mRNA_P-littoralis_Contig653.13.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig653.13.1 vs. uniprot
Match: A0A6H5KFP1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KFP1_9PHAE) HSP 1 Score: 247 bits (630), Expect = 2.760e-69 Identity = 126/200 (63.00%), Postives = 150/200 (75.00%), Query Frame = 3
Query: 432 GVFGAHPEDLKRGKNKKDGYITGADSPHLDRLLEILEFFGVWQIPLQASFEQREWQKHFITDQSWFDMRAIILGFVSMARYIFADKDLVEEADGKATRCLYPRMFSQDILEMRFAHIRAGMGCHKAPTASQTAQAGMHGDTCRLSHGERRRNSSRSGRQPFDIQQGATLRVALPVNAEERGEVVRAATWRNADYVFETRS 1031
GVF +D + KK+GYITGAD P L RLLE+L+FF WQ L+ +F + W HFITD SW DMR+ ILGFV+M+RYIFAD+DLVEE G R LYPRMFSQDILE RFAHIR GMG HKAPTA+Q A+ HGDTCR+SHG +RRN+SRS F++Q A++RVALPVNA ER EVVRAATW D+VFE+R+
Sbjct: 694 GVFNVLEQDRAHPQRKKEGYITGADCPPLTRLLEVLQFFDSWQSNLRHTFGGK-WAPHFITDVSWKDMRSCILGFVAMSRYIFADRDLVEEEGGVPRRFLYPRMFSQDILEHRFAHIRTGMGTHKAPTATQAARQAKHGDTCRVSHGLQRRNASRSTGS-FEVQSSASIRVALPVNASEREEVVRAATWDRDDHVFESRA 891
BLAST of mRNA_P-littoralis_Contig653.13.1 vs. uniprot
Match: A0A6H5K7Z3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K7Z3_9PHAE) HSP 1 Score: 229 bits (585), Expect = 2.680e-64 Identity = 117/200 (58.50%), Postives = 138/200 (69.00%), Query Frame = 3
Query: 432 GVFGAHPEDLKRGKNKKDGYITGADSPHLDRLLEILEFFGVWQIPLQASFEQREWQKHFITDQSWFDMRAIILGFVSMARYIFADKDLVEEADGKATRCLYPRMFSQDILEMRFAHIRAGMGCHKAPTASQTAQAGMHGDTCRLSHGERRRNSSRSGRQPFDIQQGATLRVALPVNAEERGEVVRAATWRNADYVFETRS 1031
GV+G + + K+G NK+ GYITGADSP L RLLEILEFF WQ+ L+A F +EW HFITD SW DMR ILGFV+M RY+F D+DLV R LYPRMFSQDILE RFAHIR+G G HK PTA Q +A GDT R+ HG RRRNSSRS F ++ +R A P NA ER +VVRA T +A +VFE+RS
Sbjct: 474 GVYGLNEVERKQGGNKRKGYITGADSPLLGRLLEILEFFDSWQVSLEAHFGPKEWANHFITDYSWTDMRTTILGFVAMCRYVFKDEDLVSGG-----RFLYPRMFSQDILEHRFAHIRSGRGTHKNPTAMQAIEAARAGDTARMFHGTRRRNSSRSAGMAFQLEDSQGVRAAFPANASERAQVVRAETRDDAHHVFESRS 668
BLAST of mRNA_P-littoralis_Contig653.13.1 vs. uniprot
Match: A0A6H5KRI1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KRI1_9PHAE) HSP 1 Score: 189 bits (479), Expect = 9.720e-54 Identity = 102/152 (67.11%), Postives = 106/152 (69.74%), Query Frame = 1
Query: 1 NYPRGFQPGREGSDGAKLPVYMFLQQGVLEEGVQEHSTAGVHARVARWWSSKADSNEDRAFTGNRTSTGKILTAVVK--------DEDLAC*NGLKKSFFGRSTTWVLSRSSLARERADAQWSFCLPAGWAEEYGADGSWKFKTSKGGTPVS 432
NYP GF+PGREGSDGAKLPVYMFLQQG LEEGVQEH+TA VHA VARWWSS ADSNEDRAFTGNRTSTGKIL +VVK DEDLA GLKKSF +GWAEEY ADGSWKFKTSKGGTPVS
Sbjct: 85 NYPCGFKPGREGSDGAKLPVYMFLQQGALEEGVQEHTTAEVHAHVARWWSSYADSNEDRAFTGNRTSTGKILASVVKADLYIPRQDEDLAFYYGLKKSF----------------------------SGWAEEYSADGSWKFKTSKGGTPVS 208
BLAST of mRNA_P-littoralis_Contig653.13.1 vs. uniprot
Match: A0A6H5K5I6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K5I6_9PHAE) HSP 1 Score: 145 bits (367), Expect = 1.350e-36 Identity = 96/245 (39.18%), Postives = 127/245 (51.84%), Query Frame = 3
Query: 294 GAVEVVIGTRAS*CAVEFLSTGRMGGGVRC*RLMEVQD*QGWNARLGVFGAHPEDLKRGKNKKDGYITGADSPHLDRLLEILEFFGVWQIPLQASF------EQREWQKHFITDQSWFDMRAIILGFVSMARYIFADKDL--VEEADGKATRCLYPRMFSQDILEMRFAHIRAGMGCHKAPTASQTAQAGMHGDTCRLSHGERRRNSSRS--GRQPFDIQQGATLR---VALPVNAEERGEVVRA 989
G V+VV G A + GR G C + + Q + G +G D K G K G I +S +DRLLEILEFF WQ L+ ++ W+KHFIT QSWFD+R ILGFVSM RY+F D + ++ R L PR SQDI E RF+HIRA +G H+ PTA + + GD CR ++G+RRRN+SR+ R D ++ + L V E G+ VRA
Sbjct: 20 GVVQVVSGMIIDAIADYMEANGR-NGAAECYQTLARQMNDFVDIFNGNYGRSKVDRKDGSKKMVGCIRSFESAPMDRLLEILEFFDDWQSTLERKHIPSGEGDKLGWKKHFITHQSWFDLRLSILGFVSMCRYLFEDPERFQIDSLSPNCRRFLSPRNCSQDICEHRFSHIRAALGTHRNPTAREAKKRSAVGDLCRATNGKRRRNASRNPNARSGGDFEEHGDSEKKAIILAVTKVETGKEVRA 263
BLAST of mRNA_P-littoralis_Contig653.13.1 vs. uniprot
Match: A0A6H5K071_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K071_9PHAE) HSP 1 Score: 119 bits (297), Expect = 7.460e-25 Identity = 78/204 (38.24%), Postives = 102/204 (50.00%), Query Frame = 3
Query: 435 VFGAHPEDLKRGKNKKDGYITGADSPHLDRLLEILEFFGVWQIPLQA-SFEQREWQKHFITDQSWFDMRAIILGFVSMARYIFADKDLVEEADGKATRCLYPRMFSQ--DILEMRFAHIRAGMGCHKAPTASQTAQAGMHGDTCRLSHGERRRNSSRSGRQPFDIQQ-GATLRVALPVNAEERGEVVRAATWRNADYVFETRSV 1034
+ P D+ + + + IT DSP LDRLLEILE+F W L F+ DQ+W D+R ILGFV+M RY+F D D V E G R + R ++Q D E RF HIRA GCHK P AG D R + +RR+S R G+ F + A LPVN ++R +RA A +V E RS+
Sbjct: 492 AYNRDPIDVSKRIDIRKSCITSKDSPLLDRLLEILEWFDTWWQDLNLFGGSDLALDDLFLPDQTWDDLRLTILGFVAMTRYVFGDDDWVTE--GSRGRYKFMRDWNQASDTCEKRFGHIRANQGCHKNPRKESAFAAGHRADVVRKAQMSKRRDSDR-GKDAFKLDMVSAAAEATLPVNEQQRRYPMRAEGAGRAGFVREARSL 692
BLAST of mRNA_P-littoralis_Contig653.13.1 vs. uniprot
Match: A0A6H5K1G6_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K1G6_9PHAE) HSP 1 Score: 79.7 bits (195), Expect = 2.360e-14 Identity = 35/38 (92.11%), Postives = 37/38 (97.37%), Query Frame = 1
Query: 1 NYPRGFQPGREGSDGAKLPVYMFLQQGVLEEGVQEHST 114
NYPRGF+PGREGSDGAKLPVYMFLQQG LEEGVQEH+T
Sbjct: 85 NYPRGFKPGREGSDGAKLPVYMFLQQGALEEGVQEHTT 122
BLAST of mRNA_P-littoralis_Contig653.13.1 vs. uniprot
Match: A0A6H5K994_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K994_9PHAE) HSP 1 Score: 70.1 bits (170), Expect = 9.090e-10 Identity = 40/69 (57.97%), Postives = 46/69 (66.67%), Query Frame = 1
Query: 229 KDEDLAC*NGLKKSFFGRSTTWVLSRSSLARERADAQWSFC--LPAGWAEEYGADGSWKFKTSKGGTPV 429
+DEDLA GL+K + T WVLSRSSL ERA+A SF LPAGW EE+G D SW FK + GTPV
Sbjct: 63 RDEDLAQYYGLRK-VSSKPTKWVLSRSSLGEERAEAHISFGFGLPAGWCEEFGPDHSWTFKKTHDGTPV 130
BLAST of mRNA_P-littoralis_Contig653.13.1 vs. uniprot
Match: D7FZI2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZI2_ECTSI) HSP 1 Score: 62.4 bits (150), Expect = 1.470e-6 Identity = 55/207 (26.57%), Postives = 80/207 (38.65%), Query Frame = 3
Query: 432 GVFGAHPEDLKRGKNKKDGYITGADSPHLDRLLEILEFFGVW-----QIPLQASFEQREWQKHFITDQSWFDMRAIILGFVSMARYIFADKDLVEEADGKATRCLYPRMFSQDILEMRFAHIRAGMGCHKAPTASQTAQAGMHGDTCRLSHGERRRNSSRSGRQPFDIQQGATL-RVALPVNAEERGEVVRAATWRNADYVFETRSV 1034
G +G + + NK GY+T A+ P L+RL+EIL +F W + P W+KHFIT S R ++ AHIRAG+G + PTA+Q + + GD R HG R N +R+ R D R+ L V E VR+ + + + V R +
Sbjct: 843 GDYGRTKFERRAKINKMKGYVTSAEDPILERLMEILRYFDDWNDMLQEFPPPTGGGDVGWKKHFITRHS----RTLVC-----------------------------------------AHIRAGLGTLRNPTAAQAKERSVRGDLNRGLHGGSRANFNRNARSGDDFNVSDYRGRIMLAVTQAVAAENVRSRSRNSPNAVLCPRYI 1004
BLAST of mRNA_P-littoralis_Contig653.13.1 vs. uniprot
Match: A0A6H5K6I9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K6I9_9PHAE) HSP 1 Score: 61.2 bits (147), Expect = 1.620e-6 Identity = 59/211 (27.96%), Postives = 76/211 (36.02%), Query Frame = 3
Query: 426 RLGVFGAHPEDLKRGK-------NKKDGYITGADSPHLDRLLEILEFFGVWQIPLQASFEQREWQKHFITDQSWFDMRAIILGFVSMARYIFADKDLVEEADGKATRCLYPRMFSQDILEMRFAHIRAGMGCHKAPTASQTAQAGMHGDTCRLSHGERRRNSSRSGRQPFD-IQQGATLRVALPVNAEERGEVVRAATWRNADYVFETRSV 1034
R F H D R K NK GY+T AD P L+RL+EIL +F W DM IIL E RF +RAG+G + PTA+Q + + GD R HG R N +R+ R D I R+ L V E E VRA + + + V R +
Sbjct: 182 RSDHFAVHTGDYGRTKFERRAQINKMKGYVTSADDPILERLVEILRYFDDWN-----------------------DMMQIIL-------------------------------------EHRFKDVRAGLGTLRNPTAAQAKERSVRGDLNRGLHGGSRANFNRNARSGNDFIDSDYRSRIMLAVTQAEAAENVRARSRNSPNAVLCPRYI 332 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig653.13.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 9
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig653.13.1 >prot_P-littoralis_Contig653.13.1 ID=prot_P-littoralis_Contig653.13.1|Name=mRNA_P-littoralis_Contig653.13.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=135bp MRAIILGFVSMARYIFADKDLVEEADGKATRCLYPRMFSQDILEMRFAHIback to top mRNA from alignment at P-littoralis_Contig653:62440..64544+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig653.13.1 ID=mRNA_P-littoralis_Contig653.13.1|Name=mRNA_P-littoralis_Contig653.13.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=2105bp|location=Sequence derived from alignment at P-littoralis_Contig653:62440..64544+ (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig653:62440..64544+ >mRNA_P-littoralis_Contig653.13.1 ID=mRNA_P-littoralis_Contig653.13.1|Name=mRNA_P-littoralis_Contig653.13.1|organism=Pylaiella littoralis U1_48|type=CDS|length=405bp|location=Sequence derived from alignment at P-littoralis_Contig653:62440..64544+ (Pylaiella littoralis U1_48)back to top |