mRNA_P-littoralis_Contig652.26.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig652.26.1 vs. uniprot
Match: A0A6H5KDQ1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KDQ1_9PHAE) HSP 1 Score: 335 bits (858), Expect = 1.970e-111 Identity = 175/274 (63.87%), Postives = 206/274 (75.18%), Query Frame = 1
Query: 259 MYHSLGAGEVLPVISTSGGRG-GFKTIPRLMEHLSKERWRTWMYPVGAHELESKFEQAFGQAAMNVACTYLFQQEMYHETMEMLSRSLPLWQKLVVQTLGAGVVSTTNERLRLTETLSANVKIIERTFGLVESILSDGRLYLCGDSISAADIAFASMAFPVILPEETDSVFVAYDPRSLPRGYVEVIKSMRSRGGGIFILRLYNQKRIRKGGVATRTLARSPRRGRSFTLRKNVNSPSQTITSQQGGRRATLVQVTPTAPLIPLSPGRHRASIA 1077
MYHSLGA + LPVIST+ GRG KT+P LMEHLS RWR WMYP GAHELE + EQAFGQA M V YLFQ+ M +T++M SR LPLWQ+L++ TLG G+V+T N RLRL + +N+KIIE+TFGLVE +LSDGR YLCGDSISAADI FA++AFPV+LPEET VFV YDPR LPRGYVEVIKS+R R GG F LRLY KR RKG T RS RRGRSFTL+KNVNSP ++S++G RRAT+ +PL+P +HRAS A
Sbjct: 1 MYHSLGADDSLPVISTNEGRGESLKTVPALMEHLSTARWRAWMYPEGAHELEKELEQAFGQAVMRVVYAYLFQEGMRSKTIKMFSRGLPLWQRLLMPTLGVGLVNTMNNRLRLEGGIRSNMKIIEKTFGLVERLLSDGRAYLCGDSISAADITFAALAFPVLLPEETADVFVEYDPRLLPRGYVEVIKSLRFREGGAFALRLYRNKRTRKGSPVTPL--RSSRRGRSFTLKKNVNSPLHNLSSRRGDRRATVTHPRHVELQMPLTPPKHRASFA 272
BLAST of mRNA_P-littoralis_Contig652.26.1 vs. uniprot
Match: D8LQN8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQN8_ECTSI) HSP 1 Score: 162 bits (410), Expect = 1.560e-45 Identity = 97/230 (42.17%), Postives = 119/230 (51.74%), Query Frame = 1
Query: 145 IFVLRHSNYSERLRWVLELSGEEFHEVPVAIFFERSTAMYHSLGAGEVLPVISTSGGRGGFKTIPRLMEHLSKERWRTWMYPVGAHELESKFEQAFGQAAMNVACTYLFQQEMYHETMEMLSRSLPLWQKLVVQTLGAGVVSTTNERLRLTETLSANVKIIERTFGLVESILSDGRLYLCGDSISAADIAFASMAFPVILPEETDSVFVAYDPRSLPRGYVEVIKSMRSR 834
+F LR++NY+E+LRW LELSGE FHE EM ET++M SR LPLWQ+L++ TLG G+V+ NERLRL + +N+K IE+TFG+VE +LSDGR YLCGDSISAADI FA++AFPV+LPEET VFV YDPR LPRGYVEVIK +R
Sbjct: 1 MFTLRYNNYTEKLRWALELSGEVFHE-------------------------------------------------------------------------------------EMRSETIKMFSRGLPLWQRLLMPTLGVGLVNMMNERLRLEGGIRSNMKTIEKTFGMVERLLSDGRAYLCGDSISAADITFAALAFPVLLPEETADVFVEYDPRLLPRGYVEVIKRCGAR 145
BLAST of mRNA_P-littoralis_Contig652.26.1 vs. uniprot
Match: A0A836CPN8_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CPN8_9STRA) HSP 1 Score: 116 bits (291), Expect = 1.270e-25 Identity = 84/278 (30.22%), Postives = 128/278 (46.04%), Query Frame = 1
Query: 58 LWNYIPSSLRPWACRFLGTRYSPGSQANRIFVLRHSNYSERLRWVLELSGEEFHEVPVAIFFERSTAMYH-SLGAGEVLPVI--STSGGRGGFKTIPRLMEHLSKERWRTWMYPVG-AHELESKFEQAFGQAAMNVACTYLFQQEMYHETMEMLSRSLPLWQKLVVQTLGAGVVSTTNER-LRLTETLSANVKIIERTFGLVESILSDGRLYLCGDSISAADIAFASMAFPVILPEETDSVFVAYDPRSLPRGYVEVIKSMRSRGGGIFILRLYNQKR 876
L +++P L YSP + L +S+Y E+ RWVL+L E + E+ V R TA + S A LP++ + G R + L + R + W+YP+ A LE+ F FG A A Y+ +++ L+ L + R +RL L +N++ ++ F LVE L +G YLCG +SAADIAFAS+A+P++LP E F+A + LP Y ++ R+ G F LR+Y R
Sbjct: 136 LQSHLPRPLCNLFSHITNGPYSPARNDAVLLSLAYSHYCEKARWVLDLCQESYEEICVPACSVRLTAKLNGSKAAFGTLPLVVATVDGERAMLPDSGDVTAMLCESRQQAWLYPMADARALETYFSDQFGLPAFRAAYFYMLSPATCEP--RVMAAITARGYLLIAHALSRAPRAAAAARFMRLEAQLPSNLEAVDAAFALVERRLREGGPYLCGAELSAADIAFASLAYPMVLPPEQAHRFIARESPDLPEAYARIVDRYRATPAGQFALRVYAHNR 411
BLAST of mRNA_P-littoralis_Contig652.26.1 vs. uniprot
Match: A0A1S3H5Y1_LINUN (uncharacterized protein LOC106151430 isoform X1 n=2 Tax=Lingula unguis TaxID=7574 RepID=A0A1S3H5Y1_LINUN) HSP 1 Score: 111 bits (278), Expect = 2.510e-24 Identity = 79/304 (25.99%), Postives = 148/304 (48.68%), Query Frame = 1
Query: 7 VALIDEAAVAITKARLWLWNYIPSSLRPWACRFLGTRYSPGSQANRIFV-LRHSNYSERLRWVLELSGEEFHEVPVAIFFERSTAMYHSLGAGEVLPVISTSGGRGGFKTIP---RLMEHLSKERW-RTWMYPV-GAHELESKF--EQAFGQAAMNVACTYLF---QQEMYHETMEMLSRSLPLWQKLVVQTLGAGVVSTTNERLRLTE--TLSANVKIIERTFGLVESILSDGRLYLCGD-SISAADIAFASMAFPVILPEETDSVFVAYDPRSLPRGYVEVIKSMRSRGGGIFILRLYNQKR 876
+AL+ I +L W S+L + R+ + S G+ + + + S + E +RW +++GE + E V F +++ +LG+ +P++ T T R + L+ ER+ W++P A E E + ++GQA M Y F + + + +++ + + WQ +++ L G L++ + T AN++ +++T+ V +LSDGR Y+ G S ADIAFA++++P+ILP E D ++ LP Y + ++ R G F+LRL+ ++R
Sbjct: 28 IALMVWQLYIIVYTKLSTWFPRTSALISSSVRWAHSLISGGNTKTHVLITMPFSPFCETVRWAFDMAGEPYDERSVGPIFHYFVSLFQTLGSNRAVPIMITHPDHRVLPTSHACLRFLGDLNNERFGEDWVFPSRDAEEFEMNLSADDSYGQAVMRCVYHYFFTAKEDDGKKQLLQVCKKGISKWQSVLLPFLWPGYELIIKLSLKVDDQVTFKANIEQVDKTWDKVNQLLSDGRKYILGTRQASGADIAFAALSYPLILPTEMDGGLFSFSKDPLPPRYRKEVERRRKSAAGRFVLRLFKEER 331
BLAST of mRNA_P-littoralis_Contig652.26.1 vs. uniprot
Match: A0A1S3K7N9_LINUN (uncharacterized protein LOC106179276 isoform X1 n=1 Tax=Lingula unguis TaxID=7574 RepID=A0A1S3K7N9_LINUN) HSP 1 Score: 109 bits (273), Expect = 9.280e-24 Identity = 79/271 (29.15%), Postives = 134/271 (49.45%), Query Frame = 1
Query: 112 TRYSPGSQANRIFVLRHSNYSERLRWVLELSGEEFHEVPVAIFFERSTAMYHSLGAGEVLPVISTSGGRGGFKTIPR-------LMEHLSKERWRTWMYPVG-AHELESKFEQAFG--QAAMNVACTYLFQQEM-YHETMEMLSRSLPLWQKLVVQTLGAGV--VSTTNERLRLTETLSANVKIIERTFGLVESILSDGRLYLCGD-SISAADIAFASMAFPVILPEETDSVFVAYDPRSLPRGYVEVIKSMRSRGGGIFILRLYNQKRIR 882
T Y+ + + L +S++ E++ W +LSG E F T ++H+ G PV+ TS +P+ L E K+ + W++P A E++++F +AFG AA + YL+ + H E+ + +P WQ V L V + T ++ + N I+ + VE +L+DGR +C IS ADIAFA++++P++LP E + F+A++ ++P Y + +K R+ G FILRLY + R R
Sbjct: 51 TMYAGDRSKHILITLPYSHFCEKVNWACQLSGVPVEEKGYIPIFHNIT-LWHT-GKNSSTPVMITSQNT----VLPQSTDIMRFLKERNLKKFEKDWIFPCEEAVEMDARFSEAFGYGHAAFCIVYCYLYGDSLGKHRLREVFQKGVPKWQAACVGLLWPSVEFIFTRFVNIKSADFFRKNQTIVNEVWDKVERLLADGRKNICDTPEISGADIAFAALSYPLVLPPEMNEKFMAFEKGTIPAQYYDEVKRRRNTAAGKFILRLYREHRHR 315
BLAST of mRNA_P-littoralis_Contig652.26.1 vs. uniprot
Match: I4B578_TURPD (Glutathione S-transferase domain-containing protein n=1 Tax=Turneriella parva (strain ATCC BAA-1111 / DSM 21527 / NCTC 11395 / H) TaxID=869212 RepID=I4B578_TURPD) HSP 1 Score: 99.0 bits (245), Expect = 2.010e-20 Identity = 78/259 (30.12%), Postives = 125/259 (48.26%), Query Frame = 1
Query: 142 RIFVLRHSNYSERLRWVLELSGEEFHEVPVAIFFERSTAMYHSLGAGEVLPVISTSGGRGGFKTIP---RLMEHLSKERWRTWMYPVGAHE----LESKFEQAFGQAAMNVACTYLFQQEMYHETMEMLSRSL-PLWQK----LVVQTLGAGVVSTTNERLRLTETLSANVKIIERTFGLVESILSDGRLYLCGDSISAADIAFASMAFPVILPEETDSVFVAYDPRSLPRGYV--EVIKSMRSRGGGIFILRLYNQKR 876
R+ + S+Y E+++W L+L+G F E + ++H+ G PV+ G + IP +++HL+ +TW+Y AH LE +F+ + G +LF E+ E+ S+ + P WQK L L AG+++ E + + + E F V+ +L DGR +LCG+ ISAADI FA++A PVILP E + D S+ G VI+ R+ G ++ RLY + R
Sbjct: 2 RLISISISHYVEKVKWALQLAGLPFTEESYIPGLHAAVTLWHTGGRHRATPVLIDDG-----EVIPDSTAILQHLAARYRQTWLY---AHPEALVLEERFDASIGPHTRRFIYRHLFDNEL--SLAEIFSQDVVPAWQKRMLPLAAPMLKAGMIA---EMAIYHDEAERSRLVFEAEFAYVDKLLQDGRPFLCGEKISAADITFAALAAPVILPSEYGARLP--DLNSVKPGSTLPAVIEGYRNTTAGKYVQRLYRENR 245
BLAST of mRNA_P-littoralis_Contig652.26.1 vs. uniprot
Match: A0A838IGB1_9DELT (Glutathione S-transferase family protein n=1 Tax=Bradymonadaceae bacterium TaxID=2740543 RepID=A0A838IGB1_9DELT) HSP 1 Score: 92.8 bits (229), Expect = 4.310e-18 Identity = 74/255 (29.02%), Postives = 119/255 (46.67%), Query Frame = 1
Query: 139 NRIFVLRHSNYSERLRWVLELSGEEFHEVPVAIFFERSTAMYHSLGAGEVLPVISTSGGRGGFKTIPRLMEHLSKERWRTW--MYPVG------AHELESKFEQAFGQAAMNVACTYLFQQEMYHETMEMLSRSLPLWQKLVVQTLGAGVVSTTNERLRLTE-TLSANVKIIERTFGLVESILSDGRLYLCGDSISAADIAFASMAFPVILPEETDSVFVAYDPRSLPRGYVEVIKSMRSRGGGIFILRLYNQKR 876
N + + S++ E+ RW L+ G ++ E A F + G G +PV+ T+ G F +++HL ++P ELE F++ G A + + L + + + ML + P WQ+ +V + S R+ + + + + IE F LVE ++DGR YL GDS+SAADI FAS+A ++ P + A D P G V +++ MR+R G FIL LY + R
Sbjct: 4 NILVTISFSHFCEKARWALDHHGVDYREDDHAPIFHMLGT--YPRGGGRTVPVLVTAAGV--FSDSTDILKHLDAVATDASKRLFPADESQRLEVEELEELFDKTLGPATRRLLYSRLLGEGAFMK--RMLKLNGPAWQRALVGPSFPLIRSAIRRAYRINDQSAQRSRERIEEVFALVEERIADGRRYLVGDSLSAADITFASLAGELVFPAQFGFTLPALD--EAPAGVVALVEEMRARPAGRFILDLYARDR 250
BLAST of mRNA_P-littoralis_Contig652.26.1 vs. uniprot
Match: A0A4R7P505_9GAMM (Glutathione S-transferase n=1 Tax=Panacagrimonas perspica TaxID=381431 RepID=A0A4R7P505_9GAMM) HSP 1 Score: 84.0 bits (206), Expect = 5.750e-15 Identity = 73/254 (28.74%), Postives = 112/254 (44.09%), Query Frame = 1
Query: 142 RIFVLRHSNYSERLRWVLELSGEEFHEVPVAIFFERSTAMYHSLGAGEVLPVISTSGGRGGFKTIPRLMEHLSKERWRTWMYPVGAH----ELESKFEQAFGQAAMNVACTYLFQQEMYHETMEMLSRSLPLWQKLVVQTLGAGVVSTTNERLRLT-ETLSANVKIIERTFGLVESILSDGRLYLCGDSISAADIAFASMAFPVILPEETDSVFVAYDPRSLPRGYVEVIKSMRSRGGGIFILRLYNQKRIRKG 888
R+ + S+Y E+ RW L +G E+ E P F H+ G + V T + L H ER R +YP ELE +F+ G + + E + + + ++ P W++L+ L + RLR T + + A + II F V ++L+DGR YL G +AAD+ FA MA PV+LP E + + + +EV + R G F+LRLY Q+R G
Sbjct: 2 RLITIPMSHYCEKARWGLAHAGLEYLEQPHLQVFHYLAVRRHARGGKVPVLVADTEVIEDSTAILQFLDHHYVPERRR--LYPDAQRNEIEELEERFDTMLGVETRRWVY-FRWIDEPTRDVLRVAAQGTPWWERLLAPLLFPLMRRFLAMRLRATRQNVEAGLLIISTIFDEVGALLADGRPYLMGAEFTAADLTFACMAAPVLLPPEYGVLLPTLEEAPI-EARIEV-ERFRLHPAGQFVLRLYQQRRAEMG 250
BLAST of mRNA_P-littoralis_Contig652.26.1 vs. uniprot
Match: A0A7S1A517_NOCSC (Hypothetical protein n=1 Tax=Noctiluca scintillans TaxID=2966 RepID=A0A7S1A517_NOCSC) HSP 1 Score: 84.3 bits (207), Expect = 8.400e-15 Identity = 73/278 (26.26%), Postives = 128/278 (46.04%), Query Frame = 1
Query: 70 IPSSLRPWACRFLGTRYSPGSQANRIFVLRHSNYSERLRWVLELSGEEFHEVPVAIFFERSTAMYHSLGAGEVLPVISTSGGRGGFKTIPRLMEHLSKERWRTWMYPV-GAHELESKFEQAFGQAAMNVACTYLFQQEMYHETMEMLSRSLPLW-------QKLVVQTLGAGVVSTTNERLRLTETLSANVKIIERTFGLVESILSDGRLYLCGD-SISAADIAFASMAFPVILPEETDSVFVAYDPRSLPRGYVEVIKSMRSRGGGIFILRLYNQKR 876
IP ++R + +Y + L +S + E++ W + + V +T M S + +PV+ G K +++ L E +W+YP E+E + AFG++ + +LF + E +L R +W ++L+ L + L L + L V ++ F V +L DGR Y+CG ++AADI FA++A+P++LP+E +VFV++ LP G+ ++S R G F+LRLY ++R
Sbjct: 32 IPDAIRAKLRSYFPLKYP--RHRRTVVALPYSPFCEKVYWAYDRCKAAYGIRAVFQGVFPTTLMEFSAAS---VPVVVVDDG-SVLKDSKDVLDALCDEG-HSWLYPSPSVREVERRLGDAFGKSVARIVYHHLFSTD---EGCVLLRR---IWKVGVSPVERLLCDPLFPSIRWAMLSGLELPDGLPGFVATVDECFARVSDMLDDGRKYICGTPEMTAADITFAALAYPLVLPDEKAAVFVSWGDE-LPEGFRAEVRSRRETPAGQFVLRLYKEER 295
BLAST of mRNA_P-littoralis_Contig652.26.1 vs. uniprot
Match: A0A7J5EU63_9DELT (Glutathione S-transferase family protein n=1 Tax=Kofleriaceae bacterium TaxID=2212474 RepID=A0A7J5EU63_9DELT) HSP 1 Score: 82.4 bits (202), Expect = 1.860e-14 Identity = 68/259 (26.25%), Postives = 126/259 (48.65%), Query Frame = 1
Query: 142 RIFVLRHSNYSERLRWVLELSGEEFHE---VPVAIFFERSTAMYHSLGAGEVLPVISTSGGRGGFKTIPRLMEHLSKERW------RTWMYPVGAHE---LESKFEQAFGQAAMNVACTYLFQQEMYHETMEMLSRSLPLWQKLVVQTLGAGVVSTTNERLRLTETLSANVK-IIERTFGLVESILSDGRLYLCGDSISAADIAFASMAFPVILPEETDSVFVAYDPRS--LPRGYVEVIKSMRSRGGGIFILRLYNQK 873
R+ + S+Y E+ RW L+ + ++ E +P+ + A GA P + T G T+ L++ RW ++P G E L+ +F++ G A + YL + + T+++L++ P W++++ + + LR+ + + +I+RTF + L DGR YLCGD ++AAD+ FA++A PV+LP++ + Y PR +P + EV + R+ G + LR+Y ++
Sbjct: 6 RLITIAFSHYCEKARWALDRADIDYVEDAHLPLFSYLPLVRA-----GAKRTAPALVTDDG-----TV--LVDSTDILRWCDAHGRAEPLFPPGDDEVVALKEEFDRHLGPATRRLGYFYLLKDK--RATLDVLAKHGPRWERVLGKASRPLAAALLRRGLRIDPAGAERSRAVIDRTFSEIGERLRDGRKYLCGDRLTAADLTFAALAAPVLLPDQ----YSEYLPREELVPPAFREVADAYRATPAGEYGLRMYLER 246 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig652.26.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig652.26.1 >prot_P-littoralis_Contig652.26.1 ID=prot_P-littoralis_Contig652.26.1|Name=mRNA_P-littoralis_Contig652.26.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=361bp RLVALIDEAAVAITKARLWLWNYIPSSLRPWACRFLGTRYSPGSQANRIFback to top mRNA from alignment at P-littoralis_Contig652:105688..109202+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig652.26.1 ID=mRNA_P-littoralis_Contig652.26.1|Name=mRNA_P-littoralis_Contig652.26.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=3515bp|location=Sequence derived from alignment at P-littoralis_Contig652:105688..109202+ (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig652:105688..109202+ >mRNA_P-littoralis_Contig652.26.1 ID=mRNA_P-littoralis_Contig652.26.1|Name=mRNA_P-littoralis_Contig652.26.1|organism=Pylaiella littoralis U1_48|type=CDS|length=1083bp|location=Sequence derived from alignment at P-littoralis_Contig652:105688..109202+ (Pylaiella littoralis U1_48)back to top |