mRNA_P-littoralis_Contig656.11.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig656.11.1 vs. uniprot
Match: A0A6H5K3F2_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K3F2_9PHAE) HSP 1 Score: 249 bits (635), Expect = 8.100e-77 Identity = 120/203 (59.11%), Postives = 146/203 (71.92%), Query Frame = 1
Query: 1 ERRAWPLYIKPMLGDGTFKGRFRMHHIDFKILVDHLRPELERDTTMGALRNGAVPVEYQVGLTFRWLAGASMYEGMDGHVIARSTAYQTAFRVIKAINDCTELDCKWPATPEDVADKAAHFEKRCSVGVIRK*CVGAMDGLFVRTIRPTTRDTAEPNSYYRGHKKGFGMNFQGICDTEHRIIAWTMNSPGCQNDRTAFKFSGF 609
ERR+W Y KPM+ DGTF+ RFRM + +F +L D LRP+LER+ MGALRNG +PVE+Q+ + R+LAG S++E MDG+VIARSTAY RVI AIN ELDC WP ED D+ + +R + GVIR CVGAMDGLFVR +P+ R P S+Y GHKKGFGMNFQG+C+ + IIAWTMN PG NDRTAFK S F
Sbjct: 49 ERRSWYTYAKPMVQDGTFRLRFRMDYTEFALLADMLRPKLERNERMGALRNGVIPVEFQLAMALRFLAGGSVFEVMDGNVIARSTAYAIVHRVIDAINQTRELDCVWPEG-EDALDQCGMYRRRSTNGVIRM-CVGAMDGLFVRMTQPSLRRHVNPRSFYSGHKKGFGMNFQGVCNARYEIIAWTMNCPGSCNDRTAFKHSVF 249
BLAST of mRNA_P-littoralis_Contig656.11.1 vs. uniprot
Match: A0A6H5K6M2_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K6M2_9PHAE) HSP 1 Score: 248 bits (633), Expect = 1.960e-76 Identity = 121/212 (57.08%), Postives = 153/212 (72.17%), Query Frame = 1
Query: 1 ERRAWPLYIKPMLGDGTFKGRFRMHHIDFKILVDHLRPELERDTTMGALRNGAVPVEYQVGLTFRWLAGASMYEGMDGHVIARSTAYQTAFRVIKAINDCTELDCKWPATPEDVADKAAHFEKRCSVGVIRK*CVGAMDGLFVRTIRPTTRDTAEPNSYYRGHKKGFGMNFQGICDTEHRIIAWTMNSPGCQNDRTAFKFSGFEQLSSRTCP 636
ERR++ Y++PM+ D TF+ RFRM + DF L D LRP+L+RD MGALRNGA+PVE+Q+ +T R+LAG S++E MD +VIA+STAY RVI AIN +L+CKWP +D +A + +R + GVIR+ CVGAMDGLFVR I P + A P S+Y GHKK FGMNFQGIC+ + II WTMN PG QNDRTAFK SGF+ L S+ P
Sbjct: 53 ERRSFYTYVRPMVEDNTFRKRFRMDYTDFMTLADILRPKLQRDEKMGALRNGAIPVEFQLAMTLRFLAGGSVFEVMDSNVIAKSTAYAIVHRVIDAINQTRQLNCKWPYG-DDAEAQAELYRRRSTNGVIRR-CVGAMDGLFVRLIPPCLKRHAVPGSFYSGHKKAFGMNFQGICNASYEIITWTMNCPGSQNDRTAFKHSGFDALLSKMPP 262
BLAST of mRNA_P-littoralis_Contig656.11.1 vs. uniprot
Match: A0A6H5L6B6_9PHAE (DDE Tnp4 domain-containing protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L6B6_9PHAE) HSP 1 Score: 241 bits (615), Expect = 7.860e-74 Identity = 113/176 (64.20%), Postives = 134/176 (76.14%), Query Frame = 1
Query: 91 ILVDHLRPELERDTTMGALRNGAVPVEYQVGLTFRWLAGASMYEGMDGHVIARSTAYQTAFRVIKAINDCTELDCKWPATPEDVADKAAHFEKRCSVGVIRK*CVGAMDGLFVRTIRPTTRDTAEPNSYYRGHKKGFGMNFQGICDTEHRIIAWTMNSPGCQNDRTAFKFSGFEQL 618
+LVDHLRP L+++ MG LRNGA+PVE QV +T RWLAG S+YE MDGHVIARSTAY VI A+N C EL+CKWP ED A A F R S+ V+RK CVGA DGLFVR I+P+ ++ AEPN YY GHKKGFGMNFQ +CD ++RI+AW MN PG QNDRTAF FSGF++L
Sbjct: 72 VLVDHLRPALQKNQQMGLLRNGAIPVEDQVAMTLRWLAGGSIYECMDGHVIARSTAYHVTSTVINALNACPELNCKWPEG-EDAARAAELFRNRSSMDVVRK-CVGATDGLFVRMIKPSAKEVAEPNLYYNGHKKGFGMNFQAVCDAQYRIMAWMMNCPGSQNDRTAFNFSGFDKL 245
BLAST of mRNA_P-littoralis_Contig656.11.1 vs. uniprot
Match: A0A6H5JJA1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJA1_9PHAE) HSP 1 Score: 235 bits (599), Expect = 1.100e-71 Identity = 118/206 (57.28%), Postives = 142/206 (68.93%), Query Frame = 1
Query: 1 ERRAWPLYIKPMLGDGTFKGRFRMHHIDFKILVDHLRPELERDTTMGALRNGAVPVEYQVGLTFRWLAGASMYEGMDGHVIARSTAYQTAFRVIKAINDCTELDCKWPATPEDVADKAAHFEKRCSVGVIRK*CVGAMDGLFVRTIRPTTRDTAEPNSYYRGHKKGFGMNFQGICDTEHRIIAWTMNSPGCQNDRTAFKFSGFEQL 618
ERR + YIKPML D TF RFRM + DF++LVDHLRP L+++ G LRNGA+PVEYQV +T RWLAG S+YE MDGHVIARSTAY VI A+N C EL+CKWP ED+ + + + V+RK CVGAMDGLFVR I+P+ ++ AEPN YY GHKKGFGMNFQ +C QNDRTAF FSGF++L
Sbjct: 53 ERRPFETYIKPMLQDHTFSMRFRMEYDDFRVLVDHLRPALQQNEKTGLLRNGAIPVEYQVAMTLRWLAGGSIYEYMDGHVIARSTAYHVTSTVINALNACPELNCKWPEG-EDLPEPPSFSATAALMDVVRK-CVGAMDGLFVRMIKPSAKEVAEPNLYYNGHKKGFGMNFQ-VCS---------------QNDRTAFNFSGFDKL 240
BLAST of mRNA_P-littoralis_Contig656.11.1 vs. uniprot
Match: A0A6H5JVS8_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JVS8_9PHAE) HSP 1 Score: 194 bits (494), Expect = 1.070e-56 Identity = 95/194 (48.97%), Postives = 120/194 (61.86%), Query Frame = 1
Query: 1 ERRAWPLYIKPMLGDGTFKGRFRMHHIDFKILVDHLRPELERDTTMGALRNGAVPVEYQVGLTFRWLAGASMYEGMDGHVIARSTAYQTAFRVIKAINDCTELDCKWPATPEDVADKAAHFEKRCSVGVIRK*CVGAMDGLFVRTIRPTTRDTAEPNSYYRGHKKGFGMNFQGICDTEHRIIAWTMNSPGCQND 582
ERR + +IKP+L D TF RFRM + DF++L+DHLRP L ++ MG LR GA+PVEYQ+ +T RWLAG S+YE MDGHVIARSTAY VI A+N C EL+CKWP DV K CVGAMDGLFVR I+P+ ++ AEPN YY GH+KG + +E ++ + S D
Sbjct: 53 ERRPFETHIKPLLQDHTFSVRFRMEYDDFRVLIDHLRPALHKNEKMGLLRIGAIPVEYQIAMTLRWLAGGSIYECMDGHVIARSTAYHVTSTVINALNACPELNCKWPEARMDVVRK----------------CVGAMDGLFVRMIKPSAKEVAEPNLYYNGHRKGVVVGDAAYGASERVVVPFPGTSLSASQD 230
BLAST of mRNA_P-littoralis_Contig656.11.1 vs. uniprot
Match: A0A6H5KD49_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KD49_9PHAE) HSP 1 Score: 169 bits (429), Expect = 1.480e-49 Identity = 85/134 (63.43%), Postives = 97/134 (72.39%), Query Frame = 1
Query: 136 MGALRNGAVPVEYQVGLTFRWLAGASMYEGMDGHVIARSTAYQTAFRVIKAINDCTELDCKWPATPEDVADKAAHFEKRCSVGVIRK*CVGAMDGLFVRTIRPTTRDTAEPNSYYRGHKKGFGMNFQGICDTEH 537
MG LRNGA+PVE QV +T RWLAG S+YE MDGHVIARSTAY VI A+N C EL+CKWP ED A A F R S+ V+RK CVGAMD LFVR I+P+ ++ AEPN YY GHKKGFGMNFQ +C H
Sbjct: 1 MGLLRNGAIPVEDQVAMTLRWLAGGSIYECMDGHVIARSTAYHVTSTVINALNACPELNCKWPEG-EDAARAAELFRNRSSMDVVRK-CVGAMDVLFVRMIKPSAKEVAEPNLYYNGHKKGFGMNFQ-VCMCIH 131
BLAST of mRNA_P-littoralis_Contig656.11.1 vs. uniprot
Match: A0A6H5KCG0_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KCG0_9PHAE) HSP 1 Score: 153 bits (386), Expect = 1.750e-40 Identity = 73/138 (52.90%), Postives = 90/138 (65.22%), Query Frame = 1
Query: 205 GASMYEGMDGHVIARSTAYQTAFRVIKAINDCTELDCKWPATPEDVADKAAHFEKRCSVGVIRK*CVGAMDGLFVRTIRPTTRDTAEPNSYYRGHKKGFGMNFQGICDTEHRIIAWTMNSPGCQNDRTAFKFSGFEQL 618
G S++E MDG V A+STAY +RVI AIN E DC WP +D D+ + +R + VI CVGAMDGLFV P+ R P +Y GHKKGFGMNFQ +C+ ++I AWTMN PG NDRTAFK SGFE++
Sbjct: 51 GGSIFEVMDGCVFAKSTAYAIVYRVIDAINQTREFDCVWPEG-DDALDQCGVYRQRSTNNVIHM-CVGAMDGLFVLIFEPSLRRHVNPRGFYSGHKKGFGMNFQAVCNARYKITAWTMNCPGSCNDRTAFKHSGFERV 186
BLAST of mRNA_P-littoralis_Contig656.11.1 vs. uniprot
Match: A0A6H5K540_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K540_9PHAE) HSP 1 Score: 143 bits (360), Expect = 8.590e-37 Identity = 81/205 (39.51%), Postives = 96/205 (46.83%), Query Frame = 1
Query: 4 RRAWPLYIKPMLGDGTFKGRFRMHHIDFKILVDHLRPELERDTTMGALRNGAVPVEYQVGLTFRWLAGASMYEGMDGHVIARSTAYQTAFRVIKAINDCTELDCKWPATPEDVADKAAHFEKRCSVGVIRK*CVGAMDGLFVRTIRPTTRDTAEPNSYYRGHKKGFGMNFQGICDTEHRIIAWTMNSPGCQNDRTAFKFSGFEQL 618
RR + YIKPML D TF RFRM + DF++LVDHLRP L+++ MG LRNGA+PVEYQV +T RWLAG S YE MDGHVIARSTAY +CD ++RI+AW MN PG QNDRTAF FSGF++L
Sbjct: 54 RRPFETYIKPMLQDHTFSMRFRMEYDDFRVLVDHLRPALQKNEKMGLLRNGAIPVEYQVAMTLRWLAGGSTYECMDGHVIARSTAYHA------------------------------------------------------------------------------------VCDAQYRIMAWMMNCPGSQNDRTAFNFSGFDKL 174
BLAST of mRNA_P-littoralis_Contig656.11.1 vs. uniprot
Match: A0A6H5KNF2_9PHAE (DDE Tnp4 domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNF2_9PHAE) HSP 1 Score: 124 bits (310), Expect = 3.380e-30 Identity = 53/80 (66.25%), Postives = 66/80 (82.50%), Query Frame = 1
Query: 379 VGVIRK*CVGAMDGLFVRTIRPTTRDTAEPNSYYRGHKKGFGMNFQGICDTEHRIIAWTMNSPGCQNDRTAFKFSGFEQL 618
V V+RK CVGAMDGLFVR I+P+ ++ AEPN YY GHK GFGMNFQ +CD ++RI+AWTM+ PG QNDRTAF F+ F++L
Sbjct: 15 VDVVRK-CVGAMDGLFVRMIKPSAKEVAEPNLYYNGHKNGFGMNFQAVCDAQYRIVAWTMSCPGSQNDRTAFNFAWFDKL 93
BLAST of mRNA_P-littoralis_Contig656.11.1 vs. uniprot
Match: A0A6H5J9B3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J9B3_9PHAE) HSP 1 Score: 108 bits (269), Expect = 1.200e-25 Identity = 53/83 (63.86%), Postives = 58/83 (69.88%), Query Frame = 1
Query: 136 MGALRNGAVPVEYQVGLTFRWLAGASMYEGMDGHVIARSTAYQTAFRVIKAINDCTELDCKWPATPEDVADKAAHFEKRCSVG 384
MG LRNGA+PVEYQV +T RWLAG S+YE MDGHVIARSTAY VI A+N C EL+CKWP ED A A F R S G
Sbjct: 1 MGLLRNGAIPVEYQVAMTLRWLAGGSIYECMDGHVIARSTAYHVTSTVINALNACPELNCKWPEG-EDAAGAAELFRNRSSYG 82 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig656.11.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig656.11.1 >prot_P-littoralis_Contig656.11.1 ID=prot_P-littoralis_Contig656.11.1|Name=mRNA_P-littoralis_Contig656.11.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=122bp MLGDGTFKGRFRMHHIDFKILVDHLRPELERDTTMGALRNGAVPVEYQVGback to top mRNA from alignment at P-littoralis_Contig656:102622..104444- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig656.11.1 ID=mRNA_P-littoralis_Contig656.11.1|Name=mRNA_P-littoralis_Contig656.11.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=1823bp|location=Sequence derived from alignment at P-littoralis_Contig656:102622..104444- (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig656:102622..104444- >mRNA_P-littoralis_Contig656.11.1 ID=mRNA_P-littoralis_Contig656.11.1|Name=mRNA_P-littoralis_Contig656.11.1|organism=Pylaiella littoralis U1_48|type=CDS|length=366bp|location=Sequence derived from alignment at P-littoralis_Contig656:102622..104444- (Pylaiella littoralis U1_48)back to top |