mRNA_P-littoralis_Contig654.6.5 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig654.6.5
Unique NamemRNA_P-littoralis_Contig654.6.5
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
BLAST of mRNA_P-littoralis_Contig654.6.5 vs. uniprot
Match: D7G7L2_ECTSI (G-patch_2 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G7L2_ECTSI)

HSP 1 Score: 577 bits (1486), Expect = 1.230e-190
Identity = 477/729 (65.43%), Postives = 515/729 (70.64%), Query Frame = 3
Query:  522 GKRDFVTGIGGGKVVTKEVVVERGPRVIALASNPWANGSSXXXXXXXXXXXXXXXXXXXXXXANDAPAPEKSLDQLAAEAIARESRRGDGDGAATDGYGLGLDSDRVIGMVGKT-----GDNSSEATXXXXXXXXXXXSGGNKKRTGILEQNMIPGLMDVDGEDAKFKHDLGHRAEDLTARSKAYVDVPVAEFGAALLRGMGWQGPEGDXXXXXXXXXX-GLSNEIEPRHHRLGLGAQPKPPEEMKKPRKRKPGEKARSSDAERLKIWEQKLQEERSRASQQSGNSKQLSVMDVVELSEEGGNDGKRGNGGQRPRAMVLKTQGVPGLNKISVRMEDTGEKVLVDKSSATRVSEDDLARRPFSENKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFDRGVSEERSDAEERGRRDGGKKSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGPSVDGRWGSPTPRPSYDXXXXXXXXXXXXXXXXXXXXXXXXXXDRDHRSSGRPRGDDSRGREDDVPADRKRNRRDADGRNGYSSGSANGHARKGSSGSXXXXXNGDGGRKYSQQEASELKASWLRANIRVRVVHKSYAGGRAYLGKGRVVDVPRVGQATVRMDVGDLVLEDAKERHLETVLPARGGKVIVVRGTEKGATGKLLARNKEKETAMVQVYEDLRVVTLSLDDVAEFTGMLDEDMDDVGY 2690
            GKRD+VTGIGGGKVVTKEVVV+RGPRVIALASNPWANGS+     XXXXXXXXXXXXX    A + PA EKSLDQLAAEAIA+ES RGDG  A  D +GLGLDSDRVIGM+GK      GD+S+ A            + G+K+ TG+LEQNMIPGLM+VDGEDAKF+HDLGHRAED +ARSKAYVDVPVAEFGAALLRGMGW+GPEGD XXXXXXXX   LS +IEPRHHRLGLGAQPKPPEEMK+PR +KPGEK RSSDAERLKIWE+K+QEER RAS+ S  + QL+VMDVVELSE GG  G+R     RPRAMVLKTQGVPGLNKISVRMEDTGEKVLVDKS+ATRVSED+LARRPFSENK       XXXXXXXXXXXXXXXXX                                 S ER D         G++   XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX                     XXXXXXXXXXXXXXXXXXXXXXX     + G+  G          PA                                                       WLRANIRVRV+HKSY GGRAYLGKGRVVDVPR GQATVRMD+G+LVLE  KERHLETVLPARGGKVIVVRG EKGATGKLLA+NKEKETA+VQVYEDLR VTLSLDDVAEFTGMLDEDM+DVGY
Sbjct:   59 GKRDYVTGIGGGKVVTKEVVVDRGPRVIALASNPWANGSNAAAAAXXXXXXXXXXXXXRPPTAEE-PAGEKSLDQLAAEAIAKESVRGDGSSA--DAFGLGLDSDRVIGMIGKNPAAGEGDSSNGAATAKTTPD----AAGSKRNTGLLEQNMIPGLMEVDGEDAKFRHDLGHRAEDFSARSKAYVDVPVAEFGAALLRGMGWKGPEGDGXXXXXXXXGPDLSKDIEPRHHRLGLGAQPKPPEEMKRPRTKKPGEKPRSSDAERLKIWEKKVQEERLRASRPSAAA-QLAVMDVVELSEGGGERGRR-----RPRAMVLKTQGVPGLNKISVRMEDTGEKVLVDKSTATRVSEDELARRPFSENKDRSSRSSXXXXXXXXXXXXXXXXXSG-------------------------------SVERED---------GRRERRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGRGXXXXXXXXXXXXXXXXXXXXXXXXXXXXNGGQQSG---------PPA-------------------------------------------------------WLRANIRVRVIHKSYGGGRAYLGKGRVVDVPRAGQATVRMDLGELVLEGVKERHLETVLPARGGKVIVVRGAEKGATGKLLAKNKEKETALVQVYEDLRAVTLSLDDVAEFTGMLDEDMEDVGY 670          
BLAST of mRNA_P-littoralis_Contig654.6.5 vs. uniprot
Match: A0A835ZCA3_9STRA (DExH-box splicing factor binding site-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZCA3_9STRA)

HSP 1 Score: 184 bits (467), Expect = 1.060e-46
Identity = 140/301 (46.51%), Postives = 167/301 (55.48%), Query Frame = 3
Query:  717 APAPEKSLDQLAAEAIARES----RRGDGDGAATDGYGLGLDSDRVIGMVGKTGDNSSEATXXXXXXXXXXXSGGNKKRTGILEQNMIPGLMDVDGED-AKFKHDLGHRAEDLTARSKAYVDVPVAEFGAALLRGMGWQGPEGDXXXXXXXXXXGLSNEI---EPRHHRLGLGAQPKPPEEMK--KPRKRKPGEKARSSDAERLKIWEQKLQEERSRASQQSGNSKQLSVMDVVELSEEGGNDGKRGNGGQRPRAMVLKTQGVPGLNKISVRMEDTGEKVLVDKSSATRVSEDDLARRPFS 1589
            A A EKSLD+LAAE + RE+    R+   +   TD  GLGLDSDRVI M                       + G +KR GILE  MIPGL +V G D AK KHDL  RA D+ A+S  Y  VPV EFGAALLRGMGW GP  +          G +N +   EPRHHRLGLGA PKPPEE    +PRKRKPGEKA + D E    W  K       A+  S  + +L+V  VVEL+              R RAMVLKTQGVPGL KI VR+E  G +  V ++    V ED+LA +PF+
Sbjct:    6 AGAKEKSLDELAAEELVREADEERRQLQRNSRGTDA-GLGLDSDRVIAMK-----------------VAAEQAAGARKR-GILEAAMIPGLNEVAGGDGAKLKHDLAIRAADIDAKSDVYRHVPVEEFGAALLRGMGWAGPAPEDKE-------GNANPLGTAEPRHHRLGLGAAPKPPEEKHGDRPRKRKPGEKANARDEELRAAWAAK-------AAAASAAAARLTVGQVVELTA------------TRRRAMVLKTQGVPGLGKIMVRLEQGGAEEAVSRTDMQLVPEDELALKPFT 261          
BLAST of mRNA_P-littoralis_Contig654.6.5 vs. uniprot
Match: A0A7S1TSS7_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TSS7_9STRA)

HSP 1 Score: 129 bits (325), Expect = 2.490e-28
Identity = 89/217 (41.01%), Postives = 118/217 (54.38%), Query Frame = 3
Query:  948 ILEQNMIPGLMDVDGEDAKFKHDLGHRAEDLTARSKAYVDVPVAEFGAALLRGMGWQGPEGDXXXXXXXXXXGLSNEIEPRHHRLGLGAQPKPPEEMKKPRKRKPGEKARSSDAERLKIWEQKLQEERSRASQQSGNSKQLSVMDVVELSEEGGNDGKRGNGGQRPRAMVLKTQGVPGLNKISVRMEDTGEKVLVDKSSATRVSEDDLARRPFSENK 1598
            +L Q M+PGL +++ EDAKFKHDL +RAEDL A+ +AY  + + +FGAA+LRGMGW GP  +                  RHHRLGLGA P    E K       G  AR    E  K WE K Q ER R  + S   K+L + DVV + + G + G RG         V  T GVPGL++I VR+E+TG    + +  A RV  ++L  RPF + +
Sbjct:   50 LLLQGMVPGLNEIESEDAKFKHDLRYRAEDLGAKDEAYQRIKIDDFGAAMLRGMGWTGPTKEEEELHKKQHGA-------RHHRLGLGAAPAAILEPKGK-----GRAARKRADEANKEWEAKAQAERERLKEAS---KRLKIGDVVWIRK-GDHVGVRGR--------VELTVGVPGLDRIRVRLEETGAAADIPRQDAARVGHEELDERPFVDGE 242          
BLAST of mRNA_P-littoralis_Contig654.6.5 vs. uniprot
Match: A0A1E7FVK9_9STRA (KN17_SH3 domain-containing protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FVK9_9STRA)

HSP 1 Score: 109 bits (273), Expect = 1.650e-24
Identity = 58/121 (47.93%), Postives = 82/121 (67.77%), Query Frame = 3
Query: 2316 SWLRANIRVRVVHKSYAGGRAYLGKGRVVDVPRVGQATVRMDVGDLVLEDAKERHLETVLPARGGKVIVVRGTEKGATGKLLARNKEKETAMVQVYEDLRVVTLSLDDVAEFTGMLDEDMD 2678
            SWL  NIRVRV+   Y GG  Y  KG VVDV R G AT++M  G ++  +  ERHLET LP  GG  I++ G ++ + G+LL R+ +K   +VQV+ED+ V+T SLD++AE+ G LD+D++
Sbjct:    3 SWLIPNIRVRVISSKY-GGSVYKEKGVVVDVTRRGVATLKMGNGQVI--NVAERHLETALPKAGGNSIILSGDQRHSKGRLLERDSKKNRGVVQVFEDMSVITTSLDEMAEWCGPLDDDLE 120          
BLAST of mRNA_P-littoralis_Contig654.6.5 vs. uniprot
Match: A0A7S3GQG0_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3GQG0_9STRA)

HSP 1 Score: 113 bits (283), Expect = 2.450e-22
Identity = 93/300 (31.00%), Postives = 142/300 (47.33%), Query Frame = 3
Query:  720 PAPEKSLDQLAAEAIARESRRGDGDGAATDGYGLGLDSDRVIGMVGKTGDNSSEATXXXXXXXXXXXSGGNKKRTGILEQNMIPGLMDVDGEDAKFKHDLGHRAEDLTARSKAYVDVPVAEFGAALLRGMGWQGPEGDXXXXXXXXXXGLSNEIEPRHHRLGLGAQPKPPEEMKKPRKR----KPGEKARSSDAERLK-----IWEQKLQEERSRASQQSGNSKQLSVMDVVELSEEGGNDGKRGNGGQRPRAMVLKTQGVPGLNKISVRMEDTGEKVLVDKSSATRVSEDDLARRPFSE 1592
            PA  K+LDQ+AA  +  + ++G  +           D D    +V K    ++EA                KK+  +L  N+ P L+ +  +  +FK+D+  RAEDL  RS+ Y  +PV++FGAALLRGMGW GP+ D              ++  R  RLGLGAQ +PPE  K         K G      + E+ K      WEQK +        Q  +S++L   DVV L       G+R        A+V+  +GVPGL+++ +++E +G  + V +     + +D+LA  PF E
Sbjct:   89 PAAAKTLDQIAAAELLADLQKGSTE-----------DEDEANLLVIKQTPTAAEAAANQTDNNSQV-----KKKAPLLMLNVAPELLSITNDADRFKYDVSSRAEDLNVRSEIYDAIPVSQFGAALLRGMGWAGPDKDEEKKK-------DEKLVAREQRLGLGAQARPPERAKSNNSNNILGKTGTSTARDEEEKRKESXXXXWEQKAE--------QRLHSQRLQDEDVVWLRGPAELSGRR--------AVVVTAKGVPGLDRVRIQLEHSGRILEVGRKECVLLPDDELATTPFVE 349          
BLAST of mRNA_P-littoralis_Contig654.6.5 vs. uniprot
Match: A0A7S4ELZ5_9STRA (Hypothetical protein n=1 Tax=Pseudo-nitzschia australis TaxID=44445 RepID=A0A7S4ELZ5_9STRA)

HSP 1 Score: 110 bits (276), Expect = 1.870e-21
Identity = 60/122 (49.18%), Postives = 82/122 (67.21%), Query Frame = 3
Query: 2313 ASWLRANIRVRVVHKSYAGGRAYLGKGRVVDVPRVGQATVRMDVGDLVLEDAKERHLETVLPARGGKVIVVRGTEKGATGKLLARNKEKETAMVQVYEDLRVVTLSLDDVAEFTGMLDEDMD 2678
            ASWL  NIRVRVV   Y G   Y  KG V+DV R G AT++M  G ++   A ERHLET LP  GG  I++ G ++ + G+LL R+ +K   +VQV+ED+ +VT SLDD+AE+ G LD+D++
Sbjct:  435 ASWLIPNIRVRVVSSKY-GRSVYKEKGVVIDVTRKGVATLKMGSGQVI--SAPERHLETALPKAGGNAIILSGDQRFSKGQLLERDGKKNRGVVQVFEDMSIVTTSLDDMAEWCGPLDDDLE 553          
BLAST of mRNA_P-littoralis_Contig654.6.5 vs. uniprot
Match: A0A7S3XXF9_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XXF9_HETAK)

HSP 1 Score: 103 bits (257), Expect = 2.000e-21
Identity = 59/112 (52.68%), Postives = 77/112 (68.75%), Query Frame = 3
Query: 2319 WLRANIRVRVVHKSYAGGRAYLGKGRVVDVPRVGQATVRMDVGDLVLEDAKERHLETVLP-ARGGKVIVVRGTEKGATGKLLARNKEKETAMVQVYEDLRVVTLSLDDVAEF 2651
            WL  +IRVRVV +  AGGR +  KG V++VP  G+A +RMD G   LE+ +ERHLET LP A GG+V+V+RG  +   G LLAR+   E A VQ+ +D+ VV L LDD+AEF
Sbjct:   81 WLAEHIRVRVVSEDLAGGRFFRQKGVVLEVPAQGRADLRMDSGAR-LENVRERHLETALPKAAGGRVLVLRGARRFERGALLARDLGAEVASVQLEDDMDVVQLPLDDIAEF 191          
BLAST of mRNA_P-littoralis_Contig654.6.5 vs. uniprot
Match: A0A7S3VCG7_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3VCG7_9STRA)

HSP 1 Score: 111 bits (277), Expect = 2.250e-21
Identity = 66/133 (49.62%), Postives = 90/133 (67.67%), Query Frame = 3
Query: 2286 SQQEASELKASWLRANIRVRVVHKSYAGGRAYLGKGRVVDVPRVG-QATVRMDVGDLVLEDAKERHLETVLPARGGKVIVVRGTEKGATGKLLARNKEKETAMVQVYEDLRVVTLSLDDVAEFTGMLDEDMDD 2681
            S++E +E    WL +NIR+RVV K  A GR +  KG VVDV R G +AT++M  G+ +LE   ER+LET LP  GG VI++ G+ K   GKLL R+ EK   +VQ++ED+ V TLSLDD+AE+ G LD+ + D
Sbjct:  510 SRREKAEQH--WLVSNIRIRVVTKKIAKGRQFKQKGIVVDVLRKGSEATLQMSNGE-ILERIPERYLETALPKVGGNVIILTGSNKFEKGKLLERDSEKGRGVVQLFEDMHVKTLSLDDIAEYCGPLDDALAD 639          
BLAST of mRNA_P-littoralis_Contig654.6.5 vs. uniprot
Match: A0A7S1D9L4_CYCTE (Hypothetical protein n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1D9L4_CYCTE)

HSP 1 Score: 101 bits (252), Expect = 4.550e-21
Identity = 58/129 (44.96%), Postives = 83/129 (64.34%), Query Frame = 3
Query: 2289 QQEASELKASWLRANIRVRVVHKSYAGGRAYLGKGRVVDVPRVGQATVRMDVGDLVLEDAKERHLETVLPARGGKVIVVRGTEKGATGKLLARNKEKETAMVQVYEDLRVVTLSLDDVAEFTGMLDEDM 2675
            +++ SE   SWL  NIRVRVV K   G + +  KG VVDV R   AT+++  G L L+   E +LET LP  GG  +++ G  K A GKLL RN +    ++Q++ED+ V++LSLDD+AE+ G LD+D+
Sbjct:   42 ERQQSEDIRSWLIPNIRVRVVTKKL-GSKYFKEKGVVVDVTRGPCATLQLSSGQL-LDRVPESYLETALPKVGGNAVILAGKSKLAKGKLLERNSDSGEGIIQIFEDMSVLSLSLDDLAEWVGPLDDDL 168          
BLAST of mRNA_P-littoralis_Contig654.6.5 vs. uniprot
Match: A0A7S4D8J8_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4D8J8_HETAK)

HSP 1 Score: 103 bits (257), Expect = 2.170e-20
Identity = 59/112 (52.68%), Postives = 77/112 (68.75%), Query Frame = 3
Query: 2319 WLRANIRVRVVHKSYAGGRAYLGKGRVVDVPRVGQATVRMDVGDLVLEDAKERHLETVLP-ARGGKVIVVRGTEKGATGKLLARNKEKETAMVQVYEDLRVVTLSLDDVAEF 2651
            WL  +IRVRVV +  AGGR +  KG V++VP  G+A +RMD G   LE+ +ERHLET LP A GG+V+V+RG  +   G LLAR+   E A VQ+ +D+ VV L LDD+AEF
Sbjct:  186 WLAEHIRVRVVSEDLAGGRFFRQKGVVLEVPAQGRADLRMDSGAR-LENVRERHLETALPKAAGGRVLVLRGARRFERGALLARDLGAEVASVQLEDDMDVVQLPLDDIAEF 296          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig654.6.5 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G7L2_ECTSI1.230e-19065.43G-patch_2 domain-containing protein n=2 Tax=Ectoca... [more]
A0A835ZCA3_9STRA1.060e-4646.51DExH-box splicing factor binding site-domain-conta... [more]
A0A7S1TSS7_9STRA2.490e-2841.01Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]
A0A1E7FVK9_9STRA1.650e-2447.93KN17_SH3 domain-containing protein n=1 Tax=Fragila... [more]
A0A7S3GQG0_9STRA2.450e-2231.00Hypothetical protein n=1 Tax=Spumella elongata Tax... [more]
A0A7S4ELZ5_9STRA1.870e-2149.18Hypothetical protein n=1 Tax=Pseudo-nitzschia aust... [more]
A0A7S3XXF9_HETAK2.000e-2152.68Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A7S3VCG7_9STRA2.250e-2149.62Hypothetical protein n=1 Tax=Chaetoceros debilis T... [more]
A0A7S1D9L4_CYCTE4.550e-2144.96Hypothetical protein n=1 Tax=Cyclophora tenuis Tax... [more]
A0A7S4D8J8_HETAK2.170e-2052.68Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig654contigP-littoralis_Contig654:9749..20362 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D7G7L2
Preferred nameGPKOW
PFAMsG-patch_2,KOW
Model size3163
Max annot lvl2759|Eukaryota
KEGG rclassRC00010
KEGG koko:K10798,ko:K13101,ko:K13566
KEGG ReactionR00269,R00348
KEGG Pathwayko00250,ko03410,ko04210,ko04212,ko04214,ko04217,map00250,map03410,map04210,map04212,map04214,map04217
KEGG ModuleM00296
Hectar predicted targeting categoryother localisation
GOsGO:0000375,GO:0000377,GO:0000398,GO:0002218,GO:0002253,GO:0002376,GO:0002682,GO:0002684,GO:0003674,GO:0003676,GO:0003723,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005681,GO:0006139,GO:0006396,GO:0006397,GO:0006725,GO:0006807,GO:0006950,GO:0006952,GO:0007154,GO:0007165,GO:0008150,GO:0008152,GO:0008380,GO:0009605,GO:0009607,GO:0009617,GO:0009870,GO:0009987,GO:0010467,GO:0016070,GO:0016071,GO:0023052,GO:0031347,GO:0031349,GO:0031974,GO:0031981,GO:0032991,GO:0034641,GO:0042742,GO:0043170,GO:0043207,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0044237,GO:0044238,GO:0044422,GO:0044424,GO:0044428,GO:0044446,GO:0044464,GO:0045088,GO:0045089,GO:0046483,GO:0048518,GO:0048583,GO:0048584,GO:0050776,GO:0050778,GO:0050789,GO:0050794,GO:0050896,GO:0051704,GO:0051707,GO:0051716,GO:0065007,GO:0070013,GO:0071704,GO:0080134,GO:0090304,GO:0097159,GO:0098542,GO:1901360,GO:1901363,GO:1990904
Exons7
Evalue9.01e-195
EggNOG OGsKOG4315@1|root,KOG4315@2759|Eukaryota
Ec32 ortholog descriptionHomologue of Arabidopsis MOS2 (MODIFIER OF SNC1, 2)
Ec32 orthologEc-22_001960.1
EC2.4.2.30,3.5.1.3
Descriptiondefense response signaling pathway, resistance gene-dependent
Cds size2400
COG categoryS
BRITEko00000,ko00001,ko00002,ko01000,ko03032,ko03036,ko03041,ko03400
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig654.6.5prot_P-littoralis_Contig654.6.5Pylaiella littoralis U1_48polypeptideP-littoralis_Contig654 10042..19892 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791366.3923476-UTR-P-littoralis_Contig654:9748..100411680791366.3923476-UTR-P-littoralis_Contig654:9748..10041Pylaiella littoralis U1_48UTRP-littoralis_Contig654 9749..10041 +
1680791366.4888926-UTR-P-littoralis_Contig654:19892..203621680791366.4888926-UTR-P-littoralis_Contig654:19892..20362Pylaiella littoralis U1_48UTRP-littoralis_Contig654 19893..20362 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791366.4062529-CDS-P-littoralis_Contig654:10041..109831680791366.4062529-CDS-P-littoralis_Contig654:10041..10983Pylaiella littoralis U1_48CDSP-littoralis_Contig654 10042..10983 +
1680791366.4163575-CDS-P-littoralis_Contig654:12296..123621680791366.4163575-CDS-P-littoralis_Contig654:12296..12362Pylaiella littoralis U1_48CDSP-littoralis_Contig654 12297..12362 +
1680791366.4300828-CDS-P-littoralis_Contig654:13021..132211680791366.4300828-CDS-P-littoralis_Contig654:13021..13221Pylaiella littoralis U1_48CDSP-littoralis_Contig654 13022..13221 +
1680791366.4403472-CDS-P-littoralis_Contig654:14167..144461680791366.4403472-CDS-P-littoralis_Contig654:14167..14446Pylaiella littoralis U1_48CDSP-littoralis_Contig654 14168..14446 +
1680791366.449688-CDS-P-littoralis_Contig654:15384..160671680791366.449688-CDS-P-littoralis_Contig654:15384..16067Pylaiella littoralis U1_48CDSP-littoralis_Contig654 15385..16067 +
1680791366.4633224-CDS-P-littoralis_Contig654:16570..167041680791366.4633224-CDS-P-littoralis_Contig654:16570..16704Pylaiella littoralis U1_48CDSP-littoralis_Contig654 16571..16704 +
1680791366.47929-CDS-P-littoralis_Contig654:19796..198921680791366.47929-CDS-P-littoralis_Contig654:19796..19892Pylaiella littoralis U1_48CDSP-littoralis_Contig654 19797..19892 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig654.6.5

>prot_P-littoralis_Contig654.6.5 ID=prot_P-littoralis_Contig654.6.5|Name=mRNA_P-littoralis_Contig654.6.5|organism=Pylaiella littoralis U1_48|type=polypeptide|length=800bp
MVSSKPKPKGFSMSLNKSKSAAAAAASSSSSAAAATAKGGGRGVGTGSSA
KPSSAIGVAHDDDDDNIHGEGGRGGGGKRDFVTGIGGGKVVTKEVVVERG
PRVIALASNPWANGSSSSSNTAAAAVSPPATAAAAAAAANDAPAPEKSLD
QLAAEAIARESRRGDGDGAATDGYGLGLDSDRVIGMVGKTGDNSSEATAA
GAGAGASASSGGNKKRTGILEQNMIPGLMDVDGEDAKFKHDLGHRAEDLT
ARSKAYVDVPVAEFGAALLRGMGWQGPEGDGGGGAGGAGAGLSNEIEPRH
HRLGLGAQPKPPEEMKKPRKRKPGEKARSSDAERLKIWEQKLQEERSRAS
QQSGNSKQLSVMDVVELSEEGGNDGKRGNGGQRPRAMVLKTQGVPGLNKI
SVRMEDTGEKVLVDKSSATRVSEDDLARRPFSENKNKSKSSRSSEKNLNA
SPSDDRNSRRERDDDEGGGGAGSRAENGSAKRSRSRSFDRGVSEERSDAE
ERGRRDGGKKSKSSKKDKKKHKKSSSNSGSSSSGSGTGTSFSKRQRERER
ERGPSVDGRWGSPTPRPSYDDDGGGGAEGGGGGGGGGDGNTSRRRRDRDH
RSSGRPRGDDSRGREDDVPADRKRNRRDADGRNGYSSGSANGHARKGSSG
STTTTTNGDGGRKYSQQEASELKASWLRANIRVRVVHKSYAGGRAYLGKG
RVVDVPRVGQATVRMDVGDLVLEDAKERHLETVLPARGGKVIVVRGTEKG
ATGKLLARNKEKETAMVQVYEDLRVVTLSLDDVAEFTGMLDEDMDDVGY*
back to top

mRNA from alignment at P-littoralis_Contig654:9749..20362+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig654.6.5 ID=mRNA_P-littoralis_Contig654.6.5|Name=mRNA_P-littoralis_Contig654.6.5|organism=Pylaiella littoralis U1_48|type=mRNA|length=10614bp|location=Sequence derived from alignment at P-littoralis_Contig654:9749..20362+ (Pylaiella littoralis U1_48)
CACACCTGTCTTCCCTTCGCGGGCTTGGCGGTCCTCTCAAGGGATCAAAG TACACGGGTACCGTTCTGTAGTTGCCGTATCCAAGTTCTTCACAGTGTGA ACCTCGTGTGTGTGCTGGTGCCGCCCACAACAGCGAGTCGAAGGGAGAAG CACGTCCCGTTCTATACGAGGGGAACGGGGAAGCGGAACGGTCGCGCGGA GCGTTTGACACGAGCGCACCGACATAACGAAGGCGGGCGTGACCTTTCTA GCCAGCTGCTTCCGGCGGCAGGCAAAAGCCAGGCAACATCACCATGGTGA GCTCCAAGCCTAAGCCCAAGGGCTTTTCGATGTCCCTGAACAAGTCCAAA TCAGCAGCAGCAGCAGCAGCATCATCATCATCATCCGCTGCTGCTGCAAC GGCAAAGGGAGGAGGTCGTGGCGTGGGCACCGGCAGTAGCGCCAAGCCTT CGTCGGCGATCGGCGTAGCACATGACGACGATGACGACAACATTCATGGC GAAGGGGGAAGAGGAGGGGGTGGCAAGCGCGACTTTGTGACTGGTATTGG CGGGGGCAAGGTTGTCACCAAGGAAGTCGTCGTGGAGCGGGGACCCCGCG TCATTGCCCTCGCCTCCAACCCCTGGGCTAACGGCAGCAGCAGCAGCAGC AATACCGCTGCTGCTGCTGTTTCTCCGCCGGCAACGGCAGCAGCAGCAGC AGCAGCAGCGAATGACGCACCAGCACCGGAGAAATCGCTGGACCAACTAG CGGCCGAGGCAATCGCCCGAGAATCCCGCCGCGGTGACGGCGACGGGGCC GCCACTGACGGCTACGGTCTTGGTCTCGACTCCGACAGAGTTATCGGCAT GGTGGGCAAGACCGGCGACAACAGCAGCGAGGCAACGGCAGCAGGAGCAG GAGCAGGAGCGAGCGCCAGCAGCGGCGGCAACAAGAAGAGGACGGGTATT CTGGAGCAGAACATGATTCCCGGCCTCATGGACGTGGACGGAGAAGACGC CAAGTTTAAGCACGACCTCGGTCATCGAGCGGAGGACCTCACCGCGCGCA GCAAGGCCTACGTCGACGTTCCGGTTGCAGAGTTCGGTGCGGCGCTGCTC AGGGGGATGGGGTGGCAGGGGCCGGAAGGCGATGGCGGCGGTGGGGCGGG GGGGGCTGGGGCGGGCTTGTCGAATGAAATTGAGCCTAGGCATCACAGGC TCGGATTGGGGGCGCAGCCCAAACCTCCCGAAGAGGTGCGTAGGGTATGC TTATAGGGGCTGGTCACGAGAAACCGCCGAGCTATTCTCGAGTGATGAAT CTCTCGACGTGTATCAAACGGCAGGTTTATTTTTGTGCTATGTCATCATA TGTATCATACTGCTCTATTATATGGTTTTATGGCGTTGGTTTTTGGCTTG GTTTCTTGTCCCATGCGGCGTCGTTCTCATGAGGCAACAGCAGTCTCAAT TGGTTTGCAGAGCAGGCACGCGGTGGCGAGGCCGCATTGAAAACACTGGG GGGGAAGGAGTGTTGTCTGCTGCCTCCTGCACCGGCTGGTTTTTTGTCTC ACACCGTCAAACGCTATCTACCACCTACCACCTCTTACGTTCCATCGTGC GAAGTGTCCCAGAAAGCTCGCGCAGCGGACACGACTTTTGTGGGAGAGAA GCTCGTTGTGATTCAAGCTTCTGTATGGAAGTACTGGCGTGTGAGATATG CGCTTGACCTTCTGTCCGAGCGCTTTTCCTATCTGGTAACACTTATCTAG CCTCGTTTTATTTTCTCTCGTGAGAACCCAATGTCCAGCGGGGAGCCCAA CGCGACGTAGTCTACCCGTGCCAAAAAGTTGTGGATTTCATCTGTCTCCA TCACATGAGTCTTCGCGTTTCTTTGTGTTACATCGTTGTACACTGCCGTA GCATCCGGTGAGTGAAACCTCCGACGTATCACGGGTCCGGTCCGGCACGC CTATCAAAGTATAGGCTAAGCACAAACACGCCCTGGGTTGCCGGTCGCCC TTTCTCCCGCCTCCTCTTAGTAGTGTTTGTTTTCCATGGCTCGAGCATCC TCCCGGTTACCTCTCACACATCACGAGACGAGGTGCAACGCAGGAGCTGT GGCGTCTGTCCTCGTAAGACTACGGAAGACCTGCCGCCGCAACAGCCAAG ACATCGACGGCTATGGGGAAAATCTCCGGCCCCCGACCCCCCCAACCCTC TCTCAATCACCGTGGCGCGCGCGCTCCCCATTTCTAATCAAAAGTGTATC CTCTCAGTATTCTCTCGCACCCTAGACAAGGCAAAAGTTTGTCTTTCGCA CGCACACGCCACGTACCACGCCCGACTGCCGCGCTCATCTATTTCTGTAT TTGTGTTTCCGAAAGTCCCTGTGTGACCGTACTCCTGTATAACCCCAGAT GATGCGCCGACATTACATACCGAACGATGAAGACTGACGCTCAAAAGAGA TGGAGTGATTTATGAGCAACAACGTAACATGCGTTTGTTTTTTTGTTTTT TATTCCCGCCGCTGTCGTCGCTGTGGCGCGTTCGTGCCGCCATCCCAGAT GAAAAAGCCGCGCAAGAGGAAACCCGGGGAGAAGGCGAGGAGCTCGGACG CGGAACGCCTGAAGGTGACTTTTTTTTTTGGTCAAGATCATTTGGCACCG TACTTCGTAAAACGACAAAGTCGATGCAAAACTTGAAAGGAGGGAGACGG CAACGCTCACCCGGGGTGGGATGGATGGGTTGGGGGATGGCCTGTCAGAT CACGCAAGTACGAGTGTGGTTTGATTGTGTTAGCTTGCTGCTGAAATCGT TGTTTTGCTGGTTCGAGTTGTAGGATGAACCCCATCTATGCTCTTCTGGC CTGCATGTATGCGCCGTCTTCCCGCTCTCACAAAGTAGGCCAGAAGCATA TATCTACTACTGTATTGGGGTGCTATTGCAGTTGCAGTTGTCGGGCACGC TCTTGTCCCTGTTCCTGGTACCGACTGCTCCTCCAACCCCCCCGCCTGTT ACATGGCTGGTGGTTGAAAACCTGATGTGCTGCGTCCCTGAATTCCACTG GTAGGGTATTAGGGATGTTCGGTCAGTGGTCGAATGGTCGAAAGACAAAG GCAGTCAACGCTTGGGTACCCCCCACTGCTGGTGTTCCTCTCACCTTCAC ACATCGCGGACTTGTCTGTTCACCACGGGGGGAAGCAGGGATGTTGGAGG TGTATGTACTGCGCGTCAAATCTCGTTGTCGTTGTTATGCTTTACTTTGT TTCATTTTATCGCTTTTGTCAAGATTTGGGAGCAAAAGCTCCAGGAGGAA CGGTCACGCGCGTCACAGCAGTCCGGTAATTCTAAACAGCTGTCGGTGAT GGATGTGGTGGAGCTGTCGGAGGAGGGGGGCAACGATGGAAAAAGAGGGA ACGGAGGGCAACGCCCGCGGGCGATGGTGCTCAAGACGCAAGGAGTTCCC GGGCTGAACAAGATTTCTGTCAGGTGTGCTGCTCATCTCTCGATCTGTCT GTCCGTCCGTCTGCCTCTCTGTAACTCTGTCTCTTTGTCTGCCTCTCTGC CTGCCTGCCTGTCTCTTTGTCTGTCTCTGTCTGTCTTTCTGGTTGTCTCT TTGGCTCACGGTCTCCCTGCCTGCCAGTCTCTCCAGTTATCTGCCTCTCT GTCTCTCCGTCTCTCTGTCTCTCTCTGACAGTCTCTCTGTCTCTCTGTCT CTCTGTATACCTGTCTCTCTGCCTCGCTGTGGCTCCATCTTTCTCGTCCA CGTCCACAACGCGAGTCTTCTTGTTGGGCTGGGGAGGAAGGCGTAAGCGG TTGCTGATACTTGTAGCCATCGTCTTTTGAACCACTGACCACGCATCCAT CCCTTTCGCAACGCAGCACCGCTAGGTCGTGCGGCGGGGGGGAGAGGCTT TTCTCGCGGGTGGTATGTAGTTGGGTCGGAAACAGCAGTGCTGCCTGCAG TAACGCGTGCAGGATATTACTGTCGACTTTCTTTGAAGGTTTTTCTTTGT ATGGTCAAAATTTACCGGCAGTGCTGCTGCTTTGTCGTTCTGCTGTCGGC GCTTTTTCTTACTCCTTTCCTTCTTGTTTTTTTCTTTCTCCTTTTTTTAA TTTGAGCAAACGCTCCCCGTGCCGGTTCGACCGTCCCCTCGTTGGTGCTA AGACCTTTTTTTAATTGTTTCTTGTGCGGGAGGTGCACGTGTAGCGGAAA GTAGTTTGCTTGTGTGCTCTCCCGCGATATCACTCAGAACAGAGCGTGCA AGAGCAGGCGACGTCTCGGAAGAGGGCTCGTGGTCCACGTTACGGCGTAA CGCCAGTTGAACAAACGAGCTCCCCTCTCCCGCACCCATCGTGGCCGTGT TTTTATCAACGAGGGCGCGCACTCGATCGACTTTTTTCGTTGTTGACAAA AATGTTTTGTGTATCATAGGATGGAAGACACTGGAGAGAAGGTTCTCGTG GACAAGTCGAGCGCGACCCGAGTGTCAGAGGACGACTTGGCACGGCGGCC CTTCTCCGAGAACAAGAACAAGAGCAAGAGCAGTCGCTCTTCAGAGAAGA ACTTAAACGCCTCCCCTAGTGACGACAGGAACTCCCGCCGGGAACGGGAC GACGACGAAGGCGGCGGCGGCGCCGGTAGTAGGGCGGAGAACGGAAGCGC AAAGAGGAGCCGGAGTCGGAGCTTCGACCGCGGCGTATCGGAAGAAAGGT GGGGTAGGGTTGACTCATTCCCGATTCATTGTCGATCCGTTGTCTCGAAC CATCCTTTGATTCCATTTTTGGGTCTGTTGTTGCGGGGACGGTCTGTCTG GTCTGTGCGCTTTGCTGTTGGGACTGTGCGCTTTGGCTGACGGGACTGTG CGCTTTTGCTGACGGGGCTATTCCTCACGAGGCAGGATCGGGATTTGGTA CACACGTTTATAGGGAACTGCTGTTGAGGGTGGGTATATACGCGGGAGAG GCGAGAGAGGTGTGTGCGTGTGTGTGCATGTGCTGGAGAGGGTGCGGTGC CACCGTTTCGCCGCTTCGGGACGAGAATGGCAGGGGGTGTAGGTACGGGA GAGAGGCTACGATACGGACAAGTCTTACACGAAAAGTTGTCTGTGTGCGT GCGTGTGTGTGTGCTACGATACTGCCAAGTCTTACACGAAAAGTTGCCTG TGTGCGTGTGTGTGTGTCAACAGTATCATATGTGCCCACGTTTGCGTGGA GGGCCGCGTTCTGTTTTTTTTTTCTTCAGGAGCTGTTTTTTTCCCCTCAA AGCCATCCGATAACACCTGGTTAGGTCTACGATACGCGACGTGTGGGCAT AGCTTTCATACGTATTGCCGAGCGGATGGTGCAAGCGAGGTGCAGGAACA ACGTTCCGCTTTCTTGTCCCGGCTCGCGTGTATTATTGCTGTTTCCACTC TGGCTACGTATTGCCGAGCGGTTGGCGCAAGTGAGGTGTAGGGATAACTA ACTTTTCATCCTTTGCTCTTGAGCCGGCTCGTGTGTCTTCTTGCTGACGC ACTCTAGCTGCGTGTGTAACGCACGAAGGTGTTGCGTTACACGCGTACCT GTGAAAAATATTCCAGTCTTGTACGTAAAGCTAACAGATTACTGTTGTCC GCTGTGGCCGTGGCGTGTTGGCGTGACTTTTCCCAGGAGTGATGCCGAAG AGCGGGGCCGAAGAGACGGCGGCAAAAAGTCCAAGAGTTCGAAAAAGGAC AAGAAAAAGCACAAGAAGAGTAGCAGCAACAGCGGCAGCAGCAGCAGCGG CAGCGGCACCGGTACGAGCTTCAGCAAACGACAGCGAGAGCGAGAGCGAG AGCGAGGGCCAAGCGTCGACGGGCGGTGGGGGTCCCCTACCCCCCGACCC TCCTACGACGACGATGGTGGCGGCGGCGCGGAAGGAGGAGGAGGAGGAGG AGGAGGAGGAGACGGAAACACCAGTCGGCGACGACGGGACCGTGATCACC GCAGCAGTGGTAGACCGAGGGGTGACGACAGCAGGGGACGCGAGGACGAC GTCCCCGCTGACCGAAAACGCAACCGCCGTGACGCCGACGGCAGGAACGG CTACAGCAGCGGCAGCGCCAACGGCCACGCCAGGAAGGGCAGCAGCGGCA GCACCACCACCACCACCAACGGCGACGGCGGCCGGAAGTATTCGCAGCAG GAGGCGTCCGAACTGAAGGCTTCCTGGCTTCGCGCCAACATTCGGGTGCG CGTGGTGCACAAGTCGTACGCCGGGGGTCGGGCTTACCTGGGGAAGGGGA GGGTGGTGGACGTGCCCCGCGTCGGGCAGGCGACCGTTCGGATGGACGTC GGCGATCTCGTCCTCGAAGGTGGTTGGCTGGTTGCTCTTATTTTGGCCAT GGTTCGGTTTCCATTCCTCTTCCTTTCTTTTTTTTTCCTCTTTGTGTGTG TTGCTTTGATGTGTGCGTGTGTGTGTTTATTTTCGTTCCATTTATTTGTG CGTGTGTTTTATTCGTTTTTTTCTTTGTATTTCATACATTTCTCCGCTCC CGGAACTTGGTGTGAGCGATCGATTCAGATGGTTCCCTATACTCGACTCG TCGTTCGCTTCTCGGCGCCACGGACAGCAGGCACTGCCACCATTCTGCTG TCCTACCGTAAACTCGCGAAGTGCACCCCCCCCCCCCCCCCATCTCATGG CACTTTTTCTTGTTGTCCGGACACACGCTTCCGTGACTGACGTGCTGTCG GTACACACTCTGCGCACGTACCACCCGGCCTGTTTTACACTCTCTCTCTC TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCCACGCACACACCTCACCTAC CCAATACGCGACGGACACACAGACGCGAAGGAGCGGCACCTGGAGACGGT GCTGCCCGCGAGAGGCGGTAAGGTTATCGTGGTGCGCGGGACGGAAAAGG GGGCTACCGGAAAGCTGCTCGCCAGGAACAAGGAGAAGGAAACGGCTATG GTACAGGTTAGTCGGCCCTCTATCGCTTACTTGCCACCCAGGCTGCTGGG GCGCTCTACACGGGCCGTAGCCCGCCTTTTGTAATGGCCCGAAGTCCCCA CTTCAGTTGAGTTTTTTTTTCCCACGTGAAATCACACATTTTGTTCGAAA GAAGGGCAACTTGCTTGTGCTTGGCAGGTGAAGGTCGAGATTATGCTCGG GTTGTTTTGTGCTCTCGAAAGGCATTTTTGAGCTCGATCTCATGCTCACG AAGATTACCGAGATTGATGCTCGCAAACTTATCCCCATTTGTTCTACATT TACACCTCTTGTTTATGGTCGCCATATCTGGCTGTCAAAAACAAAGTTTT GCTCAAATGTCAAAACAACATTTGGGAGGCAGACATCCACTTTTCCAAGA TATCGTCCCGCTGTTTATGGAGAAAAATATCTTGTTTCGTAGATCTTCCA AATGCGGCAAAATGTTGGTCTCTTTTTTCTTTTATTCCTTTTTTTTTTGT CGGAAGCTCGCAGGCCCAAGGCCCAAACGTGCGTGTCAGTCTGGCACAGG AGCAGCAGCTGAAGATTGAAGGCAATATCAGAACATCGCAGTCACTTTCT CTCTCACTAAACCACCTGTCAAGGTCAAACCTCTCCGGCTGTCACCTCTA TTCACTGCTCTTTGTCAACAGGGGGTTGAGGTGGCCGTGCATCCGTTCAA TCGGCCGAGAGCAGTATCGCTCCTGGGTCAGATCTGTCAAACTGAAAATA CAGACAACCTATTTTCCTCTCATTTATAAACTTCGAAATAGAGCCCACAA TGTTTTACCGCGGAAATGATTCTTAAGCAGATGTTCGATGCACTGCACAG CGAGCGATGCTTCTCTTGTGCTGATTGCATTTGAGCCCACGGCCAGCCCA AATTCTTGCTGGCGGATAGCGATGAATGGAGATGGTAGCCAACAAGGTTT CGACGGTCCACCAGACGATAATGATTTTGTTAGCTCAGGGAGAGTTCTAG TTCTTCATCGGGCTCTTGGGTTGGGTTCGGTTGCAAGGTTGATGTCGAGG TTCTACAGTTTGTTCCATGTTTCCGTTCACTAATCGTATATTTTGGACGA GTCACGACGAGTTTCAACGTCGACTTTTGTTTATTGTTGATCTCGCATTT ACACCAAAAAATATTAATCCATAGATCATGATTGGTGGAGAAGGGAGTGA GAACACAACTGCTGTGGTATTCTGATATTTTGCCTTCAACACTGCTGCTG CTGCTGCTGTGTGAGCCTGAGGTGTCACACGCACGTCAGTCCACACATAC ATACCTACGTATTGAAGAGCCTCTATTCAAATGATTTTTTTTTTTGCATG CCTGGCGAGCTTTCGCCACACACCAGCAGTAGAGGTGTTGGCACAGTAAC TCCAGGGTTGCACAGAGCCTTTCACCAGCTTGCTGCGTTCAGATTCCATG GCGTAGTGACTGGTGTTGCTTGCTGAAGCGTGGTGGTGTATCGTAATATC ACCGCTGCCAACAAGATATTTGCGACTGCTGGGATGGTCAGTTTTTGAGT CAACTTTGACCGATTTGGTCCAGTTTGGGCCGGTTTGGAAAAGTTTGACG ACATTTTGGACGACATACTTACCCATACGCAGTGAAATAGGTCTTCATTT GAAAAAGTTGACAAACTTTTTCCTTTGACGGCCAGATATGGCGATCGTAA ACATGGGTGTTAATAAAAATGCCATCATAGCTCGTTGAATACTGTACAGC CTCTGTTTGATTTGATGCCGGGGGCGGCGAGAGTAAACAGTTCGTGTCCT GCCGCTGCTTCGTGTTGATCGATGTGAGGGTATGTGGTCATGATTTTGTT CGTTGCTGGTAATTCGAACTGGTACCTCGGTAGTTCGTAAACGCTGTCGT TGCTATCAATGTCGCGACACTTGACTGGCCCCTGCTTTCTATGTAGGCTG TCAGGCGGGAAGGATGGAGCAGGTACAGCAGCCGAAAATATACAGCAGTG AAATGTTTTTTGTATCGGACGAACTGTTGTTCACCCTTTTGAGCCTTCCG AGGAAAAAAATTGGGCATCAGAATCGAGTTTGTTTTTTTTTTCCAGCCCG GACTACTTGGATGCCGGGATCATAAACAAGTGTGTAAATCCTTTGATGAA CGAGACGAATTGGTTGTAGCAGGCGGTTGTGCCGCTCTCCGCGTAGTAGG CGGTAGCGTCGACCGCGGGAAGAACAGACATGGCTGTGTGCTTTATGAGA GCCTTCACCAGGCAGCAATAGCAGCAGCAGCACCAGAAGCGGCAATGGGC ACGCTAAAAAGGTCGAAGGCCTCCATACCCAGGGGATTAGATAATTACAG ATACAGGAAAACCTTCACCCGGGAAAAATCGAGCATTTTTTTCGGGCAAT ATGATGTATTGAATTAGACAGTAGGAGCAAACACACACGAACCAGGGATA CAACATGCTACCTCTGTCGGCTCGTAATAGCGGCCGGGCTATCCTTCTAC CATCTAACCCTAACCCATCTAGCCTGTCGCGGGCCTCTGCCGCGGCCCCT GCGTATTTTTAGCTCGTGCCATGGCTGCTGTGCTGCTGCAATTCTCCAGT CGATTTGCAGGCATTGCGCGGCGACATTGCACGAAACGGAACCTTTTTGC CCGACAGAAAAAAAAAGCAGGCTTCTCGACTAGCCACCTGTGTGAGGAGC CTAGTACCAGGAGGGTTAGACTATTCCCGTTTTCTTTTGGACGGGCGCGC GGAACAACTCGTGACCCTTTGTGGTTCTCGCTCCCTGTCGCAATTGTTTG CTCCCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCACGGAGTGTTGCGAT ACCATAGTCGACATGTGGTCCCATGCCTCGCAGCTGGCGACGTCCTTACC CGTGGTCGAACGCTCTGCGACGCCGTCGAGATACGTGGGGATGGGCCATG CTAGTCTAGTGCACACGGACCACCACCACCACCGTCGCGGATCGGATGGT AACTGATCCCCCACCCCCCCCCCCGGGCTCCTTGTGCTTTCTTCGTTCTT GCGTTCGTCGGGCACTGAATGTTTGGTGTTTCCTTGTTTGGTCGGCAGGT GTACGAAGATCTGCGGGTAGTAACGCTGTCCCTCGACGACGTCGCCGAGT TCACCGGCATGCTTGACGAGGACATGGATGACGTCGGTTACTGACACACC CATACTTTTCAAGCATGGTTCTCGGATATTGCTGAGACCGCCGGATTCAA TAGAAAATGATCAGAAAAGCCGGAGTTCTGGATGACGGCAAGTAGACATA TCGTCGTCGACGCCAGTGTGAAAAGAGGGAATCCGTCCTCGACGGACGTT GTGGGAAGGTACCCCGATGAAGGGGTCCTCTTCTACAGAGTTATTTTTTT GCTTGTTTGCGAGTACACGAGTATGCATCATACGCAAAACTAACCCAAGG GTTGCCGACTTTTCTGTGATTGCTTTTTCCGAGTACAACCTTGCTGTTCA CAAAGGTCTCGGGCGTGTTGAGAATCAGCAGGTAACGGCGAATTGTTCGA CATGCTCGAAGTCGACATAGATCACGACGGCAAATACCGCCGGAAAACAT CTTCCAAAAATTCAAAATTTAGAAAAATGAAGCTCGGAGCGTGCCGTTTA TTTTTACTTTTTGC
back to top

Coding sequence (CDS) from alignment at P-littoralis_Contig654:9749..20362+

>mRNA_P-littoralis_Contig654.6.5 ID=mRNA_P-littoralis_Contig654.6.5|Name=mRNA_P-littoralis_Contig654.6.5|organism=Pylaiella littoralis U1_48|type=CDS|length=2400bp|location=Sequence derived from alignment at P-littoralis_Contig654:9749..20362+ (Pylaiella littoralis U1_48)
ATGGTGAGCTCCAAGCCTAAGCCCAAGGGCTTTTCGATGTCCCTGAACAA
GTCCAAATCAGCAGCAGCAGCAGCAGCATCATCATCATCATCCGCTGCTG
CTGCAACGGCAAAGGGAGGAGGTCGTGGCGTGGGCACCGGCAGTAGCGCC
AAGCCTTCGTCGGCGATCGGCGTAGCACATGACGACGATGACGACAACAT
TCATGGCGAAGGGGGAAGAGGAGGGGGTGGCAAGCGCGACTTTGTGACTG
GTATTGGCGGGGGCAAGGTTGTCACCAAGGAAGTCGTCGTGGAGCGGGGA
CCCCGCGTCATTGCCCTCGCCTCCAACCCCTGGGCTAACGGCAGCAGCAG
CAGCAGCAATACCGCTGCTGCTGCTGTTTCTCCGCCGGCAACGGCAGCAG
CAGCAGCAGCAGCAGCGAATGACGCACCAGCACCGGAGAAATCGCTGGAC
CAACTAGCGGCCGAGGCAATCGCCCGAGAATCCCGCCGCGGTGACGGCGA
CGGGGCCGCCACTGACGGCTACGGTCTTGGTCTCGACTCCGACAGAGTTA
TCGGCATGGTGGGCAAGACCGGCGACAACAGCAGCGAGGCAACGGCAGCA
GGAGCAGGAGCAGGAGCGAGCGCCAGCAGCGGCGGCAACAAGAAGAGGAC
GGGTATTCTGGAGCAGAACATGATTCCCGGCCTCATGGACGTGGACGGAG
AAGACGCCAAGTTTAAGCACGACCTCGGTCATCGAGCGGAGGACCTCACC
GCGCGCAGCAAGGCCTACGTCGACGTTCCGGTTGCAGAGTTCGGTGCGGC
GCTGCTCAGGGGGATGGGGTGGCAGGGGCCGGAAGGCGATGGCGGCGGTG
GGGCGGGGGGGGCTGGGGCGGGCTTGTCGAATGAAATTGAGCCTAGGCAT
CACAGGCTCGGATTGGGGGCGCAGCCCAAACCTCCCGAAGAGATGAAAAA
GCCGCGCAAGAGGAAACCCGGGGAGAAGGCGAGGAGCTCGGACGCGGAAC
GCCTGAAGATTTGGGAGCAAAAGCTCCAGGAGGAACGGTCACGCGCGTCA
CAGCAGTCCGGTAATTCTAAACAGCTGTCGGTGATGGATGTGGTGGAGCT
GTCGGAGGAGGGGGGCAACGATGGAAAAAGAGGGAACGGAGGGCAACGCC
CGCGGGCGATGGTGCTCAAGACGCAAGGAGTTCCCGGGCTGAACAAGATT
TCTGTCAGGATGGAAGACACTGGAGAGAAGGTTCTCGTGGACAAGTCGAG
CGCGACCCGAGTGTCAGAGGACGACTTGGCACGGCGGCCCTTCTCCGAGA
ACAAGAACAAGAGCAAGAGCAGTCGCTCTTCAGAGAAGAACTTAAACGCC
TCCCCTAGTGACGACAGGAACTCCCGCCGGGAACGGGACGACGACGAAGG
CGGCGGCGGCGCCGGTAGTAGGGCGGAGAACGGAAGCGCAAAGAGGAGCC
GGAGTCGGAGCTTCGACCGCGGCGTATCGGAAGAAAGGAGTGATGCCGAA
GAGCGGGGCCGAAGAGACGGCGGCAAAAAGTCCAAGAGTTCGAAAAAGGA
CAAGAAAAAGCACAAGAAGAGTAGCAGCAACAGCGGCAGCAGCAGCAGCG
GCAGCGGCACCGGTACGAGCTTCAGCAAACGACAGCGAGAGCGAGAGCGA
GAGCGAGGGCCAAGCGTCGACGGGCGGTGGGGGTCCCCTACCCCCCGACC
CTCCTACGACGACGATGGTGGCGGCGGCGCGGAAGGAGGAGGAGGAGGAG
GAGGAGGAGGAGACGGAAACACCAGTCGGCGACGACGGGACCGTGATCAC
CGCAGCAGTGGTAGACCGAGGGGTGACGACAGCAGGGGACGCGAGGACGA
CGTCCCCGCTGACCGAAAACGCAACCGCCGTGACGCCGACGGCAGGAACG
GCTACAGCAGCGGCAGCGCCAACGGCCACGCCAGGAAGGGCAGCAGCGGC
AGCACCACCACCACCACCAACGGCGACGGCGGCCGGAAGTATTCGCAGCA
GGAGGCGTCCGAACTGAAGGCTTCCTGGCTTCGCGCCAACATTCGGGTGC
GCGTGGTGCACAAGTCGTACGCCGGGGGTCGGGCTTACCTGGGGAAGGGG
AGGGTGGTGGACGTGCCCCGCGTCGGGCAGGCGACCGTTCGGATGGACGT
CGGCGATCTCGTCCTCGAAGACGCGAAGGAGCGGCACCTGGAGACGGTGC
TGCCCGCGAGAGGCGGTAAGGTTATCGTGGTGCGCGGGACGGAAAAGGGG
GCTACCGGAAAGCTGCTCGCCAGGAACAAGGAGAAGGAAACGGCTATGGT
ACAGGTGTACGAAGATCTGCGGGTAGTAACGCTGTCCCTCGACGACGTCG
CCGAGTTCACCGGCATGCTTGACGAGGACATGGATGACGTCGGTTACTGA
back to top