mRNA_P-littoralis_Contig651.32.1 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig651.32.1
Unique NamemRNA_P-littoralis_Contig651.32.1
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
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BLAST of mRNA_P-littoralis_Contig651.32.1 vs. uniprot
Match: A0A6H5JQM6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQM6_9PHAE)

HSP 1 Score: 328 bits (840), Expect = 5.130e-110
Identity = 161/241 (66.80%), Postives = 183/241 (75.93%), Query Frame = 2 
Query:  179 PTLAFEVTVDHAGRAIGVTQGFTGATNDKTIVRYDAAVQTIRNNKVYKDREYKLRKADGTEFTRKGCYLIVDNGYHEWVTLMAPSKYPGDVDDAAFSKMLESVRKDVECFFGILKGRFRILKLRLAYHCREDIDNIFFTCCILHNMLHSFDGMSVFKENVDWAGSAGLHDPKDHAPDTDFTSVGPR-----PATDPEEYLF---------NPQHAKLKGQLIESFAYRKKNNDVVWLSRPK 859
            PT+A+EVTVDH GRA+ VT GFTGATNDKTI+RYD+ V  IR    Y +REYKLRK +GTE TR+GC+LI+DN YHEWVTL+APSKYP    D AFS+ LESVRKDVECFFGILKGRFRILKLR+ YH RE IDNIFFTCCILHNMLH+FDG+ VF EN DW GSAG HD  +H P TD+TSVG +     P    EE            +P HA+LK QLIESFA+RKK ND+ WLSRPK
Sbjct:   17 PTIAYEVTVDHVGRALAVTNGFTGATNDKTIIRYDSGVNNIRTESQYTEREYKLRKVNGTERTRRGCFLIMDNWYHEWVTLIAPSKYPQSNKDTAFSRHLESVRKDVECFFGILKGRFRILKLRMPYHKREYIDNIFFTCCILHNMLHTFDGLDVFDENTDWTGSAGHHDAWEHDPLTDYTSVGSKGVLLLPKEGEEEECGEGGHVRKERHPDHAELKRQLIESFAFRKKINDITWLSRPK 257
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BLAST of mRNA_P-littoralis_Contig651.32.1 vs. uniprot
Match: A0A6H5K796_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K796_9PHAE)

HSP 1 Score: 296 bits (759), Expect = 3.860e-96
Identity = 149/241 (61.83%), Postives = 177/241 (73.44%), Query Frame = 2 
Query:  179 PTLAFEVTVDHAGRAIGVTQGFTGATNDKTIVRYDAAVQTIRNNKVYKDREYKLRKADGTEFTRKGCYLIVDNGYHEWVTLMAPSKYPGDVDDAAFSKMLESVRKDVECFFGILKGRFRILKLRLAYHCREDIDNIFFTCCILHNMLHSFDGMSVFKENVDWAGSAGLHDPKDHAPDTDFTSVGPR----PATDPEEYLF----------NPQHAKLKGQLIESFAYRKKNNDVVWLSRPK 859
            PT+A++VTVDH GR + VT GFTGATNDKTI+RYD+ V  IR    Y +REYKLRKA+GT+  R+GC+LIVDNGYHEWVTL+APSKYP   +D AFS+ LESVRKDV CF        RILKLR+ YH RE +DNIFFTCCILHNMLH+FDG+ VF+EN DW GSAG HD  +H P TD+TSVG +    P  + E+             +P HA+LK QLIESFA+RKK ND+ WLSRPK
Sbjct:  136 PTIAYDVTVDHDGRDLAVTNGFTGATNDKTIIRYDSGVNKIRTASQYTEREYKLRKANGTKRMRRGCFLIVDNGYHEWVTLIAPSKYPQRNEDTAFSRDLESVRKDVGCF--------RILKLRMPYHKREYVDNIFFTCCILHNMLHTFDGLDVFEENTDWTGSAGHHDAWEHDPLTDYTSVGSKGVLLPPKEGEKAECGEGGHVRKERHPDHAELKRQLIESFAFRKKINDITWLSRPK 368
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BLAST of mRNA_P-littoralis_Contig651.32.1 vs. uniprot
Match: A0A6H5JTC6_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTC6_9PHAE)

HSP 1 Score: 281 bits (719), Expect = 6.940e-92
Identity = 133/229 (58.08%), Postives = 170/229 (74.24%), Query Frame = 2 
Query:  179 PTLAFEVTVDHAGRAIGVTQGFTGATNDKTIVRYDAAVQTIRNNKVYKDREYKLRKADGTEFTRKGCYLIVDNGYHEWVTLMAPSKYPGDVDDAAFSKMLESVRKDVECFFGILKGRFRILKLRLAYHCREDIDNIFFTCCILHNMLHSFDGMSVFKENVDWAGSAGLHDPKDHAPDTDFTSVGPRPATDPEEYL-----FNPQHAKLKGQLIESFAYRKKNNDVVWLS 850
            PT+A++VTVDH  R + VT GFTG+TNDK+I+RYD AV  IR + +Y ++E+ + +ADGT +  KGCYL+VDNGYH+WVTL+ PSKYP D +D AFSK LESVRKDVECFFGI+KG FRILKL + YH +EDIDN+FFTCCILHNMLHS+D  S  +E  +WAG+AGLH+  +H P  D +SVG + ++   E +     FN +    + QLI SF YRK  ND+ WLS
Sbjct:   17 PTVAYQVTVDHTKRVLAVTPGFTGSTNDKSIIRYDTAVTKIREDPIYSEKEFTVYEADGTPYQLKGCYLLVDNGYHKWVTLIPPSKYPIDQNDLAFSKRLESVRKDVECFFGIVKGLFRILKLSIPYHKQEDIDNVFFTCCILHNMLHSYDNKSEMEEEPNWAGNAGLHNAWEHNPSLDLSSVGAKGSSASTEDVEVESGFNTR----RKQLIASFVYRKSKNDIAWLS 241
[Close]
BLAST of mRNA_P-littoralis_Contig651.32.1 vs. uniprot
Match: A0A6H5JAU4_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JAU4_9PHAE)

HSP 1 Score: 284 bits (726), Expect = 1.090e-89
Identity = 134/229 (58.52%), Postives = 171/229 (74.67%), Query Frame = 2 
Query:  179 PTLAFEVTVDHAGRAIGVTQGFTGATNDKTIVRYDAAVQTIRNNKVYKDREYKLRKADGTEFTRKGCYLIVDNGYHEWVTLMAPSKYPGDVDDAAFSKMLESVRKDVECFFGILKGRFRILKLRLAYHCREDIDNIFFTCCILHNMLHSFDGMSVFKENVDWAGSAGLHDPKDHAPDTDFTSVGPRPATDPEEYL-----FNPQHAKLKGQLIESFAYRKKNNDVVWLS 850
            PT+A++VTVDH  R + VT GFTG+TNDK+I+RYD AV  IR + +Y ++E+ + +ADGT +  KGCYL+VDNGYH+WVTL+ PSKYP D +D AFSK LESVRKDVECFFGI+KGRFRILKL + YH +EDIDN+FFTCCILHNMLHS+D  S  +E  +WAG+AGLH+  +H P  D +SVG + ++   E +     FN +    + QLI SF YRK  ND+ WLS
Sbjct:  258 PTVAYQVTVDHTKRVLAVTPGFTGSTNDKSIIRYDTAVTKIREDPIYSEKEFTVYEADGTPYQLKGCYLLVDNGYHKWVTLIPPSKYPIDQNDLAFSKRLESVRKDVECFFGIVKGRFRILKLSIPYHKQEDIDNVFFTCCILHNMLHSYDNKSEMEEEPNWAGNAGLHNAWEHNPSLDLSSVGAKGSSASTEDVEVESGFNTR----RKQLIASFVYRKSKNDIAWLS 482
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BLAST of mRNA_P-littoralis_Contig651.32.1 vs. uniprot
Match: A0A6H5KEB6_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KEB6_9PHAE)

HSP 1 Score: 284 bits (727), Expect = 4.030e-88
Identity = 162/323 (50.15%), Postives = 188/323 (58.20%), Query Frame = 2 
Query:  179 PTLAFEVTVDHAGRAIGVTQGFTGATNDKTIVRYDAAVQTIRNNKVYKDREYKLRKADGTEFTRKGCYLIVDNG----------YHE---------------WVTLMAPSKYPGDVDDAAFSKMLESVRKDVECFFGILKGRFRILKLRLAYH-------------------------------------C--------------------REDIDNIFFTCCILHNMLHSFDGMSVFKENVDWAGSAGLHDPKDHAPDTDFTSVGPR----PATDPEEYLF----------NPQHAKLKGQLIESFAYRKKNNDVVWLSRPK 859
            PT+A EVTVDHAGRA+ VT GFTGATNDKTI+RYD+ V  IR    Y +REYKLRKA+GTE TR+GC+LIVDNG          +H+               WVTL+APSKYP   +D AFS+ LESVRKDVECFFGILKGRFRILKLR+ YH                                     C                    RE IDNIFFTCCILHNMLH+FDG+ VF+EN DW GSAG HD  +H P TD+TSVG +    P  + EE             +P HA+ K  LIESFA+RKK ND++WLSRPK
Sbjct:  313 PTIACEVTVDHAGRALAVTNGFTGATNDKTIIRYDSGVNKIRTESQYTEREYKLRKANGTERTRRGCFLIVDNGMSVPKDLCVVHHKNIVAKLPSSERVLIWWVTLIAPSKYPQSNEDTAFSRHLESVRKDVECFFGILKGRFRILKLRMPYHKREYIDNIFFTCCILHNMLHTGGXFSRHLESVRKDVECFFGILKGRFRILKLRMPYHKREYIDNIFFTCCILHNMLHTFDGLDVFEENTDWTGSAGHHDAWEHDPLTDYTSVGSKGVLLPPKEGEEEECGEGGHVRKERHPYHAESKRHLIESFAFRKKINDIIWLSRPK 635
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BLAST of mRNA_P-littoralis_Contig651.32.1 vs. uniprot
Match: A0A6H5KY50_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KY50_9PHAE)

HSP 1 Score: 271 bits (693), Expect = 1.120e-85
Identity = 131/225 (58.22%), Postives = 161/225 (71.56%), Query Frame = 2 
Query:  179 PTLAFEVTVDHAGRAIGVTQGFTGATNDKTIVRYDAAVQTIRNNKVYKDREYKLRKADGTEFTRKGCYLIVDNGYHEWVTLMAPSKYPGDVDDAAFSKMLESVRKDVECFFGILKGRFRILKLRLAYHCREDIDNIFFTCCILHNMLHSFDGMSVFKENVDWAGSAGLHDPKDHAPDTDFTSVGPRPATDPEEYLFNPQHAKLKGQLIESFAYRK-KNNDVVWLS 850
            PT+AF+VTVDH+GR + VT+GFTGATNDKTI+RYD AV  IR + VY +++YKL   DG +F  KGCYL+VDNGYH+W TL+ PSK P D  D  FSK LES RKDVEC+FGILKGRFRI KL + +H +E IDN+FFTCCILHNMLHSFD      E  +WAGSAGLH+  D  P+TD++SVG       E          L+ +L+ +F YR+ K  D+VWLS
Sbjct:  183 PTVAFQVTVDHSGRVLAVTRGFTGATNDKTIIRYDKAVTRIRTDPVYTEQKYKLYAQDGQQFEEKGCYLLVDNGYHKWRTLIPPSKCPIDRGDLIFSKRLESARKDVECYFGILKGRFRINKLAIGFHKQEYIDNVFFTCCILHNMLHSFDNRGDMSEEPNWAGSAGLHNAADRDPNTDYSSVGSMDGQH-EAVEVETGFGALRSKLVTNFVYRREKKRDIVWLS 406
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BLAST of mRNA_P-littoralis_Contig651.32.1 vs. uniprot
Match: A0A6H5JUX7_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUX7_9PHAE)

HSP 1 Score: 266 bits (679), Expect = 1.350e-84
Identity = 133/226 (58.85%), Postives = 157/226 (69.47%), Query Frame = 2 
Query:  179 PTLAFEVTVDHAGRAIGVTQGFTGATNDKTIVRYDAAVQTIRNNKVYKDREYKLRKADGTEFTRKGCYLIVDNGYHEWVTLMAPSKYPGDVDDAAFSKMLESVRKDVECFFGILKGRFRILKLRLAYHCREDIDNIFFTCCILHNMLHSFDGMSVFKENVDWAGSAGLHDPKDHAPDTDFTSVGPRPATDPEEYLFNPQHAKLKGQLIESFAYRKKNN-DVVWLSR 853
            PT+A++VTVDHA RAI VT+GFTG+TNDKTIV +DAAV  IR +K Y ++ + L   DGT  T KGCY + DNGYH+W  L+ PSKYP   DD  FSK LESVRKDVECFFGILKGRFRILKL +AY  +E IDN+FFTCCILHNMLH+FDGM    EN +W  SAG+       P+ D  S G +   D  +      H   K QL  SFAYRKK+  D+VWLSR
Sbjct:  105 PTIAYQVTVDHASRAIAVTEGFTGSTNDKTIVCWDAAVDKIRTDKQYTEKTFDLYNEDGTTTTLKGCYFLDDNGYHKWQILIEPSKYPLSEDDLLFSKRLESVRKDVECFFGILKGRFRILKLAMAYQSQERIDNVFFTCCILHNMLHTFDGMDQLVENTNWVSSAGVGTTLATEPEADCGSFGTKDVNDQPQLEIG--HTVRKRQLTTSFAYRKKHKKDIVWLSR 328
[Close]
BLAST of mRNA_P-littoralis_Contig651.32.1 vs. uniprot
Match: A0A6H5JPH7_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPH7_9PHAE)

HSP 1 Score: 271 bits (693), Expect = 1.460e-84
Identity = 131/225 (58.22%), Postives = 161/225 (71.56%), Query Frame = 2 
Query:  179 PTLAFEVTVDHAGRAIGVTQGFTGATNDKTIVRYDAAVQTIRNNKVYKDREYKLRKADGTEFTRKGCYLIVDNGYHEWVTLMAPSKYPGDVDDAAFSKMLESVRKDVECFFGILKGRFRILKLRLAYHCREDIDNIFFTCCILHNMLHSFDGMSVFKENVDWAGSAGLHDPKDHAPDTDFTSVGPRPATDPEEYLFNPQHAKLKGQLIESFAYRK-KNNDVVWLS 850
            PT+AF+VTVDH+GR + VT+GFTGATNDKTI+RYD AV  IR + VY +++YKL   DG +F  KGCYL+VDNGYH+W TL+ PSK P D  D  FSK LES RKDVEC+FGILKGRFRI KL + +H +E IDN+FFTCCILHNMLHSFD      E  +WAGSAGLH+  D  P+TD++SVG       E          L+ +L+ +F YR+ K  D+VWLS
Sbjct:  274 PTVAFQVTVDHSGRVLAVTRGFTGATNDKTIIRYDKAVTRIRTDPVYTEQKYKLYAQDGQQFEEKGCYLLVDNGYHKWRTLIPPSKCPIDRGDLIFSKRLESARKDVECYFGILKGRFRINKLAIGFHKQEYIDNVFFTCCILHNMLHSFDNRGDMSEEPNWAGSAGLHNAADRDPNTDYSSVGSMDGQH-EAVEVETGFGALRSKLVTNFVYRREKKRDIVWLS 497
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BLAST of mRNA_P-littoralis_Contig651.32.1 vs. uniprot
Match: D7FSK2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FSK2_ECTSI)

HSP 1 Score: 251 bits (640), Expect = 3.270e-79
Identity = 125/223 (56.05%), Postives = 155/223 (69.51%), Query Frame = 2 
Query:  179 PTLAFEVTVDHAGRAIGVTQGFTGATNDKTIVRYDAAVQTIRNNKVYKDREYKLRKADGTEFTRKGCYLIVDNGYHEWVTLMAPSKYPGDVDDAAFSKMLESVRKDVECFFGILKGRFRILKLRLAYHCREDIDNIFFTCCILHNMLHSFDGMSVFKENVDWAGSAGLHDPKDHAPDTDFTSVGPRPATDPEEYLFNPQHAKLKGQLIESFAYRKKNN-DVVW 844
            PT+ ++VTVDHAGRAI VT+GFTG+TNDKT V +DAAV+ IR +K Y ++ + +   DGT  T KGCY++VDNGYH+W  L+ PSKYP   +D  FSK LESVRKDVECFFGILKGR RIL L +A+  +E IDN+FFTCCILHNMLH+FDGM    EN +W  SAG+       P+ D  SVG +      +      HA  K QL  SFAYRKK+  D+V+
Sbjct:   60 PTIGYQVTVDHAGRAIAVTEGFTGSTNDKTTVCWDAAVEKIRTDKQYTEKTFDVYNQDGTTTTLKGCYVLVDNGYHKWQILIEPSKYPLSENDLLFSKRLESVRKDVECFFGILKGRLRILMLAMAFQSQERIDNVFFTCCILHNMLHTFDGMDQLVENTNWVSSAGVGTTSVTEPEADSGSVGTKDVNGRPQV--EAGHAVRKRQLTTSFAYRKKHKKDIVY 280
[Close]
BLAST of mRNA_P-littoralis_Contig651.32.1 vs. uniprot
Match: A0A6H5JBE2_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBE2_9PHAE)

HSP 1 Score: 251 bits (642), Expect = 2.040e-77
Identity = 126/228 (55.26%), Postives = 160/228 (70.18%), Query Frame = 2 
Query:  179 PTLAFEVTVDHAGRAIGVTQGFTGATNDKTIVRYDAAVQTIRNNKVYKDREYKLRKADGTEFTRKGCYLIVDNGYHEWVTLMAPSKYPGDVDDAAFSKMLESVRKDVECFFGILKGRFRILKLRLAYHCREDIDNIFFTCCILHNMLHSFDGMSVFKENVDWAGSAGLHDPKDHAPDTDFTSVGPRPATDPEEYLFNPQHAKLKGQLIESFAYRKKNN-DVVWLSRPK 859
            PT+ ++VTV+HAGR + VT+GFTG+TNDKTI+  D AV  IR +K Y ++ + + K DGT  T KGCYLIVDNGYH+W  L+ PSKYP    D  FSK LESVRKDVECFFGILK RFRILKL + Y  +E +D +FFTCCILHNMLH+ DGM   +E+V+W GSA L +   H  + D +SVG +   D  +      HA+LK +L  +F YRKK+  D+VWLSR +
Sbjct:  229 PTVGYQVTVNHAGRVLAVTEGFTGSTNDKTIICCDEAVDRIRTDKQYAEKPFTVHKKDGTTETLKGCYLIVDNGYHKWRMLIEPSKYPLSEADLLFSKRLESVRKDVECFFGILKMRFRILKLAMTYQKQERLDYVFFTCCILHNMLHTHDGMGGLEEDVNWVGSAELQNTSGH--NLDSSSVGTKDLNDKPQV--EAAHAELKRKLTTNFLYRKKHKKDIVWLSRKR 452
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig651.32.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JQM6_9PHAE5.130e-11066.80Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K796_9PHAE3.860e-9661.83Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JTC6_9PHAE6.940e-9258.08DDE Tnp4 domain-containing protein n=1 Tax=Ectocar... [more]
A0A6H5JAU4_9PHAE1.090e-8958.52Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KEB6_9PHAE4.030e-8850.15DDE Tnp4 domain-containing protein n=1 Tax=Ectocar... [more]
A0A6H5KY50_9PHAE1.120e-8558.22Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JUX7_9PHAE1.350e-8458.85DDE Tnp4 domain-containing protein n=1 Tax=Ectocar... [more]
A0A6H5JPH7_9PHAE1.460e-8458.22Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
D7FSK2_ECTSI3.270e-7956.05Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JBE2_9PHAE2.040e-7755.26Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig651contigP-littoralis_Contig651:162990..164438 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D7FSK2
PFAMsPlant_tran
Model size880
Max annot lvl2759|Eukaryota
Hectar predicted targeting categoryother localisation
Exons2
Evalue2.61e-41
EggNOG OGs2E2RF@1|root,2S9YA@2759|Eukaryota
DescriptionPlant transposon protein
Cds size441
COG categoryS
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791363.2248333-UTR-P-littoralis_Contig651:162989..1630071680791363.2248333-UTR-P-littoralis_Contig651:162989..163007Pylaiella littoralis U1_48UTRP-littoralis_Contig651 162990..163007 -
1680791363.2624483-UTR-P-littoralis_Contig651:163448..1634601680791363.2624483-UTR-P-littoralis_Contig651:163448..163460Pylaiella littoralis U1_48UTRP-littoralis_Contig651 163449..163460 -
1680791363.2773478-UTR-P-littoralis_Contig651:164029..1644381680791363.2773478-UTR-P-littoralis_Contig651:164029..164438Pylaiella littoralis U1_48UTRP-littoralis_Contig651 164030..164438 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791363.2455645-CDS-P-littoralis_Contig651:163007..1634481680791363.2455645-CDS-P-littoralis_Contig651:163007..163448Pylaiella littoralis U1_48CDSP-littoralis_Contig651 163008..163448 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig651.32.1prot_P-littoralis_Contig651.32.1Pylaiella littoralis U1_48polypeptideP-littoralis_Contig651 163008..163448 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig651.32.1

>prot_P-littoralis_Contig651.32.1 ID=prot_P-littoralis_Contig651.32.1|Name=mRNA_P-littoralis_Contig651.32.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=147bp
MAPSKYPGDVDDAAFSKMLESVRKDVECFFGILKGRFRILKLRLAYHCRE
DIDNIFFTCCILHNMLHSFDGMSVFKENVDWAGSAGLHDPKDHAPDTDFT
SVGPRPATDPEEYLFNPQHAKLKGQLIESFAYRKKNNDVVWLSRPK*
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mRNA from alignment at P-littoralis_Contig651:162990..164438-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig651.32.1 ID=mRNA_P-littoralis_Contig651.32.1|Name=mRNA_P-littoralis_Contig651.32.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=1449bp|location=Sequence derived from alignment at P-littoralis_Contig651:162990..164438- (Pylaiella littoralis U1_48)
TTCGCGAAGGAGATGTTCGAGGAGCATATCTACCTTCCAACAGGAACGCA
CCAAGACGAAGTGACGGACTGCTACCGCAAACTGGGTTTTACTGGAGCAA
TCGGTTCTACCGACGTTACTCACGTCGGCTGGGGCATGTGTCCGTTCACC
CTTGGCCGTTCTTTCACGGGCAAGGGTTCCAACCCTGGCGTTCGAGGTTA
CCGTCGACCACGCGGGGCGCGCCATTGGCGTCACCCAAGGGTTCACCGGT
GCGACCAACGACAAGACGATCGTCCGCTACGACGCAGCCGTACAGACCAT
CAGGAACAACAAAGTGTACAAGGATCGAGAGTACAAGCTCAGGAAGGCGG
ATGGCACGGAGTTCACCCGGAAAGGATGCTATTTGATCGTCGACAACGGC
TATCACGAGGTGAGTGTATTGGGGGCATGGGGAGTTTAGAATATCCGAAC
GTAGTGCGTGCTCCGTAACGCTTCGGGTTGATGTGAAGCCCGAAAAAAAA
CACGCCGGTACACCGAAAGCAGACCAATGCCATATTTGTCGGTACTGAAT
GAGGATCTTTATGGCATGTCGGCCCCGTGCATCGGGCGTCGACCTTACGC
AGCGGCACACCAAGGTAAAAAACGTTTTGCCGCTTCGCGTTCCTTCTATT
CGTAATTGTTTTTGTGCTGGTTCCGTTTGGACGGTTGCGTTCACTTTCTT
ACATTTCGAGCATACATTACCCCATTTATAACACCAAAGGTTTTAAAAAC
CAATCTGCTCAGGGGTGGTCAGATGGCAAATATTGTACTTCGAAGTACAA
AGTTGTAGGCATCTGTGTTGTCCACATGTCCACACGGTTCCTCGTTCCCC
CCGAGGAGTTTGATCGTGAAAATATGTGCGTCGGGGCCTGAGGTTTCCAG
AGCCTTTCCGTAGCTCACCAGTCGTCCCTTTCGACCCCCCCCCTGCTACT
GTTGTGCCGTCGTGTGCCAAATCAACAGTGGGTCACCCTCATGGCCCCAT
CGAAGTACCCGGGTGACGTGGATGACGCGGCCTTCTCCAAGATGCTTGAG
AGTGTGCGCAAGGATGTGGAGTGTTTCTTCGGCATTCTGAAAGGGCGCTT
CAGAATCCTGAAGCTCCGCCTGGCCTACCACTGCAGGGAAGACATCGATA
ACATCTTCTTCACGTGCTGCATTCTCCACAACATGCTCCACTCCTTCGAC
GGCATGAGCGTGTTCAAGGAGAACGTCGACTGGGCAGGCAGCGCTGGTCT
GCACGACCCCAAGGACCACGCCCCAGACACGGACTTCACGTCGGTCGGGC
CGAGGCCGGCAACCGACCCGGAGGAGTACTTGTTCAATCCGCAACATGCA
AAGCTGAAGGGCCAGCTGATCGAGAGTTTTGCCTACCGCAAGAAAAACAA
TGACGTTGTCTGGCTCTCTAGGCCCAAGTAGAGTTGAGGTGATTTGGAT
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Coding sequence (CDS) from alignment at P-littoralis_Contig651:162990..164438-

>mRNA_P-littoralis_Contig651.32.1 ID=mRNA_P-littoralis_Contig651.32.1|Name=mRNA_P-littoralis_Contig651.32.1|organism=Pylaiella littoralis U1_48|type=CDS|length=441bp|location=Sequence derived from alignment at P-littoralis_Contig651:162990..164438- (Pylaiella littoralis U1_48)
ATGGCCCCATCGAAGTACCCGGGTGACGTGGATGACGCGGCCTTCTCCAA
GATGCTTGAGAGTGTGCGCAAGGATGTGGAGTGTTTCTTCGGCATTCTGA
AAGGGCGCTTCAGAATCCTGAAGCTCCGCCTGGCCTACCACTGCAGGGAA
GACATCGATAACATCTTCTTCACGTGCTGCATTCTCCACAACATGCTCCA
CTCCTTCGACGGCATGAGCGTGTTCAAGGAGAACGTCGACTGGGCAGGCA
GCGCTGGTCTGCACGACCCCAAGGACCACGCCCCAGACACGGACTTCACG
TCGGTCGGGCCGAGGCCGGCAACCGACCCGGAGGAGTACTTGTTCAATCC
GCAACATGCAAAGCTGAAGGGCCAGCTGATCGAGAGTTTTGCCTACCGCA
AGAAAAACAATGACGTTGTCTGGCTCTCTAGGCCCAAGTAG
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