mRNA_P-littoralis_Contig659.16.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig659.16.1 vs. uniprot
Match: D8LTK2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LTK2_ECTSI) HSP 1 Score: 523 bits (1347), Expect = 7.920e-178 Identity = 327/511 (63.99%), Postives = 362/511 (70.84%), Query Frame = 1
Query: 1 RPTPNTPRRERPTRATVVAATPKSPAVLPTPRSPMAVAARAVSLEESVRSTLRMKRAADAIALEDAQLRADAERQERRNNPSGNRNSPAARTRPEPERXXXXXXXXXXXXXXXXXEKIRIRALRAFAAREEAEIERDRALELTLEVLRRKRADKRRGVSRAHSAPGRKRALSPPRKSRRPEDRRTSLARRVKDSAARSCGLSPSQVLLLRRSRQLGREDDKRKTASDRRTEDLAQPKEERPATRARNPATEGLVAELTRTMTDKEKRAFLHACLEDAKECTHRPNTRSAAAXXXXXXXXXXXXXXXXXXXXX-----ATNTDAFLCRMEAQERAKATAMEHRRGELAYKAVLDKRVCPGCGAEQSYDEVQEKRKTCPNCEVEYRRPRTWTGVRKDFLDRVEAFQELKRESLQAAIDYQKRQMRTLALGGRYRAPNADTDSENEMDERERLYWEDIEDDFVSRLREDAARRQAALESRSATMHQDWTFQPTLSAASERVVGDSAWAGMSFLE 1518
RP TPRR P R AA SP + TP SP+AVAAR +S EESVRSTLRMKRAA+AIALEDA++ A+ + QE X EK+R+RALRA AAREEAEI+RDRALELTLEVLRRK ADKRRGVS SAP KRA SPPRKS+RP+D RT+LARRVKDSAARSCGLS +QVLLLRRSR+LGRE D +T S+RRTE LAQPKE RPATR RN ATE LV ELT+TMTDKEKRAFLHACL DAKECTHRP TRSAAA + DAFL RM AQERAK AMEHRRGELAYKAVLDKRVCPGCGAEQSYDEV+EKRK C NCE EYR+P+TW VRKDFL+RVEAFQE KRE++QAA + +MRT ALG A ERERL+WEDIEDDFV RL+EDAARRQ +LESRSA ++QDWTF+PTLSAASERVV +SAWAG SF E
Sbjct: 17 RPPALTPRRYGPKRGVSAAAA--SPVLPTTPGSPVAVAARVISQEESVRSTLRMKRAAEAIALEDARILAEVKHQEXXXXXXXXXXXXXXXXXXXXXXXHGDDPAKEEDARARKAEKMRVRALRALAAREEAEIDRDRALELTLEVLRRKHADKRRGVSTIPSAPAYKRAHSPPRKSKRPDDHRTTLARRVKDSAARSCGLSQAQVLLLRRSRKLGREGDAPRTVSERRTEQLAQPKEHRPATRTRNSATEALVEELTKTMTDKEKRAFLHACLADAKECTHRPYTRSAAAAARHRKGGAGDGATGGGEEAKDGSGPGASIDAFLYRMGAQERAKNAAMEHRRGELAYKAVLDKRVCPGCGAEQSYDEVEEKRKICXNCEAEYRKPKTWASVRKDFLNRVEAFQESKREAVQAAT---QSRMRTFALGSHRSYDGA---------ERERLFWEDIEDDFVYRLQEDAARRQESLESRSAALYQDWTFRPTLSAASERVVDESAWAG-SFSE 512
BLAST of mRNA_P-littoralis_Contig659.16.1 vs. uniprot
Match: A0A6H5JHI1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHI1_9PHAE) HSP 1 Score: 437 bits (1125), Expect = 6.580e-144 Identity = 299/569 (52.55%), Postives = 335/569 (58.88%), Query Frame = 1
Query: 4 PTPNTPRRERPTRATVVAATPKSPAVLPTPRSPMAVAARAVSLEESVRSTLRMKRAADAIALEDAQLRADAERQERRNNPSGNRNSPA---------------------ARTRPEPERXXXXXXXXXXXXXXXXXEKIRIRALRAFAAREEAEIERDRALELTLEVLRRKRADKRRGVSRAHSAPGRKRALSPPRKSRRPEDRRTSLARRVKDSAARSCGLSPSQVLLLRRSRQLGREDDKRKTASDRRTEDLAQPKEERPATR-------------------------------------------ARNPATEGLVAELTRTMTDKEKRAFLHACLEDAKECTHRPNTRSAAAXXXXXXXXXXXXXXXXXXXXX-----ATNTDAFLCRMEAQERAKATAMEHRRGELAYKAVLDKRVCPGCGAEQSYDEVQEKRKTCPNCEVEYRRPRTWTGVRKDFLDRVEAFQELKRESLQAAIDYQKRQMRTLALGGRYRAPNADTDSENEMDERERLYWEDIEDDFVSRLREDAARRQAALESRSATMHQDWTFQPTLSAASERVVGDSAWAG 1503
P P TPRR P R AA +P + TP SP+AVAAR +S EESVRSTLRMKRAA+AIALEDA++ A+ +RQE AR R EK+R+RALR AAREEAEI++DRAL LTLEVLRRK ADKRRGVS S PG KRA SPPRKSRRP++ RT+LARRVKDSAAR CGLS +QVLLLRRSR+LGRE D +T S+RRTE LAQPKE RPATR +RNPAT+ LV ELT+TMTDKEKRAFLHACL DAKECTHRP TRSAAA + DAFL RM+AQERAK AMEHRRGELAYKAVLDKRVCP CGAEQSYDEV+EKRK E EYR+P+TW VRK +RT ALG A E ERL+WEDIEDDF RL+ DAARRQA+LESRSA ++QDWTF+PTLSAASERVV +SAWAG
Sbjct: 15 PPPPTPRRYGPKRGASAAAV--APVLPTTPGSPIAVAARVISQEESVRSTLRMKRAAEAIALEDARILAEVKRQEXXXXXXXXXXXXXXXXXXRTXXXXXXXXXXXXEDARARGSLPSNPMSCCTLCPCMTKKQAEKMRVRALRVLAAREEAEIDQDRALALTLEVLRRKHADKRRGVSTLPSVPGNKRAHSPPRKSRRPDNHRTTLARRVKDSAARLCGLSQAQVLLLRRSRKLGREGDAPRTVSERRTEQLAQPKEHRPATRTRCGRVMTLVSSSNTSVAALAAREVQMKTRWYLVVRRQLASKVSRNPATDALVEELTKTMTDKEKRAFLHACLADAKECTHRPYTRSAAAVARHRRGGAGDGATGGGEEAKDGSGPGASIDAFLYRMDAQERAKNAAMEHRRGELAYKAVLDKRVCPDCGAEQSYDEVEEKRKIXXXXEAEYRKPKTWASVRK---------------------------IRTFALGSHRSYDGA---------EGERLFWEDIEDDFFCRLQHDAARRQASLESRSAALYQDWTFRPTLSAASERVVDESAWAG 545
BLAST of mRNA_P-littoralis_Contig659.16.1 vs. uniprot
Match: A0A482S3J2_9ARCH (Uncharacterized protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482S3J2_9ARCH) HSP 1 Score: 112 bits (281), Expect = 1.030e-22 Identity = 80/266 (30.08%), Postives = 125/266 (46.99%), Query Frame = 1
Query: 799 RAFLHACLEDAKECTHRPNTRSAAAXXXXXXXXXXXXXXXXXXXXXATNTDAFLCRMEAQERAKATAMEHRRGELAYKAVLDKRVCPGCGAEQSYDEVQEKRKTCPNCEVEYRRPRTWTGVRKDFLDRVEAFQELKRESLQAAIDYQKRQMRTLALGGRYRAPNADTDSENEMDERERLYWEDIEDDFVSRLREDAARRQAALESRSATMHQD-WTFQPTLSA-----------ASERVVGDSAWAGMSFLERVEGDLQRRREAAP 1560
R + LE+A+ECT RP+ RSA +F+ R EA+ER + ++ + G+ Y A++DK+VCP CGA+QSYDEV+EKRK C NC VEY P TW VR F + + F + QA ++ +R+ + + +A + M R + E+ E +F R+ E + A L+ ++++ ++F+PT+ AS D +FL+R E D+ RRE P
Sbjct: 259 RTLRYLTLEEAQECTFRPHLRSAQKKNNREQREDDGAKEDPRF--------SFISRQEAEERNRREELQFKMGKKDYDALVDKKVCPQCGAKQSYDEVKEKRKLCVNCRVEYTNPMTWAKVRNKFWKKCQEFSKRVALHKQAIMEEIEREYKFIIK----KAVDEQGKVVEVMVPRSHILTEEEEQEFFRRIEEKLLEKDAKLKRLDRELYEEKYSFKPTVKQYKSDNRDSDDDASNAYSDDEKNVVQAFLQRYEEDMDYRREKLP 512
BLAST of mRNA_P-littoralis_Contig659.16.1 vs. uniprot
Match: W2PTR4_PHYPN (Uncharacterized protein n=11 Tax=Phytophthora TaxID=4783 RepID=W2PTR4_PHYPN) HSP 1 Score: 105 bits (261), Expect = 3.930e-20 Identity = 75/255 (29.41%), Postives = 123/255 (48.24%), Query Frame = 1
Query: 790 KEKRAFLHACLEDAKECTHRPNTRSAAAXXXXXXXXXXXXXXXXXXXXXATNTDAFLCRMEAQERAKATAMEHRRGELAYKAVLDKRVCPGCGAEQSYDEVQEKRKTCPNCEVEYRRPRTWTGVRKDFLDRVEAFQE-LKRESLQAAIDYQKRQMRTLALGGRYRAPNADTDSENEMDERERLYWEDIEDDFVSRLREDAARRQAALESRSATMHQDWTFQPTLSAASERV-VGDSAWAGMSFLERVEGDLQRRR 1548
K +R F A L+D + C P ++ + + F+ RMEA ERA+ + R E AY +DK+ CP CG QSY E+ +KRK CPNC V Y+ W+ V KDFL R+E FQ+ K + ++++++++ L + DSE+ + WEDI D+F+ RL+ D R+ + + + ++ +F P+++ ++++ +GD F ER DL RR
Sbjct: 274 KPRREF--ARLDDNRHCRFTPRLHHSSIKKTPKNDSDDEDDRGESRDATSRRNEDFIRRMEAAERARREQLRRTREEAAYLDRVDKKECPSCGNPQSYSELTQKRKKCPNCGVTYKSRIAWSDVAKDFLTRMEEFQQQCKDRQREKQEEFERQELQNCKL---------EDDSEDT-----KKTWEDIRDEFLGRLQLDLEYREMSRAAIWEEIQRECSFSPSITRRAQQLELGD-------FEERYRRDLDERR 505
BLAST of mRNA_P-littoralis_Contig659.16.1 vs. uniprot
Match: A0A8K1C584_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1C584_PYTOL) HSP 1 Score: 104 bits (259), Expect = 6.300e-20 Identity = 73/254 (28.74%), Postives = 122/254 (48.03%), Query Frame = 1
Query: 790 KEKRAFLHACLEDAKECTHRPNTRSAAAXXXXXXXXXXXXXXXXXXXXXATNTDAFLCRMEAQERAKATAMEHRRGELAYKAVLDKRVCPGCGAEQSYDEVQEKRKTCPNCEVEYRRPRTWTGVRKDFLDRVEAFQELKRESLQAAIDYQKRQMRTLALGGRYRAPNADTDSENEMDERERLYWEDIEDDFVSRLREDAARRQAALESRSATMHQDWTFQPTLSAASERV-VGDSAWAGMSFLERVEGDLQRRR 1548
++ R ++A L+DA+ C +P + T+ F+ RMEA ER + + R E Y A++DK+ CP CG QSY E+ +KRK CPNC V YR W + +FL+R+ A L+ +++Q+RQ G + S N+ + W+ ++D+F+ R++ D +R+ + + + Q+ TFQP +S ++R+ +GD F ER+ DL+ RR
Sbjct: 250 EKTRRPVYAKLDDARHCRFKPRLKGTNQSSSRANDSDDDGDNQ--------RTEDFIRRMEATERVRTETIRRTRAEREYNALVDKKECPQCGNPQSYAELTQKRKKCPNCGVTYRSRLAWCEIADEFLERMAAH-------LRTRLEWQQRQKEDAEGGAK---------SNNQKQPAPKT-WQHVQDEFLGRVQLDMMQRELSKDLILQELTQECTFQPVISDRAKRLQLGD-------FDERLRRDLENRR 471
BLAST of mRNA_P-littoralis_Contig659.16.1 vs. uniprot
Match: A0A812W580_SYMMI (Hypothetical protein n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812W580_SYMMI) HSP 1 Score: 102 bits (255), Expect = 9.420e-20 Identity = 70/198 (35.35%), Postives = 99/198 (50.00%), Query Frame = 1
Query: 799 RAFLHACLEDAKECTHRPNTRSAAAXXXXXXXXXXXXXXXXXXXXXATNTDAFLCRMEAQERAKATAMEHRRGELAYKAVLDKRVCPGCGAEQSYDEVQEKRKTCPNCEVEYRRPRTWTGVRKDFLDR---VEAFQELKRESLQAAIDYQK---RQMRTLALGGRYRAPNADTDSENEMDERERLYWED-IEDDFVSR 1371
+ +++ DAK CT RP T + A +TD FL R EA+ RA+ +E G+ Y+A++DKR CP CGA+QSYDEV+EKRK CPNC VEYRR +W V DF R A K+E L+ ++ ++ R+ R A G+ + S N L W +E++F+SR
Sbjct: 233 KTMVYSSYSDAKNCTFRPRTNESRRKAQQAVDTDEAE---------AKHTDNFLSRQEAKHRARLDDLEFNMGKKDYEALVDKRYCPSCGAKQSYDEVKEKRKRCPNCNVEYRRKISWGDVGSDFYKRQSKASAQYHKKQEELRKSLRQKEMVVRRKRVDAKTGKLIVEDVSVTSSN-------LKWTPAMEEEFLSR 414
BLAST of mRNA_P-littoralis_Contig659.16.1 vs. uniprot
Match: D0NU37_PHYIT (Cleavage induced predicted protein n=2 Tax=Phytophthora infestans TaxID=4787 RepID=D0NU37_PHYIT) HSP 1 Score: 102 bits (254), Expect = 2.760e-19 Identity = 67/200 (33.50%), Postives = 108/200 (54.00%), Query Frame = 1
Query: 955 FLCRMEAQERAKATAMEHRRGELAYKAVLDKRVCPGCGAEQSYDEVQEKRKTCPNCEVEYRRPRTWTGVRKDFLDRVEAFQELKRE-SLQAAIDYQKRQMRTLALGGRYRAPNADTDSENEMDERERLYWEDIEDDFVSRLREDAARRQAALESRSATMHQDWTFQPTLSAASERV-VGDSAWAGMSFLERVEGDLQRRR 1548
F+ RMEA ERA+ + R E AY A +DK+ CP CG QSY E+ +KRK C NC V Y+ W+ V KDFL R+E FQ+ +++ L+ +Y++++++ Y P D E R W+DI D+F+ RL+ D R+ + + + ++ +F P+++ ++++ +GD F R DL RR
Sbjct: 313 FVRRMEASERARREQLRRTREEAAYLARVDKKECPSCGNPQSYSELTQKRKKCXNCGVTYKSRIAWSDVAKDFLTRMEEFQQQRKDRQLEKQEEYERQELQ-------YCKPEDDN-------EDTRKTWQDIRDEFLGRLQLDLEYREMSRAAIWEEIQRECSFSPSITRRAQQLELGD-------FEARYRRDLDERR 491
BLAST of mRNA_P-littoralis_Contig659.16.1 vs. uniprot
Match: A0A0P1APG7_PLAHL (Uncharacterized protein n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1APG7_PLAHL) HSP 1 Score: 100 bits (248), Expect = 1.430e-18 Identity = 71/253 (28.06%), Postives = 114/253 (45.06%), Query Frame = 1
Query: 790 KEKRAFLHACLEDAKECTHRPNTRSAAAXXXXXXXXXXXXXXXXXXXXXATNTDAFLCRMEAQERAKATAMEHRRGELAYKAVLDKRVCPGCGAEQSYDEVQEKRKTCPNCEVEYRRPRTWTGVRKDFLDRVEAFQELKRESLQAAIDYQKRQMRTLALGGRYRAPNADTDSENEMDERERLYWEDIEDDFVSRLREDAARRQAALESRSATMHQDWTFQPTLSAASERVVGDSAWAGMSFLERVEGDLQRRR 1548
++K F A +D + C P + ++ D F+ RMEA ERA+ + R E AY LDK+ C CG QSY E+ +KRK CPNC V YR W+ V K+FL R+E FQ+ +E + + +RQ P D +S + W+++ D+F+ RL+ D R+ + + + ++ +F P+++ ++ + D F ER+ DL RR
Sbjct: 240 QQKDLFEFARFDDERHCRFHPRLHNYSSKKASQSSPDDEGGRVGDKVDFHRLNDNFIRRMEAGERARQEQLRRTREEAAYSCRLDKKECHTCGNTQSYSELTQKRKKCPNCGVTYRSRIVWSDVAKEFLSRMEEFQKQYKERHREKQEEYERQEELACT------PKQDVESSKKT-------WDEVRDEFLGRLQLDMEYREMSRAAIMEEIQRECSFSPSITRRAQMLKLDE------FDERMRRDLIGRR 473
BLAST of mRNA_P-littoralis_Contig659.16.1 vs. uniprot
Match: A0A2D4C469_PYTIN (Uncharacterized protein (Fragment) n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4C469_PYTIN) HSP 1 Score: 100 bits (250), Expect = 1.590e-18 Identity = 87/265 (32.83%), Postives = 122/265 (46.04%), Query Frame = 1
Query: 766 ELTRTMTDKEKRAFLHACLEDAKECTHRPNT-RSAAAXXXXXXXXXXXXXXXXXXXXXATNTDAFLCRMEAQERAKATAMEHRRGELAYKAVLDKRVCPGCGAEQSYDEVQEKRKTCPNCEVEYRRPRTWTGVRKDFLDRVEAFQELKRESLQAAIDYQKRQMRTLALGGRYRAPNADTDSENEMDERERLYWEDIEDDFVSRLREDAARRQAALESRSATMHQDWTFQPTLSAASERVVGDSAWAGMSFLERVEGDLQRRREAA 1557
E R + R +A L+D + C RP RS A XXXXXXXXXX T F+ RMEA ER + + R E Y A +DK+ CP CG QSY E+ +KRK CPNC V YR W+ + +FL+R+ E +RQ R E W + D+F+ R++ D +R+ E + + TF+P +SA ++R+ A +G F ER+ DL+RRR+ A
Sbjct: 593 EQRRMLRGSHSREARYAKLDDERHCRFRPKVKRSDGASGRSRGRDXXXXXXXXXXGGREQGTQDFIRRMEATERVRVEQLRRTRAEREYNARVDKKECPACGNPQSYTELTQKRKKCPNCGVSYRSRLAWSEIADEFLERMAQHLET------------RRQWRQXXXXXXXXXXXXXXXXXXXXXXXEPKTWALVRDEFLGRVQLDLLQRELTKELILKELESECTFRPMISARAQRM----ALSG-DFDERLRRDLERRRQRA 840
BLAST of mRNA_P-littoralis_Contig659.16.1 vs. uniprot
Match: G4ZM67_PHYSP (Uncharacterized protein n=1 Tax=Phytophthora sojae (strain P6497) TaxID=1094619 RepID=G4ZM67_PHYSP) HSP 1 Score: 99.4 bits (246), Expect = 3.060e-18 Identity = 69/199 (34.67%), Postives = 106/199 (53.27%), Query Frame = 1
Query: 955 FLCRMEAQERAKATAMEHRRGELAYKAVLDKRVCPGCGAEQSYDEVQEKRKTCPNCEVEYRRPRTWTGVRKDFLDRVEAFQELKRESLQAAIDYQKRQMRTLALGGRYRAPNADTDSENEMDERERLYWEDIEDDFVSRLREDAARRQAALESRSATMHQDWTFQPTLSAASERV-VGDSAWAGMSFLERVEGDLQRRR 1548
F+ RMEA ERA+ + R E AY A +DK+ CP CG QSY E+ +KRK C NC V Y+ W+ V K+FL R+E FQ+ +E + + +RQ AL R P D +E + WED+ D+F+ RL+ D R+ + + ++ +F P+++ ++++ +GD F ER+ DL RR
Sbjct: 340 FVRRMEAAERARREQLRRTREEAAYLARVDKKECPSCGNPQSYSELTQKRKKCXNCGVTYKSRIAWSDVAKEFLTRMEEFQQSCKERQRERQEESERQE---ALSCR---PEDD-------EEDAKKTWEDVRDEFLGRLQLDLEYREMSRAVIWEEIQRECSFSPSITRRAQQLEIGD-------FDERLRRDLDERR 518 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig659.16.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 23
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig659.16.1 >prot_P-littoralis_Contig659.16.1 ID=prot_P-littoralis_Contig659.16.1|Name=mRNA_P-littoralis_Contig659.16.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=513bp MAVAARAVSLEESVRSTLRMKRAADAIALEDAQLRADAERQERRNNPSGNback to top mRNA from alignment at P-littoralis_Contig659:130193..138491- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig659.16.1 ID=mRNA_P-littoralis_Contig659.16.1|Name=mRNA_P-littoralis_Contig659.16.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=8299bp|location=Sequence derived from alignment at P-littoralis_Contig659:130193..138491- (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig659:130193..138491- >mRNA_P-littoralis_Contig659.16.1 ID=mRNA_P-littoralis_Contig659.16.1|Name=mRNA_P-littoralis_Contig659.16.1|organism=Pylaiella littoralis U1_48|type=CDS|length=1539bp|location=Sequence derived from alignment at P-littoralis_Contig659:130193..138491- (Pylaiella littoralis U1_48)back to top |