGTTCCGGACGTGGATAACC CGCTGAAGAAGCTGGTGTTCGACCGAGTTCGGGGCATCGGAGTTGACATA CTGCACCAAGACTCCCTTGTAAGTGAAGACGTATTTTAACACTCAATATT GCGGTGACAACTTCAACAGGCGCATGTTTTTGCTTGGTGGACTTCAAAGT ACCTGATTCCGACTCTGATTCGTGGTGGTGATGTGTGATGTGTGATGTTT GTAGTTTTCCTCGTCAGCACGGCTCGGCACCATAAATTTTATGCGACCGG TGACTTCACTGACCATGGTCTCCTTTCCCATTTGTTTTCCCGCCCAACCA CCATTGGTTTCAAGAACAAGGCAAAGCGCATGATACGCTTCTTGCTGAAT GCACTCAACACCGACGGATCGGCGCTCGTTTCCGGGCGGTTGAAGCTGCG CTCGATAATACCACCAAACGCGGAGCCGCTGGGAGATGTCACAACAGACG GCGGTTTTTCTGCCTTGACTGGAAACCAGATCTGGGTGTTGAGCAGCATT CTGCCTCTGCTTTTCAGGCCTATTTTCGCCAACCACATGTCCATGGTAAG CAAATAATCCGTCGATTTTTTGGGCTTCAGGTCAACGCCCAAGTTTCTTA CACCCTTTGTATTTTACTATACCTTTTGAGTTTCTTCCGGGGGGGGGGGG GGGAGGCGATATTGACGACGTGAAGCTGGGGGGGGGAGGTGGCGGAGGGG GAGGAGGCGGTATTGACGACGTGAAGCTCGGGGACATATTATGTATTCAG CGCAATGCCTACCAATGGTCGGCGTTGTTTGTTCTTTTTTTTTGCACACA CAGCATGATTCTATTGAGTGTACAAAATGTATTCGCTTTCCCGGGCTGCC CGATATTTTTTTACCCGCCCCCTCCCTCTCGAGTTTCAACGCAGTATCAC GTTCTTCATGGGGCAACTCAAGAGACGATATTCAACAATCACATCCCGTG AAGTTCATGCGCCTCTCTGTTATCCCTCCAAACCCCCCCCCGGTACCCTC CGCGACTGCAGAAGGCCTACGTAAAAGTGGCCGACATCGCGGCGGTGGCT CAGCGTAAGGGGATATCAAATTGTGGCAGCGTGGCTGGTCTAAAGAACGT ATGCGGAGCGTTCTTGGACTTGATCACGGCCTGTAGTGCGAGCTCATTCA TGGTGCGGGCTAAATCGTTCACGGAAGCTGAGCTAGAGATTCTGCTGGAA TGCGAGAGGGATCAGGTTAGAAAATAAATGTACAGGGTGTGGCCGCGGGT TATGGTTATCGAAGGTTGACGAGAGGATTTTTTTGTTTTTGGCCTGGAAG TATTCTCAGTCGTGGCAATCAGAGTAACGTTTGTTCCCACCGCGGTGTTG CAACCAGGCCCGCCTCCCGCCGCTCGGAAACACGATGTATACCCACCTCT TACTTGCTCCAAACACGATACGATGCATAGCTTGTGGTCACCCTCTTTGG TTATGCTCATGCGCGAGTTGTCACCCCCGGCAAAAACCGTAGATAAAAAA AAAATTGCGTTTTTTCAAGAGTCGGAGAAAAATCCGGCAGTAAGCTTCTC CCTGCTCTCAGCAAAATCCTTCAGTGTATCCCCTGGACCTCTAACTCCCG TAGTCCTTTTCTCTGTCGTCGATGTGGGCCAAATGGTTGTTCAGTGGGAA ATTGGCACCGCATAATAAATCATTGCGTCCATTGTATCCCAGCAATATGG TTTGTGGTACCACTCGGGACCAACCCCGTATTCTCGCTCACAACATGTTA TTTTTAGGACAACACGAGCCAACGCTGCGACGGCATACTCTCTTCATGGT GCTATAGGTGGAGCAGGCATTTTGCGTGATGGGAGAAGCCCTAGGCACCT TCCACAAGGGAATGCACATTCCGGACAACATTCGGGATCTAGGTAGGTCG CATTGTCCCACACAGATATTTTAGGGGTTCCAGGCGACGTTATTTCAGTA ATTGCAGGCCCGCGTAATTTGTGGCTGTGCTACTATTCAGCCTCGTATTA GAGACCAACTGGTATTTCACAGCAAGTAGGCACCATAGGCCAATTGACCC CCCCCCCGGAGCAATGTAGGATACGCTTTTTCACAGAAATAGCACTCTCG CTCCTAGAGGTGGCCCGGGGTTCTCTTTATTTTGTTCGAAGGTGTCACCG GAGCTGGGATGCAAATATCCCAATCCGCTACAACCATTGTAGAGTATGTT TGGAACGGCCAAGGTACTCGTGATTTCATTAGTATTTTTGGTGCGTTACG CTGCATTTTCGCACTGACCCTCCAAAACCCAAACATTTCGTTCCTGTATT TTTTTCAGGTCTTCTTTAATTTTGTTCTAACTTTGTGTGCTCTACCGCCG ACTATTATTCTCAATGCCAGGTGCCGTGTCGAACACCAACCCAGCCGAAT CTAAGCACAAGCAACACAAGAAAGGGTCGGCATCATCTAGCGGCCGGGAC AACATGAAGCACATATGGAGAACGTACAACGATGGCGTCGCGCTGAAGGC GCTGTGC
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Coding sequence (CDS) from alignment at P-littoralis_Contig66:8448..11204+

>mRNA_P-littoralis_Contig66.6.2 ID=mRNA_P-littoralis_Contig66.6.2|Name=mRNA_P-littoralis_Contig66.6.2|organism=Pylaiella littoralis U1_48|type=CDS|length=975bp|location=Sequence derived from alignment at P-littoralis_Contig66:8448..11204+ (Pylaiella littoralis U1_48)
ATGCTCGACACCCCTTATCACAGTGCGTGGTCCAACACGAAGGGCTCAAA
CTCCAAAACCAAGAAGCCGTGTTCGACGTGCGAGGTCACCCAGGAGGAGC
TCTCTGACCACCAGTACAACATCGGCGCCAACCTTCGCACGCAGGATGGC
ATCGACGACTCTCTGTTGTACGTCAAAGCCGGGGACACAGCCGCGGACCA
GGCTCGCCGATCTCGTGAGAGAGGGGTAGTGGTTCCGGACGTGGATAACC
CGCTGAAGAAGCTGGTGTTCGACCGAGTTCGGGGCATCGGAGTTGACATA
CTGCACCAAGACTCCCTTAACAAGGCAAAGCGCATGATACGCTTCTTGCT
GAATGCACTCAACACCGACGGATCGGCGCTCGTTTCCGGGCGGTTGAAGC
TGCGCTCGATAATACCACCAAACGCGGAGCCGCTGGGAGATGTCACAACA
GACGGCGGTTTTTCTGCCTTGACTGGAAACCAGATCTGGGTGTTGAGCAG
CATTCTGCCTCTGCTTTTCAGGCCTATTTTCGCCAACCACATGTCCATGA
AGGCCTACGTAAAAGTGGCCGACATCGCGGCGGTGGCTCAGCGTAAGGGG
ATATCAAATTGTGGCAGCGTGGCTGGTCTAAAGAACGTATGCGGAGCGTT
CTTGGACTTGATCACGGCCTGTAGTGCGAGCTCATTCATGGTGCGGGCTA
AATCGTTCACGGAAGCTGAGCTAGAGATTCTGCTGGAATGCGAGAGGGAT
CAGGTGGAGCAGGCATTTTGCGTGATGGGAGAAGCCCTAGGCACCTTCCA
CAAGGGAATGCACATTCCGGACAACATTCGGGATCTAGGTGCCGTGTCGA
ACACCAACCCAGCCGAATCTAAGCACAAGCAACACAAGAAAGGGTCGGCA
TCATCTAGCGGCCGGGACAACATGAAGCACATATGGAGAACGTACAACGA
TGGCGTCGCGCTGAAGGCGCTGTGC
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