mRNA_P-littoralis_Contig652.13.1 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig652.13.1
Unique NamemRNA_P-littoralis_Contig652.13.1
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
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BLAST of mRNA_P-littoralis_Contig652.13.1 vs. uniprot
Match: D8LQI5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQI5_ECTSI)

HSP 1 Score: 219 bits (558), Expect = 3.970e-65
Identity = 108/118 (91.53%), Postives = 112/118 (94.92%), Query Frame = 2 
Query:  284 MPQADAAASKLLVKEGADGTVKFDNPAVGDFQVLDALVEYPGSFDLKIIGVDDDTFVSDIRKAVAGCLTNGEDNVIKCSTREKGKYTSITLKVHVQNSSQLYKCYEVINDDKRVKFKF 637
            MP AD AASKLL KEG DG+ KFDNPAVGDFQVLDALVEYPGSFDLKIIGVDDDTFVSDIRKAVAGCLTNGEDNVIKCSTREKGKYTSITLKV V+NS+QLYKCYEVIN+DKRVKFKF
Sbjct:    1 MPLADKAASKLLAKEGPDGSSKFDNPAVGDFQVLDALVEYPGSFDLKIIGVDDDTFVSDIRKAVAGCLTNGEDNVIKCSTREKGKYTSITLKVRVENSTQLYKCYEVINEDKRVKFKF 118
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BLAST of mRNA_P-littoralis_Contig652.13.1 vs. uniprot
Match: A0A7S1BKS9_9STRA (Hypothetical protein n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1BKS9_9STRA)

HSP 1 Score: 82.0 bits (201), Expect = 2.030e-13
Identity = 58/153 (37.91%), Postives = 78/153 (50.98%), Query Frame = 2 
Query:  182 GTLFAGKGFGETPKPRKPPQEPAKDQAPRKARSLMPQADAAASKLLVKEGADGTVKFDNPAVGD-FQVLDALVEYPGSFDLKIIGVDDDTFVSDIRKAVAGCLTNGEDNVIKCSTREKGKYTSITLKVHVQNSSQLYKCYEVINDDKRVKFKF 637
            G   AG GFG   K      E  +D +PR    L            ++    G     N   G+  +V ++LVEYP +F +KI+G  +  FV+D+   VA     G  +V   S REKGK+TSIT++  V+N+  LYK YEVI  D RVKFKF
Sbjct:  154 GKSAAGAGFGAAKKKNTRKVEIGEDGSPRIVNDLN----------NLETDDQGFTLHTNEQTGEKARVFESLVEYPCTFPIKIVGAKEGQFVTDMVDLVAETCNVGRTDVTY-SEREKGKWTSITVQAPVENAQMLYKVYEVIGRDPRVKFKF 295
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BLAST of mRNA_P-littoralis_Contig652.13.1 vs. uniprot
Match: A0A6U1NFE4_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A6U1NFE4_9STRA)

HSP 1 Score: 77.8 bits (190), Expect = 7.770e-13
Identity = 44/125 (35.20%), Postives = 68/125 (54.40%), Query Frame = 2 
Query:  263 PRKARSLMPQADAAASKLLVKEGADGTVKFDNPAVGDFQVLDALVEYPGSFDLKIIGVDDDTFVSDIRKAVAGCLTNGEDNVIKCSTREKGKYTSITLKVHVQNSSQLYKCYEVINDDKRVKFKF 637
            PR + S + Q   ++   ++K   +   +   P     +V +  VEYP  F +K+IGV    F  D+   VA C    +   IK  TR++GKY S+++   VQ +SQ+YKCYE ++ D+RV FKF
Sbjct:   67 PRSSTSAVQQRSTSSRLHILKNAGEEGDEMKKP-----RVFETHVEYPCEFQIKVIGVRQGQFEQDMVDKVARCCGVEDPTQIKYKTRDQGKYRSVSIFAPVQMASQVYKCYEELDKDERVLFKF 186
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BLAST of mRNA_P-littoralis_Contig652.13.1 vs. uniprot
Match: A0A7S0L5V2_9EUKA (Hypothetical protein n=1 Tax=Coccolithus braarudii TaxID=221442 RepID=A0A7S0L5V2_9EUKA)

HSP 1 Score: 75.5 bits (184), Expect = 1.680e-12
Identity = 39/89 (43.82%), Postives = 56/89 (62.92%), Query Frame = 2 
Query:  368 GDFQVLDALVEYPGSFDLKIIGVDDDTFVSDIRKAVAGCLTNGEDNVIKCSTREKGKYTSITLKVHVQNSSQLYKCYEVINDDKRVKFK 634
            G F+ L   VEYP    +K+IG+++  FVSD+R   AG +T  E+ ++    R+KGKY SITL++  Q++  +Y  Y  IN D RVKFK
Sbjct:   56 GSFRTL---VEYPCELSVKVIGLNEGAFVSDMRTMCAG-ITGQEEELVGVRWRDKGKYRSITLQLQFQDADMVYAVYAAINKDPRVKFK 140
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BLAST of mRNA_P-littoralis_Contig652.13.1 vs. uniprot
Match: D7FUE3_ECTSI (UPF0250 protein NE1487 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FUE3_ECTSI)

HSP 1 Score: 74.7 bits (182), Expect = 7.920e-12
Identity = 35/88 (39.77%), Postives = 54/88 (61.36%), Query Frame = 2 
Query:  377 QVLDALVEYPGSFDLKIIGVDDDTFVSDIRKAVAG-CLTNGEDNVIKCSTREKGKYTSITLKVHVQNSSQLYKCYEVINDDKRVKFKF 637
            +  + LV+YP  F++K+IG+++ +F  DI   V+  C     D          G+Y SIT+   V+N++ LYKCYE+I++D RVKFKF
Sbjct:   93 RAFEYLVDYPCEFEIKVIGINEGSFADDIAATVSAVCEVETSDVRFTVRDTTSGRYQSITVHAPVKNATMLYKCYELIDEDPRVKFKF 180
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BLAST of mRNA_P-littoralis_Contig652.13.1 vs. uniprot
Match: M2XRZ9_GALSU (Uncharacterized protein n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2XRZ9_GALSU)

HSP 1 Score: 73.6 bits (179), Expect = 3.220e-11
Identity = 40/92 (43.48%), Postives = 55/92 (59.78%), Query Frame = 2 
Query:  362 AVGDFQVLDALVEYPGSFDLKIIGVDDDTFVSDIRKAVAGCLTNGEDNVIKCSTREKGKYTSITLKVHVQNSSQLYKCYEVINDDKRVKFKF 637
            A G  +++D LV++P  F  KIIG+    FV DI   VA  L   + + ++ STR+KGKY SIT+     +S Q+Y  Y  I+ D RVKFKF
Sbjct:  113 ADGQRRLIDELVDFPCKFQFKIIGIRQGNFVEDIVDCVAEVLQI-DPSYMEVSTRDKGKYRSITIDAPCNSSEQVYSIYAAIDRDPRVKFKF 203
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BLAST of mRNA_P-littoralis_Contig652.13.1 vs. uniprot
Match: A0A7S0NTF1_9EUKA (Hypothetical protein n=1 Tax=Calcidiscus leptoporus TaxID=127549 RepID=A0A7S0NTF1_9EUKA)

HSP 1 Score: 71.2 bits (173), Expect = 6.630e-11
Identity = 43/112 (38.39%), Postives = 64/112 (57.14%), Query Frame = 2 
Query:  299 AAASKLLVKEGADGTVKFDNPAVGDFQVLDALVEYPGSFDLKIIGVDDDTFVSDIRKAVAGCLTNGEDNVIKCSTREKGKYTSITLKVHVQNSSQLYKCYEVINDDKRVKFK 634
            A+A +LL    A      D    G F+   +LVEYP    +KIIGV++  FVSD+R   AG +T  E+ ++    R+KG + SITL++  +++  +Y  Y  I+ D RVKFK
Sbjct:   46 ASAQRLLRSPAAQEPPNLDGS--GSFR---SLVEYPCELSVKIIGVNEGAFVSDMRSLCAG-ITGQEEELVGVRWRDKGNFRSITLQLCFKDADMVYAVYAAIDKDPRVKFK 151
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BLAST of mRNA_P-littoralis_Contig652.13.1 vs. uniprot
Match: A0A836CJU5_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CJU5_9STRA)

HSP 1 Score: 70.1 bits (170), Expect = 1.560e-10
Identity = 36/93 (38.71%), Postives = 54/93 (58.06%), Query Frame = 2 
Query:  365 VGDFQVLDALVEYPGSFDLKIIGVDDDTFVSDIRKAVAGCLTNGEDNVIKCSTRE--KGKYTSITLKVHVQNSSQLYKCYEVINDDKRVKFKF 637
            +G+ +  + LV+YP  F +K +G +      D+  A+ G +   E   ++ + R+   GKY S+TL   V NS  LYKCYEVI  D+RV+FKF
Sbjct:   58 MGNPRAFEYLVDYPCKFQIKAVGHNKGNLADDLA-ALVGSVCEVEPAAVEYTVRDTDSGKYRSVTLMAPVSNSDMLYKCYEVIGQDERVRFKF 149
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BLAST of mRNA_P-littoralis_Contig652.13.1 vs. uniprot
Match: A0A7S0CBH8_9STRA (Hypothetical protein n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0CBH8_9STRA)

HSP 1 Score: 72.0 bits (175), Expect = 3.370e-10
Identity = 39/87 (44.83%), Postives = 53/87 (60.92%), Query Frame = 2 
Query:  377 QVLDALVEYPGSFDLKIIGVDDDTFVSDIRKAVAGCLTNGEDNVIKCSTREKGKYTSITLKVHVQNSSQLYKCYEVINDDKRVKFKF 637
            +V +ALVEYP  F +KI+G +D TFV+D+   VA       D  +  + R  GK+ SIT+   VQ++  LY  YE I+ D RVKFKF
Sbjct:  186 RVFEALVEYPCEFQIKIVGANDGTFVTDMIALVAESCGVKSD-AVSWTERLNGKWVSITVNAPVQSAEMLYALYEDIDKDARVKFKF 271
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BLAST of mRNA_P-littoralis_Contig652.13.1 vs. uniprot
Match: A0A7S2SR06_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SR06_9STRA)

HSP 1 Score: 65.1 bits (157), Expect = 1.370e-8
Identity = 35/88 (39.77%), Postives = 53/88 (60.23%), Query Frame = 2 
Query:  380 VLDALVEYPGSFDLKIIGVDDDTFVSDIRKAVAGCLTNGEDNVIKCSTRE--KGKYTSITLKVHVQNSSQLYKCYEVINDDKRVKFKF 637
            V + +++YP  F++K+IG  +  F  D+  A+   +T      I  STRE    K+TS+++K  VQ S  LY+CYE ++ D RVKFKF
Sbjct:   84 VFERMLDYPCEFEIKVIGRLEGEFARDM-VAIISTVTGVPAMDIAFSTRETPNNKFTSVSIKATVQTSDMLYQCYEELDKDPRVKFKF 170
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig652.13.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 11
Match NameE-valueIdentityDescription
D8LQI5_ECTSI3.970e-6591.53Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A7S1BKS9_9STRA2.030e-1337.91Hypothetical protein n=1 Tax=Corethron hystrix Tax... [more]
A0A6U1NFE4_9STRA7.770e-1335.20Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A7S0L5V2_9EUKA1.680e-1243.82Hypothetical protein n=1 Tax=Coccolithus braarudii... [more]
D7FUE3_ECTSI7.920e-1239.77UPF0250 protein NE1487 n=2 Tax=Ectocarpus TaxID=28... [more]
M2XRZ9_GALSU3.220e-1143.48Uncharacterized protein n=1 Tax=Galdieria sulphura... [more]
A0A7S0NTF1_9EUKA6.630e-1138.39Hypothetical protein n=1 Tax=Calcidiscus leptoporu... [more]
A0A836CJU5_9STRA1.560e-1038.71Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S0CBH8_9STRA3.370e-1044.83Hypothetical protein n=1 Tax=Proboscia inermis Tax... [more]
A0A7S2SR06_9STRA1.370e-839.77Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig652contigP-littoralis_Contig652:64588..72478 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog159749.K0RVH1
PFAMsDUF493
Model size1977
Max annot lvl2836|Bacillariophyta
Hectar predicted targeting categorychloroplast
Exons3
Evalue1.01e-13
EggNOG OGs2E2JJ@1|root,2S9SY@2759|Eukaryota,2XCT4@2836|Bacillariophyta
Ec32 ortholog descriptionConserved protein of Unknown function, DUF493 family
Ec32 orthologEc-10_005780.1
DescriptionProtein of unknown function (DUF493)
Cds size588
COG categoryS
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791364.1356025-UTR-P-littoralis_Contig652:64587..659241680791364.1356025-UTR-P-littoralis_Contig652:64587..65924Pylaiella littoralis U1_48UTRP-littoralis_Contig652 64588..65924 -
1680791364.1880028-UTR-P-littoralis_Contig652:72426..724781680791364.1880028-UTR-P-littoralis_Contig652:72426..72478Pylaiella littoralis U1_48UTRP-littoralis_Contig652 72427..72478 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791364.1475267-CDS-P-littoralis_Contig652:65924..659721680791364.1475267-CDS-P-littoralis_Contig652:65924..65972Pylaiella littoralis U1_48CDSP-littoralis_Contig652 65925..65972 -
1680791364.1598296-CDS-P-littoralis_Contig652:67130..673221680791364.1598296-CDS-P-littoralis_Contig652:67130..67322Pylaiella littoralis U1_48CDSP-littoralis_Contig652 67131..67322 -
1680791364.177176-CDS-P-littoralis_Contig652:72078..724261680791364.177176-CDS-P-littoralis_Contig652:72078..72426Pylaiella littoralis U1_48CDSP-littoralis_Contig652 72079..72426 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig652.13.1prot_P-littoralis_Contig652.13.1Pylaiella littoralis U1_48polypeptideP-littoralis_Contig652 65925..72426 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig652.13.1

>prot_P-littoralis_Contig652.13.1 ID=prot_P-littoralis_Contig652.13.1|Name=mRNA_P-littoralis_Contig652.13.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=196bp
MARISRAASATILMLNALVRPVPAFLVKSSLGRATCFSSSSSSGTLFAGK
GFGETPKPRKPPQEPAKDQAPRKARSLMPQADAAASKLLVKEGADGTVKF
DNPAVGDFQVLDALVEYPGSFDLKIIGVDDDTFVSDIRKAVAGCLTNGED
NVIKCSTREKGKYTSITLKVHVQNSSQLYKCYEVINDDKRVKFKF*
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mRNA from alignment at P-littoralis_Contig652:64588..72478-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig652.13.1 ID=mRNA_P-littoralis_Contig652.13.1|Name=mRNA_P-littoralis_Contig652.13.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=7891bp|location=Sequence derived from alignment at P-littoralis_Contig652:64588..72478- (Pylaiella littoralis U1_48)
GCTGGACTTCTGAGTACTACATACACGCATCAGACAGCACCCAGCAGGTG
GCATGGCGAGAATAAGTCGAGCAGCTTCGGCAACAATTCTCATGTTGAAC
GCCCTCGTTCGCCCAGTGCCAGCATTTCTGGTCAAAAGCTCGCTTGGGAG
GGCAACATGCTTCAGCAGCAGCAGCAGCAGCGGGACACTCTTCGCTGGCA
AGGGCTTTGGGGAGACACCAAAGCCACGGAAGCCACCGCAGGAACCAGCC
AAGGATCAGGCACCAAGAAAGGCCAGGTCGTTGATGCCCCAAGCCGACGC
GGCGGCGTCTAAGCTTCTAGTGAAGGAAGGTGCAGATGGCACCGTCAAGT
TTGACAATCCTGCAGTAGGAGACTTCCAGGTTCTCGATGCCTTGGTCGAG
GTGAGCTCCCCCTCCCAACGTGAACGGACGTTGTACTCTGCGTATATATC
TGTTTTCCTGACTCACGCGGGTCATGCAGCTGCTGTCACTTCAACTCTGA
AATTTTACCAAAGGCAATATTAGCCGGTCGCCCCGGTGGTTCAGTTGGCT
ATCCACGCAACCTTCTGACATTCACGCGTGAGTTCGAATTCCAGTGCAGT
AACACGAACTGGGGCTTTTTCTCACATTGCGCGTGTGAAGGTGGAAAGCG
ATCAATTCGTGAGTAAACAAAATTCGATCGTACCATCGACGAGGGAAAGG
GATTGCTGTCCCCTTTCTCGCGATAAAAGCTCAACCAAAAAGGCAAGCAC
CGCAGAGGGAAGTGGAGCAAAAAAAAAAAAAAAACTGTGTTGACTTCCCC
CTGTGTGACCCCGGTTGGAGCGTCTACCTACCCGAAAGGTGTAGAGTGGC
GCCCAATGAAAGGGATGACAACACACACAACTACTGTTGCACCATACATT
TTTGTGGACGGCTGCTGTGTAGCGAGTGTGTAGGTGGCCTGTTACCCCAG
TCTCGTCAAGCCTCCCGTTCTTCACTAGCGTTCATGTTCACCCACAGAGA
CTCCTCTCATCAAAACGGACTCATGCACGGGGAAATATCATACCCAGGCA
CTCGTTTAATGTCATGAGCAAGTCCTGAATTCCTTCCAAGTAAACATCGC
CCGCAGAGGAGATCTGCGGGTCCGTCCCAGTTTGCTATTTGCTACTGTAT
ATGTATCTCTCGGACGGCCGCACTATTTTGACGCCCATGAAAGTGGTGCC
AAGAAGGTGAAGATGCCCTTTGATGCCCTTTACTTATGTATTCTAACCCT
ACCGTACTGTAGCACAGACCTGTGGTACGATTTCGAAAACGGCAGCCACA
CCGGCGCCTGCCAGGTCCTCCGGTGGCCGCGCTTTGTTTGGCGGGAGTGT
TTTGGGTGAGGGTCAGTTGCTGCAGTGCAAACCAATGATACGTCCAGCAG
CAGTACTGCTGCAGCGGTAAAAGAGGGTAGTCAATCAAATCAAATCAAAG
CCTACAAATAAATACGAAGTAATGAGTACGTCGTATTGATAACGAGTTGT
GTCTGGAGCGGAGTCGAGGAGGATGCTTGAGACACCATGACTAACAACCA
GTTTGAGAAGAGAGGCAACGAAAAGCCTGATACTTGGCCAGGCCGCCGAG
TGTCGCACCAGGTGCCCAGTCGCATTATCGGCTGCATCGCGGCATGGCCC
AGAGCGTCGCTGCTTGTCCGTTTTAGAATAGCACAAGAGCAGCACGTACG
ACCCTGCTGCTGTACAAATGTGCATGTCGGTTACCGCCAATCAGTCAAAT
GAATACACCAGCAGTATGTCCAATTTACAATCGAAGGAGGCACCTACTGC
AGTGGTGGCAACAACCGCGATTGCTGCTGCACGTTGCTGTTGTTGCTCTT
GCTGTTGCTGAAGAAAACGTCGGTAGGAGACACCAAAACATTCTGAAACC
ACTTCGGGAGCAGGGCTAGGGTTCCATGACAAACACAACATGGAAGCGAC
TAACATGCGTCCAGCAGTTGGCGCGATTGCGGCTGCTGCTGTCAACCAAG
AAAAATGTGGGTTTGTTGATTTTTGATAATCACTGAAATCCGAAGTCACA
TGATGAGCGATTTGATGAGATGACGAGTAAGTCCATCCAGTCTTTACTTA
ATGTTCTGTCGAGCTTAGCGAGAGGTTTCGAGACACGTTCGCCAGCTGGC
GATAAGAAGCCCCAAACACCCAAAATCTTGGCGAGCTCGTAGAGTGTCAA
AATAGGCACCTGGTAGCGTCCTCGGCCGGATCGCAGCGCGGCTCAGACCA
CGTGCCTCCCAGCCCGAAAAATCGGACGTGGGCCCGGGACGACAAGTTCT
CGAGGCGGTATGCCGGTTGGGAAGGCAAGGTACAGAATTCCAACTAGAGC
CAATGTAGAAAAGTGAGAATGAGGTTCCTATATTCCGGTTGCGATATAAA
AGTGGGAATGAGGTTTCAAAATCCACAGTTTATTACTTGAGAGTATACAA
CCTGCACAGCAGTAAAATTTCCGGCGAGTAAGCCGCGGCCAGGCTGTGTA
CTTGTACGCCTCTATCTCCAGGAATTCGTCGCAGGGTCTGCTGGATTGGG
GTGCCTTTTTCCTTTTTTTTGAGAAAACGAGACGAACCGCGTACAAGCAC
GCGCGGAAAAATACAATTCAAGATTCTCCAGACGGGATTTATTTCACTTT
CCACTTTTCATGACAGAAAAAATGCTCCGGAAACCAGGAAATTCGGCTTA
AGATAAGCAGGAAGGTCAATTTGGCCCATTTTGGGAGATCTCGGGTGAAG
CTTTCCCAAACTCAGCAGTCTTAAAAACAATTTCCCGACGCGGCGAGATT
ACGATTACACCACAGGCGTCAGTCAACAAATCCCACCACAGCGCCATGGG
ACCTGAACGTAAGGCAGTTCCAAGAGGGCTCGGAGCAACCCTGGAGTCAC
CGTGCCACCACTTTTGGCCGTTAATTGGTGACGGACACGCTCCAGGTTTG
AAAAAGGATGTACCTGGTACGTAGACCCCAACGGTCCTCCACAGTAGCAC
CACACGCCACAAACCGGAAAACTTGGAGACAAGTTCCGCGACTCCAACGC
TCTGAGGCTGAAAGTTTAGCGATTCTATCTTGCACTGTTCAGGCAGTGCC
GCCTTGATGAGAGGGCATCTGGCGGCCCGGGCAAGCTCATTCGCTGCAGC
GGGGCGACCATCGAGAAAGACTTGAAGGGGCAACGGGGTGCCCGGCGCTT
GTGCGTGCATACGAGCAGAGGTTCACCAAGGAATGGAATGTAACCGAGCC
CGTCCTACCCGTGCAAGAAACACTCGCTCAACTTTCGGCCTCAGAGCGTT
GGAGTCACGAAGCTTGTCTCCGGCCTTTTATGGTTCCGCCAGCGATCTAG
GCGGGAGCGGCAGGGGTCGCCGCATCTCCACCCAACGTGGCTATTTGACT
CAACATGATTCCGCGTTGCCTCTCCAAGTTGTTCGGTGTGTGGTGTTCGG
TGCTGCTGTGGAGGACCGTTGGGGTCCACGTACTAGCAGCAGCAGTTCGT
TGTACCCCTGCTGTATCTTTAAAAATATGGGAGTGTGTGCCGCGCCAGAT
GCGTATCGCAGTCATCATGATGTAGAACAATTGACAGAAAAAGACTCCTG
CCGGTTCCTCAGGTTGTTGTGCCGTGAGGTATGCATACAGACACCCCGAA
CGTATCCCGGCTTGTGTGCAGAAGATGTTGTCGGTGCGGCGGAAGAGGCG
GTGGATGGTTTGCCGTGCGGTGACGTGGAGGTTGACTTTCGAGGGTCGCA
GAGTGGGCAAAAGTGCGTTAGCACAGGCTAAGACGAAGTCTGAAATTTAC
CACCCTTCACTTTTGCCTGAAAAAGTGGTGGGTATGCCCACTTTTGTCCA
TTTCCCTTTCCTATTTCAATCCATGGAAAAGTCAATAACGGTGTTGTTAG
GGCACGCTGGGCTAATAAAATTTACCAAGGGGTTTGCGCAAACAACTCTG
TTTTGAGGTACAAATCAACGAGGAAAGCGTATAAATTGGATCTCGTTTGG
CCGTAGATTGACACTTCAAACTCTGCGGAATCTTAACCCCGAGAAATGTT
TGGCCCAAGGATATCCTCGGTACACCAGCTGAACTCGTATTCACTTTGGT
TGTTGGCCGTGGGGGGGATAGACACGCGGAGAATGGCGGCATCTCGCAAA
CTGCTGTGAATCGAGATACGATTCGCACGAGTACCTCTGGAAAAGTTATT
GGCTGCCTGCCGCTGCTGTCAAGGTCAAGGCGCGGGACGCCACTCAGACA
CCGCGTGGGTGGGCTGTCGCGATTTCGAGCAACGTGATTGCTTGTGACAA
TATTGCGCTGTCCACAGCCGAGGCATAGTTTTCTGGGCTTGTTTCACCGG
TTTCCACGCGGAAATATGGTGCTGAAAACTGAAATCTGAGCATCTCAATC
TCGCGATTGAAGGTCACAATGAGGATGCGCACGGTGTGTACAGTATACAC
GAAGGAGTTGAAGCTAAGTGGTGAAGTTTAGGAGATCCGGTGGGTCTGTT
TCTCCTGAGACTTTACCATGAGAGGGTGGATTATCAGGGTTCAAATGTCA
GGGGAGGCACCGCCAAGAGCTTTAGTTATTTATTCAGAAGTTTGACACGC
GGGGAAATCGAATTGAACTGTTCGAGCCTCAAATATCATCATGAGCCCCG
GAGTACTGGGCACGGCTCCCGCCCAGCCGCGCCACAACCTAAACGGGAAG
AGTTTAGACTGTTATACAAAAAAACATGTGGTACATGGTGCAAGGAAAAT
TGATGTGAGACTAATTGAGCTCTCCACTTCCTTCCCTTCTGAGTGGTGCG
TGTTCCGTGACGGCACAAAAATGCGACCGGAAGCGGTAGAGGTGTCCCTT
TGCACACACGTTAGCCGCGTCGTTTGCGTTGTACGGTACGCGAGAGAGGA
GGAGCAATGCAAGGGAAACGGAAAAAAATGACGAGGCAGGGGGGAACAAG
AACCAGTCCAGGAGTACAAGGAAACACTCAGTACATAGCGGCTGCCACTT
TCATGAGAGTCCTGAGCGATGAGTTTACGCTGGTGTTCCGTCCCAAAAAT
ACGGCGCGGACTTTCGGGCCCGAATCGGCTTTCGTTTCAACAACCAGCCG
CACCCAGCTATTTGTCTTCCCACTGCGCCATCTCATTTGCCCCCTGGACC
TCCCAGTACCCTGGCAGTTTCGATCTGAAGATCATCGGAGTGGATGACGA
TACCTTCGTGAGCGACATCCGAAAAGCGGTGGCCGGTTGTTTGACGAACG
GGGAGGACAACGTGATCAAGTGCTCCACACGGGAGAAGGGGAAGTACACG
AGCATCACGCTCAAGGTCCACGTCCAAAACTCATCCCAGCTCTACAAGGT
GACCGACTCCCCGCTTACTCTCTAATTCAACAGCGCGCGCGTTTGTTCCT
GGTTGCTCGCACACTATGAAGCATGATTCGACACTGATCTGTACGGTATG
TAGCGCTCTCGTGCCTCCTTTTTGTGACGTGTTGTCCGCTTTGGAGCTGG
CTAAAAGGAGTTGGTTTGTACTTCGTAGGTCTATAACACCTTGGAATCGT
GTTGAGCGGCGGAAAAACCTCGCAGTGAAAACACGCGCTGCCACTTACTT
CGATATGGGCAAAGTTCCCTGAAATTTCAAGTAACGAGTGCGGGCAAAAC
AGGCTTGAAATCACTTGAGTTCTCAACAGGAAATTATGTACTTTATGACA
GAAAACTTGGAATAAGCCCGAAAGGTACGTGATGCGCAGGACTAGCGTTT
TCATATTGTCACCGCAGGAGTTGAGAAAGGCGTCGGGGACTCCCGGAGAT
GCTTGGTGCAAGCCTTCGACCGAAACATCCTGACTGTTTGCGAATGCTAC
AGGGAATGATGGAAACCCTGTGTGGCTTTCGAGCTCAAGCACAGCAGTAC
TGTACAAAGTTGTGTTTGTATTTTTCGTGTGCGTGTGTGGGTGTACGTGC
GCCCGGGTTCAAGTTTTGTTTTTTTCAACCAAAACAGAAAACATGACAGG
CGATCAAAATAACATGGCTTTCCGGGTGCACAGCAGTGGATGCGACGTGC
AGGTTGCCTCACCATATATGCGAGCGACCACGGTGCCCCTTCGCCCCGCG
CGTTTTTCAGTTTCGGAGGATATTGCTTGCTCCCTCGACTCCTTTTCCCC
TGGTTCACGCCCCCGCGTCCGACAGGCCTGACTTTGCCGTTGTCTTATCC
TTGAGCTCAGCTCAAGCTCAACATTTTAAGCTCAACATTACCGAGATCGA
AAAAGCACACCCGTTCATGTGCGGCAGACATCACCGCAGCAGCAAGTGGT
GATCGTCGGGATGTTGTTATAGTGCTGCAACACGGGATCGCTCGCATACA
CTCCTGTACGTGTGTTGTATTTGATCACGCCCGCAGAGGACTCACTGGCA
CTCCTACACGCATCCTTTGCTGCATGACGTAATACTCCAGTATATATTTT
TTGTCTATATCGTCGGTTGTTTTTCCCATTCCGTTCGCGCATCTTTTTTT
TTGCAGTGCTACGAAGTGATCAATGACGACAAACGAGTAAAATTCAAGTT
CTGAGGTCGTTGACACAGCGACCGAAGAATGCGATGTGACGGCATCATCC
GACACCGACGCGCGATGGCCGACGAGTCAAGACAAGCCAACCGCAGAAAC
ATCGGATGTAGAAACCTTTCTACCGCGACACCACACTCCCTTCTGTTGAG
CATGATCAGTCGCAGCAGCAGCAGCAACAGCAGCAGCAGAAGAAGAAGAT
AAAGCAGCAGCAGTAGGAGGGCCATCATTTTTACACTGACAGCTCTTCAC
CAACGTGTGTCTCTCCCGTACTTCGCCGTATGTAATGTTATTCTATGACA
CCGCGCCATTCGGTGCAAGACGTTTTTGACGTTTTTCGTAGCCTTTGTTG
TAGATGTTTTTGAAGGCTCCCACATGAAGCGGATCTCGACAAGGGCGGAG
CATGCTCACGAGAAATCGAGTTTCTGTTGATCCTCTCGTTTCTTCGCGAG
GCACTCACCATCACCAGGGCAGTATATTTCGCCCCTTTTGTGCCTTGGTC
TACGCAGTCAACTCTCCTCACGGCGGGGATTCCGCTACACCGGCAGCGCC
CGCCTCGTGAGTCACGGGTCGACGGGCTAGCATGCAATAAATACGACACG
ACTCTGTTGTGGGCAGTTTGCAGTCGGGCGCGTAGAGCAGAGCAGGGTAG
AAGTAGTCTGGGGGTATGACGGACCGAGACTCGCGTGAATTGCGCCCCCT
CAAGCACTGTGTTCCCCACGTGACGAAGAGAGAGAGCGTGGAGGAGAGGA
GAGCAAAAAATAAGACCGGAGAAAGAGGAGTGGAGACCGAGGATGTTTTG
AAGAAGGATAAAAAACATGGAGACGTGGATTTTTCAGGCAATTGTGAACG
AGATTTAGACTCAACGCGGTGTGGAGTACAGTAAAGTAGAGTAGAGCAGA
ATGCCCACCGGTAACTAGGCCTTCCGCGACAGCAGCCAGTCGAGTGCCAG
TCGCAGTGTGTGGATGCTTGTCATGCGTGTGAATGTGCGAGTGTTGTTTT
TTGGAAAATAAAAAATGAACAACAGCGCGAAATGCAAACCCTCCGATGCA
GGAAAGAATGCACCTGAAGCGATCATAGCACCCATTGATGGATTTTCTTG
CGAGGAATGGCCAAGGAGCAAGAAAAACTGTCGGGGGAGCTTTCGTAAGA
AAATTTGCACTGCTTAGCATGCACATCGTACTGGCCGTCGTAGTGCTGAG
GGTAACGTGGTCAACACAACAGGGTGTATGAGCGGCAGGTTCGTTAGTCT
TTAGGGTCAACAAAAAGAAAACAGCTCGATCATCAAAGCGGAATTCGTTG
TCCCCGGTGTAGGTTATCCCTTTGTCTGAGACTCCGGAAGC
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Coding sequence (CDS) from alignment at P-littoralis_Contig652:64588..72478-

>mRNA_P-littoralis_Contig652.13.1 ID=mRNA_P-littoralis_Contig652.13.1|Name=mRNA_P-littoralis_Contig652.13.1|organism=Pylaiella littoralis U1_48|type=CDS|length=588bp|location=Sequence derived from alignment at P-littoralis_Contig652:64588..72478- (Pylaiella littoralis U1_48)
ATGGCGAGAATAAGTCGAGCAGCTTCGGCAACAATTCTCATGTTGAACGC
CCTCGTTCGCCCAGTGCCAGCATTTCTGGTCAAAAGCTCGCTTGGGAGGG
CAACATGCTTCAGCAGCAGCAGCAGCAGCGGGACACTCTTCGCTGGCAAG
GGCTTTGGGGAGACACCAAAGCCACGGAAGCCACCGCAGGAACCAGCCAA
GGATCAGGCACCAAGAAAGGCCAGGTCGTTGATGCCCCAAGCCGACGCGG
CGGCGTCTAAGCTTCTAGTGAAGGAAGGTGCAGATGGCACCGTCAAGTTT
GACAATCCTGCAGTAGGAGACTTCCAGGTTCTCGATGCCTTGGTCGAGTA
CCCTGGCAGTTTCGATCTGAAGATCATCGGAGTGGATGACGATACCTTCG
TGAGCGACATCCGAAAAGCGGTGGCCGGTTGTTTGACGAACGGGGAGGAC
AACGTGATCAAGTGCTCCACACGGGAGAAGGGGAAGTACACGAGCATCAC
GCTCAAGGTCCACGTCCAAAACTCATCCCAGCTCTACAAGTGCTACGAAG
TGATCAATGACGACAAACGAGTAAAATTCAAGTTCTGA
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