mRNA_P-littoralis_Contig653.19.2 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig653.19.2 vs. uniprot
Match: D7FSX1_ECTSI (TPR Domain containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FSX1_ECTSI) HSP 1 Score: 443 bits (1139), Expect = 5.150e-147 Identity = 240/392 (61.22%), Postives = 282/392 (71.94%), Query Frame = 2
Query: 188 MAGEAEQGHVFMLACLAQKAKKYAIARTAWEKYIAARTFDPKAHYNLGVCLDALGERAAALHSFERAFELQPSMADAGANAAGLLIQTGEAERACTFCYLALKGDPECAAALYNLNTALRMAGRHGEAVAFAWRWIRDKLVSGPARRASAALSATIAAIPPSNDHVKSLNTGIDSAPSPXXXXXXXXXXXXXXIAVHTGSRGRTDALDPDVGGVADRGAGSSVSDAACREGEEGGP--LTVACVRWGRKYGPEYVERLAAGVRRHLRRDHLFVCYTDDVEALRWTAGIEARPLGTG-CEEWRGWWHKAFLFSREAGLAGRVLYLDLDTVVVGSLGDVAGYSGTFAALSVEGMVNELRPTGLNSSVMSWDASREAPTVRAVHGLLKEAYAVIT 1354
M G E +FM+ACLAQKAKKYA+ARTAWE+Y+A R FDPKA+YN GVC+D+LGE+ AAL SFE+AFELQPS+ADAGANAAGLLIQT EAERACT CYLAL G+P+CAAALYNLNTALRMAGR EA+A +WRWIR++L +G ASA T+AA SN + P+P + + GS G + +VG S +A +E + G +TV C+RWG KYGPEYVERLAAGVRR+LRRDH FVCYTDDVEAL G+ ARPLG+ C EWRGWWHKAFLFSRE LAGRV+Y+DLDTV+ GSL ++AGY+G FA LS EGM NE RP GLNSSVMSWDA RE TV+ VH LLKEAYAV++
Sbjct: 1 MEGSTEGRQIFMVACLAQKAKKYAMARTAWEQYLAIRPFDPKAYYNHGVCIDSLGEKEAALSSFEKAFELQPSLADAGANAAGLLIQTDEAERACTLCYLALDGNPDCAAALYNLNTALRMAGRPREAIALSWRWIRERLPAGTPSYASAVSLETLAAASSSNS---------EDGPNPHPSAVATTRAE---LPIFCGSMG---GFESEVGKRMVCIEDCSAEGSAAKEQDADGASCVTVVCIRWGPKYGPEYVERLAAGVRRNLRRDHRFVCYTDDVEALSEMPGVVARPLGSARCGEWRGWWHKAFLFSRETTLAGRVVYIDLDTVIAGSLDEIAGYAGPFAVLSAEGMANERRPGGLNSSVMSWDAGREVNTVQPVHDLLKEAYAVVS 377
BLAST of mRNA_P-littoralis_Contig653.19.2 vs. uniprot
Match: A0A6H5J8Y9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J8Y9_9PHAE) HSP 1 Score: 379 bits (973), Expect = 1.060e-123 Identity = 210/355 (59.15%), Postives = 244/355 (68.73%), Query Frame = 2
Query: 296 RTFDPKAHYNLGVCLDALGERAAALHSFERAFELQPSMADAGANAAGLLIQTGEAERACTFCYLALKGDPECAAALYNLNTALRMAGRHGEAVAFAWRWIRDKLVSGPARRASAALSATIAAIPPSNDHVKSLNTGIDSAPSPXXXXXXXXXXXXXXIAVHTGSRGRTDALDPDVGGVADRGAGSSVSDAACREGEEGGP-LTVACVRWGRKYGPEYVERLAAGVRRHLRRDHLFVCYTDDVEALRWTAGIEARPLGTGCE-EWRGWWHKAFLFSREAGLAGRVLYLDLDTVVVGSLGDVAGYSGTFAALSVEGMVNELRPTGLNSSVMSWDASREAPTVRAVHGLLKEAYAVIT 1354
R FDPKA+YN GVC+DALGE+ AAL SFE+AF+LQPS+ADAGANAAGLLIQ+GEAERACT C LAL G+P+CAAALYNLNTALRMAGR EA+A +WRWIR++L +G ASA +AA SN G + PS I G+ D S+ AA +G +G LTV C+RWG KYGPEYVERLAAGVRR+L RDH FVC+TDDVEAL G+ ARPLG+ EWRGWWHKAFLFSRE LAGRV+Y+DLDTV+ SL D+AGY+G FA LS EGM NE RP GLNSSVMSWDA E TV+ V+ LLKEAYAV++
Sbjct: 2 RPFDPKAYYNHGVCIDALGEKEAALSSFEKAFDLQPSLADAGANAAGLLIQSGEAERACTLCLLALDGNPDCAAALYNLNTALRMAGRPREAIALSWRWIRERLPAGTPSYASAVSLENLAAASSSNSE-----DGGNPRPSAVATTRAELPRFGGSIGGFESEVGKRMVCVEDC---------SAEGSAAKEQGADGASRLTVVCIRWGPKYGPEYVERLAAGVRRNLLRDHRFVCFTDDVEALSEMPGVVARPLGSARRGEWRGWWHKAFLFSRETTLAGRVMYIDLDTVIADSLDDIAGYAGPFAVLSAEGMANERRPGGLNSSVMSWDAGSEVNTVQPVYDLLKEAYAVVS 342
BLAST of mRNA_P-littoralis_Contig653.19.2 vs. uniprot
Match: A0A024TX51_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024TX51_9STRA) HSP 1 Score: 194 bits (492), Expect = 4.630e-52 Identity = 107/234 (45.73%), Postives = 136/234 (58.12%), Query Frame = 2
Query: 896 LTVACVRWGRKYGPEYVERLAAGVRRHLRR-DHLFVCYTDDVEALRWTAGIEARPLGTGCEEWRGWWHKAFLFSREAGLAGRVLYLDLDTVVVGSLGDVAGYSGTFAALSVEGMVNELRPTGLNSSVMSWDASREAPTVRAVHGLLKEAYAVITSCVHKLDHWLEMTVPGVTTLQRAFPGQIVEYNSMRAAVAKDSAGSDGNHLLLLPRDARVICFPLEPKPHRVKEEWLQLLW 1594
LTV CV+WG KYG EYV +L GV RHL+ + F C TD+ L I+ R L G W GWW+KA +FS G GR+LYLDLD+V+VGSL D+A YSG F L + M NE R G+NSSVM+W A T+ A L +A + +C++K DHWLEM + G LQ +PGQIVEY +A A+ +P AR++CFPLEPKPH W+ W
Sbjct: 179 LTVVCVKWGVKYGAEYVNKLHRGVARHLKSVRYTFCCLTDNAVGL--APEIDVRLLAPG---WVGWWNKAQVFSPAFGWTGRMLYLDLDSVLVGSLDDLALYSGWFGTLKTDDMENERRIGGINSSVMAWHADTATQTIYA---FLSAHFAAVATCIYKFDHWLEMVLDGYEILQDVYPGQIVEY--AQACQAQ------------VPPHARLVCFPLEPKPHNATAPWVATEW 390
BLAST of mRNA_P-littoralis_Contig653.19.2 vs. uniprot
Match: A0A1V9Z1Y7_9STRA (Uncharacterized protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9Z1Y7_9STRA) HSP 1 Score: 192 bits (489), Expect = 1.090e-51 Identity = 103/235 (43.83%), Postives = 134/235 (57.02%), Query Frame = 2
Query: 896 LTVACVRWGRKYGPEYVERLAAGVRRHLRRDHLFVCYTDDVEALRWTAGIEARPLGTGCEEWRGWWHKAFLFSREAGLAGRVLYLDLDTVVVGSLGDVAGYSGTFAALSVEGMVNELRPTGLNSSVMSWDASREAPTVRAVHGLLKEAYAVITSCVHKLDHWLEMTV--PGVTTLQRAFPGQIVEYNSMRAAVAKDSAGSDGNHLLLLPRDARVICFPLEPKPHRVKEEWLQLLW 1594
L+V CV+WG KYGPEYV RL +GVRRHLRRD F C+T+ L + + PL G + GWW+KA LF+ ++ + GRV+Y+DLDTVVVG L + Y+G F L+ + M NE R G+NSSVM W A T + LL + + + C++K DHWLEM + V LQ +PG IVEY P DARV+CFPLEPKPH W++ W
Sbjct: 174 LSVVCVKWGTKYGPEYVNRLLSGVRRHLRRDFQFHCFTEAPHGL--ASDVLVHPLREG---FTGWWNKAQLFAADSPVHGRVVYIDLDTVVVGDLTALFSYTGNFGTLATDDMHNERRAGGINSSVMIWTAG----TCSDIFELLHQHWKAVAQCIYKFDHWLEMVLCEHPVDFLQELYPGHIVEYMQSCQTTC--------------PADARVVCFPLEPKPHAASAPWIRDYW 385
BLAST of mRNA_P-littoralis_Contig653.19.2 vs. uniprot
Match: A0A662XKL2_9STRA (Uncharacterized protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662XKL2_9STRA) HSP 1 Score: 193 bits (490), Expect = 4.160e-51 Identity = 145/451 (32.15%), Postives = 200/451 (44.35%), Query Frame = 2
Query: 320 YNLGVCLDALGERAAALHSFERAFELQPSMADAGANAAGLLIQTGEA--ERACTFCYLALKGDPECAAALYNLNTALRMAGRHGEAVAFAWRWIRDKL------VSGPARRASAALSATIAAIPPSNDHVKSLNTGIDSAPSPXXXXXXXXXXXXXXIAVHTGSRGRTDALDPDVGGVADRGAGSSVSDAACREGEEGGPLTVACVRWGRKYGPEYVERLAAGVRRH---LRRDHL-FVCYTDDVEALRWTAGIEARPLGTGCEEWRGWWHKAFLFSREAGLA------GRVLYLDLDTVVVGSLGDVAGYS---GTFAALSVEGMVNELRPTGLNSSVMSW-----DASREAPTVRAVHGLLKEAYAVITSCVHKLDHWLEMTVPGVTTLQRAFPGQIVEYNSMRAAVAKDSAGSDGNHLLLLPRDARVICFPLEPKPHRVKEEWLQLLW 1594
+ L L LG R A+ +E + P +A N A + T + E A T C AL P+ AAA +N N LR GR EAV W+ + L PAR +SA L PS + N + A SP + DP+ EG +TV CV+WG KYG +YV +L V RH L + L F+C TDD E ++ A + PL +G W+GWW+K +FS G R LY+DLDTV+VG L D+ ++ G L M NE R G NSS+M+W D + + +H L+ +A ++S ++K DHWLEM +P V L+ AF GQ+VEY ++ H P +ARV+CFPL PKPH + +W+ W
Sbjct: 71 FELAAVLSKLGNRLDAIALYEEVLRVDPECVEALVNLAVQVAITSSSRLEEALTLCMRALVLQPQFAAAHFNRNMLLRRLGRQREAVRSYWQHLTRDLGVDVIRADLPARLSSAIL--------PSEEE----NNQMPMALSPNY---------------------KNPPHDPE------------------NEGSSATGVTVVCVKWGFKYGADYVNKLYNSVMRHGGELTQSRLAFLCMTDDAEGIQLHANLHVLPLASG---WKGWWNKCQVFSNAVGEKLRALGHSRCLYVDLDTVIVGDLTDLLAWAPPPGVLTLLKTNHMTNEQREGGYNSSIMAWCNSCEDGDADERPLGFLHDFLQAHFAAVSSYIYKFDHWLEMALPDVRFLEDAFSGQVVEYRAL------------DEHATTPPVNARVVCFPLLPKPHNAEAQWIAQHW 455
BLAST of mRNA_P-littoralis_Contig653.19.2 vs. uniprot
Match: W4GFR7_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=W4GFR7_9STRA) HSP 1 Score: 189 bits (479), Expect = 3.700e-50 Identity = 100/234 (42.74%), Postives = 134/234 (57.26%), Query Frame = 2
Query: 896 LTVACVRWGRKYGPEYVERLAAGVRRHLRR-DHLFVCYTDDVEALRWTAGIEARPLGTGCEEWRGWWHKAFLFSREAGLAGRVLYLDLDTVVVGSLGDVAGYSGTFAALSVEGMVNELRPTGLNSSVMSWDASREAPTVRAVHGLLKEAYAVITSCVHKLDHWLEMTVPGVTTLQRAFPGQIVEYNSMRAAVAKDSAGSDGNHLLLLPRDARVICFPLEPKPHRVKEEWLQLLW 1594
+TV CV+WG KYG +YV +L GV RHL+ F C TDD + + LG W GWW+KA +FS G GR+LY DLDTV VGSL D+A Y+G F L + M NE R G+NSSVM+W A + A++ L +A++ +C++K DHWLEM + LQ +PGQIVEY A + + +P++AR++CFPLEPKPH W+Q W
Sbjct: 184 ITVVCVKWGVKYGADYVNKLYRGVARHLKSVPFTFCCLTDDPAGIAQEINVRQLELG-----WVGWWNKAQVFSPSFGWRGRMLYFDLDTVFVGSLDDLAMYAGWFGTLETDAMENERRVGGINSSVMTWHADK---ATEAMYMFLHTNFAIVATCIYKFDHWLEMVLQRHDILQVQYPGQIVEY-------AHECQ-------VQVPQNARLVCFPLEPKPHNATAPWVQQEW 395
BLAST of mRNA_P-littoralis_Contig653.19.2 vs. uniprot
Match: A0A1V9Z7B2_9STRA (Uncharacterized protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9Z7B2_9STRA) HSP 1 Score: 180 bits (457), Expect = 2.550e-47 Identity = 97/233 (41.63%), Postives = 133/233 (57.08%), Query Frame = 2
Query: 896 LTVACVRWGRKYGPEYVERLAAGVRRHLRRDHLFVCYTDDVEALRWTAGIEARPLGTGCEEWRGWWHKAFLFSREAGLAGRVLYLDLDTVVVGSLGDVAGYSGTFAALSVEGMVNELRPTGLNSSVMSWDASREAPTVRAVHGLLKEAYAVITSCVHKLDHWLEMTVPGVTTLQRAFPGQIVEYNSMRAAVAKDSAGSDGNHLLLLPRDARVICFPLEPKPHRVKEEWLQLLW 1594
++V C++WG KYGPEYV +L GVRRH ++ F C T+D L I PL EE+ GWW+KA LF+ + L GR++Y+DLDTV+VG L D+ Y+G+F LS + M NE R G+NSSVM W T ++ LL + ++ I+ C++K DH+LEMT+P LQ +P QI+EY + + P AR+I FPLEPKP WL W
Sbjct: 161 ISVVCIKWGTKYGPEYVNKLYCGVRRHFQKTFEFYCLTEDSNGL--VPKIHVLPLK---EEFVGWWNKAQLFAPDFPLLGRIIYIDLDTVLVGDLSDLFTYNGSFGTLSTDDMYNERRRDGINSSVMIWSGI----THSFIYTLLHKYFSSISQCIYKFDHFLEMTLPSHDILQSLYPNQILEYMQ--------------HCQVSCPPTARLITFPLEPKPATATAPWLPSAW 370
BLAST of mRNA_P-littoralis_Contig653.19.2 vs. uniprot
Match: A0A6G0W623_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0W623_9STRA) HSP 1 Score: 180 bits (457), Expect = 3.850e-47 Identity = 104/241 (43.15%), Postives = 137/241 (56.85%), Query Frame = 2
Query: 884 EGGPLTVACVRWGRKYGPEYVERLAAGVRRHLRR-DHLFVCYTDDVEALRWTAGIEARPLGTGCEEWRGWWHKAFLFSREAGLAGRVLYLDLDTVVVGSLGDVAGYSGTFAALSVEGMVNELRPTGLNSSVMSWDASREAPTVRAVHGLLKEAYAVITSCVHKLDHWLEMTVPG-VTTLQ--RAFPGQIVEYNSMRAAVAKDSAGSDGNHLLLLPRDARVICFPLEPKPHRVKEEWLQLLW 1594
E GPL+V CV+WG+KY EYV +L GV ++L F C TD+ L I+ R L G + GWW+KA LF+ G++LYLDLD+V+ GSL D A YSG+FA L +GM NE R G+NSS+M W++S A + ++ LK Y + SC++K DHWLEM +P TLQ GQIVEY AA + P +AR++CFPLEPKPH W+ W
Sbjct: 166 EPGPLSVVCVKWGKKYDSEYVNKLFRGVSKYLCAVPFTFYCLTDNPNGLE--PDIQTRQLMPG---FSGWWNKAHLFAPHHRWHGQILYLDLDSVITGSLDDFAKYSGSFAILKTDGMQNERRSQGVNSSIMMWNSSA-AEDLEVIYTFLKANYKAVNSCIYKFDHWLEMLLPSDYHTLQDMELLQGQIVEY----AASCQVEC----------PSNARIVCFPLEPKPHNAPAPWVAEHW 386
BLAST of mRNA_P-littoralis_Contig653.19.2 vs. uniprot
Match: G4YEH6_PHYSP (Uncharacterized protein n=1 Tax=Phytophthora sojae (strain P6497) TaxID=1094619 RepID=G4YEH6_PHYSP) HSP 1 Score: 182 bits (461), Expect = 4.320e-47 Identity = 139/430 (32.33%), Postives = 192/430 (44.65%), Query Frame = 2
Query: 350 GERAAALHSFERAFELQPSMADAGANAAGLLI--QTGEAERACTFCYLALKGDPECAAALYNLNTALRMAGRHGEAVAFAWRWIRDKLVSGPARRASAALSATIAAIPPSNDHVKSLNTGIDSAPSPXXXXXXXXXXXXXXIAVHTGSRGRTDALDPDVGGVADRGAGSSVSDAACREGEEGGPLTVACVRWGRKYGPEYVERLAAGVRRHLRRDHL-FVCYTDDVEALRWTAGIEARPLGTGCEEWRGWWHKAFLFS-------REAGLAGRVLYLDLDTVVVGSLGDVAGYS---GTFAALSVEGMVNELRPTGLNSSVMSW--DASREAPTVRAVHGLLKEAYAVITSCVHKLDHWLEMTVPGVTTLQRAFPGQIVEYNSMRAAVAKDSAGSDGNHLLLLPRDARVICFPLEPKPHRVKEEWLQLLW 1594
G R A+ +E + P +A N A L E A C AL P+ A A YN N LR G EA+A W ++ L + R A A+ P +D +G R AD+ + D C + G +TV CV+WG KYGP+YV +L V RH + FVC TD+ + + + PLG G W+GWW+K LFS RE G + R L++DLDTV+VGSL D+ ++ G A L + M NE R G NSS+M+W D+ E +++ V+ L + +T ++K DHWLEM +P + L+ FP QIVEY S+ DSA + P A ++CFPL PKPH+ WL W
Sbjct: 81 GRRQDAIGLYEEILQTDPGCVEAQVNLAAQLAIADATRLEDALQLCEQALALRPDFAEAHYNRNMLLRRLGHQQEAIALYWGYLVRDLGANAIRETMPDELAR--AVLPFDDR--------------------------------SGDR------------RADKPSVVPSEDTTCNQENNGDGVTVVCVKWGVKYGPQYVNKLYNSVARHCGGLQMTFVCLTDNSDGIDLHGNLHILPLGGG---WKGWWNKCQLFSSDMSAKLRELGHS-RCLFMDLDTVIVGSLVDLLAWTPPVGVLALLKTDEMANEQRAGGFNSSIMAWRNDSDDEVGSLQFVYSFLHSHFTAVTKYIYKFDHWLEMALPEASFLEEKFPDQIVEYRSL-----DDSAVTP-------PPGAIIVCFPLLPKPHQATAMWLAHHW 448
BLAST of mRNA_P-littoralis_Contig653.19.2 vs. uniprot
Match: A0A485LT11_9STRA (Aste57867_25131 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LT11_9STRA) HSP 1 Score: 180 bits (457), Expect = 4.770e-47 Identity = 99/235 (42.13%), Postives = 135/235 (57.45%), Query Frame = 2
Query: 896 LTVACVRWGRKYGPEYVERLAAGVRRHLRR-DHLFVCYTDDVEALRWTAGIEARPLGTGCEEWRGWWHKAFLFSREAGLAGRVLYLDLDTVVVGSLGDVAGYSGTFAALSVEGMVNELRPTGLNSSVMSWDASREAPTVRAVHGLLKEAYAVITSCVHKLDHWLEMTVP-GVTTLQRAFPGQIVEYNSMRAAVAKDSAGSDGNHLLLLPRDARVICFPLEPKPHRVKEEWLQLLW 1594
+TV CV+WG KYGP+YV +L GV ++L D FVC TD+ + L IE R L +G W GWW+KA LFS GR+LY+DLDTV+ GSL D+A Y G F L + M NE R G+NSSVM W+A P++ ++ L+ + +++ ++K DHWLEM + LQ FP QIVE+ V +D +P A+++CFPLEPKPH W+ W
Sbjct: 182 VTVVCVKWGSKYGPDYVNKLYRGVAKYLSTVDFTFVCLTDNPDGL--LPEIETRALESG---WSGWWNKAQLFSPHFQWHGRMLYIDLDTVITGSLVDLALYDGAFGTLKTDEMQNERRVGGINSSVMCWNAGH--PSIEIIYMFLQRHFDIVSKVIYKFDHWLEMVLTHDYDVLQDLFPLQIVEFMQ----VCQDD----------IPPQAKLVCFPLEPKPHMATAPWVAHYW 395 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig653.19.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig653.19.2 >prot_P-littoralis_Contig653.19.2 ID=prot_P-littoralis_Contig653.19.2|Name=mRNA_P-littoralis_Contig653.19.2|organism=Pylaiella littoralis U1_48|type=polypeptide|length=493bp MAGEAEQGHVFMLACLAQKAKKYAIARTAWEKYIAARTFDPKAHYNLGVCback to top mRNA from alignment at P-littoralis_Contig653:91828..102845- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig653.19.2 ID=mRNA_P-littoralis_Contig653.19.2|Name=mRNA_P-littoralis_Contig653.19.2|organism=Pylaiella littoralis U1_48|type=mRNA|length=11018bp|location=Sequence derived from alignment at P-littoralis_Contig653:91828..102845- (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig653:91828..102845- >mRNA_P-littoralis_Contig653.19.2 ID=mRNA_P-littoralis_Contig653.19.2|Name=mRNA_P-littoralis_Contig653.19.2|organism=Pylaiella littoralis U1_48|type=CDS|length=1479bp|location=Sequence derived from alignment at P-littoralis_Contig653:91828..102845- (Pylaiella littoralis U1_48)back to top |