mRNA_P-littoralis_Contig65.51.1 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig65.51.1
Unique NamemRNA_P-littoralis_Contig65.51.1
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
BLAST of mRNA_P-littoralis_Contig65.51.1 vs. uniprot
Match: A0A6H5L7E1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L7E1_9PHAE)

HSP 1 Score: 120 bits (302), Expect = 3.080e-24
Identity = 142/437 (32.49%), Postives = 185/437 (42.33%), Query Frame = 3
Query:  126 SDSQDQNLTGLDGFEVEIFKVVRQEAASEQWKEWLRVPLEHAAAKQGQRGSLHEADGCWCRRQRR-------------LAGKQWANATRLRCTR*KREGGCCSAQRRRKA*P*RQVGWRRKESRHCMWQRHKVQTPWLRLSSCLLGQTLICDMWKNVVPSTLQLKRGIMWS*ESCC*KGHCPNEKTGDEEREETPLHLAAKEGHALWVSRLLLGGADIDSRNNKGLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNSCDSNGFTALHVAAGVDGSVRDNGGVVRFLLEAGADIEARTTDTY--TPLHITADCLKPSTSSGXXXXXXXXXXXXXXXXXXXXXXXXLACRRSNVAGVELLLRWGADEKTRGDDGCVAEHLMGV*ERYSDVWDDGRSQRHADDSRIRQMLA 1391
            S  ++++ + +DGF++EIFK+V++EA SEQWKEWLR PLEHAAAK+   GSLH ADG W  +  R             L G +  +A  +   R   +   C A     A P       R       W + ++ T    ++S +    +      + V  +L L R  +             + KT  +    TPLHLAA EG AL +S LLLG        N  L                                                                    +  A  VDG V DNG  VR LL  GAD+ A+TTD+   +PLH+  D  +   S G  XXXXXXXXXXXXXX        LACR S+V GVELLLRWGADEK     G     ++    R     D    +R ADD RI +M+A
Sbjct:    4 SKREEEDRSRVDGFKIEIFKLVQREATSEQWKEWLRAPLEHAAAKE--LGSLHTADGHWSEKMVRTLLTAGATDDANVLFGVEHESALHVVLARGAEDS--CRALMIAGADP-----TLRDRGDDTRWFK-EMDTRIFNMTSVIERIWVAAVAGHHRVIGSLLLNRADV-------------HAKTASQS---TPLHLAASEGRALCLSELLLGA-------NNHLEAVQELLAAGANCGLRCMLTNGSHSSLDMAAGRGHADVLTALLDKDN---------------------IFFAMSVDGPVHDNGDAVRALLGVGADVNAKTTDSICASPLHLAVD--RRIASDGMIXXXXXXXXXXXXXXGDDNKPLHLACRHSSVHGVELLLRWGADEKLTNSVGKTPADVI----RALQQGDLDDKEREADDQRIGRMVA 380          
BLAST of mRNA_P-littoralis_Contig65.51.1 vs. uniprot
Match: A0A6H5L812_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L812_9PHAE)

HSP 1 Score: 102 bits (253), Expect = 6.210e-19
Identity = 112/437 (25.63%), Postives = 161/437 (36.84%), Query Frame = 3
Query:  126 SDSQDQNLTGLDGFEVEIFKVVRQEAASEQWKEWLRVPLEHAAAKQGQRGSLHEADGCWCRRQRRLAGKQWANATRLRCTR*KREGGCCSAQRRRKA*P*RQVGWRRKESRHCMWQRHKVQTPWLRLSSCLLGQTLICDMWKNVVPSTLQLKRGIMWS*ESCC*KGHCPNEKTGDEEREETPLHLAAKEGHALWVSRLLLGGADIDSRNNKG---------------LXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNSCDSNGFTALHVAAGVDGSVRDNGGVVRFLLEAGADIEARTTDTYTPLHITADCLKPSTSSGXXXXXXXXXXXXXXXXXXXXXXXXLACRRSNVAGVELLLRWGADEKTRGDDGCVAEHLMGV*ERYSDVWDDGRSQRHADDSRIRQMLA 1391
            S  ++++ + LDGFE+EIFK+V++ A SEQWKEWLR P EHAAA+    G+L                      TRL       + G  +             GWR    R  +      ++  +  ++   G T   ++        L +              G  PN +   + R+ +PLHLAA  GH   V  LLL  A + ++                   +                                                          ++ D  G+ ALH AA +DG VRDNG  VR LL AGAD+ A+ T       +     +   S G                        +AC RS+  GVELLLRWGAD+K   + G    H++   ++  D  DD   +  AD+ RIR+MLA
Sbjct:    4 SKREEEDRSRLDGFEIEIFKLVQRGATSEQWKEWLRAPREHAAAE----GNLDFF-------------------TRLM------DAGANAG-----------AGWRGCNGRTLLGAAAFGRSEKMVRTTLTAGATDDVNVLFGGEREALMID-------------GADPNVR---DRRKRSPLHLAAVAGHHRVVGMLLLNRACVHAKTASQXXXXXXXXXXXXALCISELLLGANSHLEAVQELLAAGANYSLRTNGSRSPLEIAANRGQADVVKALLDKDSGEVDATDGGGWAALHYAASIDGPVRDNGDAVRVLLRAGADVSAKGTKDPCDTSLYLAVNRRIASDGTIRALLEGGANINARIGGDQTPLHVACSRSSAVGVELLLRWGADDKLTTNVGQTPAHVVRALQQ--DDLDD--EELEADNQRIRRMLA 380          
BLAST of mRNA_P-littoralis_Contig65.51.1 vs. uniprot
Match: D7FZ92_ECTSI (Pfs, NACHT and Ankyrin domain protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZ92_ECTSI)

HSP 1 Score: 97.8 bits (242), Expect = 8.350e-18
Identity = 166/446 (37.22%), Postives = 210/446 (47.09%), Query Frame = 3
Query:  135 QDQNLTGLDGFEVEIFKVVRQEAASEQWKEWLRVPLEHAAAKQGQRGSLH--------EADG-----CWCRRQRRLAGKQWANATRLRCTR*KREGGCCSAQRRRKA*P*RQVGWRRKESRHCMWQRHKVQTPWLRLSSCLLGQTLICDMWKNVVPSTLQLKRGIMWS*ESCC*KGHCPNEKTGDEEREETPLHLAAKEGH-----------------------------------ALWVSRLLLGGADIDSRNNKG-LXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNSCDSNGFTALHVAAGVDGSVRDNGGVVRFLLEAGADIEARTT-----DTYTPLHITADCLKPSTSSGXXXXXXXXXXXXXXXXXXXXXXXXLACRRSNVAGVELLLRWGADEKTRGDDGCVAEHLMGV 1310
            ++++ + +DGFE+EIFK+V++EA S+QWK+WLR PLEHAAAK    G+L          A G      W  R+R L G                    C                    ++  +  +  ++       +   G T    +   V        + +M +       G  PN    D +   +PLHLAA+ GH                                    L +S LL+GGAD D  + KG  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX                   ++ D  G+TALH AA VD SV DNG  VR LLEAGAD+  +T      D +TPLH+  +  +   S    XXXXXXXXXXXXXXX       +AC   NV+GVELLLRWGADE  +          +GV
Sbjct:    6 REEDRSRVDGFEIEIFKLVKEEATSKQWKQWLRTPLEHAAAK----GNLDLFTRLIDAGAGGEPGWQGWGHRERTLLG-----------------AAACG-------------------NKSDVMVQALLEAGETEFVNTSFGATRESALHVTVARGAEDASKALMMA-------GADPNLGNVDGD---SPLHLAAEAGHHRVIGILLLRKEAQSADPMNLFLETXXXXXXXXXXXLCISELLMGGADKDVTDGKGEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSRGNAAMLKAFLDKDSREVDATDGRGWTALHYAAYVDRSVHDNGDAVRALLEAGADVNVKTDAHASDDIFTPLHVAVN--RRMASICMIXXXXXXXXXXXXXXXCNQTPLHVACMWGNVSGVELLLRWGADEMLKNHRADTPADEIGV 399          
BLAST of mRNA_P-littoralis_Contig65.51.1 vs. uniprot
Match: D8LQI9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQI9_ECTSI)

HSP 1 Score: 92.4 bits (228), Expect = 8.310e-17
Identity = 63/154 (40.91%), Postives = 79/154 (51.30%), Query Frame = 3
Query:  948 DSNGFTALHVAAGVDGSVRDNGGVVRFLLEAGADI-EARTTDT-YTPLHITADCLKPSTSSGXXXXXXXXXXXXXXXXXXXXXXXXLACRRSNVAGVELLLRWGADEKTRGDDGCVAEHLMGV*ERYSDVWDDGRSQRHADDSRIRQMLASARA 1403
            D  G+ ALH AA VDG VRDNG  VR LL AGAD+ E    D+ +TPLHI  +  K   S G                        +AC+ ++V GVELLLRWGADEK   + G     ++    R +D   D   +R AD+ RIR+ML  A A
Sbjct:  114 DGEGWAALHYAAVVDGPVRDNGDAVRVLLGAGADVNETNNNDSCFTPLHIAVNGRK--VSDGTVRALLEGGSNIHARALLDQTPLHIACKHASVTGVELLLRWGADEKLTNNVGKTPADVIRP-RRQNDF--DDEEEREADNQRIRRMLEHAPA 262          
BLAST of mRNA_P-littoralis_Contig65.51.1 vs. uniprot
Match: A0A6H5JB39_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JB39_9PHAE)

HSP 1 Score: 87.8 bits (216), Expect = 1.340e-14
Identity = 115/252 (45.63%), Postives = 141/252 (55.95%), Query Frame = 3
Query:  663 ETPLHLAAKEGHALWVSRLLLGGADIDSRNNKGLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNSCDSNGFTALHVAAGVDGSVRDNGGVVRFLLEAGADIEAR-----TTDTYTPLHITADCLKPSTSSGXXXXXXXXXXXXXXXXXXXXXXXXLACRRSNVAGVELLLRWGADEKTRGDDGCVAEHLMGV*ERYSDVWDDGRSQRHADDSRIRQMLASARA 1403
            ETP  +AA  GH L +S LL+GGAD D  + KG                 XXXXXXXXXXXXXXXXXXXXXXXXXX                ++ D+ G+TALH AA  D  V DNG  VR LLEAGAD+  +     + D +TPLH+     +P  S    XXXXXXXXXXXXXXX       +AC   +++GVELLLRWGADE  + +       ++GV   + D  D    +  AD+ RIR +LA A A
Sbjct:  116 ETPRQIAAAMGHTLCISELLMGGADRDVDDGKG---------------ETXXXXXXXXXXXXXXXXXXXXXXXXXXLTMSYRSPLQAAASRVDATDNRGWTALHCAAYFDRPVHDNGDAVRALLEAGADVNVKNDAHVSDDIFTPLHVAVS--RPMASICTIXXXXXXXXXXXXXXXCNQTPLHVACMWGDLSGVELLLRWGADEMLKKNRVDTPADVIGV---WGDE-DRNDEEIEADNQRIRPVLARAAA 346          
BLAST of mRNA_P-littoralis_Contig65.51.1 vs. uniprot
Match: D8LD22_ECTSI (MHC_I C-terminus family protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LD22_ECTSI)

HSP 1 Score: 87.0 bits (214), Expect = 5.860e-14
Identity = 64/158 (40.51%), Postives = 74/158 (46.84%), Query Frame = 3
Query:  939 NSCDSNGFTALHVAAGVDGSVRDNGGVVRFLLEAGADIEARTTDTY---TPLHITADCLKPSTSSGXXXXXXXXXXXXXXXXXXXXXXXXLACRRSNVAGVELLLRWGADEKTRGDDGCVAEHLMGV*ERYSDVWDDGRSQRHADDSRIRQMLASARA 1403
            N+ D  G+TALH AA ++   RD G  VR LL AGAD+ A+TTD +    PLHI      PST  G                         AC  S+VA VELLLRWGADEK   D       ++G      DV  D      AD  RI QMLA A A
Sbjct:  271 NATDHYGYTALHHAALIEVHGRDKGDAVRVLLAAGADVHAKTTDDHLRCAPLHIAVCGRVPST--GTIRALLEGGADVNVRDIEDRTPLHEACTYSSVAAVELLLRWGADEKLTDDGDVTPADMIGT---SGDVGSD-HGDIEADGQRIHQMLARAPA 422          
BLAST of mRNA_P-littoralis_Contig65.51.1 vs. uniprot
Match: D8LQN0_ECTSI (Ankyrin repeat protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQN0_ECTSI)

HSP 1 Score: 83.6 bits (205), Expect = 6.470e-13
Identity = 58/151 (38.41%), Postives = 79/151 (52.32%), Query Frame = 3
Query:  957 GFTALHVAAGVDGSVRDNGGVVRFLLEAGADIEARTTDTY--TPLHITADCLKPSTSSGXXXXXXXXXXXXXXXXXXXXXXXXLACRRSNVAGVELLLRWGADEKTRGDDGCVAEHLMGV*ERYSDVWDDGRSQRHADDSRIRQMLASARA 1403
            G+ ALH  A  D +VRD G  VR LL AGAD+  + T+    TPLH+  +  +  TS+G                        +AC R   + VELLLRWGADEK   +DG     ++GV E+ +D+ D+   +R AD+ RI +MLA A A
Sbjct:  279 GWAALHYVASFDETVRDKGDAVRVLLGAGADVNVKGTNDSCATPLHLAVN--RWMTSTGTICALLEGGANINARTAGDDTPLHIACTRLRGSVVELLLRWGADEKLPNNDGDTPADVVGVLEQ-NDLDDE---EREADNQRIHRMLARAPA 423          
BLAST of mRNA_P-littoralis_Contig65.51.1 vs. uniprot
Match: D8LB27_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LB27_ECTSI)

HSP 1 Score: 82.4 bits (202), Expect = 1.460e-12
Identity = 61/155 (39.35%), Postives = 75/155 (48.39%), Query Frame = 3
Query:  948 DSNGFTALHVAAGVDGSVRDNGGVVRFLLEAGADIEARTTDTY---TPLHITADCLKPSTSSGXXXXXXXXXXXXXXXXXXXXXXXXLACRRSNVAGVELLLRWGADEKTRGDDGCVAEHLMGV*ERYSDVWDDGRSQRHADDSRIRQMLASARA 1403
            D  G+TA+H A    G + DNG VVR LLEAG  + A T   +   TPLH   +  +   S                          +AC  SNVA VELLLRWGADE    D+G V   ++GV +R  DV D+      AD  RIR+MLA A A
Sbjct:  273 DDQGYTAIHCAVNRHGPL-DNGAVVRLLLEAGGGVNAETGRDFLRWTPLHFAVE--RRIASIDTTLALLEGGANTNAHGDHSGTPLHVACMHSNVAAVELLLRWGADETCSNDNGDVPADVIGVYDR-GDVNDEDVK---ADHKRIRRMLARAPA 420          
BLAST of mRNA_P-littoralis_Contig65.51.1 vs. uniprot
Match: A0A6H5JXF0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JXF0_9PHAE)

HSP 1 Score: 76.6 bits (187), Expect = 1.450e-11
Identity = 53/157 (33.76%), Postives = 75/157 (47.77%), Query Frame = 3
Query:  939 NSCDSNGFTALHVAAGVDGSVRDNGGVVRFLLEAGADIEARTT--DTYTPLHITADCLKPSTSSGXXXXXXXXXXXXXXXXXXXXXXXXLACRRSNVAGVELLLRWGADEKTRGDDGCVAEHLMGV*ERYSDVWDDGRSQRHADDSRIRQMLASARA 1403
            N+ +  G  ALH AA V G V D G  VR LL AG D+   TT    +TPLH+  D      +S                         +AC+ ++V+GVELLLRWGADE+   + G +   ++    +  D+ D+   +  AD+ RI +ML  A A
Sbjct:   36 NATNDLGLAALHYAASVVGPVHDKGDAVRVLLGAGVDVNVNTTTDSCFTPLHVAVD---GRIASDGTIRALLEGADVDSRARHDQTPLHIACKHASVSGVELLLRWGADEQLTNNRGDMPADVIRA-RQQGDLDDE---EHDADNQRICRMLTRAPA 185          
BLAST of mRNA_P-littoralis_Contig65.51.1 vs. uniprot
Match: A0A6H5KVD2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KVD2_9PHAE)

HSP 1 Score: 72.0 bits (175), Expect = 4.230e-11
Identity = 61/120 (50.83%), Postives = 72/120 (60.00%), Query Frame = 3
Query:  951 SNGFTALHVAAGVDGSVRDNGGVVRFLLEAGADIEARTTD-TYTPLHITADCLKPSTSSGXXXXXXXXXXXXXXXXXXXXXXXXLACRRSNVAGVELLLRWGADEKTRGDDGCVAEHLMG 1307
            +N  TALH AA       D G  VR LLEAGADIEA+T D + TP+H++A C + STS G   XXXXXXXXXX           LAC +S+V  VELLLRWGA+EK     G  A   +G
Sbjct:   25 NNWKTALHHAAEPSRRGSDKGNAVRVLLEAGADIEAKTKDCSSTPVHLSA-CSRSSTS-GAILXXXXXXXXXXAEEVDRCPPLHLACAKSSVPAVELLLRWGANEKLVDSLGQTAADTLG 142          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig65.51.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 24
Match NameE-valueIdentityDescription
A0A6H5L7E1_9PHAE3.080e-2432.49Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5L812_9PHAE6.210e-1925.63Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FZ92_ECTSI8.350e-1837.22Pfs, NACHT and Ankyrin domain protein n=1 Tax=Ecto... [more]
D8LQI9_ECTSI8.310e-1740.91Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JB39_9PHAE1.340e-1445.63Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LD22_ECTSI5.860e-1440.51MHC_I C-terminus family protein n=1 Tax=Ectocarpus... [more]
D8LQN0_ECTSI6.470e-1338.41Ankyrin repeat protein n=2 Tax=Ectocarpus siliculo... [more]
D8LB27_ECTSI1.460e-1239.35Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JXF0_9PHAE1.450e-1133.76Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KVD2_9PHAE4.230e-1150.83Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig65contigP-littoralis_Contig65:194206..198644 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D8LQM9
PFAMsAnk,Ank_2,Ank_3,Ank_4,Ank_5,Motile_Sperm
Model size2795
Max annot lvl2759|Eukaryota
KEGG koko:K21440
Hectar predicted targeting categoryother localisation
GOsGO:0001508,GO:0002027,GO:0002262,GO:0002376,GO:0002520,GO:0003008,GO:0003012,GO:0003013,GO:0003015,GO:0003205,GO:0003230,GO:0003279,GO:0003283,GO:0003674,GO:0005198,GO:0005200,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005783,GO:0005829,GO:0005856,GO:0005886,GO:0005911,GO:0005938,GO:0006725,GO:0006778,GO:0006779,GO:0006807,GO:0006810,GO:0006811,GO:0006812,GO:0006816,GO:0006873,GO:0006874,GO:0006875,GO:0006887,GO:0006888,GO:0006928,GO:0006936,GO:0006937,GO:0006941,GO:0006942,GO:0006996,GO:0007009,GO:0007010,GO:0007154,GO:0007163,GO:0007165,GO:0007267,GO:0007275,GO:0007507,GO:0008015,GO:0008016,GO:0008092,GO:0008093,GO:0008104,GO:0008150,GO:0008152,GO:0009058,GO:0009893,GO:0009987,GO:0010256,GO:0010468,GO:0010522,GO:0010604,GO:0010628,GO:0010638,GO:0010646,GO:0010880,GO:0010881,GO:0010882,GO:0010959,GO:0012505,GO:0014704,GO:0014731,GO:0015672,GO:0016020,GO:0016043,GO:0016192,GO:0016323,GO:0016528,GO:0016529,GO:0018130,GO:0019222,GO:0019438,GO:0019722,GO:0019725,GO:0019899,GO:0019900,GO:0019901,GO:0019932,GO:0022898,GO:0023051,GO:0023052,GO:0030001,GO:0030003,GO:0030011,GO:0030016,GO:0030017,GO:0030018,GO:0030029,GO:0030048,GO:0030054,GO:0030097,GO:0030099,GO:0030154,GO:0030218,GO:0030315,GO:0030424,GO:0030507,GO:0030673,GO:0030674,GO:0030863,GO:0031252,GO:0031253,GO:0031256,GO:0031430,GO:0031647,GO:0031672,GO:0031674,GO:0032409,GO:0032411,GO:0032412,GO:0032414,GO:0032501,GO:0032502,GO:0032589,GO:0032879,GO:0032940,GO:0032970,GO:0033013,GO:0033014,GO:0033036,GO:0033043,GO:0033267,GO:0033292,GO:0033365,GO:0034101,GO:0034394,GO:0034613,GO:0034641,GO:0034762,GO:0034764,GO:0034765,GO:0034767,GO:0035088,GO:0035090,GO:0035556,GO:0035637,GO:0036309,GO:0036371,GO:0042383,GO:0042391,GO:0042592,GO:0042692,GO:0042995,GO:0043005,GO:0043034,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043266,GO:0043268,GO:0043269,GO:0043270,GO:0043292,GO:0044057,GO:0044093,GO:0044237,GO:0044249,GO:0044271,GO:0044291,GO:0044304,GO:0044325,GO:0044422,GO:0044424,GO:0044425,GO:0044444,GO:0044448,GO:0044449,GO:0044456,GO:0044459,GO:0044463,GO:0044464,GO:0045197,GO:0045199,GO:0045202,GO:0045211,GO:0046483,GO:0046903,GO:0046907,GO:0048193,GO:0048468,GO:0048513,GO:0048518,GO:0048522,GO:0048534,GO:0048731,GO:0048821,GO:0048856,GO:0048869,GO:0048872,GO:0048878,GO:0050789,GO:0050794,GO:0050801,GO:0050821,GO:0050896,GO:0051049,GO:0051050,GO:0051117,GO:0051128,GO:0051130,GO:0051179,GO:0051186,GO:0051188,GO:0051234,GO:0051239,GO:0051270,GO:0051279,GO:0051282,GO:0051641,GO:0051649,GO:0051716,GO:0051899,GO:0051924,GO:0051928,GO:0055001,GO:0055065,GO:0055072,GO:0055074,GO:0055076,GO:0055080,GO:0055082,GO:0055117,GO:0060047,GO:0060048,GO:0060090,GO:0060255,GO:0060306,GO:0060307,GO:0060341,GO:0061024,GO:0061061,GO:0061245,GO:0061337,GO:0061515,GO:0065007,GO:0065008,GO:0065009,GO:0070252,GO:0070296,GO:0070727,GO:0070838,GO:0070972,GO:0071704,GO:0071840,GO:0071944,GO:0072359,GO:0072503,GO:0072507,GO:0072511,GO:0072657,GO:0072659,GO:0086001,GO:0086002,GO:0086003,GO:0086004,GO:0086005,GO:0086010,GO:0086012,GO:0086014,GO:0086015,GO:0086018,GO:0086019,GO:0086026,GO:0086046,GO:0086065,GO:0086066,GO:0086070,GO:0086091,GO:0090257,GO:0097060,GO:0097458,GO:0098590,GO:0098771,GO:0098794,GO:0098900,GO:0098901,GO:0098907,GO:0098910,GO:0099080,GO:0099081,GO:0099512,GO:0099568,GO:0099623,GO:0120025,GO:0120038,GO:1901016,GO:1901018,GO:1901019,GO:1901021,GO:1901360,GO:1901362,GO:1901379,GO:1901381,GO:1901564,GO:1901566,GO:1901576,GO:1903115,GO:1903169,GO:1903522,GO:1903779,GO:1904062,GO:1904064,GO:1904427,GO:1990778,GO:2001257,GO:2001259
Exons2
Evalue8.48e-22
EggNOG OGsCOG0666@1|root,KOG4177@2759|Eukaryota
Descriptionspectrin binding
Cds size507
COG categoryI
BRITEko00000,ko04131
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791354.5877166-UTR-P-littoralis_Contig65:194205..1950111680791354.5877166-UTR-P-littoralis_Contig65:194205..195011Pylaiella littoralis U1_48UTRP-littoralis_Contig65 194206..195011 +
1680791354.6141756-UTR-P-littoralis_Contig65:195518..1958181680791354.6141756-UTR-P-littoralis_Contig65:195518..195818Pylaiella littoralis U1_48UTRP-littoralis_Contig65 195519..195818 +
1680791354.6237583-UTR-P-littoralis_Contig65:197462..1986441680791354.6237583-UTR-P-littoralis_Contig65:197462..198644Pylaiella littoralis U1_48UTRP-littoralis_Contig65 197463..198644 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791354.6051228-CDS-P-littoralis_Contig65:195011..1955181680791354.6051228-CDS-P-littoralis_Contig65:195011..195518Pylaiella littoralis U1_48CDSP-littoralis_Contig65 195012..195518 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig65.51.1prot_P-littoralis_Contig65.51.1Pylaiella littoralis U1_48polypeptideP-littoralis_Contig65 195012..195518 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig65.51.1

>prot_P-littoralis_Contig65.51.1 ID=prot_P-littoralis_Contig65.51.1|Name=mRNA_P-littoralis_Contig65.51.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=169bp
MEELLAAGANVDVRDLKEWSMLDTAATEGREDVMKVLLRHGGDTNSCDSN
GFTALHVAAGVDGSVRDNGGVVRFLLEAGADIEARTTDTYTPLHITADCL
KPSTSSGVMCALLEGGADTSASSRFEWTSLHLACRRSNVAGVELLLRWGA
DEKTRGDDGCVAEHLMGV*
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mRNA from alignment at P-littoralis_Contig65:194206..198644+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig65.51.1 ID=mRNA_P-littoralis_Contig65.51.1|Name=mRNA_P-littoralis_Contig65.51.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=4439bp|location=Sequence derived from alignment at P-littoralis_Contig65:194206..198644+ (Pylaiella littoralis U1_48)
GCCGTGTGATATTAGTATTTCACACCTTTCTAGCGGAATACCAACACACC CGCACCGTGACAGGACAAAGCAAGACAGACCTCGTGACCTAAGGAAACGT GGTGGAAGTGCGGGAGGGCAATATGTCAGACTCCCAGGACCAAAACCTCA CAGGCCTTGACGGATTCGAGGTCGAGATTTTCAAAGTCGTCCGGCAGGAG GCGGCCTCGGAGCAGTGGAAGGAGTGGCTTCGCGTGCCGCTCGAGCATGC CGCGGCCAAGCAAGGGCAACGTGGGTCTCTTCACGAGGCTGATGGATGCT GGTGCCGACGACAGCGCAGGCTGGCGGGGAAACAGTGGGCGAACGCTACT CGGTTGCGCTGCACACGGTAGAAGCGAGAAGGTGGTTGTTGCTCTGCTCA ACGCCGGCGCAAAGCCTGACCTTGACGTCAAGTTGGTTGGAGGCGAAAAG AGAGTCGGCACTGCATGTGGCAGCGGCACAAGGTGCAGACGCCGTGGCTG CGGCTCTCATCATGCTTGCTGGGGCAGACATTAATTTGCGATATGTGGAA AAACGTAGTACCCTCGACGTTGCAGCTAAAGCGGGGCATCATGTGGTCGT GAGAGAGTTGCTGCTAAAAGGGGCACTGCCCTAATGAGAAGACCGGGGAC GAGGAGCGGGAGGAGACGCCTCTCCATCTGGCTGCGAAGGAGGGCCATGC GCTTTGGGTGTCCAGGCTTTTGCTGGGCGGTGCAGACATCGACTCGCGCA ACAACAAGGGCCTAACCCCACTTCACCTGGCAGCCGAGGGCAACAAGCTC TGCGCGATGGAAGAGCTCTTGGCCGCTGGTGCCAATGTTGACGTTCGTGA TTTGAAGGAATGGTCAATGCTTGACACTGCTGCGACCGAGGGGCGAGAGG ACGTCATGAAAGTGCTTCTGCGGCATGGGGGTGACACTAACTCCTGCGAC AGTAACGGCTTTACAGCTCTGCATGTTGCCGCTGGAGTAGATGGTTCAGT TCGGGACAACGGCGGCGTCGTCCGTTTTTTGCTCGAAGCTGGAGCTGACA TCGAAGCGAGGACGACCGACACCTACACACCCTTGCACATCACCGCCGAC TGCCTGAAACCCTCCACGAGTAGTGGCGTCATGTGTGCCCTTTTGGAGGG AGGGGCTGACACCAGTGCGTCGAGCAGATTCGAGTGGACGTCGCTTCATC TAGCTTGCCGCCGCTCCAACGTGGCTGGTGTGGAGCTCCTGCTGCGATGG GGAGCAGACGAGAAAACCAGAGGCGATGATGGATGCGTGGCGGAACACCT CATGGGAGTTTGAGAAAGATACAGCGATGTCTGGGACGACGGCCGGAGCC AACGTCACGCGGACGACAGTCGCATTCGCCAAATGTTGGCGAGCGCCCGG GCTTGCTTTACCGTTCTTACCCGACCAGGATGAAGCTCGTGACGAATAGA AGTAGAGACAGTTTTTGCGCCAAGGTGTCAAAGGCCGGCTGTGATTCAAG ACGGGGTGGCGACAACACTAGTAACCAAACGATCGGCGTGGGCTAACTGG TGGGGAGGGTGGTTGGCCTGGAGACAGAGGACGTTTTCCGCTTGGTGGTG GGCTTCCTTTGAGGTACGAAGAGACTTTCATAGAGCCATTTCCAGGGATA GCGATCACACCGTCGGTATTGTATGTCTGCAGTAGAACGGGTCCCGTTCC GAGCATCTTGTGATGCTGTACAGCAGTACGTGGCGAAGGACCGCTCGTTT CAACGTTGCTTCGCACGCATTCATCGGTTTAGGGTGAGGGCACCATATCA TCAGCTCTCACGCGAATCGATCTGTTTTCATTTTGTGAAACACCGCGATT ACATCTTTTTTGAGTTTATTTTTGCCAGTGAGATCAAAAATGGCATCCCT TTCTGCAACGCTAATACTATACATGAGCTATCATACGGTATGTGCTGTCC GAATAAGAAATACAGGCCCGTAATATCGGACAGCAGATCCTTTTTCCGTG CATCGTGTAATATAGGGTTTGATTCAGCTGTTATTGTCTTGTCCATGGTA AAGGTCGCGCTGTCTCATGTTCTTGACCACCTTCAGCCCTTGCCGGTTGT AACCTACACCATAAGTGACACGAGAAACCACACATCCGATGGTAATATTT TCAGATATTTTTGTGCCAGTTACGTGAGGCCGAAGTATCACCCGGGTTGC ATGCAATGCCACACCTCCTGGGGTTGCGCCGCCGACAACAACGCGGCCCC TGCCTCATCACCCCGGTGATAATCGGTGGGCGAGACCACACACACCAGGC AATGCACACAACACACCACTCCGAGTGCGGGAAACTACACCTTGTGGCAA CCACATCAACATGGACGTGCAGGGAGTAGCCCCCCTCTTGAAGCACCTCC CCTGCAGGCACCTCCGCTACTTCGACGGCAGCGATGCAGGCTCGACGGAT CACGTCTTCTTTTGAACCGAAAAACATTCACGACACCGGCTTCTGCTGGG ACTCGCACAGCAATGTGGAAGCCACCGCACCCGCTCAGCAGCCTGCTGCA GCCCCACCGGCAGCAGCTCGCGCCAGCGCAGTGCAGGGCGAAGAGTGCAC AAGTCAAGAGAGCTTCCTCCGCCAACGCGGAGCCATTATCTACAAGCAGT ATACCACCCTCGCTGTCATAAAACCCCCTGTTGAACACACCTCATGCTGG TTCGGCAACAATTATCCGTTTCAGGCGGTGTTCTTGTAACCCCATGTTAT CATACAACCCCCATGGCTTCCGCGACCTACTTGTATCATCCGGGTTACAT GCGCAACCACTTCACACCCGATGACAATATTTTCAACACCAAAATCTCAT CACCGGGGTGTGTTTTTTATGTATTTTACGGTAGGAGCACAAGGCTCACC GTCGAGAGGTGGGGTATTGGGATGCATCAGGCATACGAAGTACAGCTGTA GTGATTATTCGGCAAGCGTCAGTCGTGGGTGCGCCAACTGGAATCCAACA TAAGCCTTTTCAGCCGTGCGTATCACTTAGAGTTCCTGATGTTCAATGCT GCGGTGCCGTGGCTGCAATAGTTGCGATACTTGGCCGTCAGGGTTGCGGT TCCCACTCCGACTGTTGTTTTCCCTGAGCGGAGGCGTAGCGCGTTCGTAT GTCCTCCTTCCATCCAACAAATAAGGAAGTATGTCCCGTTCGGCAAGTTT TGACCAAGCGCGTGATTCTGCGATACTTTCACCGCCACCGTCGTCGTCCT GCCTCAGGTTTCAAGTGCAGAGAATTGTCGGAGCACTGTCTACCATTCGT GAACTAGAGCTGCCAACTAAAACGGTTCGACGGTGCCGGTAGCAGGCCAA GTATTGGTGCCGAATCTAGCGTATCAACCAACCGGAAAGTCGAAAGGGCT GAACCTTGGAGTGTCGCTTGGCTGTAAGTGTGTACAGCAGTGTTCCCATG AGAGTGTTTCTGAGAAACGTTTTGATGGCCCGGGTAGAGCTGCGTGCATT GACACTTGAGTCGGTAGTAGTGTGCGAGTTTGGCAGGTCGTTTCAATTAC TGTACAGCAAGCGCAAGTGGAAGCATCACTCAGCACCTCACAGGGTTGGT CTTGCGAAAAAGTTAGCATGGATGCTTGAGCAGTAGGACGTACAGCGTCA GCGTTTCTTAGTGATGTTTTCTGTAGCCTGAACAAATCTACCACCCGCTA TGGCGTACAGTATCATAGCACCGTTCTTTGTTTTGTGTTCTCGATGGTTG AGTTGGCACCGGCACATCACCTCGAACTTGGGCTTTGCTTCTGTCGTAAG TGCTTACCCTTTGTGATTTCCTTCTTGAGGTTTGAGCTGGTTTTGTCATG TTGGCGTTGATCTATCCGACTACCCGAGCGCACCCGCAGGTATCCTTGGT CGGTTTTTCAAGTTGGCCATAGCATTTCTGTAACGACGAGATCATGAACT GTTGTTGGTTCCGTTGTGTTTTGCCCGCGCACGCGTCCTACGTCGAAGAG AGCAGAAGTATCGGTCTGCAAATGCTAGCGAAAAAAAAACGGGTCTTATT TCATGTCGGCGGCCGACCGATAATGGAAATTTTTCAGAGCTTTTAGGTTG TGTTGTGATGGTAGTTTTCCTTACGGCATCGGGGCGTATCCGTCGATCGT ATCGGGTACACATCCATGAACTTCGTCGATTCCTCCCGGGACCGAGTAGG GATGTACTGTAATCTGCGGAATGTTGTCAGCAAAATTTTGTTTTTCCCCA GGGGATCGCGATTTTATTAAACACTCCCAGTTCGCCCAAGTATTTTCTTG GTTTTTCGTCGAAACGCAAAGCAACGTGTCGAATTCCATTTGTTGAGGCG ATGGAATTGCTATTGTTATCGTGCATCGTAACTGGTCAACTGCATGCATT TTTTCATCTTTGCTAGTGCAGTTACCTGTTTCTTTCTCA
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Coding sequence (CDS) from alignment at P-littoralis_Contig65:194206..198644+

>mRNA_P-littoralis_Contig65.51.1 ID=mRNA_P-littoralis_Contig65.51.1|Name=mRNA_P-littoralis_Contig65.51.1|organism=Pylaiella littoralis U1_48|type=CDS|length=507bp|location=Sequence derived from alignment at P-littoralis_Contig65:194206..198644+ (Pylaiella littoralis U1_48)
ATGGAAGAGCTCTTGGCCGCTGGTGCCAATGTTGACGTTCGTGATTTGAA
GGAATGGTCAATGCTTGACACTGCTGCGACCGAGGGGCGAGAGGACGTCA
TGAAAGTGCTTCTGCGGCATGGGGGTGACACTAACTCCTGCGACAGTAAC
GGCTTTACAGCTCTGCATGTTGCCGCTGGAGTAGATGGTTCAGTTCGGGA
CAACGGCGGCGTCGTCCGTTTTTTGCTCGAAGCTGGAGCTGACATCGAAG
CGAGGACGACCGACACCTACACACCCTTGCACATCACCGCCGACTGCCTG
AAACCCTCCACGAGTAGTGGCGTCATGTGTGCCCTTTTGGAGGGAGGGGC
TGACACCAGTGCGTCGAGCAGATTCGAGTGGACGTCGCTTCATCTAGCTT
GCCGCCGCTCCAACGTGGCTGGTGTGGAGCTCCTGCTGCGATGGGGAGCA
GACGAGAAAACCAGAGGCGATGATGGATGCGTGGCGGAACACCTCATGGG
AGTTTGA
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