mRNA_P-littoralis_Contig66.120.2 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig66.120.2
Unique NamemRNA_P-littoralis_Contig66.120.2
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
BLAST of mRNA_P-littoralis_Contig66.120.2 vs. uniprot
Match: D7FMZ6_ECTSI (NnrU domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FMZ6_ECTSI)

HSP 1 Score: 561 bits (1447), Expect = 1.300e-198
Identity = 266/297 (89.56%), Postives = 282/297 (94.95%), Query Frame = 1
Query:  337 RRQRRGLLGNTLSMSVTELEDLQRQSGLVGEDAAVFSFQEQSLKSWGSFLAVLGTVLTALYYLWLNPDTGYGDDFVRFLERAAGGDTTVTITLILGIFAVAHSGLASLRPKGEELIGARAWRVLFGIVSLPLAVTAVAYFINHRYDGVQLWNIKMVPGVHDACWITSFISFVFLYPSTFNLLEVAAVDKPQLHLWETGVTRITRHPQTFGQGLWCAAHLAWVGTSFAAVTSAGLMAHHLFSLWNGDRRLKDKYGDDFDAVQKRTSVVPFQAILEGRQQLPSDYWKEFARGPYFIIVG 1227
            R + RG   N L+MS +ELEDLQRQSGLVGEDAAVFSF+EQSLKSWG+FLAVLGTVLTALYYLWL P+TGYGDDFVRFLE  +GGD+T+T+TLILG+FAVAHSGLASLRPKGEELIGARAWRVLFG+VSLPLAVTAVAYFINHRYDGVQLWNIKMVPGVHDACWITSFISFVFLYPSTFNLLEVAAVDKPQLHLWETGVTRITRHPQTFGQ LWCAAHLAWVGTSF AVTSAGLMAHHLFSLWNGDRRLK+KYGDDF+AV++RTS VPFQAI EGRQQLPSDYWKEFARGPYFII G
Sbjct:    4 RERHRGSSVNPLAMSASELEDLQRQSGLVGEDAAVFSFEEQSLKSWGAFLAVLGTVLTALYYLWLKPETGYGDDFVRFLEGLSGGDSTITVTLILGVFAVAHSGLASLRPKGEELIGARAWRVLFGVVSLPLAVTAVAYFINHRYDGVQLWNIKMVPGVHDACWITSFISFVFLYPSTFNLLEVAAVDKPQLHLWETGVTRITRHPQTFGQALWCAAHLAWVGTSFTAVTSAGLMAHHLFSLWNGDRRLKEKYGDDFEAVRERTSAVPFQAIFEGRQQLPSDYWKEFARGPYFIIAG 300          
BLAST of mRNA_P-littoralis_Contig66.120.2 vs. uniprot
Match: A0A835Z2B9_9STRA (NnrU protein-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z2B9_9STRA)

HSP 1 Score: 483 bits (1242), Expect = 3.360e-167
Identity = 219/308 (71.10%), Postives = 259/308 (84.09%), Query Frame = 1
Query:  364 NTLSMSVTELEDLQRQSGLVGEDAAVFSFQEQSLKSWGSFLAVLGTVLTALYYLWLNPDTGYGDDFVRFLERAAGGDTTVTITLILGIFAVAHSGLASLRPKGEELIGARAWRVLFGIVSLPLAVTAVAYFINHRYDGVQLWNIKMVPGVHDACWITSFISFVFLYPSTFNLLEVAAVDKPQLHLWETGVTRITRHPQTFGQGLWCAAHLAWVGTSFAAVTSAGLMAHHLFSLWNGDRRLKDKYGDDFDAVQKRTSVVPFQAILEGRQQLPSDYWKEFARGPYFIIVGGTIAAYFAHPFMQAGSYYMH 1287
            + L +S  ++E+LQ  SGL+GEDAA FS QEQ L SW SF  V   V+ AL+YLW+N  TGYGDDF+R LE  +GG+++VTI L+LGIFAVAHSGLASLRPKGEE+IGARAWRVLFG+VSLPLA++ + YFINHRYDGV LWN+K VPGVHD CWI+SFISF FLYPSTFNLLEVAAVDKPQLH+WETGV RITRHPQ  GQG+WC AH  WVGTSF  +TSA LM HHLF++WNGDRRL DKYG+ F+ V+ RTSV+PFQA++EGRQ+LP+DYWKE+ARGPY II  GT+ AY+ HPFMQAGS+ +H
Sbjct:   57 SALQLSTRDIEELQDASGLIGEDAAAFSLQEQKLASWISFGGVFTVVMAALWYLWINESTGYGDDFIRALESVSGGNSSVTIVLLLGIFAVAHSGLASLRPKGEEIIGARAWRVLFGVVSLPLALSCLVYFINHRYDGVALWNLKGVPGVHDFCWISSFISFFFLYPSTFNLLEVAAVDKPQLHMWETGVMRITRHPQFVGQGIWCLAHALWVGTSFTLLTSAMLMGHHLFAVWNGDRRLADKYGEAFEKVKARTSVMPFQAVIEGRQKLPADYWKEWARGPYAIIAAGTVGAYYLHPFMQAGSWTLH 364          
BLAST of mRNA_P-littoralis_Contig66.120.2 vs. uniprot
Match: A0A7S3YAC1_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3YAC1_HETAK)

HSP 1 Score: 422 bits (1085), Expect = 2.760e-143
Identity = 188/287 (65.51%), Postives = 229/287 (79.79%), Query Frame = 1
Query:  418 LVGEDAAVFSFQEQSLKSWGSFLAVLGTVLTALYYLWLNPDTGYGDDFVRFLERAAGGDTTVTITLILGIFAVAHSGLASLRPKGEELIGARAWRVLFGIVSLPLAVTAVAYFINHRYDGVQLWNIKMVPGVHDACWITSFISFVFLYPSTFNLLEVAAVDKPQLHLWETGVTRITRHPQTFGQGLWCAAHLAWVGTSFAAVTSAGLMAHHLFSLWNGDRRLKDKYGDDFDAVQKRTSVVPFQAILEGRQQLPSDYWKEFARGPYFIIVGGTIAAYFAHPFMQAGSY 1278
            LVGEDAAVF F  Q ++SWG F  ++ +VL  LY  W+  DTG+GDD++R LE  AGGD+ V + ++L IF V HSGLASLR KGE +IGARAWRVLF + SLPLA++AV YFINHRYDG  LW+++  PG+H  CW  SF+SF+FLYPSTFNLLEVAAVD+P+ HLWETGV R+TRHPQ  GQGLWC AH  WVGTSF  V +AGLMAHHLF+ W+GDRRL++++GD F  V++RTS++PFQAILEGRQQLP DY+KEF RGPY I+   T+ AYFAHP+MQA SY
Sbjct:   81 LVGEDAAVFEFSNQKIQSWGIFSVLVTSVLGLLYVTWIKADTGFGDDYIRLLESIAGGDSHVVMGMLLTIFGVVHSGLASLRTKGESIIGARAWRVLFALASLPLALSAVVYFINHRYDGALLWSLRDFPGMHGLCWALSFVSFLFLYPSTFNLLEVAAVDRPEQHLWETGVARVTRHPQAVGQGLWCLAHTLWVGTSFMCVATAGLMAHHLFACWHGDRRLEERHGDAFRRVKERTSIMPFQAILEGRQQLPQDYYKEFLRGPYLIVTVATVGAYFAHPYMQAYSY 367          
BLAST of mRNA_P-littoralis_Contig66.120.2 vs. uniprot
Match: A0A8J4AM61_9CHLO (NnrU domain-containing protein n=2 Tax=Volvox TaxID=3066 RepID=A0A8J4AM61_9CHLO)

HSP 1 Score: 413 bits (1061), Expect = 8.780e-140
Identity = 188/290 (64.83%), Postives = 230/290 (79.31%), Query Frame = 1
Query:  409 QSGLVGEDAAVFSFQEQSLKSWGSFLAVLGTVLTALYYLWLNPDTGYGDDFVRFLERAAGGDTTVTITLILGIFAVAHSGLASLRPKGEELIGARAWRVLFGIVSLPLAVTAVAYFINHRYDGVQLWNIKMVPGVHDACWITSFISFVFLYPSTFNLLEVAAVDKPQLHLWETGVTRITRHPQTFGQGLWCAAHLAWVGTSFAAVTSAGLMAHHLFSLWNGDRRLKDKYGDDFDAVQKRTSVVPFQAILEGRQQLPSDYWKEFARGPYFIIVGGTIAAYFAHPFMQAGSY 1278
            Q  ++GEDAAVF  ++Q++KSW  F  +L TVL ALY +W+ P  G  DD++  ++  AG  + +TITLIL  FA+AHSGLA LRP GEE+IGARA+RV+F +VSLPLA+ A+ YFINHRYDGV LW+++ VPGVH+  W+ +FISF FLYPSTFN+LEVAAVDKP+LHLWETG+ RITRHPQ  GQ +WCAAH  W+G+SF  VTSA LMAHHLF  W+GDRRLK KYGD F+AV+ RTSVVPF AIL+GRQ+LP+DYWKEFAR PYF +   TI AY AHP MQA S+
Sbjct:   70 QQKMIGEDAAVFDIEKQNIKSWALFTVLLSTVLGALYLVWIQPGVGLADDYLAAIQSIAGS-SEITITLILLFFAIAHSGLAGLRPYGEEVIGARAYRVIFALVSLPLAIVAIVYFINHRYDGVPLWDVRGVPGVHELVWVLNFISFWFLYPSTFNILEVAAVDKPKLHLWETGIMRITRHPQMVGQAIWCAAHTMWIGSSFMVVTSACLMAHHLFGCWHGDRRLKAKYGDAFEAVKARTSVVPFAAILDGRQKLPADYWKEFARMPYFTVTALTIGAYLAHPLMQAASF 358          
BLAST of mRNA_P-littoralis_Contig66.120.2 vs. uniprot
Match: A0A7S4G126_9EUGL (Hypothetical protein n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S4G126_9EUGL)

HSP 1 Score: 416 bits (1070), Expect = 1.280e-139
Identity = 191/288 (66.32%), Postives = 226/288 (78.47%), Query Frame = 1
Query:  424 GEDAAVFSFQEQSLKSWGSFLAVLGTVLTALYYLWLNPDTGYGDDFVRFLERAAGGDTTVTITLILGIFAVAHSGLASLRPKGEELIGARAWRVLFGIVSLPLAVTAVAYFINHRYDGVQLWNIKMVPGVHDACWITSFISFVFLYPSTFNLLEVAAVDKPQLHLWETGVTRITRHPQTFGQGLWCAAHLAWVGTSFAAVTSAGLMAHHLFSLWNGDRRLKDKYGDDFDAVQKRTSVVPFQAILEGRQQLPSDYWKEFARGPYFIIVGGTIAAYFAHPFMQAGSYYMH 1287
            GEDAA F+  +Q  + W  F+AVL TVL  L+ +W+ P TG  D+FV  LE   GG+T  T+ LIL IF +AHSGLA LRPKGE +IG RA+RVLFG+VSLPLA+ A+ YFINHRYDG  LW+IK VPGVH A WI +FISF+FLYPSTFNLLE+AAV+KP+LH+WETG+ RITRHPQ  GQGLWC AH AW+G+SFA VTS GLMAHH F +W+GDRRL  KYG+ F+ V+ RTS+ PF AIL+GRQQLP DYW EFARGPY  IV GT+ AYFAHP MQ GSY +H
Sbjct:  178 GEDAAAFTLSDQRTEDWVKFVAVLVTVLGGLFVVWIYPPTGLADEFVDALEGLMGGNTEATMMLILVIFGIAHSGLAGLRPKGEAIIGERAYRVLFGLVSLPLAILALVYFINHRYDGTLLWDIKGVPGVHSAVWILTFISFIFLYPSTFNLLEIAAVEKPKLHMWETGIMRITRHPQFVGQGLWCIAHTAWIGSSFAVVTSIGLMAHHTFGVWHGDRRLFAKYGEAFEEVKARTSIWPFAAILDGRQQLPKDYWLEFARGPYLAIVVGTVGAYFAHPLMQLGSYSLH 465          
BLAST of mRNA_P-littoralis_Contig66.120.2 vs. uniprot
Match: A0A0G4ECX7_VITBC (NnrU domain-containing protein n=2 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4ECX7_VITBC)

HSP 1 Score: 410 bits (1055), Expect = 7.370e-139
Identity = 188/288 (65.28%), Postives = 230/288 (79.86%), Query Frame = 1
Query:  415 GLVGEDAAVFSFQEQSLKSWGSFLAVLGTVLTALYYLWLNPDTGYGDDFVRFLERAAGGDTTVTITLILGIFAVAHSGLASLRPKGEELIGARAWRVLFGIVSLPLAVTAVAYFINHRYDGVQLWNIKMVPGVHDACWITSFISFVFLYPSTFNLLEVAAVDKPQLHLWETGVTRITRHPQTFGQGLWCAAHLAWVGTSFAAVTSAGLMAHHLFSLWNGDRRLKDKYGDDFDAVQKRTSVVPFQAILEGRQQLPSDYWKEFARGPYFIIVGGTIAAYFAHPFMQAGSY 1278
            G VGEDAA F  +EQSLKSWG F  +L TVL ALY  W++P+TG+G D++R LE  +     V +T ++GIFAVAHSGLASLRP+ E +IGARAWRV+F ++SLPLA +A+AYFINHRYDGVQLW+++ VPGVH+  W  S +SF FLYPSTFNLLEVAAVDKPQLHLWE+GV RITRHPQ  GQGLWC AH  W+G SF   TS  LMAHHLF +W+GD+RL+ KYG+ FD VQ+RTSVVPF A+++GRQ+LP DYWKEF R PY +++  T+ AY+AHPFMQA S+
Sbjct:   71 GFVGEDAARFDLEEQSLKSWGIFSVLLVTVLGALYVSWISPETGFGKDYLRLLESTSDSPEVV-MTELMGIFAVAHSGLASLRPRMEGIIGARAWRVVFALMSLPLAFSAIAYFINHRYDGVQLWDLRNVPGVHEVVWGLSLVSFFFLYPSTFNLLEVAAVDKPQLHLWESGVMRITRHPQMVGQGLWCLAHTLWIGNSFTLWTSVLLMAHHLFGVWHGDQRLRAKYGEAFDQVQRRTSVVPFAAVIDGRQRLPDDYWKEFVRLPYAVVLAATLGAYWAHPFMQAYSW 357          
BLAST of mRNA_P-littoralis_Contig66.120.2 vs. uniprot
Match: A0A835XZY9_9CHLO (NnrU domain-containing protein n=1 Tax=Edaphochlamys debaryana TaxID=47281 RepID=A0A835XZY9_9CHLO)

HSP 1 Score: 400 bits (1029), Expect = 5.780e-135
Identity = 184/290 (63.45%), Postives = 226/290 (77.93%), Query Frame = 1
Query:  418 LVGEDAAVFSFQEQSLKSWGSFLAVLGTVLTALYYLWLNPDTGYGDDFVRFLERAAGGDTTVTITLILGIFAVAHSGLASLRPKGEELIGARAWRVLFGIVSLPLAVTAVAYFINHRYDGVQLWNIKMVPGVHDACWITSFISFVFLYPSTFNLLEVAAVDKPQLHLWETGVTRITRHPQTFGQGLWCAAHLAWVGTSFAAVTSAGLMAHHLFSLWNGDRRLKDKYGDDFDAVQKRTSVVPFQAILEGRQQLPSDYWKEFARGPYFIIVGGTIAAYFAHPFMQAGSYYMH 1287
            LVGED+A F   +QSL+SWG F  +L TVL ALY +W+ P  G+ DD++  LE    G+   T+ LIL +FA+AHSGLA LRP GE++IGARA+RV+F +VSLPLA+ ++ YFINHRYDGV LW+++ VPGVH   WI +FISF FLYPSTFN+LEVAAVD+P+LHLWETG+ RITRHPQ  GQGLWCAAH  WVG+S   V SAGLMAHHLF  W+GDRRLK KYGD F+AV+ RTSV+PF AI +GRQQLP+DYWKEF R PY  I   T+ AY+AHP MQ+ ++ +H
Sbjct:   71 LVGEDSAAFDLSKQSLQSWGLFTVLLSTVLGALYLVWIQP-AGFADDYLAALESWTSGNPEATMALILLVFAIAHSGLAGLRPYGEKVIGARAYRVIFALVSLPLALVSIVYFINHRYDGVALWDVRDVPGVHSLVWIVNFISFYFLYPSTFNILEVAAVDEPKLHLWETGIMRITRHPQMVGQGLWCAAHTLWVGSSVMLVASAGLMAHHLFGCWHGDRRLKAKYGDAFEAVKARTSVLPFAAIADGRQQLPADYWKEFLRMPYVAITILTLGAYWAHPIMQSAAFNLH 359          
BLAST of mRNA_P-littoralis_Contig66.120.2 vs. uniprot
Match: A0A6F8P139_EUGGR (Zeta-carotene isomerase n=1 Tax=Euglena gracilis TaxID=3039 RepID=A0A6F8P139_EUGGR)

HSP 1 Score: 399 bits (1026), Expect = 2.000e-133
Identity = 188/286 (65.73%), Postives = 218/286 (76.22%), Query Frame = 1
Query:  421 VGEDAAVFSFQEQSLKSWGSFLAVLGTVLTALYYLWLNPDTGYGDDFVRFLERAAGGDTTVTITLILGIFAVAHSGLASLRPKGEELIGARAWRVLFGIVSLPLAVTAVAYFINHRYDGVQLWNIKMVPGVHDACWITSFISFVFLYPSTFNLLEVAAVDKPQLHLWETGVTRITRHPQTFGQGLWCAAHLAWVGTSFAAVTSAGLMAHHLFSLWNGDRRLKDKYGDDFDAVQKRTSVVPFQAILEGRQQLPSDYWKEFARGPYFIIVGGTIAAYFAHPFMQAGSY 1278
            +GEDAAVF  Q Q L  W  F AV   V+  L+  W+ P TG  D+FVR LE   GG++  T+ LIL IF VAHSGLA LR +GEELIGARA+RVLFG++SLPLA+ A+ YF+NHRYDGVQLW+ + VPGVH   WIT+FISF FLYPSTFNLLEVAAVD+P++HLWETG+ RITRHPQ  GQ LWC AH  W+G +FA VTSAGLMAHHLF  W+GDRRL  KYG  F+ V+ RTSV PF AILEGRQ LP DYW+EFAR PY  I  GT+AAY AHP MQ+ SY
Sbjct:  145 LGEDAAVFDLQSQRLADWVKFGAVFIAVMGGLFVTWVYPPTGLADEFVRSLEALMGGNSEATMLLILLIFGVAHSGLAGLRTQGEELIGARAYRVLFGLISLPLALVAIVYFMNHRYDGVQLWSFRGVPGVHSFVWITTFISFFFLYPSTFNLLEVAAVDQPKVHLWETGIMRITRHPQMVGQLLWCMAHTLWIGNTFAIVTSAGLMAHHLFGCWHGDRRLAAKYGPAFEEVKARTSVWPFVAILEGRQTLPPDYWREFARAPYLAITIGTVAAYLAHPLMQSSSY 430          
BLAST of mRNA_P-littoralis_Contig66.120.2 vs. uniprot
Match: A0A061R8M7_9CHLO (Zeta-carotene isomerase n=2 Tax=Tetraselmis sp. GSL018 TaxID=582737 RepID=A0A061R8M7_9CHLO)

HSP 1 Score: 397 bits (1019), Expect = 2.850e-133
Identity = 177/306 (57.84%), Postives = 227/306 (74.18%), Query Frame = 1
Query:  367 TLSMSVTELEDLQRQSGLVGEDAAVFSFQEQSLKSWGSFLAVLGTVLTALYYLWLNPDTGYGDDFVRFLERAAGGDTTVTITLILGIFAVAHSGLASLRPKGEELIGARAWRVLFGIVSLPLAVTAVAYFINHRYDGVQLWNIKMVPGVHDACWITSFISFVFLYPSTFNLLEVAAVDKPQLHLWETGVTRITRHPQTFGQGLWCAAHLAWVGTSFAAVTSAGLMAHHLFSLWNGDRRLKDKYGDDFDAVQKRTSVVPFQAILEGRQQLPSDYWKEFARGPYFIIVGGTIAAYFAHPFMQAGSYYM 1284
            +LS  V  L++ + Q+ LVGED+A F  Q+Q+L++WG F  +L TVL  LY +W+ P  G+ DD+VR L      +T  T+ +ILG+FAVAHSGLA LR KGE ++G RA+RV+F +VSL LA+ A+ YFINHRY G  LW+++  P VH+A W T+F+SF+FLYPSTFN+LEVAAVDKP++HLWETG+ RITRHPQ  GQ LWC AH  W+G SF   TS GLMAHHLF  W+GDRRL+ +YG+ F+AV+ RTS+VPF AIL+GRQQLP DYWKEFAR PY  +   T+ AY  HP  Q  SY++
Sbjct:   65 SLSAYVKSLKNDEAQTELVGEDSAAFDLQKQTLQAWGLFFLLLSTVLGGLYEVWIQPGYGFADDYVRLLTSFTKDNTEATMLVILGVFAVAHSGLAGLRAKGEAVVGERAYRVVFALVSLSLAIVALVYFINHRYSGTPLWDLRGTPLVHEAVWATNFVSFLFLYPSTFNILEVAAVDKPKVHLWETGIIRITRHPQMVGQALWCLAHTLWIGNSFMVTTSLGLMAHHLFGCWHGDRRLRSRYGEAFEAVKSRTSIVPFAAILDGRQQLPKDYWKEFARVPYLAVTAFTVGAYLCHPLFQQASYFL 370          
BLAST of mRNA_P-littoralis_Contig66.120.2 vs. uniprot
Match: A0A2K1L979_PHYPA (NnrU domain-containing protein n=2 Tax=Physcomitrium patens TaxID=3218 RepID=A0A2K1L979_PHYPA)

HSP 1 Score: 397 bits (1020), Expect = 4.110e-133
Identity = 180/293 (61.43%), Postives = 224/293 (76.45%), Query Frame = 1
Query:  409 QSGLVGEDAAVFSFQEQSLKSWGSFLAVLGTVLTALYYLWLNPDTGYGDDFVRFLERAAGGDTTVTITLILGIFAVAHSGLASLRPKGEELIGARAWRVLFGIVSLPLAVTAVAYFINHRYDGVQLWNIKMVPGVHDACWITSFISFVFLYPSTFNLLEVAAVDKPQLHLWETGVTRITRHPQTFGQGLWCAAHLAWVGTSFAAVTSAGLMAHHLFSLWNGDRRLKDKYGDDFDAVQKRTSVVPFQAILEGRQQLPSDYWKEFARGPYFIIVGGTIAAYFAHPFMQAGSYYMH 1287
            Q  LVGEDAAVF+ + Q   SW  F  VLGTVL  LYY+WL+P+TGYG  F+  L   +     V +  IL +FA+ HSGLA LR  GE+L+G RA+RV F  +SLPLAV+AV YFINHRYDGVQLW ++ +PGVH+A W  SFISF FLYPSTFNLLEVAAVDKP++H+WETG+ RITRHPQ  GQ +WC AH  W+G+SF   TS GL+AHHLF +W+GDRRL  KYG+ F+ V++RTS++PF AIL+GRQ+LP DY+KEF R PY++IVG T+ AYF+HP MQ GS+ +H
Sbjct:  101 QPVLVGEDAAVFNVKSQKATSWIYFFLVLGTVLAILYYIWLDPNTGYGGAFIDALSSLSSNHEIVMLA-ILAVFALVHSGLAGLRASGEKLVGERAYRVFFAGISLPLAVSAVVYFINHRYDGVQLWQVRTIPGVHEAVWALSFISFFFLYPSTFNLLEVAAVDKPKVHMWETGIMRITRHPQMVGQFIWCLAHTLWIGSSFTLTTSFGLLAHHLFGVWHGDRRLSAKYGEAFERVKERTSIIPFAAILDGRQKLPEDYYKEFLRVPYYVIVGFTLGAYFSHPLMQLGSHILH 392          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig66.120.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FMZ6_ECTSI1.300e-19889.56NnrU domain-containing protein n=1 Tax=Ectocarpus ... [more]
A0A835Z2B9_9STRA3.360e-16771.10NnrU protein-domain-containing protein n=1 Tax=Tri... [more]
A0A7S3YAC1_HETAK2.760e-14365.51Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A8J4AM61_9CHLO8.780e-14064.83NnrU domain-containing protein n=2 Tax=Volvox TaxI... [more]
A0A7S4G126_9EUGL1.280e-13966.32Hypothetical protein n=1 Tax=Eutreptiella gymnasti... [more]
A0A0G4ECX7_VITBC7.370e-13965.28NnrU domain-containing protein n=2 Tax=Vitrella br... [more]
A0A835XZY9_9CHLO5.780e-13563.45NnrU domain-containing protein n=1 Tax=Edaphochlam... [more]
A0A6F8P139_EUGGR2.000e-13365.73Zeta-carotene isomerase n=1 Tax=Euglena gracilis T... [more]
A0A061R8M7_9CHLO2.850e-13357.84Zeta-carotene isomerase n=2 Tax=Tetraselmis sp. GS... [more]
A0A2K1L979_PHYPA4.110e-13361.43NnrU domain-containing protein n=2 Tax=Physcomitri... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig66contigP-littoralis_Contig66:385184..391412 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D7FMZ6
PFAMsNnrU
Model size1293
Max annot lvl2759|Eukaryota
KEGG rclassRC02636
KEGG koko:K15744
KEGG ReactionR09655
KEGG Pathwayko00906,ko01100,ko01110,map00906,map01100,map01110
KEGG ModuleM00097
Hectar predicted targeting categorysignal peptide
GOsGO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006629,GO:0006720,GO:0008150,GO:0008152,GO:0008299,GO:0008610,GO:0009058,GO:0009507,GO:0009536,GO:0009987,GO:0016119,GO:0016120,GO:0016853,GO:0016859,GO:0042214,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044424,GO:0044444,GO:0044464,GO:0046246,GO:0071704,GO:0090471,GO:1901576
Exons10
Evalue3.47e-200
EggNOG OGsCOG4094@1|root,2QSJ3@2759|Eukaryota
Ec32 ortholog descriptionconserved unknown protein
Ec32 orthologEc-25_002890.1
EC5.2.1.12
Description9,15,9'-tri-cis-zeta-carotene isomerase activity
Cds size1152
COG categoryS
BRITEko00000,ko00001,ko00002,ko01000
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig66.120.2prot_P-littoralis_Contig66.120.2Pylaiella littoralis U1_48polypeptideP-littoralis_Contig66 385184..391271 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791376.8486702-CDS-P-littoralis_Contig66:385183..3852511680791376.8486702-CDS-P-littoralis_Contig66:385183..385251Pylaiella littoralis U1_48CDSP-littoralis_Contig66 385184..385251 -
1680791376.8642168-CDS-P-littoralis_Contig66:385434..3855131680791376.8642168-CDS-P-littoralis_Contig66:385434..385513Pylaiella littoralis U1_48CDSP-littoralis_Contig66 385435..385513 -
1680791376.8774505-CDS-P-littoralis_Contig66:385897..3859581680791376.8774505-CDS-P-littoralis_Contig66:385897..385958Pylaiella littoralis U1_48CDSP-littoralis_Contig66 385898..385958 -
1680791376.8889747-CDS-P-littoralis_Contig66:386178..3863161680791376.8889747-CDS-P-littoralis_Contig66:386178..386316Pylaiella littoralis U1_48CDSP-littoralis_Contig66 386179..386316 -
1680791376.9037235-CDS-P-littoralis_Contig66:386542..3866041680791376.9037235-CDS-P-littoralis_Contig66:386542..386604Pylaiella littoralis U1_48CDSP-littoralis_Contig66 386543..386604 -
1680791376.9215684-CDS-P-littoralis_Contig66:386811..3868981680791376.9215684-CDS-P-littoralis_Contig66:386811..386898Pylaiella littoralis U1_48CDSP-littoralis_Contig66 386812..386898 -
1680791376.9337401-CDS-P-littoralis_Contig66:388230..3883591680791376.9337401-CDS-P-littoralis_Contig66:388230..388359Pylaiella littoralis U1_48CDSP-littoralis_Contig66 388231..388359 -
1680791376.9452338-CDS-P-littoralis_Contig66:388823..3889421680791376.9452338-CDS-P-littoralis_Contig66:388823..388942Pylaiella littoralis U1_48CDSP-littoralis_Contig66 388824..388942 -
1680791376.9626517-CDS-P-littoralis_Contig66:389517..3897261680791376.9626517-CDS-P-littoralis_Contig66:389517..389726Pylaiella littoralis U1_48CDSP-littoralis_Contig66 389518..389726 -
1680791376.9768405-CDS-P-littoralis_Contig66:391071..3912711680791376.9768405-CDS-P-littoralis_Contig66:391071..391271Pylaiella littoralis U1_48CDSP-littoralis_Contig66 391072..391271 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791376.9883704-UTR-P-littoralis_Contig66:391271..3914121680791376.9883704-UTR-P-littoralis_Contig66:391271..391412Pylaiella littoralis U1_48UTRP-littoralis_Contig66 391272..391412 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig66.120.2

>prot_P-littoralis_Contig66.120.2 ID=prot_P-littoralis_Contig66.120.2|Name=mRNA_P-littoralis_Contig66.120.2|organism=Pylaiella littoralis U1_48|type=polypeptide|length=384bp
MFHRTRLARVVLLLVTPCESFLAQTSTLGSGRAARLPAARSLLVPQGRLA
KLARKQDTLSMEAPGRRQRRGLLGNTLSMSVTELEDLQRQSGLVGEDAAV
FSFQEQSLKSWGSFLAVLGTVLTALYYLWLNPDTGYGDDFVRFLERAAGG
DTTVTITLILGIFAVAHSGLASLRPKGEELIGARAWRVLFGIVSLPLAVT
AVAYFINHRYDGVQLWNIKMVPGVHDACWITSFISFVFLYPSTFNLLEVA
AVDKPQLHLWETGVTRITRHPQTFGQGLWCAAHLAWVGTSFAAVTSAGLM
AHHLFSLWNGDRRLKDKYGDDFDAVQKRTSVVPFQAILEGRQQLPSDYWK
EFARGPYFIIVGGTIAAYFAHPFMQAGSYYMHI*
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mRNA from alignment at P-littoralis_Contig66:385184..391412-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig66.120.2 ID=mRNA_P-littoralis_Contig66.120.2|Name=mRNA_P-littoralis_Contig66.120.2|organism=Pylaiella littoralis U1_48|type=mRNA|length=6229bp|location=Sequence derived from alignment at P-littoralis_Contig66:385184..391412- (Pylaiella littoralis U1_48)
TGGTACTGTTGCGGTTACAGGTGCATGACCGCCGTGTTTGTATCTGTCTG TGTGTCCGTACTGGTGCACGCAGTCGCCGACGTAACGGTGCAACGATAAC ACAGCTTTGCAACAGTTTCAACTTTTAGGACCAGTTCAAACATGTTTCAC AGAACGCGGCTTGCACGCGTGGTGCTGCTGTTAGTCACTCCATGTGAGAG CTTTCTGGCCCAAACGAGCACCTTGGGCTCGGGACGCGCAGCTAGGTTGC CGGCAGCGCGCTCTTTGCTTGTTCCGCAGGGTAGGTTAGCTAAACTAGCA AGAAAACAAGACACCTTGTCCATGGAGGCCCCAGGAAGGAGGTGAGAAGC GGTGCCCGCAATACTGGTGAAGGTTTTGCTGAGTCAACTGCGATTTTAGT TCAGGAGCTATGATACCGTTCACAAACGGCGTGATCGTAACATGCGCAGG CGGCTAGCTCTCTCCTTCGGGTGCAGCTACGGCCGAAGATGTTGTTTGGG AACAGATGTGGACATCAACAACAGCAGCAGTGGATGGTGACGAAGTGCAG GCGCCCAGTGACTATTTAGCATCGCTAGAATACCGTATGTTCTGTTACGT GGCTTTGATTATCTCGCATTGTTTATGCAAGCACGCCCGTGTTACGTTCG CGTCTACATTTCCTTTCCTCTGATACGCTGTACAACATCATTTTCGATTC ATCGATAAGTTGCTTAACTTCTTGCAGTCAGCAGCAGTGTTCACCCCGCC ACTGCTGTCGGCGGACCGAGCGTCAAAAACTCGGTACAGTACCTCATGTC GCGCTTTATATTATCCACGTGGTTACGTGGTCGGAGGTTGTCATCATGTA ATCGGTGTTGAATAGGCGCCTTCAAGGTTCTACTTCGTACAGCAGTCAGC ATGCCCTTTTAAAACGCTGTCGGCCTCCGCGAGAACCCCTACTGAACTTG CTGTGATCACACAAGCACAGCGTATGTAGAGAACACACACCTAGAGGACC CGGCACTACTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGAG AATCCAAGTCTGACGATGCGTACGAATGTACAGCTTGTGTTTCCTCAAGA AATCTGGATTAAATCGGAGGCACCAAAACAACAAAATGTTTGACACCCCC GAAAGAAAGAAGTCGACTCGGGTCAACTGGACTTCCAAAACTTTCCTCGT GTACAGAGTTATGATACAGTACTCTTTCGTTTTTCAGGCCTCCCCGTACT TTCTGGCCTTTTTCAAACTCACGCTTTGTTTTCCTTTCTTCTTTTTTGAT GCAGAAACGACATCTAAGACACTTGCTGATTCATACTACAGCAGCAGTGC AGTTGTTCGATCCTTGATGACCCTCTCTGCCCATGATTCCCCCCCTCTCT TGAGCAACAGGGCGGGTGGGCGGGAATATCGATCGAGTCTCGGACGATTC TCTTTTTTCTCCCAGCACCGCTGCTTACTACGATCTGCCATGTTATCGTA GACTTCCTTCTATCTCTCTCACGTTCTCTGCGGTGTACGGCACGTGCCTG CAGGCTGGCTCTCTTGCTTGTTTGCTTGTCTACTACGTTGCGTCCCTTTG ACCCCTAAAATTTCATAAACGCCTCCACAACGGATTCTACGTACGTACGA ATCGTACCGTTTCGTCGGGTTTACATTCGGAACCAGACAACGCAGAGGGT TGTTGGGGAATACGCTTTCAATGTCAGTGACGGAGCTCGAGGACTTGCAG CGTCAGTCTGGCCTCGTCGGAGAGGACGCTGCAGTTTTTTCGTTCCAAGA GCAGAGCCTGAAGAGCTGGGGGTCATTTCTAGCCGTACTTGGAACGGTGT TGACGGCCCTGTACTACCTGTGGCTCAATCCAGATACTGGGTATGGTGAG TTGTTCTCGCCGATTAGAGGCCTCTTCAGACAGAAACGTTCAGGTGCTGT TTGTCAAGTTAGCTCGCGTAGACGTAGACCGGTGGTCCCAACACAGGCGC ATCAACTGCTAGAAATATTGTTTGCGTACTATTTACACTTTTCATCGGCT GAGTTTGGTCGCAGCAGGATATTATTTATGCTGTACACTCCACATTTTTC TGCACGATGTCGGCGCGATTTGCTTCACGGTACGTCTTTTCCGATGAGGA ACTCATCTGCCCGGTCTACCCAGCCCACTTCACCCCTTTGCTTCTGTGTG GGCTCGTTGACGCGAGCCTGAAAGTACTCTTTGTAATTGATCCAAGTATC GAGTCTAGGGGCACCAGTGTTTGTGGTGTAAATATGTCCAAATGAGACAG CCACACGATTCTTATTCTACTTTGGAGTACTATTTCAGAGGGAACAAGAG ATTTCACCTAGGGGCGTGAAACCATACGTACGGATACAAGGAAAGTCATA GCATAGGTGAGGAGTATCTCCATTTGTTTGCACAGTCTGTCTTCCCGCCG TGCGCGTTGCTTTCGACCAGGGGACGACTTCGTTCGGTTCTTGGAACGAG CTGCTGGAGGAGACACCACGGTCACCATCACACTCATACTCGGCATCTTT GCCGTCGCTCACAGTGGTTTGGCAAGCCTCCGGCCGAAGGTACTCAAGAA CATCTGTTAGTGTTTAACTGCGTGTTTAATGAAGCGGAAAAGTGGAGGTT CGGGAAACCTGCGTCCTTGCCTTTTGGGCGCATTGTCTTCTTGCGTACGC TTCGTGCCTTGTGAGGACCTTCCGTCGTGCGTGCTACTCTCGGGATTCCG TCTTTCGGGCGCGAAACGTTCTTTCGGGAGAATTAGTGAGTTGAACATCT CCCCCCAACAACTCTTTCAACTTACTTTGTCTCAACAGCTGTAATTTATA AATCATGCCCAACGTTTCGCAATTCCAAAGCGAGTACCGTTTCTATAGCT TGTGATACTTTGACCCCTACTTGTAGACTATTATGATCCGTAATGGGTCG TAAACACGGTGTGTCGAAAATTTCGTTGAAGAACTCCCCAAGCCATGGGG GCGTAGTCTAATGTAGCGCTGACCCGCACGCTTGACTGCGTGCACCCATA CAGGGCGAGGAGCTGATCGGCGCACGCGCATGGAGGGTGCTTTTCGGTAT TGTGTCTCTTCCTTTGGCGGTTACTGCCGTGGCGTATTTCATCAACCACC GCTATGACGGGGTGCAGCTGTGGAACATAAAGGTGGCCAATTTGATTCGA AACAGCCCTCCCGATTTTTTCCGAACATTCGCACGCTCAAGGTGTTGTAC TCCTTTATATGGCATTAGTTTATTGCACACTCTAGAAAGCGGTATACCGT CTGGTTTCCGCGCCACAACGCGGCACACCAAAATACATCTTAGCATATAA GCCCCGTTCGCGTCGCTGAGTGGCCGATTAAGCCTCGTAACGATTTGTGG CACCAACCGTGGGCGGTACATCACATCTGGGTTTCTCAGGTCGGCTGTCA CCGCTTTCTAGCGCTACCCGTATCGCTTTCTGGCGGGAATTCTTCAGGCC ATTCATCCAACAGCCTTTGGCACTCCCACATCACACATGAACCAAGGAAG CTACGTCACCCAGTGCCCACATATGTCCCATGATGGCCTATTGATACCCC CTAAAGAAGGTAAATAAGGACGGTGCCCGTGTGAGGCCCTAAAAAGTGAA CATTGTGATTTACAACAAACAACTGTGTACTATCCAGGCCCATGCCAATA CGCAAAGCAATGTACATGTATCCAAGTCTGCCAATCCGGTGCATGTCTTG TGTGGTTGTGTTTGCGGGGGCGCGAGTTTTGTCCGTAGTCGCTCTTGTTC CAGTGAGGGGCAGCACCAGTACGGGCATGTGTGTCAGTCGGGTGCTCATC GTCTACTCTACTGTTCTACTTTTACAGCAACAGCAGTGGTAATTGCTCTG GTTTTCTTGCCAGCTTCTTGCAGAGCACAGCAGAAGCACGCATGAGCTTG CAGCAAGCTGTAAGGTCCCGATGCGGTCGGGTGCAGAGAACGTGCTAAGA GGTTCTCCACCAACAACGGACCGAGGGTGCTGGTATCTTAAGTGGCCCCA TGCGGGTACTAGGTGACGTGGTTTCCTTGGGTGATGTGTGAGTTGGAAGT GTCGACGGCTGTTGGGTGGCTGGCCTGGAGGATATCCAGCCAGAAAGCGG TACGGGTCGCGCCAAAAAAGCGGTGACAGCCGATCTGAGAAGCCCACCTG TGATGTACCGCCTAGTGCTGGTCCCACAAAGCGTTACGACGCTTAATCGG CTAATCAACGACCCAAACTGGCCTCATATGCCAAGGTGTATTCCGTGAGC CACTTTGTGGCGCGGAAACCAAGCGGTATACTGTACCGCTTTCTGGCGTC TGCCCTGCTTTGAAAGTTCGATACAAATGGACTTCCGCTGTTGCACCTCA ACGCGAATGCTTGGCTGTGAAGGCTGCGAAGTGTTTCACGCGTATCCATG GGCGAGGGGCGTTGCTTTGTTTATAAACTAATATGGCCAATCTGTCTCAA TTTTAACTGCATAGATGGTACCTGGCGTCCATGATGCCTGCTGGATCACT TCCTTCATCTCGTTCGTGTTCCTGTACCCCAGCACATTCAATCTTCTTGA GGTGAGGAAACGGTTCTCCACTTTCCTTCATGTTGAGCGCGTAGCACACC ATCTGACCCGAGAACGGTTTTCTGTGAAATGGGATCATCTCACGACAGGA ACTTCTGTGCACACTCGGCACGACTGCATCTCCTCCGTAACCCGACCTGG TGTTCTATTCCCATCCGCATTGTACAACCTGATTTGTTGTGTGGCGTGTC CGTCTTAGGTTGCGGCCGTAGACAAACCTCAACTTCACCTGTGGGAGACA GGGGTTACTCGCATCACAAGGTGGGACCCTGGTTGCCGAATCGCCCTTGG CATTGGCACCTACTGCAGGCAAAATCCTCCCAAAATTGTCAACCTTGTGG CGTATCCCCTAAGAATAAGACGAATGACAGGACAACGTCACTTACCATGC CATGTACCGTGGTTCATGGGTAAATTTGGTTCTGCTGAGGAACAATGGAA ATTCTCTCCTCTCTACTGGCTGTCGTGTATCTTCTTTTTTTACAAGACAC CCCCAGACGTTTGGGCAGGGTTTGTGGTGCGCTGCACACCTGGCATGGGT TGGGACGTCCTTCGCAGCAGTAACTTCTGCTGGGCTCATGGCGCACCATC TATTTTCGTTGTGGAATGGAGATCGCCGCCTCAAGTAAGTTTTGACAAGT CGCACACAATCGGTCCTACGTGGAGCGCACGGCAGCCGGCACATGCCTTC TACTGCTGTGGGGAATACCTTTTTTGTTTGCATGGTCCCATTATCACAGC AGGCTGTATAATCGCCATTTTCACCTCGAAATTAGCGTGCTTCACTCCGC CGACCTTTGTCATGGTCGCATCTTCGGTCGTTGTCTTTGCTAATGGCTAT TCAGGGACAAGTACGGCGATGACTTTGACGCCGTGCAAAAACGCACCAGT GTAGTTCCGTTCCAGGTGAGTGGTGCTTTGTTTCTCGCCTACAGCTGATC TGCCGGAGGGTTTGATGACTTGTGTTGCGATGCGAAGCTCTTCGAGCTAT AAATTCAAGTGACGGAGCACCTTTCCAACAGTCACATTGCAGGCGTCTCA GTTCATGGCATTTGATACGTCATATTTGTGGAGTGGATGGAAAACCATGA GTTATTTGTGTTGATGCATAACCTGTCGGGTTTGATGAACGCAAGCGTGA AAACAATTTGATGAGGATCCTGGCCATCCGTCAAATTTGTCATGAACATT TCCATGTTTGATCCGAACACAGCATTGGCAGTGCCTACGTCTTCCAACAC ATACCTTTGCACGAACATCGTTCCCACCTTCGTCGACCGTACCCAACAGG CCATACTAGAGGGCAGGCAACAACTTCCGAGTGACTACTGGAAGGAATTC GCGCGGGGGCCGTACTTCATAATTGTCGGTGAGGGCGTACATGATGGTGC TTTGTTTTTCAGGGTCTCAGCCGGCTTTCATGAGCACTTTCACGTTGCTT GCGTTCACCCGGTTATAACTGTCGCGCCCCTAAAAAGTTGCGAATGCGAA GACGTGCAGGTGTAACCCATTGCATACACTTTCCCCCGTTCCCGTTCATC AAAATCTGCAGGTGGCACCATCGCAGCATACTTTGCGCACCCCTTCATGC AAGCGGGCAGCTACTATATGCACATATGA
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Coding sequence (CDS) from alignment at P-littoralis_Contig66:385184..391412-

>mRNA_P-littoralis_Contig66.120.2 ID=mRNA_P-littoralis_Contig66.120.2|Name=mRNA_P-littoralis_Contig66.120.2|organism=Pylaiella littoralis U1_48|type=CDS|length=1152bp|location=Sequence derived from alignment at P-littoralis_Contig66:385184..391412- (Pylaiella littoralis U1_48)
ATGTTTCACAGAACGCGGCTTGCACGCGTGGTGCTGCTGTTAGTCACTCC
ATGTGAGAGCTTTCTGGCCCAAACGAGCACCTTGGGCTCGGGACGCGCAG
CTAGGTTGCCGGCAGCGCGCTCTTTGCTTGTTCCGCAGGGTAGGTTAGCT
AAACTAGCAAGAAAACAAGACACCTTGTCCATGGAGGCCCCAGGAAGGAG
ACAACGCAGAGGGTTGTTGGGGAATACGCTTTCAATGTCAGTGACGGAGC
TCGAGGACTTGCAGCGTCAGTCTGGCCTCGTCGGAGAGGACGCTGCAGTT
TTTTCGTTCCAAGAGCAGAGCCTGAAGAGCTGGGGGTCATTTCTAGCCGT
ACTTGGAACGGTGTTGACGGCCCTGTACTACCTGTGGCTCAATCCAGATA
CTGGGTATGGGGACGACTTCGTTCGGTTCTTGGAACGAGCTGCTGGAGGA
GACACCACGGTCACCATCACACTCATACTCGGCATCTTTGCCGTCGCTCA
CAGTGGTTTGGCAAGCCTCCGGCCGAAGGGCGAGGAGCTGATCGGCGCAC
GCGCATGGAGGGTGCTTTTCGGTATTGTGTCTCTTCCTTTGGCGGTTACT
GCCGTGGCGTATTTCATCAACCACCGCTATGACGGGGTGCAGCTGTGGAA
CATAAAGATGGTACCTGGCGTCCATGATGCCTGCTGGATCACTTCCTTCA
TCTCGTTCGTGTTCCTGTACCCCAGCACATTCAATCTTCTTGAGGTTGCG
GCCGTAGACAAACCTCAACTTCACCTGTGGGAGACAGGGGTTACTCGCAT
CACAAGACACCCCCAGACGTTTGGGCAGGGTTTGTGGTGCGCTGCACACC
TGGCATGGGTTGGGACGTCCTTCGCAGCAGTAACTTCTGCTGGGCTCATG
GCGCACCATCTATTTTCGTTGTGGAATGGAGATCGCCGCCTCAAGGACAA
GTACGGCGATGACTTTGACGCCGTGCAAAAACGCACCAGTGTAGTTCCGT
TCCAGGCCATACTAGAGGGCAGGCAACAACTTCCGAGTGACTACTGGAAG
GAATTCGCGCGGGGGCCGTACTTCATAATTGTCGGTGGCACCATCGCAGC
ATACTTTGCGCACCCCTTCATGCAAGCGGGCAGCTACTATATGCACATAT
GA
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