mRNA_P-littoralis_Contig653.8.5 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig653.8.5 vs. uniprot
Match: D7G5E8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5E8_ECTSI) HSP 1 Score: 323 bits (828), Expect = 2.890e-108 Identity = 165/235 (70.21%), Postives = 188/235 (80.00%), Query Frame = 1
Query: 1 MAWATLMKLREALVKRAGEIYARRHPPAPGESSVDGKDLTSEQLESVAEEVFEELGNMDQTPVQHEMPAETTVIRTLALPQEVRVNCGKEKERFTLCLAVTADGQKVPVRIIFKGTPFIPTVT-GVGRATQPRENSIAAEILPQNRRKFGHPMGGMSFGVQEESWCDLRECTLWIKESWRVRPNNGSVLKRRACILVLDDFQVPQGRRVHRLPQEGHQHHRHLHPRRVDSSPPTA 702
MAWATLMKLREALV+RAGEIYARR+PPAPGES + G+DLTSEQLESV EVF ELGNMDQTPVQHEM ET + +T A + GKEKERFTLCLAVT DG+KVP+RIIFKGTPFIP G G+ATQP +NSIA E+LP NR K G+P+GG SFGVQE+SWCDLREC LWIK SW +RP+NGS++K+R L + QVPQGR +HR QE +HHRHLHP RVDSSPP A
Sbjct: 1 MAWATLMKLREALVERAGEIYARRNPPAPGESPIKGEDLTSEQLESVTAEVFVELGNMDQTPVQHEMLVETALEKTGAKDARIATG-GKEKERFTLCLAVTGDGKKVPLRIIFKGTPFIPPDRPGKGKATQPWKNSIAWEMLPGNRSKNGYPVGGTSFGVQEKSWCDLRECKLWIKHSWTLRPDNGSLVKQRPLHLGTERLQVPQGRHLHRRTQEAGKHHRHLHPGRVDSSPPAA 234
BLAST of mRNA_P-littoralis_Contig653.8.5 vs. uniprot
Match: D7FXD3_ECTSI (DDE-1 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXD3_ECTSI) HSP 1 Score: 295 bits (756), Expect = 5.760e-97 Identity = 147/202 (72.77%), Postives = 169/202 (83.66%), Query Frame = 1
Query: 1 MAWATLMKLREALVKRAGEIYARRHPPAPGESSVDGKDLTSEQLESVAEEVFEELGNMDQTPVQHEMPAETTVIRTLALPQEVRVNCGKEKERFTLCLAVTADGQKVPVRIIFKGTPFIPTVT-GVGRATQPRENSIAAEILPQNRRKFGHPMGGMSFGVQEESWCDLRECTLWIKESWRVRPNNGSVLKRRACILVLDDFQ 603
MAWATLMKLREALV+RA EIYARR+PPAPGES + G+DLTSEQLESV EVF ELGNMDQTPVQHEMP ET++ +T A + GKEKERFTLCLAVT D +KVP+R IFKGTP IP G G+ATQPR+NSIA E+LP+NR K G+P+GGMSFGVQE+SWCDLREC LWIK SW +RPNNGS++K+R CILVLDDF+
Sbjct: 1 MAWATLMKLREALVERADEIYARRNPPAPGESPIKGEDLTSEQLESVTAEVFVELGNMDQTPVQHEMPVETSLEKTGAKDARIATG-GKEKERFTLCLAVTGDCKKVPLRTIFKGTPLIPPDRPGKGKATQPRKNSIAWEMLPENRSKNGYPVGGMSFGVQEKSWCDLRECKLWIKHSWTLRPNNGSLVKQRPCILVLDDFK 201
BLAST of mRNA_P-littoralis_Contig653.8.5 vs. uniprot
Match: A0A6H5K8Y4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K8Y4_9PHAE) HSP 1 Score: 302 bits (774), Expect = 6.750e-91 Identity = 145/202 (71.78%), Postives = 174/202 (86.14%), Query Frame = 1
Query: 1 MAWATLMKLREALVKRAGEIYARRHPPAPGESSVDGKDLTSEQLESVAEEVFEELGNMDQTPVQHEMPAETTVIRTLALPQEVRVNCGKEKERFTLCLAVTADGQKVPVRIIFKGTPFIPTVT-GVGRATQPRENSIAAEILPQNRRKFGHPMGGMSFGVQEESWCDLRECTLWIKESWRVRPNNGSVLKRRACILVLDDFQ 603
MAWATLMKLR+AL++RAGEIYA+R+PPAPGES + G+DL+S QLE V +E+FEELGNMDQTPVQHEMP ETT+ T A + GKEKERFTLCLAV+ADG+KVP+RIIFKGTPF+P T G G+ATQPR+NSIA E+LP NR K G P+GGMSFGVQE+SWCDLREC LWIK+SW++RPNNGS++++R CILVLDDF+
Sbjct: 217 MAWATLMKLRKALLERAGEIYAQRYPPAPGESPIRGEDLSSSQLELVTDELFEELGNMDQTPVQHEMPVETTLENTGAKDARIATG-GKEKERFTLCLAVSADGKKVPLRIIFKGTPFVPPATPGKGKATQPRKNSIAWEVLPANRSKHGLPVGGMSFGVQEKSWCDLRECKLWIKDSWKLRPNNGSIVRQRRCILVLDDFK 417
BLAST of mRNA_P-littoralis_Contig653.8.5 vs. uniprot
Match: A0A6H5K6L9_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K6L9_9PHAE) HSP 1 Score: 283 bits (724), Expect = 2.770e-89 Identity = 143/203 (70.44%), Postives = 167/203 (82.27%), Query Frame = 1
Query: 1 MAWATLMKLREALVKRAGEIYARRHPPAPGESSVDGKDLTSEQLESVAEEVFEELGNMDQTPVQHEMPAETTVIRTLALPQEVRVNCG-KEKERFTLCLAVTADGQKVPVRIIFKGTPFIP-TVTGVGRATQPRENSIAAEILPQNRRKFGHPMGGMSFGVQEESWCDLRECTLWIKESWRVRPNNGSVLKRRACILVLDDFQ 603
MAWAT+MKLREALVKRAGEIYARRHPPAP ES + G+DLTSEQL SV EVFEELGNMDQTPVQHE+P ETT+ +T A ++ R++ G KEKERFTL LAV ADG+KV RIIFKGTPF P TV+G G++T PR+NS+A EI P NR K GHP GMSFGVQE+SW D REC WI SW++RPNNGS++++R CILVLDDF+
Sbjct: 63 MAWATVMKLREALVKRAGEIYARRHPPAPDESPIKGEDLTSEQLASVEAEVFEELGNMDQTPVQHEIPVETTLEKTGA--KDARISTGGKEKERFTLVLAVMADGKKVSPRIIFKGTPFTPPTVSGKGKSTLPRKNSVAWEIHPANRAKHGHPANGMSFGVQEKSWSDQRECNGWISGSWKLRPNNGSIVQQRPCILVLDDFK 263
BLAST of mRNA_P-littoralis_Contig653.8.5 vs. uniprot
Match: A0A6H5KE45_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KE45_9PHAE) HSP 1 Score: 284 bits (727), Expect = 1.700e-88 Identity = 142/227 (62.56%), Postives = 173/227 (76.21%), Query Frame = 1
Query: 1 MAWATLMKLREALVKRAGEIYARRHPPAPGESSVDGKDLTSEQLESVAEEVFEELGNMDQTPVQHEMPAETTVIRTLALPQEVRVNCG-------------------------KEKERFTLCLAVTADGQKVPVRIIFKGTPFIPTVT-GVGRATQPRENSIAAEILPQNRRKFGHPMGGMSFGVQEESWCDLRECTLWIKESWRVRPNNGSVLKRRACILVLDDFQ 603
MAWATLMKLR+AL++RAGEIYA+R+PPAPGES + G+DL+S QLE V +E+F++LGNMDQTPVQ+EMP ETT+ +T A + G KEKERFTLCLAV+ADG KVP+RIIFKGTPF+P T G G+ATQPR+NSIA E+LP NR K G P+GGMSFGVQE+SWCDLRE LWIK+SW++RPNNGSV+++R CILVLDDF+
Sbjct: 150 MAWATLMKLRKALLERAGEIYAQRYPPAPGESPIRGEDLSSSQLELVTDELFKDLGNMDQTPVQYEMPVETTLEKTGAKDARIATGAGVCCIRTILKPLPYPPTSCILPPPPGKEKERFTLCLAVSADGTKVPLRIIFKGTPFVPPATPGKGKATQPRKNSIAWEVLPANRSKHGLPVGGMSFGVQEKSWCDLREYKLWIKDSWKLRPNNGSVVRQRRCILVLDDFK 376
BLAST of mRNA_P-littoralis_Contig653.8.5 vs. uniprot
Match: A0A6H5KRZ1_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KRZ1_9PHAE) HSP 1 Score: 283 bits (724), Expect = 5.700e-88 Identity = 136/202 (67.33%), Postives = 168/202 (83.17%), Query Frame = 1
Query: 1 MAWATLMKLREALVKRAGEIYARRHPPAPGESSVDGKDLTSEQLESVAEEVFEELGNMDQTPVQHEMPAETTVIRTLALPQEVRVNCGKEKERFTLCLAVTADGQKVPVRIIFKGTPFIPTVT-GVGRATQPRENSIAAEILPQNRRKFGHPMGGMSFGVQEESWCDLRECTLWIKESWRVRPNNGSVLKRRACILVLDDFQ 603
MAWATLMKLR+AL++RAG+IYA+R+PPAPGE+ + G+DL+S QLE V +E+FEELGNMDQTPVQHE P E R + R+ +ERFTLCLAV+ADG+KVP+RIIFKGTPF+P T G G+ATQPR+NSIA E+LP NR K G P+GGMSFGVQE+SWCDLREC LWIK+SW++RPNNGS++++R CILVLDDF+
Sbjct: 187 MAWATLMKLRKALLERAGKIYAQRYPPAPGENPIRGEDLSSSQLELVTDELFEELGNMDQTPVQHETPVERLWKRPVR-----RMPASPPEERFTLCLAVSADGKKVPLRIIFKGTPFVPPATPGKGKATQPRKNSIAWEVLPANRSKHGLPVGGMSFGVQEKSWCDLRECKLWIKDSWKLRPNNGSIVRQRRCILVLDDFK 383
BLAST of mRNA_P-littoralis_Contig653.8.5 vs. uniprot
Match: A0A6H5JUK2_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUK2_9PHAE) HSP 1 Score: 277 bits (708), Expect = 1.760e-87 Identity = 140/203 (68.97%), Postives = 165/203 (81.28%), Query Frame = 1
Query: 1 MAWATLMKLREALVKRAGEIYARRHPPAPGESSVDGKDLTSEQLESVAEEVFEELGNMDQTPVQHEMPAETTVIRTLALPQEVRVNCG-KEKERFTLCLAVTADGQKVPVRIIFKGTPFIP-TVTGVGRATQPRENSIAAEILPQNRRKFGHPMGGMSFGVQEESWCDLRECTLWIKESWRVRPNNGSVLKRRACILVLDDFQ 603
MAWAT+MKLREALV+RAGEIYARRHPPAP ES + G+DLT EQL SV EVF+ELGNMDQTPVQHEMP ETT+ +T A ++ R++ G KEKERFTL LAV ADG+KV RIIFKGTPFIP V+G G++T PR+NS+A EI P NR K HP GMSFGVQE+SW D REC WI SW++RPNNGS++++R CILVLDDF+
Sbjct: 63 MAWATVMKLREALVRRAGEIYARRHPPAPDESPIKGEDLTFEQLASVEAEVFKELGNMDQTPVQHEMPVETTLEKTGA--KDARISTGGKEKERFTLVLAVMADGKKVSPRIIFKGTPFIPPAVSGKGKSTLPRKNSVAWEIHPANRAKHDHPANGMSFGVQEKSWSDQRECNGWISGSWKLRPNNGSIVQQRPCILVLDDFK 263
BLAST of mRNA_P-littoralis_Contig653.8.5 vs. uniprot
Match: A0A6H5KEE8_9PHAE (DDE-1 domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KEE8_9PHAE) HSP 1 Score: 281 bits (718), Expect = 5.060e-87 Identity = 138/202 (68.32%), Postives = 164/202 (81.19%), Query Frame = 1
Query: 1 MAWATLMKLREALVKRAGEIYARRHPPAPGESSVDGKDLTSEQLESVAEEVFEELGNMDQTPVQHEMPAETTVIRTLALPQEVRVNCGKEKERFTLCLAVTADGQKVPVRIIFKGTPFIPTVT-GVGRATQPRENSIAAEILPQNRRKFGHPMGGMSFGVQEESWCDLRECTLWIKESWRVRPNNGSVLKRRACILVLDDFQ 603
MAWATLMKLR+AL++RAGEIYA+R+PPAPGES + G+DL+S QLE V +E+FEELGNMDQTPVQHE A GKEKERFTLCLAV+ADG+KVP+RIIFKGTPF+P T G G+ATQPR+NSIA E+LP NR K G P+ GMSFGVQE+SWCDLREC LWIK SW++RPNNGS++++R CILVLDDF+
Sbjct: 204 MAWATLMKLRKALLERAGEIYAQRYPPAPGESPIRGEDLSSSQLELVTDELFEELGNMDQTPVQHERDAG-----------------GKEKERFTLCLAVSADGKKVPLRIIFKGTPFVPPATPGKGKATQPRKNSIAWEVLPANRSKHGLPVEGMSFGVQEKSWCDLRECKLWIKGSWKLRPNNGSIVRQRRCILVLDDFK 388
BLAST of mRNA_P-littoralis_Contig653.8.5 vs. uniprot
Match: A0A6H5KII4_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KII4_9PHAE) HSP 1 Score: 271 bits (693), Expect = 5.050e-85 Identity = 137/198 (69.19%), Postives = 163/198 (82.32%), Query Frame = 1
Query: 16 LMKLREALVKRAGEIYARRHPPAPGESSVDGKDLTSEQLESVAEEVFEELGNMDQTPVQHEMPAETTVIRTLALPQEVRVNCG-KEKERFTLCLAVTADGQKVPVRIIFKGTPFIP-TVTGVGRATQPRENSIAAEILPQNRRKFGHPMGGMSFGVQEESWCDLRECTLWIKESWRVRPNNGSVLKRRACILVLDDFQ 603
+MKLREALVKRAGEIYARRHPPAP ES + G+DLTSEQL SV EVFE+LGNMDQTPVQHEMP ETT+ +T A ++ RV+ G +EKERFTL LAVTADG+KV +RIIF GTPFIP TV+G G++T PR+NS+A E+ P NR K GHP GMSFGVQE+SW D REC W SW++RPNNGS++++R CILVLDDF+
Sbjct: 2 VMKLREALVKRAGEIYARRHPPAPDESPIKGEDLTSEQLASVEAEVFEDLGNMDQTPVQHEMPVETTLEKTGA--KDARVSTGGEEKERFTLVLAVTADGKKVSLRIIFMGTPFIPPTVSGKGKSTLPRKNSVAWEMHPTNRAKHGHPANGMSFGVQEKSWSDQRECNGWTSGSWKLRPNNGSIVQQRPCILVLDDFK 197
BLAST of mRNA_P-littoralis_Contig653.8.5 vs. uniprot
Match: A0A6H5JHT8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHT8_9PHAE) HSP 1 Score: 274 bits (700), Expect = 2.100e-83 Identity = 136/202 (67.33%), Postives = 160/202 (79.21%), Query Frame = 1
Query: 1 MAWATLMKLREALVKRAGEIYARRHPPAPGESSVDGKDLTSEQLESVAEEVFEELGNMDQTPVQHEMPAETTVIRTLALPQEVRVNCGKEKERFTLCLAVTADGQKVPVRIIFKGTPFIP-TVTGVGRATQPRENSIAAEILPQNRRKFGHPMGGMSFGVQEESWCDLRECTLWIKESWRVRPNNGSVLKRRACILVLDDFQ 603
MAWAT+MKL EALVKRAGEIYARRHPPAP ES + G+DL SEQL SV EVFEE+GNMDQ PVQHEMP ETT+ +T A + G EKERFTL LAVTADG+KV RIIF+GTPFIP TV+G G++T+PR+N +A E+ P NR K GHP GMSFGVQE+SW D REC WI SW++RPNNGS++++R ILVLDDF+
Sbjct: 257 MAWATVMKLCEALVKRAGEIYARRHPPAPDESPIKGEDLNSEQLASVEAEVFEEVGNMDQMPVQHEMPVETTLDKTGAKDARISTGGGNEKERFTLVLAVTADGKKVSPRIIFEGTPFIPPTVSGKGKSTRPRKNPVAWEMHPANRAKHGHPANGMSFGVQEKSWSDQRECNGWISGSWKLRPNNGSIVQQRPRILVLDDFK 458 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig653.8.5 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig653.8.5 >prot_P-littoralis_Contig653.8.5 ID=prot_P-littoralis_Contig653.8.5|Name=mRNA_P-littoralis_Contig653.8.5|organism=Pylaiella littoralis U1_48|type=polypeptide|length=310bp MAWATLMKLREALVKRAGEIYARRHPPAPGESSVDGKDLTSEQLESVAEEback to top mRNA from alignment at P-littoralis_Contig653:53759..55012+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig653.8.5 ID=mRNA_P-littoralis_Contig653.8.5|Name=mRNA_P-littoralis_Contig653.8.5|organism=Pylaiella littoralis U1_48|type=mRNA|length=1254bp|location=Sequence derived from alignment at P-littoralis_Contig653:53759..55012+ (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig653:53759..55012+ >mRNA_P-littoralis_Contig653.8.5 ID=mRNA_P-littoralis_Contig653.8.5|Name=mRNA_P-littoralis_Contig653.8.5|organism=Pylaiella littoralis U1_48|type=CDS|length=930bp|location=Sequence derived from alignment at P-littoralis_Contig653:53759..55012+ (Pylaiella littoralis U1_48)back to top |