mRNA_P-littoralis_Contig656.12.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig656.12.1 vs. uniprot
Match: A0A6H5KQL9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQL9_9PHAE) HSP 1 Score: 289 bits (739), Expect = 3.010e-96 Identity = 144/165 (87.27%), Postives = 147/165 (89.09%), Query Frame = 1
Query: 232 MMNYNEFQRSSKGWRFSPKVLRWALYALAKMGSAGYNVIQDVLHL----------LAAAGTTRLGVQHHLVEAYGKMAAEDNLGRFDLCGILVWDLMHLNTNGFKVRPNGGGIQGLVDPDSILRHPLDGVKGVAENISLEEILETFVATQYPEVFWVSIGNPKYE 696
MMNYN+FQ SSKGWRFSPKVLRWALYALA MGSAGYNVIQDVLHL AAAGTT GVQHHLVEAYGKMAAEDNLGRFDLCGILVWDLMHLNTNGFKVRPNGGGIQGLVDPDSILRHPLDGVKGVA+NISLEE LETFVATQY EVFWVSIGN KY+
Sbjct: 1 MMNYNKFQGSSKGWRFSPKVLRWALYALANMGSAGYNVIQDVLHLPSIGHLRKVRRAAAGTTTWGVQHHLVEAYGKMAAEDNLGRFDLCGILVWDLMHLNTNGFKVRPNGGGIQGLVDPDSILRHPLDGVKGVADNISLEETLETFVATQYLEVFWVSIGNLKYK 165
BLAST of mRNA_P-littoralis_Contig656.12.1 vs. uniprot
Match: A0A6H5KFP1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KFP1_9PHAE) HSP 1 Score: 275 bits (704), Expect = 1.780e-83 Identity = 146/247 (59.11%), Postives = 180/247 (72.87%), Query Frame = 1
Query: 46 LRDKVKHLEEEVRRIRKEDIRIAADAEWDQGRRLHEALSGE-EPRKLFDKLPEGSLARAVVDEMMNYNEFQRSSKGWRFSPKVLRWALYALAKMGSAGYNVIQDVLHL---------LAAAGTTRLGVQHHLVEAYGKMAAEDNLGR--------------------FDLCGILVWDLMHLNTNGFKVRPNGGGIQGLVDPDSILRHPLDGVKGVAENISLEEILETFVATQYPEVFWVSIGNPKYE 696
LRD ++H+E ++RR R++D+ IAAD E QGRRLHE LSG + + +F +LPEGSLARAVV+EMM YN+ + S+KGWRF+ KVLRWA YALAKMG AGY V++DVLHL +AA+ +T++G Q+HL+EA+ KMA EDN FDL GILVWDLMHLN N F+V PNGGGI+GLVD DS RHPLD V+GV E+I+LE+ LETFVATQY EVFWVSIGNPKY+
Sbjct: 212 LRDHIRHMEVQLRRCREDDVVIAADNE--QGRRLHETLSGNPDVKDVFARLPEGSLARAVVEEMMRYNQHRGSAKGWRFNAKVLRWACYALAKMGGAGYQVLRDVLHLPHIKHVQKIVAASTSTKMGEQYHLIEAFAKMACEDNXSTSRYVELFWFYSLLWRPYGLVFDLLGILVWDLMHLNQNDFRVCPNGGGIEGLVDRDSFFRHPLDAVQGVDEHITLEKTLETFVATQYLEVFWVSIGNPKYK 456
BLAST of mRNA_P-littoralis_Contig656.12.1 vs. uniprot
Match: A0A6H5K7Z3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K7Z3_9PHAE) HSP 1 Score: 267 bits (682), Expect = 5.410e-82 Identity = 136/227 (59.91%), Postives = 165/227 (72.69%), Query Frame = 1
Query: 46 LRDKVKHLEEEVRRIRKEDIRIAADAEWDQGRRLHEALSGEEPRKLFDKLPEGSLARAVVDEMMNYNEFQRSSKGWRFSPKVLRWALYALAKMGSAGYNVIQDVLHL----------LAAAGTTRLGVQHHLVEAYGKMAAEDNLGRFDLCGILVWDLMHLNTNGFKVRPNGGGIQGLVDPDSILRHPLDGVKGVAENISLEEILETFVATQYPEVFWVSIGNPKYE 696
LRD+ ++ E+ V K+DI I + DQGRRLHEAL E+ +LF +PE S RA+VD MM+ NE + KGWR+SPKV+RW YALAKMG AGY +I+D+LHL A GT G+QH L+EA+GKMAAE+NLGRFDL GIL WD MHLNTNGF VRPNGGGI GLV DS+L HPL+ V+GV + ISLE+ LETF+ATQY EV+WVSIGNPKY+
Sbjct: 15 LRDRARYWEQRVEESAKDDIVIHPGEDDDQGRRLHEALKTEDVEELFADIPEDSYERALVDHMMDRNEREGPKKGWRYSPKVVRWYCYALAKMGKAGYALIRDILHLPSISTVNRARRAGRGTATWGLQHDLIEAHGKMAAEENLGRFDLAGILCWDCMHLNTNGFTVRPNGGGISGLVSGDSVLYHPLEAVQGVDKTISLEDTLETFMATQYLEVWWVSIGNPKYK 241
BLAST of mRNA_P-littoralis_Contig656.12.1 vs. uniprot
Match: D7FZI2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZI2_ECTSI) HSP 1 Score: 144 bits (364), Expect = 5.550e-36 Identity = 85/220 (38.64%), Postives = 122/220 (55.45%), Query Frame = 1
Query: 67 LEEEVRRIRKEDIRIAADAEWDQGRRLHEALSGEEPRKLF-DKLPEGSLARAVVDEMMNYNEFQRSSKGWRFSPKVLRWALYALAKMGSAGYNVIQDVLHLLAA---------AGTTRLGVQHHLVEAYGKMAAEDNLGRFDLCGILVWDLMHLNTNGFKVRPNGGGIQGLVDPDSILRHPLDGVKGVAENISLEEILETFVATQYPEVFWVSIGNPKYE 696
L E + +RKE +R+ + QG LH+ L E +++ +LP+GS R ++ + +N +KG+RF P +R A+Y G+A YN++++VLHL + A R GV + YGK+AA + + DL G+L WDLMHLN NGF PNGGG GLVD + GV + + E ILE VATQY E+F+VSIG P+Y+
Sbjct: 395 LRERIVSMRKECVRVPVE----QGEALHKFLVDAETKEVIHSRLPQGSDQRYFYEDQVKWNTSHGKAKGFRFHPATMRLAIYIQGIAGTAAYNMLRNVLHLPSPERIKQLRRNAAPPRTGVLTENILKYGKLAATQDADKVDLMGVLTWDLMHLNKNGFSFAPNGGGFTGLVDETTFFNPIYKHEGGVVKEV--EPILEKIVATQYVEMFFVSIGKPEYK 608
BLAST of mRNA_P-littoralis_Contig656.12.1 vs. uniprot
Match: A0A6H5KVF4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KVF4_9PHAE) HSP 1 Score: 139 bits (350), Expect = 4.080e-34 Identity = 83/220 (37.73%), Postives = 120/220 (54.55%), Query Frame = 1
Query: 67 LEEEVRRIRKEDIRIAADAEWDQGRRLHEALSGEEPRKLF-DKLPEGSLARAVVDEMMNYNEFQRSSKGWRFSPKVLRWALYALAKMGSAGYNVIQDVLHLLAA---------AGTTRLGVQHHLVEAYGKMAAEDNLGRFDLCGILVWDLMHLNTNGFKVRPNGGGIQGLVDPDSILRHPLDGVKGVAENISLEEILETFVATQYPEVFWVSIGNPKYE 696
L E + +RKE +R+ + QG LH+ L E +++ +LP+GS R ++ + +N +KG+RF P +R A+Y G+A YN++++VLHL + A R V + YGK+AA + + DL G+L WDLMHLN NGF PNGGG GLVD + GV + + E LE VATQY E+F+VSIG P+Y+
Sbjct: 486 LRERIVSMRKECVRVPVE----QGEALHKFLVDAETKEVIHSRLPQGSDQRYFYEDQVKWNTSHGKAKGFRFHPATMRLAIYIQGIAGTAAYNMLRNVLHLPSPERIKQLRRNAAPPRTCVLTENILKYGKLAATQDADKVDLMGVLTWDLMHLNKNGFSFAPNGGGFTGLVDETAFFNPIYKHEGGVVKEV--EPTLEKIVATQYVEMFFVSIGKPEYK 699
BLAST of mRNA_P-littoralis_Contig656.12.1 vs. uniprot
Match: A0A6H5L5M0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L5M0_9PHAE) HSP 1 Score: 120 bits (300), Expect = 1.810e-27 Identity = 65/173 (37.57%), Postives = 93/173 (53.76%), Query Frame = 1
Query: 205 SLARAVVDEMMNYNEFQRSSKGWRFSPKVLRWALYALAKMGSAGYNVIQDVLHLLAA---------AGTTRLGVQHHLVEAYGKMAAEDNLGRFDLCGILVWDLMHLNTNGFKVRPNGGGIQGLVDPDSILRHPLDGVKGVAENISLEEILETFVATQYPEVFWVSIGNPKYE 696
+L + + +N +KG+RF P +R A+Y G+A YN++ +VLHL + A R GV + GK+AA + + DL G+L WDLMHLN NGF PNGGG GLVD + G+ + + E ILE VATQY E+++VS+G P+Y+
Sbjct: 296 TLPLPCAQDQVKWNTSHGKAKGFRFHPATMRLAIYIQGIAGTAAYNMLTNVLHLPSPERIKQLRRNAAPPRTGVLTENILKNGKLAATQDTDKADLMGVLAWDLMHLNKNGFSFAPNGGGFTGLVDETTFFNPIYKHEGGIVKEV--EPILEKIVATQYVEMYFVSVGKPEYK 466
BLAST of mRNA_P-littoralis_Contig656.12.1 vs. uniprot
Match: A0A6H5K071_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K071_9PHAE) HSP 1 Score: 64.7 bits (156), Expect = 2.020e-8 Identity = 41/131 (31.30%), Postives = 69/131 (52.67%), Query Frame = 1
Query: 91 RKEDIRIAADAEWDQGRRLHEALSGEEPRKLFDKLPEGSLA-------------RAVVDEMMNYNEFQRSSKGWRFSPKVLRWALYALAKMGSAGYNVIQDVLHLLAAAGTTRLG---------VQHHLVE 417
R++DI I A E DQG++L + L ++ + ++L + A ++ + +N S KGWR++PKVLRWALYA+ + GS+ Y V+++VLHL ++G +QHH ++
Sbjct: 201 REDDIIIPA--EEDQGQQLFDLLQHDDIQNKGERLCNQNDAISASITTTCVRFGTSLSQDNYEWNRVNGSKKGWRYNPKVLRWALYAMHRCGSSAYEVLREVLHLPDPRHVRKIGMKTDPISAGIQHHNIK 329 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig656.12.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 7
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig656.12.1 >prot_P-littoralis_Contig656.12.1 ID=prot_P-littoralis_Contig656.12.1|Name=mRNA_P-littoralis_Contig656.12.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=232bp RLRSSRRRPRIIELYLRDKVKHLEEEVRRIRKEDIRIAADAEWDQGRRLHback to top mRNA from alignment at P-littoralis_Contig656:117483..119125+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig656.12.1 ID=mRNA_P-littoralis_Contig656.12.1|Name=mRNA_P-littoralis_Contig656.12.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=1643bp|location=Sequence derived from alignment at P-littoralis_Contig656:117483..119125+ (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig656:117483..119125+ >mRNA_P-littoralis_Contig656.12.1 ID=mRNA_P-littoralis_Contig656.12.1|Name=mRNA_P-littoralis_Contig656.12.1|organism=Pylaiella littoralis U1_48|type=CDS|length=696bp|location=Sequence derived from alignment at P-littoralis_Contig656:117483..119125+ (Pylaiella littoralis U1_48)back to top |