mRNA_P-littoralis_Contig66.21.6 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig66.21.6
Unique NamemRNA_P-littoralis_Contig66.21.6
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
BLAST of mRNA_P-littoralis_Contig66.21.6 vs. uniprot
Match: A0A6H5JR14_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JR14_9PHAE)

HSP 1 Score: 520 bits (1340), Expect = 2.700e-177
Identity = 254/377 (67.37%), Postives = 300/377 (79.58%), Query Frame = 1
Query:    1 EKSFAEFPVAFRHPVHGGPIFNMSDPPHILKKIANACWHSDLAGKQRALAMWCTDEHGNEKLVRFSLKTGERAYRLVENDGDSLSTEERVASISTFRNLKPGCFNRNSWNCMNVGMSSKVLSGTMVRIIDKVQFDRVTMGESPDLELECYAALASRVDAFIDIFNG-----------------------NFGRSEYARKKGLDKKAGYITSADDSKLEELMDILRFFEKWRCNLEEKTTLGDVTWKKHFITEYSWTDIRVSILGFVSMCRYLFEDDSRFKVSRLRDTPRYVNPRHHCQDVVENRFGHMRDGLGSHRNPTATQAKERAARGDLNRSLHGRSRANHNRNARRGQDYIASGYRARIMLPITEGERSATMR 1062
            +++   FPVAF HPVH GPIFNMSDPPHILKKIAN CWHSD   K+R LAMWC DE GN  LVRFSL T ER Y  VENDG++LS EE+VASI+TFR + P CFNRNSWNCMNV  S+KVLSGT+V +I+KVQ D +TMG+  DLEL+CYAALA+++DAFIDIFNG                       NFGRSEYAR+ GLDK+AGYI+SADDSKLEEL++++RFF+KWR +L+EKTT+GD TWKKHFITE+SWTDIRV ILGFVSMCRYLFE+DSRFKVS  R  P ++N R+  QDV+E+ FGHMR GLGSHRNPTA QAKER ARGD+ R LHG  RAN+NRNAR+G+D++ASGYRA +MLP+ EGERS  +R
Sbjct:  362 QRNSVSFPVAFPHPVHLGPIFNMSDPPHILKKIANTCWHSDQDSKKRELAMWCGDEEGNTDLVRFSLATAERVYNQVENDGNTLSQEEKVASITTFRKVVPSCFNRNSWNCMNVSYSAKVLSGTIVCMIEKVQRDLLTMGKPLDLELDCYAALAAKMDAFIDIFNGKLYIIFVLAYCLVFLKQQMWWSGNFGRSEYARRNGLDKEAGYISSADDSKLEELINMVRFFDKWRSSLQEKTTMGDETWKKHFITEFSWTDIRVCILGFVSMCRYLFEEDSRFKVSPRRPWPHFINQRNCGQDVIEHCFGHMRQGLGSHRNPTAAQAKERGARGDILRGLHGPCRANYNRNARKGRDFVASGYRAEVMLPVGEGERSVRIR 738          
BLAST of mRNA_P-littoralis_Contig66.21.6 vs. uniprot
Match: D7FZI2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZI2_ECTSI)

HSP 1 Score: 311 bits (798), Expect = 2.980e-94
Identity = 169/357 (47.34%), Postives = 217/357 (60.78%), Query Frame = 1
Query:    1 EKSFAEFPVAFRHPVHGGPIFNMSDPPHILKKIANACWHSDLAGKQRALAMWCTDEHGNEKLVRFSLKTGERAYRLVENDGDSLSTEERVASISTFRNLKPGCFNRNSWNCMNVGMSSKVLSGTMVRIIDKVQFDRVTMGESPDLELECYAALASRVDAFIDIFNGNFGRSEYARKKGLDKKAGYITSADDSKLEELMDILRFFEKWRCNLEE---KTTLGDVTWKKHFITEYSWTDIRVSILGFVSMCRYLFEDDSRFKVSRLRDTPRYVNPRHHCQDVVENRFGHMRDGLGSHRNPTATQAKERAARGDLNRSLHGRSRANHNRNARRGQDYIASGYRARIMLPITEGERSATMR 1062
            E SFA F V F HPVH   +FNMSDP HILKKI NA WHSD+  KQR L MWC  +    K  +FSLKT +R Y  VE D DS++ EER A+++ F  +  G FNR ++ CMNV +S+KV+SGT+VR I +V+ ++ T GESPDL L CY  LA  ++ F+DIFNG++GR+++ R+  ++K  GY+TSA+D  LE LM+ILR+F+ W   L+E    T  GDV WKKHFIT +S T +                                      C         H+R GLG+ RNPTA QAKER+ RGDLNR LHG SRAN NRNAR G D+  S YR RIML +T+   +  +R
Sbjct:  678 EGSFAGFKVGFLHPVHLHEVFNMSDPMHILKKIVNALWHSDIPAKQRQLGMWCVTDQDELKFSQFSLKTAQRVYNDVEYDNDSMTPEERAATLTIFPGMPVGAFNRTNFTCMNVKLSAKVVSGTIVRAIREVRANQETRGESPDLALGCYEGLAVHLNDFVDIFNGDYGRTKFERRAKINKMKGYVTSAEDPILERLMEILRYFDDWNDMLQEFPPPTGGGDVGWKKHFITRHSRTLV--------------------------------------C--------AHIRAGLGTLRNPTAAQAKERSVRGDLNRGLHGGSRANFNRNARSGDDFNVSDYRGRIMLAVTQAVAAENVR 988          
BLAST of mRNA_P-littoralis_Contig66.21.6 vs. uniprot
Match: A0A6H5K7Z3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K7Z3_9PHAE)

HSP 1 Score: 266 bits (680), Expect = 8.560e-80
Identity = 154/357 (43.14%), Postives = 211/357 (59.10%), Query Frame = 1
Query:    1 EKSFAEFPVAFRHPVHGGPIFNMSDPPHILKKIANACWHSDLAGKQRALA--MWCTDEHGNEKLVRFSLKTGERAYRLVENDGDSLSTEERVASISTFRNLKPGCFNRNSWNCMNVGMSSKVLSGTMVRIIDKVQFDRVTMGESPDLELECYAALASRVDAFIDIFNGNFGRSEYARKKGLDKKAGYITSADDSKLEELMDILRFFEKWRCNLEEKTTLGDVTWKKHFITEYSWTDIRVSILGFVSMCRYLFEDDSRFKVSRLRDTPRYVNPRHHCQDVVENRFGHMRDGLGSHRNPTATQAKERAARGDLNRSLHGRSRANHNRNARRGQDY-IASGYRARIMLPITEGERSATMR 1062
            E+ FA+FP+AF HP HG P+FNMS PPH+L  + NA W+S L  KQR L    W  D    E  V FSLKT E  +   E  G SLS  E  +++  F   +P   +RNS NCM+V +S+K +S T V +    Q +++    SP+ E+ CYA LA  ++ F+DI NG +G +E  RK+G +K+ GYIT AD   L  L++IL FF+ W+ +LE     G   W  HFIT+YSWTD+R +ILGFV+MCRY+F+D+       L    R++ PR   QD++E+RF H+R G G+H+NPTA QA E A  GD  R  HG  R N +R+A  G  + +      R   P    ER+  +R
Sbjct:  313 EERFADFPMAFNHPHHGEPVFNMSGPPHLLX-VVNALWYSSLPSKQRHLKNLFWNRDTEEFE-WVSFSLKTLETVWVNEERGGGSLSAAEVASNLRRFLKFEPEMLDRNSHNCMSVRLSAKCVSRTAVYVCGCAQ-EKLA---SPNGEIACYAELAEVMNDFLDIMNGVYGLNEVERKQGGNKRKGYITGADSPLLGRLLEILEFFDSWQVSLEAH--FGPKEWANHFITDYSWTDMRTTILGFVAMCRYVFKDED------LVSGGRFLYPRMFSQDILEHRFAHIRSGRGTHKNPTAMQAIEAARAGDTARMFHGTRRRNSSRSA--GMAFQLEDSQGVRAAFPANASERAQVVR 653          
BLAST of mRNA_P-littoralis_Contig66.21.6 vs. uniprot
Match: A0A6H5KFP1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KFP1_9PHAE)

HSP 1 Score: 259 bits (661), Expect = 2.230e-75
Identity = 146/356 (41.01%), Postives = 205/356 (57.58%), Query Frame = 1
Query:    1 EKSFAEFPVAFRHPVHGGPIFNMSDPPHILKKIANACWHSDLAGKQRALA-MWCTDEHGNEKLVRFSLKTGERAYRLVENDGDSLSTEERVASISTFRNLKPGCFNRNSWNCMNVGMSSKVLSGTMVRIIDKVQFDRVTMGESPDLELECYAALASRVDAFIDIFNGNFGRSEYARKKGLDKKAGYITSADDSKLEELMDILRFFEKWRCNLEEKTTLGDVTWKKHFITEYSWTDIRVSILGFVSMCRYLFEDDSRFKVSRLRDTPR-YVNPRHHCQDVVENRFGHMRDGLGSHRNPTATQAKERAARGDLNRSLHGRSRANHNRNARRGQDYIASGYRARIMLPITEGERSATMR 1062
            E+   ++PVAF+HP H GP+FNMSDP H+LKK+ NA W+S L  K+R L  +W        +L  FSLKT E+A+R  E    + +  ER A++  F  +   C +R+S  CM+V +S+K +S T + +I   Q   + + + P  EL CYA +A  ++ F+DI NG F   E  R     KK GYIT AD   L  L+++L+FF+ W+ NL    T G   W  HFIT+ SW D+R  ILGFV+M RY+F D  R  V      PR ++ PR   QD++E+RF H+R G+G+H+ PTATQA  +A  GD  R  HG  R N +R+   G   + S    R+ LP+   ER   +R
Sbjct:  528 EQRHKDYPVAFKHPHHDGPVFNMSDPVHLLKKVVNALWYSGLDSKERHLQNLWWNPLTDAPELASFSLKTLEKAWREEEGHRANRTAAERAATLRRFLKMDAACLDRDSHTCMSVKLSAKCVSKTAMHVIASAQGKLLALDKPPSGELACYADVAEVMNDFLDIMNGVFNVLEQDRAHPQRKKEGYITGADCPPLTRLLEVLQFFDSWQSNLRH--TFGG-KWAPHFITDVSWKDMRSCILGFVAMSRYIFAD--RDLVEEEGGVPRRFLYPRMFSQDILEHRFAHIRTGMGTHKAPTATQAARQAKHGDTCRVSHGLQRRNASRST--GSFEVQSSASIRVALPVNASEREEVVR 876          
BLAST of mRNA_P-littoralis_Contig66.21.6 vs. uniprot
Match: A0A6H5JTX6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTX6_9PHAE)

HSP 1 Score: 241 bits (615), Expect = 2.850e-75
Identity = 125/183 (68.31%), Postives = 143/183 (78.14%), Query Frame = 1
Query:  481 IDIFNGNFGRSEYARKKGLDKKAGYITSADDSKLEELMDILRFFEKWRCNLEEKTTLGDVTWKKHFITEYSWTDIRVSILGFVSMCRYLFEDDSRFKVSRLRDTPRYVNPRHHCQDVVENRFGHMRDGLGSHRNPTATQAKERAARGDLNRSLHGRSRANHNRNARRGQDYIASGYRARIMLP 1029
            + I  GNFGRS+YARK GLDK  GY  SADDSKLE LMDILRFF++WR +LE + TLGD  WK HFIT++SWTDIRV ILG VSMCRYLFE DSRFK+  L D P ++N R   QD+VE+R+GHM   LGSH NPTA QAKERAA+ DL RSLHG SRANH   AR+G+D+IASG R RIMLP
Sbjct:   32 VRIHAGNFGRSDYARKNGLDKMVGYTGSADDSKLEGLMDILRFFDEWRASLEARPTLGD--WKAHFITDHSWTDIRVCILGTVSMCRYLFEKDSRFKIYPLSDVPHFINLRCIGQDIVEHRYGHMCQCLGSHCNPTAAQAKERAAQEDLQRSLHGISRANH---ARKGEDFIASGIRGRIMLP 209          
BLAST of mRNA_P-littoralis_Contig66.21.6 vs. uniprot
Match: A0A6H5K5I6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K5I6_9PHAE)

HSP 1 Score: 188 bits (477), Expect = 5.350e-54
Identity = 103/216 (47.69%), Postives = 145/216 (67.13%), Query Frame = 1
Query:  442 ECYAALASRVDAFIDIFNGNFGRSEYARKKGLDKKAGYITSADDSKLEELMDILRFFEKWRCNLEEK---TTLGD-VTWKKHFITEYSWTDIRVSILGFVSMCRYLFEDDSRFKVSRLR-DTPRYVNPRHHCQDVVENRFGHMRDGLGSHRNPTATQAKERAARGDLNRSLHGRSRANHNRN--ARRGQDYIASG--YRARIMLPITEGERSATMR 1062
            ECY  LA +++ F+DIFNGN+GRS+  RK G  K  G I S + + ++ L++IL FF+ W+  LE K   +  GD + WKKHFIT  SW D+R+SILGFVSMCRYLFED  RF++  L  +  R+++PR+  QD+ E+RF H+R  LG+HRNPTA +AK+R+A GDL R+ +G+ R N +RN  AR G D+   G   +  I+L +T+ E    +R
Sbjct:   47 ECYQTLARQMNDFVDIFNGNYGRSKVDRKDGSKKMVGCIRSFESAPMDRLLEILEFFDDWQSTLERKHIPSGEGDKLGWKKHFITHQSWFDLRLSILGFVSMCRYLFEDPERFQIDSLSPNCRRFLSPRNCSQDICEHRFSHIRAALGTHRNPTAREAKKRSAVGDLCRATNGKRRRNASRNPNARSGGDFEEHGDSEKKAIILAVTKVETGKEVR 262          
BLAST of mRNA_P-littoralis_Contig66.21.6 vs. uniprot
Match: A0A6H5JRH8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRH8_9PHAE)

HSP 1 Score: 194 bits (493), Expect = 6.890e-52
Identity = 114/280 (40.71%), Postives = 145/280 (51.79%), Query Frame = 1
Query:    1 EKSFAEFPVAFRHPVHGGPIFNMSDPPHILKKIANACWHSDLAGKQRALAMWCTDEHGNEKLVRFSLKTGERAYRLVENDGDSLSTEERVASISTFRNLKPGCFNRNSWNCMNVGMSSKVLSGTMVRIIDKVQFDRVTMGESPDLELECYAALASRVDAFIDIFNGNFGRSEYARKKGLDKKAGYITSADDSKLEELMDILRFFEKWRCNLEEKTTLGDVTWKKHFITEYSWTDIRVSILGFVSMCRYLFEDDSRFKVSRLRDTPRYVNPRHHCQDVVEN 840
            E+SF+ FPVA RH VH GP+FN+SDPPH++KKIAN  WHSDL G                                + +DG             T+    P                         R +D+ +  R+ +GE     +E       R+         NFGRS+YARK GLDK   YI SADDSKLEE+MDIL  F++WR +LE + TLGD  WK HFIT++SWTDIRV ILG VSMCRY+FE+DS FK+  L D P ++N R+  Q   +N
Sbjct:  337 EESFSNFPVALRHSVHLGPMFNVSDPPHLVKKIANTLWHSDLTGA-------------------------------IRDDG-------------TYHRADPA------------------------RPLDRGKTPRLAIGELSGTRVE-----DGRLRRHFQA--RNFGRSDYARKNGLDKMVSYIRSADDSKLEEVMDILLLFDEWRASLEARPTLGDGAWKAHFITDHSWTDIRVCILGTVSMCRYVFEEDSTFKIPPLSDVPHFINLRYIGQASQKN 541          
BLAST of mRNA_P-littoralis_Contig66.21.6 vs. uniprot
Match: A0A6H5KVF4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KVF4_9PHAE)

HSP 1 Score: 189 bits (480), Expect = 6.200e-50
Identity = 93/177 (52.54%), Postives = 118/177 (66.67%), Query Frame = 1
Query:    1 EKSFAEFPVAFRHPVHGGPIFNMSDPPHILKKIANACWHSDLAGKQRALAMWCTDEHGNEKLVRFSLKTGERAYRLVENDGDSLSTEERVASISTFRNLKPGCFNRNSWNCMNVGMSSKVLSGTMVRIIDKVQFDRVTMGESPDLELECYAALASRVDAFIDIFNGNFGRSEYARKK 531
            E SFA F V F HPVH   +FNMSDP HILKKI NA WHSD+  KQR L MWC  +    K  +FSLKT +R Y  VE D DS++ EER A+++ F  +  G FNR ++ CMNV +S+KV+SGT+VR I +V+ ++ T GESPDL L CY  LA  ++ F+DIFNG       ARK+
Sbjct:  769 EGSFAGFKVGFLHPVHLHEVFNMSDPMHILKKIVNALWHSDIPAKQRQLGMWCVTDQDELKFSQFSLKTAQRVYNDVEYDNDSMTPEERPATLTIFPGMPVGAFNRTNFTCMNVKLSAKVVSGTIVRAIREVRANQETRGESPDLALGCYEGLAVHLNDFVDIFNGEETTRGLARKR 945          
BLAST of mRNA_P-littoralis_Contig66.21.6 vs. uniprot
Match: A0A6H5L5M0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L5M0_9PHAE)

HSP 1 Score: 171 bits (434), Expect = 4.320e-44
Identity = 84/168 (50.00%), Postives = 108/168 (64.29%), Query Frame = 1
Query:    1 EKSFAEFPVAFRHPVHGGPIFNMSDPPHILKKIANACWHSDLAGKQRALAMWCTDEHGNEKLVRFSLKTGERAYRLVENDGDSLSTEERVASISTFRNLKPGCFNRNSWNCMNVGMSSKVLSGTMVRIIDKVQFDRVTMGESPDLELECYAALASRVDAFIDIFNGNF 504
            E SF  F V   HPVH   +FNMSDP HILKKI NA WHSD+  KQR L MWC  +    K  +FSLKT +R Y  VE D +S++ EER A+++ F  +    FNR ++ CMNV +S+KV+SGT+VR I +V+ +R T GE PDL L CY      ++ F+DIFN  F
Sbjct:  576 EGSFTSFKVGILHPVHLHEVFNMSDPMHILKKIVNALWHSDIPAKQRQLGMWCVTDQDELKFSQFSLKTAQRVYNDVEYDNNSITPEERAATLTIFPGMPVSAFNRTNFTCMNVKLSAKVVSGTIVRAIREVRANRETRGEPPDLALGCYEG---HLNDFVDIFNAAF 740          
BLAST of mRNA_P-littoralis_Contig66.21.6 vs. uniprot
Match: A0A6H5K071_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K071_9PHAE)

HSP 1 Score: 166 bits (419), Expect = 3.300e-42
Identity = 109/324 (33.64%), Postives = 165/324 (50.93%), Query Frame = 1
Query:  121 DLAGKQRALAMWCTD-EHGNEKLVRFSLKTGERAYRLVENDGDSLSTEERVASISTFRNLKPGCFNRNSWNCMNVGMSSKVLSGTMVRIIDKVQFDRVTMGESPDLELECYAALASRVDAFIDIFNGN--FGRSEYARKKGLDKKAGYITSADDSKLEELMDILRFFEKWRCNLE----EKTTLGDVTWKKHFITEYSWTDIRVSILGFVSMCRYLFEDDSRFKVSRLRDTPRYVNPRHHCQDVVENRFGHMRDGLGSHRNPTATQAKERAARGDLNRSLHGRSRANHNRNARRGQDYIASGY---RARIMLPITEGERSATMR 1062
            DL  K R LA  C D E G  +LV FSLKT E+ +   E  G     EE+ A ++ +  +    FNR+ +NCM+V ++ K LS T VR+ +      V  G+ PDL + CYA +A +V+ F+DI NG   + R      K +D +   ITS D   L+ L++IL +F+ W  +L         L D+     F+ + +W D+R++ILGFV+M RY+F DD  +     R   +++   +   D  E RFGH+R   G H+NP    A     R D+ R    +++ +  R++ RG+D          A   LP+ E +R   MR
Sbjct:  363 DLPWKSRNLAKVCVDPETGGYELVEFSLKTLEKVWYTEEKGGGKWLLEEKTAQLTRYSKVVSEQFNRSGFNCMSVRLAVKSLSATAVRMCNDANAKLVRSGQKPDLSIACYAEMARQVNDFVDIMNGKCAYNRDPIDVSKRIDIRKSCITSKDSPLLDRLLEILEWFDTWWQDLNLFGGSDLALDDL-----FLPDQTWDDLRLTILGFVAMTRYVFGDDD-WVTEGSRGRYKFMRDWNQASDTCEKRFGHIRANQGCHKNPRKESAFAAGHRADVVR----KAQMSKRRDSDRGKDAFKLDMVSAAAEATLPVNEQQRRYPMR 676          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig66.21.6 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JR14_9PHAE2.700e-17767.37Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FZI2_ECTSI2.980e-9447.34Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5K7Z3_9PHAE8.560e-8043.14Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KFP1_9PHAE2.230e-7541.01Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JTX6_9PHAE2.850e-7568.31Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K5I6_9PHAE5.350e-5447.69Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JRH8_9PHAE6.890e-5240.71Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KVF4_9PHAE6.200e-5052.54Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5L5M0_9PHAE4.320e-4450.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K071_9PHAE3.300e-4233.64Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig66contigP-littoralis_Contig66:98766..101146 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog10224.XP_006816116.1
PFAMsTHAP,Tnp_P_element
Model size1067
Max annot lvl33208|Metazoa
Hectar predicted targeting categoryother localisation
Exons4
Evalue3.06e-05
EggNOG OGs29QV0@1|root,2RX9E@2759|Eukaryota,39YJ4@33154|Opisthokonta,3BIE9@33208|Metazoa,3D8SA@33213|Bilateria
DescriptionTransposase protein
Cds size1065
COG categoryS
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791374.8191612-CDS-P-littoralis_Contig66:98765..991221680791374.8191612-CDS-P-littoralis_Contig66:98765..99122Pylaiella littoralis U1_48CDSP-littoralis_Contig66 98766..99122 +
1680791374.8346598-CDS-P-littoralis_Contig66:99437..995761680791374.8346598-CDS-P-littoralis_Contig66:99437..99576Pylaiella littoralis U1_48CDSP-littoralis_Contig66 99438..99576 +
1680791374.8477201-CDS-P-littoralis_Contig66:100432..1007611680791374.8477201-CDS-P-littoralis_Contig66:100432..100761Pylaiella littoralis U1_48CDSP-littoralis_Contig66 100433..100761 +
1680791374.8580854-CDS-P-littoralis_Contig66:100906..1011461680791374.8580854-CDS-P-littoralis_Contig66:100906..101146Pylaiella littoralis U1_48CDSP-littoralis_Contig66 100907..101146 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig66.21.6prot_P-littoralis_Contig66.21.6Pylaiella littoralis U1_48polypeptideP-littoralis_Contig66 98766..101146 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig66.21.6

>prot_P-littoralis_Contig66.21.6 ID=prot_P-littoralis_Contig66.21.6|Name=mRNA_P-littoralis_Contig66.21.6|organism=Pylaiella littoralis U1_48|type=polypeptide|length=355bp
EKSFAEFPVAFRHPVHGGPIFNMSDPPHILKKIANACWHSDLAGKQRALA
MWCTDEHGNEKLVRFSLKTGERAYRLVENDGDSLSTEERVASISTFRNLK
PGCFNRNSWNCMNVGMSSKVLSGTMVRIIDKVQFDRVTMGESPDLELECY
AALASRVDAFIDIFNGNFGRSEYARKKGLDKKAGYITSADDSKLEELMDI
LRFFEKWRCNLEEKTTLGDVTWKKHFITEYSWTDIRVSILGFVSMCRYLF
EDDSRFKVSRLRDTPRYVNPRHHCQDVVENRFGHMRDGLGSHRNPTATQA
KERAARGDLNRSLHGRSRANHNRNARRGQDYIASGYRARIMLPITEGERS
ATMRP
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mRNA from alignment at P-littoralis_Contig66:98766..101146+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig66.21.6 ID=mRNA_P-littoralis_Contig66.21.6|Name=mRNA_P-littoralis_Contig66.21.6|organism=Pylaiella littoralis U1_48|type=mRNA|length=2381bp|location=Sequence derived from alignment at P-littoralis_Contig66:98766..101146+ (Pylaiella littoralis U1_48)
GAGAAATCCTTCGCGGAGTTCCCGGTCGCCTTCCGTCATCCTGTCCACGG AGGCCCGATTTTCAACATGAGCGACCCTCCGCATATCCTGAAGAAGATCG CAAACGCCTGCTGGCACAGTGACCTCGCCGGTAAGCAGCGTGCCCTCGCG ATGTGGTGCACCGACGAACACGGCAACGAGAAGTTGGTTCGTTTCTCGCT GAAGACCGGCGAGAGAGCGTACCGGCTTGTCGAGAACGACGGCGACAGCC TTTCCACCGAGGAGCGAGTGGCATCCATCTCGACCTTCCGCAACTTGAAG CCGGGGTGCTTCAACCGGAACAGCTGGAACTGCATGAACGTCGGCATGTC TTCGAAGGTGATCGACCGCTGTTAGAAGCGTAATCATAGACCTCATTGTC TCGGGTGGGCGGTAAACCTTTATATGCGTGTACCGTGTCACGTGTATAAA TCCCCTTGCCTCGTGTCATGCCGCATTTATATCCCACGAGGGTTACAAGC TAGCGTTACTGAGCACGGCAAACATGGTAGTGCTAAGCGCCTGCAGTACT CTGTGTTGTGTTCGAAGGTCGTGTGCACGAATGGCTTGTAGACGATGCCG AGAGGGGCGCATGCAGTCTCGATCCATCTCTCACCCGAGACCGTCCCATC ATGTTGTCCGTTATTGTCCTAGGTGCTATCGGGGACGATGGTTCGTATCA TCGACAAGGTTCAGTTCGACCGCGTGACCATGGGAGAATCACCCGACCTG GAGTTGGAGTGCTACGCAGCACTAGCGTCGAGGGTGGATGCCTTCATCGA CATCTTCAACGGCAAGTGAAGGTGTTCGTATTGTCGCAGTATGTGGAGGG GCCTGTCGCGTGACTATGTTCCGTGCTCTCCTTTTTCCCCTGAAGTTTCC CGGCACCCGGGTACACTCTTTCTCTATACAGGGGTGGTTGTTCCGAAGTC CGGAAATACCGGCAAACGCCCTGTCTCCCGGCGCAGCTCGTGACGGAGAT TTTTTTTTTTAGCTTGATTGTTGAGTTTTCATGGGCTAAAAACCCGCCAC ACTTGTGTTCTAACGGGATTGAACAGATATCGTAATTTGCCAATAAAATC AGTTATTATTGTTTTCAAATAAGTCTGTTAAACAGAGATATCGCACCAAA ACAGCACATCGAAGACCAATATACTGTTTTATTCGAGACAACTATTCTTT CGATTTCAAAATAGAGTGCGGCAAACTATTCCTCTCATCATTGCCGCGAA CTGTTTGTGGCGTTGTTGGTGGTGGTGCAGGGGGTGGTGTTTGTGTCGTT TTTGTGTGATAAAATGTGCTGTGTAATGGCTGCAACGGATAGATTTCGTG ACATATTATGCGGATGCCGGGGTGCGGAGTGCAGGATGGGGGCTCAGTGG TGAGTTTTGGGGCCCCGTGGAACGATTCTCGCAACAAATGATGCAATTAG CCAAAAACATAAATAACTCTGCAGCTATGTATCGACATATCTCGACGAGG CGATCACTAATATTGTTGTTTCACGTCCCAACGCGATTGAACAAAAAGGA GAGCACGGACCTACTTGTTTTTTTTTATATATATTTCCTCGCGCAATGTA CACACTCTGTGCGCGTCGTTTGTCTCTTCCCACACGGCCCCATGTATGTG TATGTGTATATATTCAGGAAACTTCGGCCGCTCGGAGTACGCGCGCAAGA AAGGCCTCGACAAGAAAGCGGGCTACATTACATCGGCCGACGACTCCAAA CTAGAAGAACTCATGGACATCTTGCGTTTTTTCGAGAAGTGGCGGTGCAA TCTGGAGGAGAAGACGACGCTGGGCGACGTCACCTGGAAGAAGCACTTCA TCACGGAGTACTCGTGGACCGACATCCGGGTGTCCATCCTTGGCTTCGTC AGTATGTGCCGATACTTGTTCGAGGATGATTCGAGGTTCAAGGTCTCCCG CCTGCGCGACACGCCCCGCTACGTCAACCCGCGGCACCATTGCCAGGTAT CATGTGCACACAGCGTACTATGTTGTGGCTGATTCTGCCTGTGGGTCTAG TGTGCGTCCGGTCCGACTCCGAGGAGCATTTTCTGAAATTGCGTCGACCT CTCCCCCCTGTTTTCCACCACTTCGCCTTCTAACCCCACAGGATGTCGTG GAGAACCGGTTCGGGCACATGCGCGACGGCCTTGGGTCGCACAGAAACCC GACGGCTACGCAAGCGAAGGAGAGGGCAGCACGGGGGGACCTGAATCGTA GTCTGCACGGGCGTTCCCGCGCAAACCACAATCGGAATGCGCGGAGAGGA CAGGACTACATCGCGTCCGGATACCGGGCACGGATCATGCTCCCAATAAC GGAAGGAGAGCGGTCTGCTACCATGCGGCCT
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Coding sequence (CDS) from alignment at P-littoralis_Contig66:98766..101146+

>mRNA_P-littoralis_Contig66.21.6 ID=mRNA_P-littoralis_Contig66.21.6|Name=mRNA_P-littoralis_Contig66.21.6|organism=Pylaiella littoralis U1_48|type=CDS|length=1065bp|location=Sequence derived from alignment at P-littoralis_Contig66:98766..101146+ (Pylaiella littoralis U1_48)
GAGAAATCCTTCGCGGAGTTCCCGGTCGCCTTCCGTCATCCTGTCCACGG
AGGCCCGATTTTCAACATGAGCGACCCTCCGCATATCCTGAAGAAGATCG
CAAACGCCTGCTGGCACAGTGACCTCGCCGGTAAGCAGCGTGCCCTCGCG
ATGTGGTGCACCGACGAACACGGCAACGAGAAGTTGGTTCGTTTCTCGCT
GAAGACCGGCGAGAGAGCGTACCGGCTTGTCGAGAACGACGGCGACAGCC
TTTCCACCGAGGAGCGAGTGGCATCCATCTCGACCTTCCGCAACTTGAAG
CCGGGGTGCTTCAACCGGAACAGCTGGAACTGCATGAACGTCGGCATGTC
TTCGAAGGTGCTATCGGGGACGATGGTTCGTATCATCGACAAGGTTCAGT
TCGACCGCGTGACCATGGGAGAATCACCCGACCTGGAGTTGGAGTGCTAC
GCAGCACTAGCGTCGAGGGTGGATGCCTTCATCGACATCTTCAACGGAAA
CTTCGGCCGCTCGGAGTACGCGCGCAAGAAAGGCCTCGACAAGAAAGCGG
GCTACATTACATCGGCCGACGACTCCAAACTAGAAGAACTCATGGACATC
TTGCGTTTTTTCGAGAAGTGGCGGTGCAATCTGGAGGAGAAGACGACGCT
GGGCGACGTCACCTGGAAGAAGCACTTCATCACGGAGTACTCGTGGACCG
ACATCCGGGTGTCCATCCTTGGCTTCGTCAGTATGTGCCGATACTTGTTC
GAGGATGATTCGAGGTTCAAGGTCTCCCGCCTGCGCGACACGCCCCGCTA
CGTCAACCCGCGGCACCATTGCCAGGATGTCGTGGAGAACCGGTTCGGGC
ACATGCGCGACGGCCTTGGGTCGCACAGAAACCCGACGGCTACGCAAGCG
AAGGAGAGGGCAGCACGGGGGGACCTGAATCGTAGTCTGCACGGGCGTTC
CCGCGCAAACCACAATCGGAATGCGCGGAGAGGACAGGACTACATCGCGT
CCGGATACCGGGCACGGATCATGCTCCCAATAACGGAAGGAGAGCGGTCT
GCTACCATGCGGCCT
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