mRNA_P-littoralis_Contig66.211.1 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig66.211.1
Unique NamemRNA_P-littoralis_Contig66.211.1
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
BLAST of mRNA_P-littoralis_Contig66.211.1 vs. uniprot
Match: A0A6H5KSI7_9PHAE (DDE Tnp4 domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSI7_9PHAE)

HSP 1 Score: 451 bits (1161), Expect = 4.490e-156
Identity = 220/330 (66.67%), Postives = 259/330 (78.48%), Query Frame = 1
Query:   13 PRAKRTRCIKERKNWKQSAWWTQLQEEELAVPTSDAAKVFRERFRVPHAFFLRLVELSREKKWFSDGGADAAGREGIPVELKILTALQILGRGNCFDDINQLSLMSKSMAAATFHKFCKNFAKEMFEEHIYLPTGTYQDEVMDCYRKLGFTGAIGSTDVTHVGWGMCPFTLGRSFTGKEGFPTLAFEVTVDHAGRAIGVTQGFTGATNDKTIVRYDAAVQTIRNNKVYKDREYKLRKADGTEFTRKGCYLIVDNGYHEWVTLMAPSKYPGDVDDAAFSKMLESVRKDVECFFGILKGRFRILKLRLAYHCREDIDNIFFTCCILHNMLHS 1002
            P+ KRTR + +R++W+ SAWW +LQ+ +LA  T+ AAKVFRERFRVP+ FF  LV+LSR K+WFS G  DAA REGIP+ELK+L      G+GNCFDD+ QLS MS+S+A A FHKFC++ A EMF+EHIYLPTGTY DEVM  + +LG TGA GSTDVTH+G  MCPFTLGRSFTGKEGFPT+A+EVTVDHAGRA+ VT GF G TNDKT +RYD+ V  IR    Y +REYKLRK +GTE TR+GC+LIVDNGY+E              +D AFS+ LESVRKDVECFFGILKGRFRILKLR+ YH RE IDNIFFTCCILHNMLH+
Sbjct:   57 PKVKRTRRVTQRRDWRTSAWWEKLQDVDLADHTTAAAKVFRERFRVPYPFFQELVKLSRAKRWFSPGEKDAANREGIPLELKVL------GKGNCFDDVEQLSKMSESIAQALFHKFCRHSAAEMFDEHIYLPTGTYLDEVMGIFHQLGCTGACGSTDVTHIGRNMCPFTLGRSFTGKEGFPTIAYEVTVDHAGRALAVTNGFAGGTNDKTTIRYDSGVNKIRTESQYTEREYKLRKVNGTERTRRGCFLIVDNGYYE------------SNEDTAFSRHLESVRKDVECFFGILKGRFRILKLRMPYHKREYIDNIFFTCCILHNMLHT 368          
BLAST of mRNA_P-littoralis_Contig66.211.1 vs. uniprot
Match: A0A6H5JAU4_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JAU4_9PHAE)

HSP 1 Score: 450 bits (1157), Expect = 8.760e-154
Identity = 212/351 (60.40%), Postives = 269/351 (76.64%), Query Frame = 1
Query:   31 RCIKERKNWKQSAWWTQLQE-EELAV-----PTSDAAKVFRERFRVPHAFFLRLVELSREKKWFSDGGADAAGREGIPVELKILTALQILGRGNCFDDINQLSLMSKSMAAATFHKFCKNFAKEMFEEHIYLPTGTYQDEVMDCYRKLGFTGAIGSTDVTHVGWGMCPFTLGRSFTGKEGFPTLAFEVTVDHAGRAIGVTQGFTGATNDKTIVRYDAAVQTIRNNKVYKDREYKLRKADGTEFTRKGCYLIVDNGYHEWVTLMAPSKYPGDVDDAAFSKMLESVRKDVECFFGILKGRFRILKLRLAYHCREDIDNIFFTCCILHNMLHSFDGMSVFKENVDWAGSAGLHD 1065
            R +  RK++  S W  QLQE ++L V     PTS  A+ FRE FR+P+ FF+ LV L +++ WF  G  DA+GR GIPV+LK+L  LQIL RGNCF DI  +S +S   AAATFH+F + FA+EM+ EHI+LPTG YQ +VM  Y +LGF+GA GSTDVTH+ WGMCP+   RS+TGKEG+PT+A++VTVDH  R + VT GFTG+TNDK+I+RYD AV  IR + +Y ++E+ + +ADGT +  KGCYL+VDNGYH+WVTL+ PSKYP D +D AFSK LESVRKDVECFFGI+KGRFRILKL + YH +EDIDN+FFTCCILHNMLHS+D  S  +E  +WAG+AGLH+
Sbjct:   77 RRVYPRKDYNISGWAIQLQELKDLEVDGIVDPTSRPARRFRESFRLPYPFFVELVALVKQRDWFPTGKQDASGRRGIPVQLKVLACLQILARGNCFADIYHMSFISMQTAAATFHRFTRYFAREMYAEHIFLPTGDYQKKVMTQYDRLGFSGATGSTDVTHIPWGMCPYNQARSYTGKEGYPTVAYQVTVDHTKRVLAVTPGFTGSTNDKSIIRYDTAVTKIREDPIYSEKEFTVYEADGTPYQLKGCYLLVDNGYHKWVTLIPPSKYPIDQNDLAFSKRLESVRKDVECFFGIVKGRFRILKLSIPYHKQEDIDNVFFTCCILHNMLHSYDNKSEMEEEPNWAGNAGLHN 427          
BLAST of mRNA_P-littoralis_Contig66.211.1 vs. uniprot
Match: A0A6H5JPH7_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPH7_9PHAE)

HSP 1 Score: 428 bits (1100), Expect = 6.220e-145
Identity = 203/358 (56.70%), Postives = 257/358 (71.79%), Query Frame = 1
Query:    1 DDDVPRAKRTRCIKERKNWKQSAWWTQLQEEELAVPTSDA---AKVFRERFRVPHAFFLRLVELSREKKWFSDGGADAAGREGIPVELKILTALQILGRGNCFDDINQLSLMSKSMAAATFHKFCKNFAKEMFEEHIYLPTGTYQDEVMDCYRKLGFTGAIGSTDVTHVGWGMCPFTLGRSFTGKEGFPTLAFEVTVDHAGRAIGVTQGFTGATNDKTIVRYDAAVQTIRNNKVYKDREYKLRKADGTEFTRKGCYLIVDNGYHEWVTLMAPSKYPGDVDDAAFSKMLESVRKDVECFFGILKGRFRILKLRLAYHCREDIDNIFFTCCILHNMLHSFDGMSVFKENVDWAGSAGLHD 1065
            DD+  R  + R +  RK++ +S WW +L E      T      A+ FR  FRVP+ FF+ LVEL R++ WF  G +D  GR+ +PVELK+L  LQIL RGN F DI  +S +S    A+TFH+FCK FA E+++E++YLPTG    +VM+ Y ++GF GA+GSTDVTH+ WGMCP+   R +TGKEG PT+AF+VTVDH+GR + VT+GFTGATNDKTI+RYD AV  IR + VY +++YKL   DG +F  KGCYL+VDNGYH+W TL+ PSK P D  D  FSK LES RKDVEC+FGILKGRFRI KL + +H +E IDN+FFTCCILHNMLHSFD      E  +WAGSAGLH+
Sbjct:   86 DDEASREVKRRRVYVRKDYTKSGWWQELMELRETGETDHTTREARRFRNNFRVPYPFFVHLVELVRDRDWFPTGESDVTGRQAVPVELKVLACLQILSRGNVFADIYHMSFISFQTVASTFHRFCKYFAAELYDEYVYLPTGEDLRKVMEQYDRIGFPGAVGSTDVTHIYWGMCPYNQARIYTGKEGKPTVAFQVTVDHSGRVLAVTRGFTGATNDKTIIRYDKAVTRIRTDPVYTEQKYKLYAQDGQQFEEKGCYLLVDNGYHKWRTLIPPSKCPIDRGDLIFSKRLESARKDVECYFGILKGRFRINKLAIGFHKQEYIDNVFFTCCILHNMLHSFDNRGDMSEEPNWAGSAGLHN 443          
BLAST of mRNA_P-littoralis_Contig66.211.1 vs. uniprot
Match: A0A6H5K796_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K796_9PHAE)

HSP 1 Score: 407 bits (1046), Expect = 1.260e-138
Identity = 189/264 (71.59%), Postives = 218/264 (82.58%), Query Frame = 1
Query:  274 QILGRGNCFDDINQLSLMSKSMAAATFHKFCKNFAKEMFEEHIYLPTGTYQDEVMDCYRKLGFTGAIGSTDVTHVGWGMCPFTLGRSFTGKEGFPTLAFEVTVDHAGRAIGVTQGFTGATNDKTIVRYDAAVQTIRNNKVYKDREYKLRKADGTEFTRKGCYLIVDNGYHEWVTLMAPSKYPGDVDDAAFSKMLESVRKDVECFFGILKGRFRILKLRLAYHCREDIDNIFFTCCILHNMLHSFDGMSVFKENVDWAGSAGLHD 1065
            Q+LG+GNCFDD+ QLS MSKSMA  TFHKFC++FA EMF+EHIYLPTGTY DEVM  + +LG+TGA GSTDVTH+GW MCPFTLGRSFTGKEGFPT+A++VTVDH GR + VT GFTGATNDKTI+RYD+ V  IR    Y +REYKLRKA+GT+  R+GC+LIVDNGYHEWVTL+APSKYP   +D AFS+ LESVRKDV CF        RILKLR+ YH RE +DNIFFTCCILHNMLH+FDG+ VF+EN DW GSAG HD
Sbjct:   42 QVLGKGNCFDDVEQLSKMSKSMAQPTFHKFCRHFAAEMFDEHIYLPTGTYLDEVMGIFHQLGWTGACGSTDVTHIGWNMCPFTLGRSFTGKEGFPTIAYDVTVDHDGRDLAVTNGFTGATNDKTIIRYDSGVNKIRTASQYTEREYKLRKANGTKRMRRGCFLIVDNGYHEWVTLIAPSKYPQRNEDTAFSRDLESVRKDVGCF--------RILKLRMPYHKREYVDNIFFTCCILHNMLHTFDGLDVFEENTDWTGSAGHHD 297          
BLAST of mRNA_P-littoralis_Contig66.211.1 vs. uniprot
Match: A0A6H5KEB6_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KEB6_9PHAE)

HSP 1 Score: 415 bits (1066), Expect = 6.370e-138
Identity = 241/508 (47.44%), Postives = 283/508 (55.71%), Query Frame = 1
Query:   13 PRAKRTRCIKERKNWKQSAWWTQLQEEELAVPTSDAAKVFRERFRVPHAFFLRLVELSREKKWFSDGGADAAGREGIPVELKILTAL-----QILGRGN----------CFDD----------------INQLSLMSK-----------SMAAATF---------------------------------HKFCKNFAKEMFEEHIYLPTGTYQDEVMDCYRKLGFTGAIGSTDVTHVGWGMCPFTLGRSFTGKEGFPTLAFEVTVDHAGRAIGVTQGFTGATNDKTIVRYDAAVQTIRNNKVYKDREYKLRKADGTEFTRKGCYLIVDNG----------YHE---------------WVTLMAPSKYPGDVDDAAFSKMLESVRKDVECFFGILKGRFRILKLRLAYH-------------------------------------C--------------------REDIDNIFFTCCILHNMLHSFDGMSVFKENVDWAGSAGLHD 1065
            P+AKRTR + +R++W+ SAWW QLQ  +LA  T+ AA VFR RFRVP+ FF  LV+LSR K+WFS G  D A REGIP+ELK+ T+      Q+ G  N           FD+                 +QL                +M   T                                  HKFC++FA EMF+EHIYL TGTY DEVM  + +LG TGA GST+VTH+GW MCPFTLGRSFTGKEGFPT+A EVTVDHAGRA+ VT GFTGATNDKTI+RYD+ V  IR    Y +REYKLRKA+GTE TR+GC+LIVDNG          +H+               WVTL+APSKYP   +D AFS+ LESVRKDVECFFGILKGRFRILKLR+ YH                                     C                    RE IDNIFFTCCILHNMLH+FDG+ VF+EN DW GSAG HD
Sbjct:   57 PKAKRTRRVTQRRDWRTSAWWEQLQHVDLADHTTAAATVFRGRFRVPYPFFQNLVKLSRAKRWFSPGEKDTANREGIPLELKLRTSTPVEDEQVDGTSNHKFCRHFAAEMFDEHIYLLTGTYLDEVMGIFHQLGCTGACGSTNVTHIGWNMCPFTLGRSFTGKEGFPTIACEVTVDHAGRALAVTNGFTHKFCRHFAAEMFDEHIYLLTGTYLDEVMGIFHQLGCTGACGSTNVTHIGWNMCPFTLGRSFTGKEGFPTIACEVTVDHAGRALAVTNGFTGATNDKTIIRYDSGVNKIRTESQYTEREYKLRKANGTERTRRGCFLIVDNGMSVPKDLCVVHHKNIVAKLPSSERVLIWWVTLIAPSKYPQSNEDTAFSRHLESVRKDVECFFGILKGRFRILKLRMPYHKREYIDNIFFTCCILHNMLHTGGXFSRHLESVRKDVECFFGILKGRFRILKLRMPYHKREYIDNIFFTCCILHNMLHTFDGLDVFEENTDWTGSAGHHD 564          
BLAST of mRNA_P-littoralis_Contig66.211.1 vs. uniprot
Match: A0A6H5JHI0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHI0_9PHAE)

HSP 1 Score: 401 bits (1031), Expect = 5.040e-136
Identity = 195/341 (57.18%), Postives = 244/341 (71.55%), Query Frame = 1
Query:   40 KERKNWKQSAWWTQLQEEELAVPTSDAAKVFRERFRVPHAFFLRLVELSREKKWFSDGGADAAGREGIPVELKILTALQILGRGNCFDDINQLSLMSKSMAAATFHKFCKNFAKEMFEEHIYLPT--GTYQDEVMDCYRKLGFTGAIGSTDVTHVGWGMCPFTLGRSFTGKEGFPTLAFEVTVDHAGRAIGVTQGFTGATNDKTIVRYDAAVQTIRNNKVYKDREYKLRKADGTEFTRKGCYLIVDNGYHEWVTLMAPSKYPGDVDDAAFSKMLESVRKDVECFFGILKGRFRILKLRLAYHCREDIDNIFFTCCILHNMLHSFDGMSVFKENVDWAGSAG 1056
            ++RK  ++ AW   L++++L    S ++K FR  FRVP +FFLRLV L + K WF+  G DAA R+  PVE K+L  L ILGRGNCF  I Q+S MS       FHKFCK+FA+EM++EHIYLP+      D VM  Y +LGF+GA+GS DVTH+GW  CP+ L RS+TGKEG PT+ ++VTV+HAGRAI VT+GFT +TNDKT V +DA V+ IR +  Y ++ + +   DGT  T KGCYL+VDNGYH+W  LM P+KYP   +D  FSK LESVRKDVECFFGILKG FRI K+ +AYH +E IDN+FFTCCILHNMLH+FDGM    EN  W  SAG
Sbjct:   26 RKRKEVEKCAWAQMLEDKDLEDSNSISSKQFRLDFRVPDSFFLRLVALVKSKDWFTTSGCDAARRQSHPVEHKVLAWLTILGRGNCFASIYQVSWMSAKTVQTMFHKFCKHFAREMYDEHIYLPSEQNGELDHVMKQYDRLGFSGAMGSMDVTHIGWSKCPYNLARSYTGKEGVPTVGYQVTVNHAGRAIAVTEGFTDSTNDKTTVCWDAVVEKIRTDNQYTEKTFDVYNEDGTTTTLKGCYLLVDNGYHKWKILMEPTKYPLSENDILFSKRLESVRKDVECFFGILKGCFRIQKVAMAYHEQERIDNVFFTCCILHNMLHTFDGMDQLVENTLWVSSAG 366          
BLAST of mRNA_P-littoralis_Contig66.211.1 vs. uniprot
Match: A0A6H5JBE2_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBE2_9PHAE)

HSP 1 Score: 400 bits (1028), Expect = 1.250e-134
Identity = 197/335 (58.81%), Postives = 240/335 (71.64%), Query Frame = 1
Query:   67 AWWTQLQEEELAVPTSDAAKVFRERFRVPHAFFLRLVELSREKKWFSDGGADAAGREGIPVELKILTALQILGRGNCFDDINQLSLMSKSMAAATFHKFCKNFAKEMFEEHIYLPT--GTYQDEVMDCYRKLGFTGAIGSTDVTHVGWGMCPFTLGRSFTGKEGFPTLAFEVTVDHAGRAIGVTQGFTGATNDKTIVRYDAAVQTIRNNKVYKDREYKLRKADGTEFTRKGCYLIVDNGYHEWVTLMAPSKYPGDVDDAAFSKMLESVRKDVECFFGILKGRFRILKLRLAYHCREDIDNIFFTCCILHNMLHSFDGMSVFKENVDWAGSAGLHD 1065
            AW   L++E+L  PTS AAK FRE FRVP+ FFLRLVEL ++K WF+    DA GR   PVE K+L  L ILGRGN F  I  LS MS       FH+FC++FA EM++EHI+LP+      D VM  Y KLGF GA+GSTDVTH+GW  CP+  GRS+TGKEG PT+ ++VTV+HAGR + VT+GFTG+TNDKTI+  D AV  IR +K Y ++ + + K DGT  T KGCYLIVDNGYH+W  L+ PSKYP    D  FSK LESVRKDVECFFGILK RFRILKL + Y  +E +D +FFTCCILHNMLH+ DGM   +E+V+W GSA L +
Sbjct:   64 AWAQVLEDEDLKDPTSIAAKKFREDFRVPYPFFLRLVELVKKKDWFATTQRDAYGRRCHPVEHKVLACLTILGRGNVFGSIYNLSWMSTPTVQKVFHQFCEHFATEMYDEHIFLPSEENGELDRVMGQYEKLGFPGAMGSTDVTHIGWSRCPYNQGRSYTGKEGKPTVGYQVTVNHAGRVLAVTEGFTGSTNDKTIICCDEAVDRIRTDKQYAEKPFTVHKKDGTTETLKGCYLIVDNGYHKWRMLIEPSKYPLSEADLLFSKRLESVRKDVECFFGILKMRFRILKLAMTYQKQERLDYVFFTCCILHNMLHTHDGMGGLEEDVNWVGSAELQN 398          
BLAST of mRNA_P-littoralis_Contig66.211.1 vs. uniprot
Match: A0A6H5KNX4_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNX4_9PHAE)

HSP 1 Score: 379 bits (972), Expect = 2.160e-126
Identity = 192/356 (53.93%), Postives = 233/356 (65.45%), Query Frame = 1
Query:   82 LQEEELAVPTSDAAKVFRERFRVPHAFFLRLVELSREKKWFSDGGADAAGREGIPVELKILTALQILGRGNCFDDINQLSLMSKSMAAATFHKFCKNFAKEMFEEHIYLPT--GTYQDEVMDCYRKLGFTGAIGSTDVTHVGWGMCPFTLGRSFTGKEGFPTLAFEVTVDHAGRAIGVTQGFTGATNDKTIVRYDAAVQTIRNNKVYK----------------------------DREYKLRKADGTEFTRKGCYLIVDNGYHEWVTLMAPSKYPGDVDDAAFSKMLESVRKDVECFFGILKGRFRILKLRLAYHCREDIDNIFFTCCILHNMLHSFDGMSVFKENVDWAGSAGL 1059
            L++++L   TS  AK  R  FRVP+  FLRLV L + K WFS    DA G    PVE K+L  L ILGRGNCF  I Q+S MS       FHKFC++FA+EM++E I+LPT      D VM  Y +LGFTGA+GS DVTH+ W  CP+   RS+TGKEGFPT+A++VTVDHAGRAI VT+GFTG+TNDKTIV +D AV+ I  +K Y                             ++ + +   DGT  T KGCYL+VDNGYH+W  L+ PSKYP   +D  FSK LESVRKDVECFFGILKGRFRILKL + Y  +E IDN+FFTC ILHNMLH+FDGM    EN +W  SAG+
Sbjct:   27 LEDKDLEDSTSITAKQLRVDFRVPYTVFLRLVALVKSKNWFSTAVTDAVGWASHPVEHKVLAWLTILGRGNCFASIYQMSWMSAKTVQGMFHKFCRHFAREMYDEQIHLPTEESGKLDHVMKQYDRLGFTGAVGSMDVTHIAWSRCPYNQARSYTGKEGFPTIAYQVTVDHAGRAIAVTEGFTGSTNDKTIVCWDTAVEKIWTDKHYTXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKTFDVYNEDGTTTTLKGCYLLVDNGYHKWQILIEPSKYPLSENDLLFSKRLESVRKDVECFFGILKGRFRILKLAMEYQSQERIDNVFFTCYILHNMLHTFDGMDQLVENTNWVSSAGV 382          
BLAST of mRNA_P-littoralis_Contig66.211.1 vs. uniprot
Match: A0A6H5KY50_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KY50_9PHAE)

HSP 1 Score: 362 bits (930), Expect = 1.720e-120
Identity = 167/274 (60.95%), Postives = 207/274 (75.55%), Query Frame = 1
Query:  244 PVELKILTALQILGRGNCFDDINQLSLMSKSMAAATFHKFCKNFAKEMFEEHIYLPTGTYQDEVMDCYRKLGFTGAIGSTDVTHVGWGMCPFTLGRSFTGKEGFPTLAFEVTVDHAGRAIGVTQGFTGATNDKTIVRYDAAVQTIRNNKVYKDREYKLRKADGTEFTRKGCYLIVDNGYHEWVTLMAPSKYPGDVDDAAFSKMLESVRKDVECFFGILKGRFRILKLRLAYHCREDIDNIFFTCCILHNMLHSFDGMSVFKENVDWAGSAGLHD 1065
            P   ++L  LQIL RGN F DI  +S +S    A+TFH+FCK FA E+++E++YLPTG    +VM+ Y ++GF GA+GSTDVTH+ WGMCP+   R +TGKEG PT+AF+VTVDH+GR + VT+GFTGATNDKTI+RYD AV  IR + VY +++YKL   DG +F  KGCYL+VDNGYH+W TL+ PSK P D  D  FSK LES RKDVEC+FGILKGRFRI KL + +H +E IDN+FFTCCILHNMLHSFD      E  +WAGSAGLH+
Sbjct:   79 PPHTQVLACLQILSRGNVFADIYHMSFISFQTVASTFHRFCKYFAAELYDEYVYLPTGEDLRKVMEQYDRIGFPGAVGSTDVTHIYWGMCPYNQARIYTGKEGKPTVAFQVTVDHSGRVLAVTRGFTGATNDKTIIRYDKAVTRIRTDPVYTEQKYKLYAQDGQQFEEKGCYLLVDNGYHKWRTLIPPSKCPIDRGDLIFSKRLESARKDVECYFGILKGRFRINKLAIGFHKQEYIDNVFFTCCILHNMLHSFDNRGDMSEEPNWAGSAGLHN 352          
BLAST of mRNA_P-littoralis_Contig66.211.1 vs. uniprot
Match: A0A6H5JCU6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCU6_9PHAE)

HSP 1 Score: 360 bits (925), Expect = 4.190e-119
Identity = 197/383 (51.44%), Postives = 225/383 (58.75%), Query Frame = 1
Query:    7 DVPRAKRTRCIKERKNWKQSAWWTQLQEEELAVPTSDAAKVFRERFRVPHAFFLRLVELSREKKWFSDGGADAAGREGIPVELK--------------------------------------------------------------------------------------------------------------ILTALQILGRGNCFDDINQLSLMSKSMAAATFHKFCKNFAKEMFEEHIYLPTGTYQDEVMDCYRKLGFTGAIGSTDVTHVGWGMCPFTLGRSFTGKEGFPTLAFEVTVDHAGRAIGVTQGFTGATNDKTIVRYDAAVQTIRNNKVYKDREYKLRKADGTEFTRKGCYLIVDNGYHEWVTLMAPSKYPGD 825
            D P  KR+R +KER++W  SAWW QLQ  +L   T++AAKVFR RFRVPHAFFL LV+++R KKWFS    DA GR GIP+ELK                                                                                                              ILTALQILGRGNCFDDI QLSLMSK MAAATFHKFCK+FA+E+FEEHIYLPTG+YQDEVM  Y KLG TGAIGSTDVTH+GWGMCPFTLGRS+TGKEGFPT+A++VTVDHAGRAI +T GFTGATNDKTI+RYDA V TI+ +  Y  R YKLR+ADGT   RKGCY IVDNGYHE  +L  P++   D
Sbjct:   57 DGPPVKRSRQVKERRDWSTSAWWLQLQNADLLDHTTEAAKVFRTRFRVPHAFFLELVKMARGKKWFSVREKDAVGRRGIPIELKLSSYRSGLLLLVVNCSDVPSIEPMRWIVVHNFTRWYRRVHSSTAVVAEHGSMGNVPCTVTRTSHRWHRKYCCRRPTAREKRRTLWFRLHTFQTRGHLRGHATTFDAASTKILTALQILGRGNCFDDICQLSLMSKPMAAATFHKFCKHFAQELFEEHIYLPTGSYQDEVMCMYDKLGMTGAIGSTDVTHIGWGMCPFTLGRSYTGKEGFPTIAYQVTVDHAGRAIAITSGFTGATNDKTIIRYDAGVHTIKTDAQYTKRTYKLRRADGTFRERKGCYYIVDNGYHEVNSLGHPNRMRED 439          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig66.211.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KSI7_9PHAE4.490e-15666.67DDE Tnp4 domain-containing protein (Fragment) n=1 ... [more]
A0A6H5JAU4_9PHAE8.760e-15460.40Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JPH7_9PHAE6.220e-14556.70Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K796_9PHAE1.260e-13871.59Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KEB6_9PHAE6.370e-13847.44DDE Tnp4 domain-containing protein n=1 Tax=Ectocar... [more]
A0A6H5JHI0_9PHAE5.040e-13657.18Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JBE2_9PHAE1.250e-13458.81Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KNX4_9PHAE2.160e-12653.93DDE Tnp4 domain-containing protein n=1 Tax=Ectocar... [more]
A0A6H5KY50_9PHAE1.720e-12060.95Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JCU6_9PHAE4.190e-11951.44Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig66contigP-littoralis_Contig66:665158..667641 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog2880.D7FSK2
PFAMsPlant_tran
Model size1066
Max annot lvl2759|Eukaryota
Hectar predicted targeting categoryother localisation
Exons3
Evalue7.26e-99
EggNOG OGs2E2RF@1|root,2S9YA@2759|Eukaryota
DescriptionPlant transposon protein
Cds size1065
COG categoryS
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791380.2078302-CDS-P-littoralis_Contig66:665157..6654151680791380.2078302-CDS-P-littoralis_Contig66:665157..665415Pylaiella littoralis U1_48CDSP-littoralis_Contig66 665158..665415 +
1680791380.2187157-CDS-P-littoralis_Contig66:666264..6667921680791380.2187157-CDS-P-littoralis_Contig66:666264..666792Pylaiella littoralis U1_48CDSP-littoralis_Contig66 666265..666792 +
1680791380.228059-CDS-P-littoralis_Contig66:667362..6676411680791380.228059-CDS-P-littoralis_Contig66:667362..667641Pylaiella littoralis U1_48CDSP-littoralis_Contig66 667363..667641 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig66.211.1prot_P-littoralis_Contig66.211.1Pylaiella littoralis U1_48polypeptideP-littoralis_Contig66 665158..667641 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig66.211.1

>prot_P-littoralis_Contig66.211.1 ID=prot_P-littoralis_Contig66.211.1|Name=mRNA_P-littoralis_Contig66.211.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=355bp
DDDVPRAKRTRCIKERKNWKQSAWWTQLQEEELAVPTSDAAKVFRERFRV
PHAFFLRLVELSREKKWFSDGGADAAGREGIPVELKILTALQILGRGNCF
DDINQLSLMSKSMAAATFHKFCKNFAKEMFEEHIYLPTGTYQDEVMDCYR
KLGFTGAIGSTDVTHVGWGMCPFTLGRSFTGKEGFPTLAFEVTVDHAGRA
IGVTQGFTGATNDKTIVRYDAAVQTIRNNKVYKDREYKLRKADGTEFTRK
GCYLIVDNGYHEWVTLMAPSKYPGDVDDAAFSKMLESVRKDVECFFGILK
GRFRILKLRLAYHCREDIDNIFFTCCILHNMLHSFDGMSVFKENVDWAGS
AGLHD
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mRNA from alignment at P-littoralis_Contig66:665158..667641+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig66.211.1 ID=mRNA_P-littoralis_Contig66.211.1|Name=mRNA_P-littoralis_Contig66.211.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=2484bp|location=Sequence derived from alignment at P-littoralis_Contig66:665158..667641+ (Pylaiella littoralis U1_48)
GACGACGACGTGCCGCGTGCGAAGCGGACGAGATGCATCAAGGAGCGAAA GAACTGGAAGCAGTCTGCCTGGTGGACGCAACTTCAGGAGGAAGAACTTG CCGTGCCCACGTCCGATGCGGCGAAGGTATTCCGAGAGCGCTTTCGCGTG CCTCACGCCTTCTTCCTGAGGTTGGTGGAGCTGTCGAGGGAGAAGAAGTG GTTCTCAGACGGAGGAGCGGATGCAGCAGGCCGTGAGGGTATCCCAGTAG AGCTCAAGGTGCGCTTGAAAATGACACTTCGTACGAAGCATAACATACTG GAAAATAATATAGATGGTATGTGTACAAGTACAAAATACAGCAGCTTTCC ACTGCTGTACGTCACACAACTGCTGTCCACACACCGCCGTCCACCTCATG ACTGCAGCACAACTGCTGCACCTGATGAAAGTCTGCATGCCTTTCGGGGC CGGTATATTTGTGAAGCACTTGCAGCTGTAGGGTATGCGAGACCAATCAA GTGCGCAACGATTTTTGTGGGTCGGCACGACGAGGACTAGCGAATGAACT TATTCTGGATAACAAAGTGCCGCAGACGGATATCACCACAGCAGTGTGTG TTGCTGATGCTGCCGAAGATACCGCTGCAGGTTTTTGGGTACTCTTCTGT GCCCCACTCCTGGGTCGGTGGTTATTACGAGGTACTTATATTCCGAACCT TTCTTGATTGGTCGTTTCGGGTCGAGTGGATGCGGAAACACGGGAATGCA ACCATACATGACTGCTGTACTGCTGTAGACTGGCGTGCAGAATAGATGGG ATGGCAACACAACACAACAGTATTTATCACGCTTTCACGTAAAAAAAAAC ATGCCGTTGCTGCGCCACCACGTGACGCTATTCCGACACAACAGCTGTCA CGATGTGTGTATGTGAAAATCAAAACATCATCCGTAATACGAAATCATGT ATCTGCCTGATTCGTATACACGGACAAATTCAAATGGTAGTTGTCCAGCC GAGCGAATCGGGCAACAGCAACTAGTCGACTGATGGACACTCCCGCCCCC CCCCTTTTCTCCCCGCCGCCGCGCGCGCTCCCCCTCCCCCCTGACATTAT TCGACAGATCTTGACGGCCCTCCAGATACTCGGCAGGGGCAACTGCTTCG ACGACATCAACCAGCTGTCGTTAATGAGCAAATCGATGGCGGCAGCAACG TTCCACAAGTTCTGCAAGAACTTCGCGAAGGAGATGTTCGAGGAGCATAT CTACCTTCCAACAGGAACGTACCAAGACGAAGTGATGGACTGCTACCGCA AACTGGGTTTTACTGGAGCAATCGGTTCTACCGACGTCACTCACGTCGGT TGGGGCATGTGTCCGTTCACCCTTGGCCGTTCTTTCACGGGCAAGGAGGG GTTTCCAACCCTGGCGTTCGAGGTTACCGTCGACCACGCGGGCCGCGCCA TTGGCGTCACCCAAGGGTTCACCGGTGCGACCAACGACAAGACGATCGTC CGCTACGACGCAGCCGTACAGACCATCAGGAACAACAAAGTGTACAAGGA TCGAGAGTACAAGCTCAGGAAGGCGGATGGCACGGAGTTCACCCGGAAAG GATGCTATTTGATCGTCGACAACGGCTATCACGAGGTGAGTGTATTGGGG GCGTGGGGAGTATTAGAATATCCGAACGTAGTGCGTGCTCCGTGACGCTT CGGGTTGATGTGAAGCCCGAAAAATACACGCCGGTACACCGAAAGCAGAC CAATGCCATATTTGTCGGTACTGAATGAGGATCTTTATGGCATGTCGGCC CCGTGCATCGGGCGTCGACCTTACGCAGCGGCACACCAAGGTGAAAAACG TTTTGCCGCTTCGCGTTCCTTCTATTTGTAGTTGTTTTCGTGCTGGTTCC GTTTGGACGGTTGCGTTCACTTTCTTACATTTCGAGCATACATCACCCCA TTTATAACACCAAAGGTTTTAACAAACAAATCTGCTCAGGGGTGGTCAGA TGGCAAATATTGTACTTCGAAGTACAAAGTTGTAGGCATCTGTGTTGCCC ACATGTCCACACGGTTCCTCGTTCCCCCCGAGGAGTTTGATCGTGAAAAT ATGTGCGTCGGGGCCTGAGGTTTCCAGAGCCTTTCCGTAGCTCACCAGTC GTCCCTTTCGACCCCCCCCCTGCTACTGTTGTGCCGTCGTGTGCCAAATC AACAGTGGGTCACCCTCATGGCCCCATCGAAGTACCCGGGTGACGTGGAT GACGCGGCCTTCTCCAAGATGCTTGAGAGTGTGCGCAAGGATGTGGAGTG TTTCTTCGGCATTCTGAAAGGGCGCTTCAGAATCCTGAAGCTCCGCCTGG CCTACCACTGCAGGGAAGACATCGATAACATCTTCTTCACGTGCTGCATT CTCCACAACATGCTCCACTCCTTCGACGGCATGAGCGTGTTCAAGGAGAA CGTCGACTGGGCAGGCAGCGCTGGTCTGCACGAC
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Coding sequence (CDS) from alignment at P-littoralis_Contig66:665158..667641+

>mRNA_P-littoralis_Contig66.211.1 ID=mRNA_P-littoralis_Contig66.211.1|Name=mRNA_P-littoralis_Contig66.211.1|organism=Pylaiella littoralis U1_48|type=CDS|length=1065bp|location=Sequence derived from alignment at P-littoralis_Contig66:665158..667641+ (Pylaiella littoralis U1_48)
GACGACGACGTGCCGCGTGCGAAGCGGACGAGATGCATCAAGGAGCGAAA
GAACTGGAAGCAGTCTGCCTGGTGGACGCAACTTCAGGAGGAAGAACTTG
CCGTGCCCACGTCCGATGCGGCGAAGGTATTCCGAGAGCGCTTTCGCGTG
CCTCACGCCTTCTTCCTGAGGTTGGTGGAGCTGTCGAGGGAGAAGAAGTG
GTTCTCAGACGGAGGAGCGGATGCAGCAGGCCGTGAGGGTATCCCAGTAG
AGCTCAAGATCTTGACGGCCCTCCAGATACTCGGCAGGGGCAACTGCTTC
GACGACATCAACCAGCTGTCGTTAATGAGCAAATCGATGGCGGCAGCAAC
GTTCCACAAGTTCTGCAAGAACTTCGCGAAGGAGATGTTCGAGGAGCATA
TCTACCTTCCAACAGGAACGTACCAAGACGAAGTGATGGACTGCTACCGC
AAACTGGGTTTTACTGGAGCAATCGGTTCTACCGACGTCACTCACGTCGG
TTGGGGCATGTGTCCGTTCACCCTTGGCCGTTCTTTCACGGGCAAGGAGG
GGTTTCCAACCCTGGCGTTCGAGGTTACCGTCGACCACGCGGGCCGCGCC
ATTGGCGTCACCCAAGGGTTCACCGGTGCGACCAACGACAAGACGATCGT
CCGCTACGACGCAGCCGTACAGACCATCAGGAACAACAAAGTGTACAAGG
ATCGAGAGTACAAGCTCAGGAAGGCGGATGGCACGGAGTTCACCCGGAAA
GGATGCTATTTGATCGTCGACAACGGCTATCACGAGTGGGTCACCCTCAT
GGCCCCATCGAAGTACCCGGGTGACGTGGATGACGCGGCCTTCTCCAAGA
TGCTTGAGAGTGTGCGCAAGGATGTGGAGTGTTTCTTCGGCATTCTGAAA
GGGCGCTTCAGAATCCTGAAGCTCCGCCTGGCCTACCACTGCAGGGAAGA
CATCGATAACATCTTCTTCACGTGCTGCATTCTCCACAACATGCTCCACT
CCTTCGACGGCATGAGCGTGTTCAAGGAGAACGTCGACTGGGCAGGCAGC
GCTGGTCTGCACGAC
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