mRNA_P-littoralis_Contig650.24.2 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig650.24.2
Unique NamemRNA_P-littoralis_Contig650.24.2
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
BLAST of mRNA_P-littoralis_Contig650.24.2 vs. uniprot
Match: A0A6H5K6L9_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K6L9_9PHAE)

HSP 1 Score: 311 bits (796), Expect = 1.090e-99
Identity = 173/389 (44.47%), Postives = 235/389 (60.41%), Query Frame = 1
Query:   10 FQKRFNAWYYRFLKRHRFSIRRKTSVGQKKPEGWEGKAWAFIQKLRSSLREHAQEA------------------------------IFALLYNMDQTPIQAEMPPDTTVEKTGTKSACITTGGETEKLRYTVVLAVRGDGQKVRPRIIYKGNPFVGGTNN------------------------FGYPAGGISLGVQKSSWCDGTQSDEWVTQDFMRRPGSTSR-DQRPSVLVLDDFRCHREERFQKKLMDLAKTLVVMLGGGLTPVCQPLDRNINKEFKRGVRARYTSWIRDNYG--RSGQKVTAPSRGLVATWVKEVWDNISERTIRSCFKVCGLTLNLDGSEDHAWCIYTFGDNYREVLREQREEWEQAHG-IGLEPLQLPVIPTG 1002
            F+ +FN+WY RF KR+ FSIRR+TSVGQK P+G EG AWA + KLR +L + A E                               +F  L NMDQTP+Q E+P +TT+EKTG K A I+TGG+ EK R+T+VLAV  DG+KV PRII+KG PF   T +                         G+PA G+S GVQ+ SW D  + + W++  +  RP + S   QRP +LVLDDF+CH++E F   L   A T+V+ + G LTP+ QPLDR +NK+ KR +R +YT++        RSG K+  P RG+V+TW KE W++ +  T+++CF +CGLTL LDGSEDHAWC + FG++YR++L EQR  W   H  + L PL+LP +P G
Sbjct:   27 FKVKFNSWYQRFRKRNGFSIRRRTSVGQKLPKGDEGMAWATVMKLREALVKRAGEIYARRHPPAPDESPIKGEDLTSEQLASVEAEVFEELGNMDQTPVQHEIPVETTLEKTGAKDARISTGGK-EKERFTLVLAVMADGKKVSPRIIFKGTPFTPPTVSGKGKSTLPRKNSVAWEIHPANRAKHGHPANGMSFGVQEKSWSDQRECNGWISGSWKLRPNNGSIVQQRPCILVLDDFKCHKDEGFIAALKRDANTIVIFIPGRLTPLLQPLDRMLNKQMKRLLRRKYTAYSASAVADARSG-KLKPPERGVVSTWCKEAWESSTPETVKTCFMICGLTLALDGSEDHAWCEHNFGEDYRDLLEEQRAVWLAEHADVTLPPLKLPKVPGG 413          
BLAST of mRNA_P-littoralis_Contig650.24.2 vs. uniprot
Match: A0A6H5KE45_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KE45_9PHAE)

HSP 1 Score: 294 bits (752), Expect = 8.230e-92
Identity = 175/416 (42.07%), Postives = 226/416 (54.33%), Query Frame = 1
Query:   10 FQKRFNAWYYRFLKRHRFSIRRKTSVGQKKPEGWEGKAWAFIQKLRSSLREHAQEA------------------------------IFALLYNMDQTPIQAEMPPDTTVEKTGTKSACITTGGET-------------------------EKLRYTVVLAVRGDGQKVRPRIIYKGNPFV------------------------GGTNNFGYPAGGISLGVQKSSWCDGTQSDEWVTQDFMRRP--GSTSRDQRPSVLVLDDFRCHREERFQKKLMDLAKTLVVMLGGGLTPVCQPLDRNINKEFKRGVRARYTSWI----RDNYGRSGQKVTAPSRGLVATWVKEVWDNISERTIRSCFKVCGLTLNLDGSEDHAWCIYTFGDNYREVLREQREEWEQAH-GIGLEPLQLPVIPT 999
            F+ +F +WY RF KR++FSIRR+TSVG + P+G EG AWA + KLR +L E A E                               +F  L NMDQTP+Q EMP +TT+EKTG K A I TG                            EK R+T+ LAV  DG KV  RII+KG PFV                           +  G P GG+S GVQ+ SWCD  +   W+   +  RP  GS  R QR  +LVLDDF+CH+++ F   L   A T+V+ + GGLTP+ QPLDR +NK+ KR +R  YT+      RD   ++G K+  P RG VATW K  W +I+  T+++CFK+CGLTL LDGSEDHAWC++ FGD YRE+L +QR EW   H  + L PLQLP +P 
Sbjct:  114 FKSKFKSWYQRFRKRNKFSIRRRTSVGIRLPKGHEGMAWATLMKLRKALLERAGEIYAQRYPPAPGESPIRGEDLSSSQLELVTDELFKDLGNMDQTPVQYEMPVETTLEKTGAKDARIATGAGVCCIRTILKPLPYPPTSCILPPPPGKEKERFTLCLAVSADGTKVPLRIIFKGTPFVPPATPGKGKATQPRKNSIAWEVLPANRSKHGLPVGGMSFGVQEKSWCDLREYKLWIKDSWKLRPNNGSVVR-QRRCILVLDDFKCHKDDGFIAALKREANTIVIFIPGGLTPLLQPLDRMLNKQMKRLLRGMYTAHTAKAARDP--KTG-KLAPPGRGAVATWCKNAWASITPETVKTCFKICGLTLALDGSEDHAWCLHNFGDGYRELLEQQRVEWLAEHPNVTLPPLQLPKVPA 525          
BLAST of mRNA_P-littoralis_Contig650.24.2 vs. uniprot
Match: A0A6H5JUK2_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUK2_9PHAE)

HSP 1 Score: 283 bits (725), Expect = 1.260e-89
Identity = 164/394 (41.62%), Postives = 222/394 (56.35%), Query Frame = 1
Query:   10 FQKRFNAWYYRFLKRHRFSIRRKTSVGQKKPEGWEGKAWAFIQKLRSSLREHAQEA------------------------------IFALLYNMDQTPIQAEMPPDTTVEKTGTKSACITTGGETEKLRYTVVLAVRGDGQKVRPRIIYKGNPFV------------------------GGTNNFGYPAGGISLGVQKSSWCDGTQSDEWVTQDFMRRPGSTSR-DQRPSVLVLDDFRCHREERFQKKLMDLAKTLVVMLGGGLTPVCQPLDRNINKEFKRGVRARYTSWIRDNYG--RSGQKVTAPSRGLVATWVKEVWDNISERTIRS-----------------------------CFKVCGLTLNLDGSEDHAWCIYTFGDNYREVLREQ 933
            F+ + N+WY RF KR+ FSIRR+TSVGQK P+G+EG AWA + KLR +L   A E                               +F  L NMDQTP+Q EMP +TT+EKTG K A I+TGG+ EK R+T+VLAV  DG+KV PRII+KG PF+                               +PA G+S GVQ+ SW D  + + W++  +  RP + S   QRP +LVLDDF+CH++E +   L   A T+V+++ GGLTP+ QPLDR +NK+ KR +R +YT++        RSG K+  P RG+V+TW KE W++I+  T+ S                             CFK+CGLTL LDGSEDHAWC + FG++YR++L EQ
Sbjct:   27 FKVKINSWYQRFRKRNGFSIRRRTSVGQKLPKGYEGMAWATVMKLREALVRRAGEIYARRHPPAPDESPIKGEDLTFEQLASVEAEVFKELGNMDQTPVQHEMPVETTLEKTGAKDARISTGGK-EKERFTLVLAVMADGKKVSPRIIFKGTPFIPPAVSGKGKSTLPRKNSVAWEIHPANRAKHDHPANGMSFGVQEKSWSDQRECNGWISGSWKLRPNNGSIVQQRPCILVLDDFKCHKDEGYIAALKRDANTIVIVIPGGLTPLLQPLDRMLNKQMKRLLRGKYTAYSASAVADARSG-KLKPPERGVVSTWCKEAWESITPETVSSVRKERFALGDVRAWSGENPACSVXETVKTCFKICGLTLALDGSEDHAWCEHNFGEDYRDLLEEQ 418          
BLAST of mRNA_P-littoralis_Contig650.24.2 vs. uniprot
Match: A0A6H5JQM5_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQM5_9PHAE)

HSP 1 Score: 287 bits (735), Expect = 5.060e-89
Identity = 172/392 (43.88%), Postives = 224/392 (57.14%), Query Frame = 1
Query:   10 FQKRFNAWYYRFLKRHRFSIRRKTSVGQKKPEGWEGKAWAFIQKLRSSLREHAQEA------------------------------IFALLYNMDQTPIQAEMPPDTTVEKTGTKSACITTGGETEKLRYTVVLAVRGDGQKVRPRIIYKGNPFV------------------------GGTNNFGYPAGGISLGVQKSSWCDGTQSDEWVTQDFMRRP--GSTSRDQRPSVLVLDDFRCHREERFQKKLMDLAKTLVVMLGGGLTPVCQPLDRNINKEFKRGVRARYTSWIRDNYG--RSGQKVTAPSRGLVATWVKEVWDNISERTIRSCFKVCGLTLNLDGSEDHAWCIYTFGDNYREVLREQREEW-EQAHGIGLEPLQLPVIPTGDG 1008
            F+ +F  WY+RF +RH  SIRR+TSVGQK P G+EG A+A + KLR++L E A E                               +F  L NMDQTP+Q EMP +TT+EK G K A I+TGG+ EK R+T+ LAV  DG KV  RII+KG PF+                            NFGYP  G+S GVQ+ SW D  +   W+++ +  RP  GS  + QR S+LVLDDFR +              T V+++ GGLTP+ QPLDR ++KE KR +R RYT ++       ++G K+  P RGLV+TW KE W  I+  T++ CFKVCGLTL LDGSED AWC + FG+ YREVL +QR EW  Q  G+ L PLQLP + +  G
Sbjct:  200 FRTKFKNWYHRFRERHGLSIRRRTSVGQKLPTGYEGLAFATLMKLRTALLERAGEIYARRNPPASGESPIKGKDLSPAQLESVATEVFEELGNMDQTPVQQEMPVETTLEKGGAKDARISTGGK-EKERFTLCLAVMADGGKVPLRIIFKGKPFIPPSTARRGKNTQPRKGSIAAEVLPANQTNFGYPVSGMSFGVQERSWYDACECTLWLSESWGFRPNHGSVIK-QRHSILVLDDFRTN--------------TTVILIPGGLTPLLQPLDRMLDKEMKRLMRRRYTQYMASAIADPKTG-KLQPPGRGLVSTWCKESWAAITAETVKMCFKVCGLTLALDGSEDDAWCTHNFGEGYREVLVQQRAEWGAQRPGVTLPPLQLPEVSSASG 574          
BLAST of mRNA_P-littoralis_Contig650.24.2 vs. uniprot
Match: A0A6H5KRZ8_9PHAE (DDE-1 domain-containing protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KRZ8_9PHAE)

HSP 1 Score: 284 bits (727), Expect = 3.690e-87
Identity = 172/404 (42.57%), Postives = 228/404 (56.44%), Query Frame = 1
Query:   10 FQKRFNAWYYRFLKRHRFSIRRKTSVGQKKPEGWEGKAWAFIQKLRSSLREHAQEA------------------------------IFALLYNMDQTPIQAEMPPDTTVEKTGTKSACITTGGETEKLRYTVVLAVRGDGQKVRPRIIYKGNPFV---------------------------------GGTNNFGYPA----GGISLGVQKSSWCDGTQSDEWVTQDFMRRPGSTSR-DQRPSVLVLDDFRCHREERFQKKLMDLAKTLVVMLGGGLTPVCQPLDRNINKEFKRGVRARYT----SWIRDNYGRSGQKVTAPSRGLVATWVKEVWDNISERTIRSCFKVCGLTLNLDGSEDHAWCIYTFGDNYREVLREQREEWEQAHGIG-LEPLQLPVIPTG 1002
            F+ +FN+WY RF KR+ FSIRR+TSVGQK P+G+EG AWA + KLR +L + A E                               +F  L NMDQTP+Q EMP +TT+EKTG K A I+TGGE EK R+T+VLAV  DG+KV PRII+KG PF+                                 GG  N   P     G   +   + SW D  + + W+   +  RP + S   QRP +LVLDDF+CH++E F   L   AKT V+ + GGLT + QPLDR +NK+ KR +R +YT    S + D   RSG K+  P  G+V+TW KE W++I+ +T+ +CFK+CGLTL LDGSE HAWC + FG++Y ++L EQ   W   H    L PL+LP +P G
Sbjct:  209 FKVKFNSWYQRFRKRNGFSIRRRTSVGQKLPKGYEGMAWATVMKLREALVKRAGEIYARRHPPAPDESPIKGEDLTSEQLASVEAEVFEELGNMDQTPVQHEMPVETTLEKTGAKDARISTGGE-EKERFTLVLAVMADGKKVSPRIIFKGTPFIPPTVSGKVKSTLPRKNSVAWEIHSANXARSGCHGGRQNDVSPRIIFKGTPFIPPTEKSWSDQRECNGWIPGSWKLRPNNGSIVQQRPCILVLDDFKCHKDEGFIAALKRGAKT-VIFIPGGLTSLLQPLDRMLNKQMKRLLRGKYTACSASAVAD--ARSG-KLNPPEHGVVSTWCKEAWESITSKTVETCFKICGLTLALDGSEHHAWCEHNFGEDYGDLLEEQHAVWLAEHPDDTLPPLKLPKVPGG 607          
BLAST of mRNA_P-littoralis_Contig650.24.2 vs. uniprot
Match: A0A6H5KII4_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KII4_9PHAE)

HSP 1 Score: 265 bits (677), Expect = 3.240e-82
Identity = 138/313 (44.09%), Postives = 193/313 (61.66%), Query Frame = 1
Query:  136 QKLRSSLREHAQEAIFALLYNMDQTPIQAEMPPDTTVEKTGTKSACITTGGETEKLRYTVVLAVRGDGQKVRPRIIYKGNPFVGGTNN------------------------FGYPAGGISLGVQKSSWCDGTQSDEWVTQDFMRRPGSTSR-DQRPSVLVLDDFRCHREERFQKKLMDLAKTLVVMLGGGLTPVCQPLDRNINKEFKRGVRARYTSWIRDNYGRSGQKVTAPSRGLVATWVKEVWDNISERTIRSCFKVCGLTLNLDGSEDHAWCIYTFGDNYREVLREQREEWEQAH-GIGLEPLQLPVIP 996
            + L S      +  +F  L NMDQTP+Q EMP +TT+EKTG K A ++TGGE EK R+T+VLAV  DG+KV  RII+ G PF+  T +                         G+PA G+S GVQ+ SW D  + + W +  +  RP + S   QRP +LVLDDF+CH++E F   L   A T+V+ + GGLTP+ QPLDR +NK+ KR +R++YT++          K+  P RG+V+TW K  W++I+  T+++CFK+CGLTL LDGSEDHAWC + FG++YR++L EQ   W   H  + L PL+LP +P
Sbjct:   33 EDLTSEQLASVEAEVFEDLGNMDQTPVQHEMPVETTLEKTGAKDARVSTGGE-EKERFTLVLAVTADGKKVSLRIIFMGTPFIPPTVSGKGKSTLPRKNSVAWEMHPTNRAKHGHPANGMSFGVQEKSWSDQRECNGWTSGSWKLRPNNGSIVQQRPCILVLDDFKCHKDEGFIAALKRDANTIVIFIPGGLTPLLQPLDRMLNKQTKRLLRSKYTAYSASATDARSGKLKPPERGVVSTWCKGAWESITPETVKTCFKICGLTLALDGSEDHAWCAHNFGEDYRDLLEEQHAVWLAEHPNVTLPPLKLPKVP 344          
BLAST of mRNA_P-littoralis_Contig650.24.2 vs. uniprot
Match: A0A6H5JHT8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHT8_9PHAE)

HSP 1 Score: 271 bits (693), Expect = 5.790e-82
Identity = 154/351 (43.87%), Postives = 210/351 (59.83%), Query Frame = 1
Query:   10 FQKRFNAWYYRFLKRHRFSIRRKTSVGQKKPEGWEGKAWAFIQKLRSSLREHAQEA------------------------------IFALLYNMDQTPIQAEMPPDTTVEKTGTKSACITTGGETEKLRYTVVLAVRGDGQKVRPRIIYKGNPFVGGTNN------------------------FGYPAGGISLGVQKSSWCDGTQSDEWVTQDFMRRPGSTSR-DQRPSVLVLDDFRCHREERFQKKLMDLAKTLVVMLGGGLTPVCQPLDRNINKEFKRGVRARYTSWIRDNYG--RSGQKVTAPSRGLVATWVKEVWDNISERTIRSCFKVCGLTLNLDGSEDHAWCI 891
            F+ +FN+WY RF KR+ FSIRR+TSVGQK P+G+EG AWA + KL  +L + A E                               +F  + NMDQ P+Q EMP +TT++KTG K A I+TGG  EK R+T+VLAV  DG+KV PRII++G PF+  T +                         G+PA G+S GVQ+ SW D  + + W++  +  RP + S   QRP +LVLDDF+CH +E F   L   A T+V+ + GGLTP+ QPLDR +NK+ KR +R +YT++        RSG K+  P RG+V+TW KE W++I+  T+++C K+CGLTL LDGSEDHA CI
Sbjct:  221 FKFKFNSWYQRFRKRNGFSIRRRTSVGQKLPKGYEGMAWATVMKLCEALVKRAGEIYARRHPPAPDESPIKGEDLNSEQLASVEAEVFEEVGNMDQMPVQHEMPVETTLDKTGAKDARISTGGGNEKERFTLVLAVTADGKKVSPRIIFEGTPFIPPTVSGKGKSTRPRKNPVAWEMHPANRAKHGHPANGMSFGVQEKSWSDQRECNGWISGSWKLRPNNGSIVQQRPRILVLDDFKCHNDEGFIAALKRDANTIVIFIPGGLTPLLQPLDRMLNKQMKRLLRGKYTAYSPSAVADARSG-KLKPPERGVVSTWCKEAWESITPETVKTCSKICGLTLALDGSEDHA-CI 569          
BLAST of mRNA_P-littoralis_Contig650.24.2 vs. uniprot
Match: A0A6H5JTG5_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTG5_9PHAE)

HSP 1 Score: 265 bits (676), Expect = 4.270e-80
Identity = 163/398 (40.95%), Postives = 219/398 (55.03%), Query Frame = 1
Query:   10 FQKRFNAWYYRFLKRHRFSIRRKTSVGQKKPEGWEGKAWAFIQKLRSSLREHAQEA------------------------------IFALLYNMDQTPIQAEMPPDTTVEKTGTKSACITTGGETEKLRYTVVLAVRGDGQKVRPRIIYKGNPFVGGTNN------------------------FGYPAGGISLGVQKSSWCDGTQSDEWVTQDF--------MRRPGSTSR-DQRPSVLVLDDFRCHREERFQKKLMDLAKTLVVMLGGGLTPVCQPLDRNINKEFKRGVRARYTSWIRDNYG--RSGQKVTAPSRGLVATWVKEVWDNISERTIRSCFKVCGLTLNLDGSEDHAW--CIYTFGDNYREVLREQREEWEQAHGIGLEPLQLPVIPTG 1002
            F+ +FN+WY RF KR+ FSIRR+ SVGQK P+G+EG AWA + KLR +L + A E                               +F  L NMDQTP+Q EMP +TT+E TG K A I+TGG+ EK R+T+VLAV  DG+ V P II+KG PF+  T +                         G+PA G+S GVQ+ SW    + + W+   +        M RP + S   QRP +LVLDDF+CH++E F   L   A T+V+ + GGLTP+ QPLDR +NK+ KR +R +YT++        RSG K+  P RG+V+TW KE W+ ++  T+ +CFK+CGLTL LDGSEDHA   CI    D                  + L PL+LP +P G
Sbjct:  181 FKVKFNSWYQRFRKRNGFSIRRRASVGQKLPKGYEGMAWATVTKLREALVKRAGEIYARRHPPAPDESPIKGEDLTSEQPASVEAEVFEELGNMDQTPVQHEMPVETTLEDTGGKDARISTGGK-EKERFTLVLAVMADGKMVSPCIIFKGTPFIPPTVSGKGKSTLPRKNSVAWEVHPANRAKHGHPANGMSFGVQEKSWSGQQECNGWIPGSWKLCPNNGSMXRPNNGSIVQQRPCILVLDDFKCHKDEGFIAALNRDANTIVIFIPGGLTPLLQPLDRMLNKQMKRLLRGKYTAYSAPAVADARSG-KLKPPERGVVSTWCKEAWEFVTSETVNTCFKICGLTLALDGSEDHACTPCIAEHPD------------------VTLPPLKLPKVPEG 558          
BLAST of mRNA_P-littoralis_Contig650.24.2 vs. uniprot
Match: A0A6H5KEE8_9PHAE (DDE-1 domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KEE8_9PHAE)

HSP 1 Score: 264 bits (674), Expect = 4.500e-80
Identity = 157/389 (40.36%), Postives = 206/389 (52.96%), Query Frame = 1
Query:   10 FQKRFNAWYYRFLKRHRFSIRRKTSVGQKKPEGWEGKAWAFIQKLRSSLREHAQEA------------------------------IFALLYNMDQTPIQAEMPPDTTVEKTGTKSACITTGGETEKLRYTVVLAVRGDGQKVRPRIIYKGNPFV------------------------GGTNNFGYPAGGISLGVQKSSWCDGTQSDEWVTQDFMRRP--GSTSRDQRPSVLVLDDFRCHREERFQKKLMDLAKTLVVMLGGGLTPVCQPLDRNINKEFKRGVRARYTSWIRDNYG--RSGQKVTAPSRGLVATWVKEVWDNISERTIRSCFKVCGLTLNLDGSEDHAWCIYTFGDNYREVLREQREEWEQAH-GIGLEPLQLPVIPT 999
            F+ +F +WY RF KR++F+IRR+TSVGQK P+G EG AWA + KLR +L E A E                               +F  L NMDQTP+Q E                    G  EK R+T+ LAV  DG+KV  RII+KG PFV                           +  G P  G+S GVQ+ SWCD  +   W+   +  RP  GS  R QR  +LVLDDF+CH+++ F   L   A T+V+ + GGLTP+ Q LDR +NK+ KR +               ++G K+  P RG VATW K  W +I+  T+++CFK+CGLTL LDGSEDHAWC++ FGD YRE+L +QR EW   H  + L PLQLP +P 
Sbjct:  168 FKSKFKSWYQRFRKRNKFNIRRRTSVGQKLPKGHEGMAWATLMKLRKALLERAGEIYAQRYPPAPGESPIRGEDLSSSQLELVTDELFEELGNMDQTPVQHERD-----------------AGGKEKERFTLCLAVSADGKKVPLRIIFKGTPFVPPATPGKGKATQPRKNSIAWEVLPANRSKHGLPVEGMSFGVQEKSWCDLRECKLWIKGSWKLRPNNGSIVR-QRRCILVLDDFKCHKDDGFIAALKREANTIVIFIPGGLTPLLQLLDRMLNKQMKRLLXXXXXXXXXXXXXXPKTG-KLAPPGRGAVATWCKNAWASITPETVKTCFKICGLTLALDGSEDHAWCLHNFGDGYRELLEQQRVEWLAEHPNVTLPPLQLPKVPA 537          
BLAST of mRNA_P-littoralis_Contig650.24.2 vs. uniprot
Match: A0A6H5K583_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K583_9PHAE)

HSP 1 Score: 271 bits (694), Expect = 2.570e-79
Identity = 176/442 (39.82%), Postives = 223/442 (50.45%), Query Frame = 1
Query:   10 FQKRFNAWYYRFLKRHRFSIRRKTSVGQKKPEGWEGKAWAFIQKLRSSLREHAQEA------------------------------IFALLYNMDQTPIQAEMPPDTTVEKTGTKSACITTGGETEKLRYTVVLAVRGDGQKVRPRIIYKGNPFV------------------------GGTNNFGYPAGGISLGVQKSSWCDGTQSDEWVTQDFMRRP--GSTSRDQRPSVLVLDDFRCHREERFQKKLMDLAKTLVVMLGGGLTPVCQPLDRNINKEFKRGVRARY----------------------------------------------------TSWIRDNYGRSGQKVTAPSRGLVATWVKEVWDNISERTIRSCFKVCGLTLNLDGSEDHAWCIYTFGDNYREVLREQREEWEQAH-GIGLEPLQLPVIPTGDG 1008
            F+ +F  WY+ F +RH FSIRR+TSVGQK P G+EG A+A + KLR++L E A E                               +F  L NMDQTP+Q EMP +TT+EK G K A I+TGG+ EK R+T  LAV  DG KV  RII+KG PF+                             FGYP  G+   VQ+ SWCD  +   W+++ +  RP  GS  + QR S+LVLDDFRCHR E F K L     T V+++ GGLTP+ QPLDR +NKE KR +R                                                        S I D   ++G K+  P RGLV+T  KE W  I+  T++ CFKVCGLTL LDGSED AW  + FG+ YREVL +Q  EWE  H G+ L PLQLP + +  G
Sbjct:   96 FRTKFKNWYHCFRERHGFSIRRRTSVGQKLPTGYEGLAFATLMKLRTALLERAGEIYARRNPPASGESPIKGKDLTPAQLESVAAKVFEELGNMDQTPVQQEMPVETTLEKRGVKDARISTGGK-EKDRFTPCLAVMADGGKVPQRIIFKGKPFIPPSTAGREKNTQTRKGYIAAEVLLANRTKFGYPVSGMFFVVQEKSWCDARECTLWLSESWRFRPNHGSVIK-QRHSILVLDDFRCHRSESFVKDLRRRTNTTVILIPGGLTPLLQPLDRMLNKEMKRLMRGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTQYMASAIADP--KTG-KLQPPGRGLVSTRYKESWAAITPETVKMCFKVCGLTLALDGSEDDAWGTHNFGEGYREVLVQQHAEWEAQHPGVTLPPLQLPEVSSAPG 532          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig650.24.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5K6L9_9PHAE1.090e-9944.47DDE-1 domain-containing protein n=1 Tax=Ectocarpus... [more]
A0A6H5KE45_9PHAE8.230e-9242.07DDE-1 domain-containing protein n=1 Tax=Ectocarpus... [more]
A0A6H5JUK2_9PHAE1.260e-8941.62DDE-1 domain-containing protein n=1 Tax=Ectocarpus... [more]
A0A6H5JQM5_9PHAE5.060e-8943.88DDE-1 domain-containing protein n=1 Tax=Ectocarpus... [more]
A0A6H5KRZ8_9PHAE3.690e-8742.57DDE-1 domain-containing protein n=3 Tax=Ectocarpus... [more]
A0A6H5KII4_9PHAE3.240e-8244.09DDE-1 domain-containing protein n=1 Tax=Ectocarpus... [more]
A0A6H5JHT8_9PHAE5.790e-8243.87Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JTG5_9PHAE4.270e-8040.95DDE-1 domain-containing protein n=1 Tax=Ectocarpus... [more]
A0A6H5KEE8_9PHAE4.500e-8040.36DDE-1 domain-containing protein n=2 Tax=Ectocarpus... [more]
A0A6H5K583_9PHAE2.570e-7939.82Integrase catalytic domain-containing protein n=1 ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig650contigP-littoralis_Contig650:104104..105808 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog2880.D7FXD3
Preferred namePOGK
PFAMsBrkDBD,DDE_1,HTH_Tnp_Tc5,KRAB
Model size1012
Max annot lvl2759|Eukaryota
KEGG koko:K09228
Hectar predicted targeting categorymitochondrion
Exons4
Evalue6.9e-46
EggNOG OGsKOG3105@1|root,KOG3105@2759|Eukaryota
DescriptionDNA binding
Cds size1011
COG categoryCH
BRITEko00000,ko03000
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791362.1278074-CDS-P-littoralis_Contig650:104103..1042801680791362.1278074-CDS-P-littoralis_Contig650:104103..104280Pylaiella littoralis U1_48CDSP-littoralis_Contig650 104104..104280 +
1680791362.1400619-CDS-P-littoralis_Contig650:104385..1045021680791362.1400619-CDS-P-littoralis_Contig650:104385..104502Pylaiella littoralis U1_48CDSP-littoralis_Contig650 104386..104502 +
1680791362.1499739-CDS-P-littoralis_Contig650:105022..1051261680791362.1499739-CDS-P-littoralis_Contig650:105022..105126Pylaiella littoralis U1_48CDSP-littoralis_Contig650 105023..105126 +
1680791362.1620271-CDS-P-littoralis_Contig650:105195..1058081680791362.1620271-CDS-P-littoralis_Contig650:105195..105808Pylaiella littoralis U1_48CDSP-littoralis_Contig650 105196..105808 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig650.24.2prot_P-littoralis_Contig650.24.2Pylaiella littoralis U1_48polypeptideP-littoralis_Contig650 104104..105808 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig650.24.2

>prot_P-littoralis_Contig650.24.2 ID=prot_P-littoralis_Contig650.24.2|Name=mRNA_P-littoralis_Contig650.24.2|organism=Pylaiella littoralis U1_48|type=polypeptide|length=337bp
MEKFQKRFNAWYYRFLKRHRFSIRRKTSVGQKKPEGWEGKAWAFIQKLRS
SLREHAQEAIFALLYNMDQTPIQAEMPPDTTVEKTGTKSACITTGGETEK
LRYTVVLAVRGDGQKVRPRIIYKGNPFVGGTNNFGYPAGGISLGVQKSSW
CDGTQSDEWVTQDFMRRPGSTSRDQRPSVLVLDDFRCHREERFQKKLMDL
AKTLVVMLGGGLTPVCQPLDRNINKEFKRGVRARYTSWIRDNYGRSGQKV
TAPSRGLVATWVKEVWDNISERTIRSCFKVCGLTLNLDGSEDHAWCIYTF
GDNYREVLREQREEWEQAHGIGLEPLQLPVIPTGDGV
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mRNA from alignment at P-littoralis_Contig650:104104..105808+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig650.24.2 ID=mRNA_P-littoralis_Contig650.24.2|Name=mRNA_P-littoralis_Contig650.24.2|organism=Pylaiella littoralis U1_48|type=mRNA|length=1705bp|location=Sequence derived from alignment at P-littoralis_Contig650:104104..105808+ (Pylaiella littoralis U1_48)
ATGGAAAAATTTCAGAAGCGTTTCAACGCCTGGTACTACAGGTTCCTCAA GAGGCACCGGTTCTCGATCCGACGCAAGACGAGCGTGGGGCAGAAGAAGC CGGAAGGATGGGAGGGCAAGGCGTGGGCATTCATCCAGAAGCTTCGCTCA AGCCTGCGTGAGCACGCGCAGGAAGCCGTTCTCTTGGAGAGGGCAGCCCA GGCAGCGAAGGACGGAGGGACCGTTGAGATCGAGATGGACGTCATCGCAA CTGCGGAGGAACTTCTGGCTGTTCAGGGCAAGATCTTCGCCCTTCTGTAC AACATGGACCAGACCCCGATCCAGGCTGAGATGCCGCCGGACACCACGGT GGAGAAGACTGGTACGAAGAGCGCTTGCATCACGACAGGAGGTGAGACGG TGTACTAAAGGTATTTCGATTGTTGAAATTCAGTTCAAACCAACATGGTG GAGATTTTCTGACGATGGAACAAGCGGGGAATTACAAATTTGCCGACGGC GGAAAAACGGGGAATTATAATATTTTGCATTGCTTCTGCCGTCACGTGCA CGCTTTCGTTCTTCTATTGCCTGCAAGTACGGTACGTACTGCTGTATCGC CTGTCCCTTCGAACTACCGGTACACAGCGATGAAATTATTCATATGGTAT TCCGCTGAAGTATTTTTTTTAATATACATATGTTTTGGGGGGCAATATAT ATTTTACCGTATACACCGGAGTTTGTTTCTATTTTACTTTTTATGTTGTG GTAGGCATTACACCCCAGGAGTTAAAGGTGTGTGTTTGTTTTTTATTATT ATTTATTTTTTGTTTGTTGTGGCAGGCAATACGATTAATAATTGTACTGC TTTGCGGAGTATTTTCTTTTAACACGATTTCCTTTGTTTGCATACGCCCC AATTTTCGCACCAGGCAAGGAGAAGCTGCGGTACACCGTGGTGCTAGCTG TCCGGGGTGATGGACAGAAGGTGCGGCCGCGCATCATCTACAAGGGGAAC CCTTTCGTCGGGGGTACCAACAAGTCAGGCTCAGCCAAGAAGCCTGGCAA GAACAGCCTGTCGTACGAGCACCTCCCAGACAAGCGGACGAGCTTCGGCT ACCCGGCTGGCGGCATCAGCCTCGGGGTGCAGAAGTCGTCGTGGTGCGAC GGCACCCAGTCCGACGAGTGGGTAACCCAGGACTTCATGCGCCGCCCAGG GTCTACCTCCAGAGATCAGCGTCCCAGCGTTCTCGTGCTCGACGACTTCA GGTGCCACCGGGAAGAGAGGTTCCAAAAGAAGCTAATGGACCTGGCCAAG ACGCTGGTGGTGATGCTTGGTGGAGGGCTGACCCCGGTGTGCCAGCCGCT CGACCGGAACATCAACAAGGAGTTCAAGCGAGGTGTTCGGGCCAGGTACA CCAGCTGGATCCGGGACAACTACGGGCGCTCGGGGCAGAAGGTGACCGCG CCGAGCAGGGGGCTGGTCGCGACGTGGGTAAAGGAGGTGTGGGACAACAT CTCGGAGCGGACCATCCGCTCGTGCTTCAAGGTCTGCGGTCTCACCCTCA ACCTCGACGGAAGCGAGGACCACGCGTGGTGCATCTACACGTTCGGAGAC AACTACCGCGAGGTTCTTCGCGAGCAGCGCGAGGAGTGGGAGCAAGCGCA CGGCATCGGGCTCGAACCGCTCCAGCTACCGGTCATCCCTACCGGAGACG GCGTC
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Coding sequence (CDS) from alignment at P-littoralis_Contig650:104104..105808+

>mRNA_P-littoralis_Contig650.24.2 ID=mRNA_P-littoralis_Contig650.24.2|Name=mRNA_P-littoralis_Contig650.24.2|organism=Pylaiella littoralis U1_48|type=CDS|length=1011bp|location=Sequence derived from alignment at P-littoralis_Contig650:104104..105808+ (Pylaiella littoralis U1_48)
ATGGAAAAATTTCAGAAGCGTTTCAACGCCTGGTACTACAGGTTCCTCAA
GAGGCACCGGTTCTCGATCCGACGCAAGACGAGCGTGGGGCAGAAGAAGC
CGGAAGGATGGGAGGGCAAGGCGTGGGCATTCATCCAGAAGCTTCGCTCA
AGCCTGCGTGAGCACGCGCAGGAAGCCATCTTCGCCCTTCTGTACAACAT
GGACCAGACCCCGATCCAGGCTGAGATGCCGCCGGACACCACGGTGGAGA
AGACTGGTACGAAGAGCGCTTGCATCACGACAGGAGGTGAGACGGAGAAG
CTGCGGTACACCGTGGTGCTAGCTGTCCGGGGTGATGGACAGAAGGTGCG
GCCGCGCATCATCTACAAGGGGAACCCTTTCGTCGGGGGTACCAACAACT
TCGGCTACCCGGCTGGCGGCATCAGCCTCGGGGTGCAGAAGTCGTCGTGG
TGCGACGGCACCCAGTCCGACGAGTGGGTAACCCAGGACTTCATGCGCCG
CCCAGGGTCTACCTCCAGAGATCAGCGTCCCAGCGTTCTCGTGCTCGACG
ACTTCAGGTGCCACCGGGAAGAGAGGTTCCAAAAGAAGCTAATGGACCTG
GCCAAGACGCTGGTGGTGATGCTTGGTGGAGGGCTGACCCCGGTGTGCCA
GCCGCTCGACCGGAACATCAACAAGGAGTTCAAGCGAGGTGTTCGGGCCA
GGTACACCAGCTGGATCCGGGACAACTACGGGCGCTCGGGGCAGAAGGTG
ACCGCGCCGAGCAGGGGGCTGGTCGCGACGTGGGTAAAGGAGGTGTGGGA
CAACATCTCGGAGCGGACCATCCGCTCGTGCTTCAAGGTCTGCGGTCTCA
CCCTCAACCTCGACGGAAGCGAGGACCACGCGTGGTGCATCTACACGTTC
GGAGACAACTACCGCGAGGTTCTTCGCGAGCAGCGCGAGGAGTGGGAGCA
AGCGCACGGCATCGGGCTCGAACCGCTCCAGCTACCGGTCATCCCTACCG
GAGACGGCGTC
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