mRNA_P-littoralis_Contig65.109.1 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig65.109.1
Unique NamemRNA_P-littoralis_Contig65.109.1
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
BLAST of mRNA_P-littoralis_Contig65.109.1 vs. uniprot
Match: D8LQI0_ECTSI (JmjC domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LQI0_ECTSI)

HSP 1 Score: 514 bits (1324), Expect = 3.020e-174
Identity = 253/347 (72.91%), Postives = 283/347 (81.56%), Query Frame = 1
Query:  226 APLERIDVSGLSPSQVSEVVDFSRPCILTGALVIPECEAWCDALLEDLGEETCAFQIRDNNTGRSGVFEASLVDFVRGLQEESTHEESWYLLEEDLLGLSQARPELGALLAKSQDLLGMDEFELFPASVRPKNLCAIIGGVGARSFLHSDPMEWMGWNVLLEGRKSWTFLPPLPELDAPLGTYRLAPNAFGSHNISAGWQSDVDLYQRGATAXXXXXXXXXXXXXXXXCCASWPKEGEGHEVMQHAVSGVQEVGDLVLIPPRHWHQVYHLEPSVAVASQFMDQRVRHRVFRHILDWCGAASPSSEDFMFSSDFDALTPADQIREVLRAALVARYGREKGLEAFTSLE 1266
            A L RIDV+GLS +QV+++VDFSRPCILTG L  P+CE+WCD LL+DLGEETCAFQIRDN +GRS VFEASL+DFV+ LQ+ESTH ESWYLL+E LL   QARPELGALL K QDLLG DEF+LFP SVRP+NLC I+GGVGARSFLHSDPMEWMGWNVLLEGRK WTFLPPL +LD+ LGTYRLAPNAFGSHN+SAGWQS+VDLYQ GA                    ASWP  GEG EVMQHAVSGVQE G+LVLIPPRHWHQVYHLEPS+AVASQ+MD RVR RVFRH+LDWCGA    S+D + SS FDAL   DQI+EVL+ ALVAR+G EKGLEAF  L+
Sbjct:   82 ASLPRIDVTGLSRAQVADLVDFSRPCILTGVLSSPDCESWCDGLLQDLGEETCAFQIRDNESGRSEVFEASLMDFVKRLQDESTHNESWYLLDEHLLDFPQARPELGALLEKPQDLLGTDEFQLFPPSVRPQNLCTIVGGVGARSFLHSDPMEWMGWNVLLEGRKLWTFLPPLADLDSSLGTYRLAPNAFGSHNVSAGWQSNVDLYQHGAAT------------------ASWPTAGEGQEVMQHAVSGVQEAGELVLIPPRHWHQVYHLEPSLAVASQYMDFRVRDRVFRHMLDWCGA----SDDVLLSSRFDALALRDQIKEVLKVALVARHGGEKGLEAFDGLD 406          
BLAST of mRNA_P-littoralis_Contig65.109.1 vs. uniprot
Match: A0A7S2R9P6_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2R9P6_9STRA)

HSP 1 Score: 207 bits (526), Expect = 1.350e-55
Identity = 136/378 (35.98%), Postives = 184/378 (48.68%), Query Frame = 1
Query:  238 RIDVSGLSPSQVSEVVDFSRPCILTGAL--------VIPECEAWCDALLEDLGEETCAFQIRDNNTGRSGVFEASLVDFVRGLQEESTHEESWYLLEEDLLGLSQARPELGALLAKSQDLLGMDEFELFPASVRPKNLCAIIGGVGARSFLHSDPMEWMGWNVLLEGRKSWTFLPPLPELDAPLGTYRLAPNAF--GSHNISAGWQSDVDLYQ-----RGATAXXXXXXXXXXXXXXXXCCASWPKEG--------------------EGHEVMQHAVSGVQEVGDLVLIPPRHWHQVYHLEPSVAVASQFMDQRVRHRVFRHILDWCGAA-SPSSEDFMFSSDFDALTPADQIREVLRAALVARYGREKGLEAFTSL 1263
            + DV    P Q    VD  R  ++  AL             EAW  A  E   +E      +D+ TG +   + SL  FV  L  +S H+ S+YLL+E LL    + P L + L   +   G D F LFPA ++PK  C ++GG G+RS LH+DPMEW GWN LLEG K WTFLPP    +  LG+ R+    +  G +NISAGWQSDVDLY      +G +                   A    EG                    +G  +    ++ +Q  GDLV IPP  WHQ YHLEPSVAVA Q++  +   +V  H+  WC A+   +   F   +D +    A  I+E+L  AL A++G+ KG E F+SL
Sbjct:   76 QFDVVTGRPEQFRSEVDGRRVGVIKNALWGDMGAARSAEAMEAWTAAFFEAFAQERVTCHTKDSTTGETTALDLSLSHFV-DLAFKSNHQHSYYLLDESLLS---SAPSLASSLTLPEAWFGKDHFGLFPAELQPKQPCLVMGGAGSRSSLHADPMEWTGWNYLLEGSKLWTFLPPGKGTETALGSRRVLSGEWDGGKYNISAGWQSDVDLYMEKIAGKGRSGDWPSAAALGVMPSIARDYALGLVEGSCNTGHPFMPSNAMVLDALVDGRSLEDGRIAVLQREGDLVHIPPGWWHQTYHLEPSVAVAGQYLSSQNFQKVAAHVCKWCDASIGDAGSHFQQVADTEGYETA--IQELLLLALRAQHGQAKGDELFSSL 447          
BLAST of mRNA_P-littoralis_Contig65.109.1 vs. uniprot
Match: W7TWL4_9STRA (F-box protein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TWL4_9STRA)

HSP 1 Score: 160 bits (406), Expect = 1.630e-39
Identity = 123/382 (32.20%), Postives = 173/382 (45.29%), Query Frame = 1
Query:  241 IDVSGLSPSQVSEVVDFSRPCILTGAL-VIPEC-----EAWCDALLEDLGEETCAFQIRDNNT-GRSGVFEASLVDFVRGLQEESTHEESWYLLEEDLLGLSQARPELGALLAKSQDLLG-MDEFELFPASVRPKNLCAIIGGVGARSFLHSDPMEWMGWNVLLEGRKSWTFLPPLPELDAPLGTYRLAPNAFGSHNISAGWQS-DVDLYQRGATAXXXXXXXXXXXXXXXXCCASWPKEGEGHEVMQHAVSGVQEVGDLVLIPPRHWHQVYHLEPSVAVASQFMDQRVRHRVFRHILDWC----------------------GAASPSSEDFMFSSDF---DALTPADQ-------IREVLRAALVARYGREKGLEAFTSL 1263
            +D   L   Q  +      PC+LT A    P       + + D   E+  +     Q++ N+   +  ++  +L   V G+ ++STHEE+WYLL E LL  SQ R ++         L G +D F+LFP  +RPK  C I+GG GARSFLH DP EW G N LLEGRK WTF PP     A LG  R+ P A+    +SAGW+S D DLY +                           + EG + +      VQE G+LV+IPP   HQVYHL+P +++A Q  +      V  H+L W                       G    + E      +    D     D+       I + LR A++ R+G E+GL+A+  L
Sbjct:   36 LDARDLPSQQALDAYIKKGPCVLTHAFDKDPNTRKMADDTFSDTFFEEFQDVELEVQLKRNSKIAKPRLYSGTLAGIVDGMMQKSTHEEAWYLLNEKLLEDSQNR-KIKDPFRLPPSLFGKLDYFDLFPQRIRPKKHCLILGGTGARSFLHVDPFEWTGVNYLLEGRKIWTFFPPC---SADLGLKRVLPEAWEGE-VSAGWKSTDFDLYYKVPEIFEGAVTLDLPEVLA---------DVEGVQAL------VQEEGELVVIPPGWAHQVYHLKPGLSLAWQVCNHGNLKNVIMHMLTWAIESGGNLRHAQERPLHGGKAGLGQMEGTQEHVTRMVEIICQDTTEGVDERHQVMATIEKALRQAMILRHGPERGLQAYERL 397          
BLAST of mRNA_P-littoralis_Contig65.109.1 vs. uniprot
Match: L1JM62_GUITC (Uncharacterized protein n=1 Tax=Guillardia theta (strain CCMP2712) TaxID=905079 RepID=L1JM62_GUITC)

HSP 1 Score: 140 bits (353), Expect = 2.610e-32
Identity = 103/330 (31.21%), Postives = 158/330 (47.88%), Query Frame = 1
Query:  232 LERIDVSGLSPSQVSEVVDF--SRPCILTGALVI--PECEAWCDALLEDLGEETCAFQIRDNNTGRSGVFEASLVDFVRGLQEESTHEESWYLLEEDLLGLSQARPELGALLAKSQDLLGMDEFELFPASVRPKNLCAIIGGVGARSFLHSDPMEWMGWNVLLEGRKSWTFLPP---------------LPELDAP-LGTYRLAPNAFGSHN-------ISAGWQSDVDLYQRGATAXXXXXXXXXXXXXXXXCCASWPKEGEGHEVMQHAVSGVQEVGDLVLIPPRHWHQVYHLEPSVAVASQFMDQRVRHRVFRHILDWCGAASPSSE 1140
            ++ +D+  +SPS    + D    RP +L  A+ +   E E+WC+ L+ ++      FQ R    G + +   S  DF+  +  +S H++ ++L +E LL   + +  L   ++  QD    + FELFP S+RPK+ C +IGGVG+RS LH+DP +WMGWN  LEG K WTFLPP               L  L+A    +YRL PNA+ + +       ++AGWQSD DLY+                         W +        Q++   +  +G L +             PS+A+ASQ+ +     RV  H+LDW  +  PS E
Sbjct:   86 MQTVDLDRISPSDFQRLYDQPDGRPVLLKNAIAMRQEERESWCEELVGEMAGSEIEFQRRCK--GSTSLEYESFEDFI-DIVFDSKHDDYYFLFDESLL---EDKESLRKRISLRQDFFPGNLFELFPKSIRPKDSCLVIGGVGSRSTLHADPYDWMGWNFCLEGSKLWTFLPPSFCGERVAARADLELLISLEADDKSSYRLEPNAWDAEDEQMTNFSLAAGWQSDNDLYREMFATGIV-----------------WME--------QNSQQNLINLGRLEI-------------PSIAIASQYANLAGFDRVLNHMLDW--SKLPSEE 369          
BLAST of mRNA_P-littoralis_Contig65.109.1 vs. uniprot
Match: A0A8J2SEA1_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SEA1_9STRA)

HSP 1 Score: 136 bits (342), Expect = 1.420e-31
Identity = 97/282 (34.40%), Postives = 132/282 (46.81%), Query Frame = 1
Query:  271 VSEVVDFSRPCILTGALVIPECEAWCDALLEDLGEETCAFQIRDNNTGRSGVFEASLVDFVRGLQEESTHEESWYLLEEDLLGLSQARPELGALLAKSQDLLGMDEF-ELFPASVRPKNLCAIIGGVGARSFLHSDPMEWMGWNVLLEGRKSWTFLPPLPELDAPLGTYRLAPNAFGSHNISAGWQSDVDLY--QRGATAXXXXXXXXXXXXXXXXCCASWPKEGEGHEVMQHAVSGVQEVGDLVLIPPRHWHQVYHLEPSVAVASQFMDQRVRHRVFRHIL 1107
            +   +D  +P +  GAL    C+AW   L+E  G+     QI  +       F+A L +F       STHE   +L +E LL   +      A+  +     G + + + FPA  RP + C +  G GARS LH DP +W G ++ LEG K W FL  L   DA L  Y+L   AFG    SAG QSD+DLY  Q G                     A         +V     + +Q  GD+V++PP+ WHQ Y LEPS AVASQF  +R    VF H++
Sbjct:   32 IRAALDSGQPFVAAGALSPEACDAWTGNLMEGFGDAIVTQQIAGD------PFDAPLAEFFYDALA-STHETPHFLFDEALL---EGNLRAAAIAPQRAIFEGEESWLDAFPAERRPADACVVCAGAGARSPLHRDPYDWTGTSLCLEGSKVWRFL--LDVDDADLEAYKLPSEAFGDD--SAGTQSDIDLYCVQEG---DWPDAADFEDDRDLVKAKAGPENFTPSTQVPGRFCTALQFAGDVVIVPPKSWHQTYALEPSCAVASQFCGRRDAPTVFEHMI 296          
BLAST of mRNA_P-littoralis_Contig65.109.1 vs. uniprot
Match: F0YQV8_AURAN (Expressed protein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YQV8_AURAN)

HSP 1 Score: 129 bits (324), Expect = 1.640e-29
Identity = 99/287 (34.49%), Postives = 130/287 (45.30%), Query Frame = 1
Query:  229 PLERIDVSGLSPSQVSEVVDFSRPCILTGALVIPECEAWCDALLEDLGEETCAFQIRDN--NTGRSGVFEASLVDFVRGLQEESTHEESWYLLEEDLL-GLSQARPELGALLAKSQDLLGMDE--FELFPASVRPKNLCAIIGGVGARSFLHSDPMEWMGWNVLLEGRKSWTFLPPLPELDAPLGTYRLAPNAFGSHNISAGWQSDVDLYQRGATAXXXXXXXXXXXXXXXXCCASWPKEGE-----GHEVMQHAVSGVQEVGDLVLIPPRHWHQVYHLEPSVAVAS 1059
            P  R+D      + ++  +D   P I   AL   +CEAW DAL+  LG+     Q R           FE +L          S+H    +L +E LL G    R   GA +   + + G +   F+ FP S RP++ C +  G GARS LH DP +W G ++ +EG K W F   L   DA LG Y LA  AFG    SAG QSD DLY R                      A+W                  V+ +Q  GD+V++PPR WHQ Y LEPS+AVAS
Sbjct:   30 PAARVDAR--DHAAIAAALDAGEPFIAAEALSARDCEAWTDALMMRLGDAPVRRQRRGEALEMPLGAFFEDALT---------SSHALPSFLFDEFLLDGDDDLR---GAAVGPQRAIFGGERSWFDHFPESRRPRDGCVVGAGAGARSPLHRDPYDWTGTSLCVEGSKVWRFA--LDVADADLGAYELASEAFGGD--SAGTQSDADLYAR---RVGDGWPEPYAYDDDPALAATWSAAARFAPDVALPKTARFVTALQRAGDVVVVPPRAWHQTYALEPSLAVAS 295          
BLAST of mRNA_P-littoralis_Contig65.109.1 vs. uniprot
Match: A0A835YWS3_9STRA (JmjC domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YWS3_9STRA)

HSP 1 Score: 122 bits (306), Expect = 2.040e-28
Identity = 76/188 (40.43%), Postives = 100/188 (53.19%), Query Frame = 1
Query:  706 LEGRKSWTFLPPLPELDAPLGTYRLAPNAFG-SHNISAGWQSDVDLYQRGATAXXXXXXXXXXXXXXXXCCASWPKEGEGHEVMQHAVSGVQEVGDLVLIPPRHWHQVYHLEPSVAVASQ-FMDQRVRHRVFRHILDWCGAASPSSEDFMFSSDFDALTPADQIREVLRAALVARYGREKGLEAFTSL 1263
            +EG K WTFLPP PE    L  YRL PNA+G S+N+SAGWQS VDLY+  + +                  A++   G   +V       VQ  G+ VLIPPR WHQV HL PS+AVASQ +   R R R+F+HI DWCG    ++       +  +  P  Q+  VL+  L A++G + G   F  L
Sbjct:    1 MEGEKLWTFLPPCPE--HLLDGYRLPPNAWGGSYNVSAGWQSPVDLYRPFSESGAHGSDGIMLS-----AAAAY---GVPEDVWARRKQVVQREGETVLIPPRWWHQVIHLAPSIAVASQHYAGARGRRRIFQHIRDWCGCGGSAAPP-----EIRSWPPQKQVEWVLQEGLCAKHGTDVGERLFKEL 173          
BLAST of mRNA_P-littoralis_Contig65.109.1 vs. uniprot
Match: A0A830HZM1_9CHLO (JmjC domain-containing protein n=2 Tax=Pycnococcus provasolii TaxID=41880 RepID=A0A830HZM1_9CHLO)

HSP 1 Score: 124 bits (312), Expect = 1.340e-27
Identity = 87/275 (31.64%), Postives = 129/275 (46.91%), Query Frame = 1
Query:  340 AWCDALLEDLGEETCAFQIRDNNTGRSGVFEASLVDFVRGLQEESTHEESWYLLEEDLLGLSQARPELGALLAKSQDLLGMDEFELFPASVRPKNLCAIIGGVGARSFLHSDPMEWMGWNVLLEGRKSWTFLP----PLPELDAPLGTYRLAPNAFGSHN--ISAGWQSDVDLY-QRGATAXXXXXXXXXXXXXXXXCCASWPKEGEGHE--------VMQHAVSGVQEVGDLVLIPPRHWHQVYHLEPSVAVASQFMDQRVRHRVFRHILDWCG 1119
            +W   L+           +R+NN   +  F A  ++ +  +   S H+ S  ++EEDLL  S A  +  A L K  ++   ++ +  P S+RP   C + GG G+RS LH+D   W+GWN L+EG K+WTF+P    P  E+       R+ P A+   N  I AGWQ+ VD Y +R A                     S+   G   E        +  H ++  Q  G+LV+IPP  +HQVYH   +VA+A Q+ D      V RH+  W G
Sbjct:   52 SWLSDLVASAENTHVEVLLRENN--HTSSFVAPFMEALGEIAHASDHDSSVLIVEEDLLANSPAHVQDAARLPK--EICAENKLDQLPPSLRP-GTCVLFGGAGSRSSLHADAFGWVGWNYLVEGEKTWTFIPHDAFPADEV-----CVRVPPAAWAGDNTSIGAGWQTAVDAYAERSADG------------------TSFTARGGTQEHARAVEEAIQNHGITVHQSEGELVIIPPECFHQVYHHTATVAIAGQYADNTNWPIVCRHVGRWVG 298          
BLAST of mRNA_P-littoralis_Contig65.109.1 vs. uniprot
Match: A0A812XB14_9DINO (PSR protein n=2 Tax=Symbiodinium TaxID=2949 RepID=A0A812XB14_9DINO)

HSP 1 Score: 126 bits (316), Expect = 1.380e-26
Identity = 87/272 (31.99%), Postives = 124/272 (45.59%), Query Frame = 1
Query:  346 CDALLEDLGEETCAFQ--IRDNNTGRSGVFEASLVDFVRGLQEESTHEESWYLLEEDLLGLSQARPELGALLAKSQDLLGMDEFELFPASVRPKNLCAIIGGVGARSFLHSDPMEWMGWNVLLEGRKSWTFLPPLPELDAPLGTYRLAPNAFGSHN-------ISAGWQSDVDLY-QRGATAXXXXXXXXXXXXXXXXCCASWPKEGEGHEVMQHAVSGVQEVGDLVLIPPRHWHQVYHLEPSVAVASQFMDQRVRHRVFRHILDWCGAASP 1131
            C  LLE+ G +   ++   +   +  +      L DFV      S HE+   L++E+++  +       +LL  +   L  D F  FP  +RP  LC ++GG GARS LH DP+ W GWN LL+GRK W F P +P+       +R A   FG          I +GW+SDVDL+  R  TA                  A +P        ++H    VQE G+ ++ P   WHQ YHL P+   A Q ++     RV  HI+ WC    P
Sbjct:   39 CKTLLEEAGCQEVEYKRAAQGELSLATDSLSRVLCDFVPN----SCHEDPVLLMDENVVSTTSLA---NSLLEAAPPFLREDLFCEFPLMLRPAQLCLVVGGQGARSDLHIDPLSWTGWNCLLQGRKLWRFFPDIPQ---HAEAFRPASRPFGIRKGGAEVCTIGSGWRSDVDLFANRTNTAAEPPCDSFGWLSPDL---AKFPHVKGCSAPLEH----VQEPGETLIFPGHWWHQTYHLTPTFGFAGQVLNSGNLGRVLGHIIRWCELEVP 293          
BLAST of mRNA_P-littoralis_Contig65.109.1 vs. uniprot
Match: A0A812KFH2_9DINO (PSR protein n=2 Tax=Symbiodinium TaxID=2949 RepID=A0A812KFH2_9DINO)

HSP 1 Score: 120 bits (302), Expect = 2.160e-26
Identity = 82/271 (30.26%), Postives = 119/271 (43.91%), Query Frame = 1
Query:  346 CDALLEDLGEETCAFQIRDNNTGR--SGVFEASLVDFVRGLQEESTHEESWYLLEEDLLGLSQARPELGALLAKSQDLLGMDEFELFPASVRPKNLCAIIGGVGARSFLHSDPMEWMGWNVLLEGRKSWTFLPPLPELDAPLGTYRLAPNAFGSHN-------ISAGWQSDVDLYQRGATAXXXXXXXXXXXXXXXXCCASWPKEGEGHEVMQHAVSGVQEVGDLVLIPPRHWHQVYHLEPSVAVASQFMDQRVRHRVFRHILDWCGAASP 1131
            C  LLE+ G +   ++   +      + +    L DFV      S HE+   L++E+++  +       +LL  +   L  D F  FP  +RP  LC ++GG GARS LH DP+ W GWN LL+GRK W F P +P+       +R     FG          I +GW+SDVDL+                          +P        ++H    VQE G+ ++ P   WHQ YHL P+   A Q ++     RV  HI+ WC    P
Sbjct:   39 CKTLLEEAGCQEVEYKRATHGELNLATDLLSKVLCDFVPN----SYHEDPVLLMDENVVSTTSLA---NSLLEAAPPFLREDLFCEFPRMLRPAPLCLVVGGRGARSDLHIDPLSWTGWNCLLQGRKLWRFFPDIPQ---NAEAFRPMSRPFGIRKGGAEVCTIGSGWRSDVDLFAN--RTHPAAEPLCDSFGSLSPDLGQFPHVKGCSAPLEH----VQEPGETLIFPGHWWHQTYHLTPTFGFAGQVLNSGNLGRVLGHIIRWCELEVP 293          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig65.109.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 19
Match NameE-valueIdentityDescription
D8LQI0_ECTSI3.020e-17472.91JmjC domain-containing protein n=2 Tax=Ectocarpus ... [more]
A0A7S2R9P6_9STRA1.350e-5535.98Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
W7TWL4_9STRA1.630e-3932.20F-box protein n=1 Tax=Nannochloropsis gaditana Tax... [more]
L1JM62_GUITC2.610e-3231.21Uncharacterized protein n=1 Tax=Guillardia theta (... [more]
A0A8J2SEA1_9STRA1.420e-3134.40Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
F0YQV8_AURAN1.640e-2934.49Expressed protein (Fragment) n=1 Tax=Aureococcus a... [more]
A0A835YWS3_9STRA2.040e-2840.43JmjC domain-containing protein n=1 Tax=Tribonema m... [more]
A0A830HZM1_9CHLO1.340e-2731.64JmjC domain-containing protein n=2 Tax=Pycnococcus... [more]
A0A812XB14_9DINO1.380e-2631.99PSR protein n=2 Tax=Symbiodinium TaxID=2949 RepID=... [more]
A0A812KFH2_9DINO2.160e-2630.26PSR protein n=2 Tax=Symbiodinium TaxID=2949 RepID=... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig65contigP-littoralis_Contig65:557895..561644 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D8LQI0
Model size2231
Max annot lvl2759|Eukaryota
Hectar predicted targeting categorysignal peptide
Exons3
Evalue4.3e-180
EggNOG OGs2CZ69@1|root,2S8PH@2759|Eukaryota
Ec32 ortholog descriptionJumonji domain protein
Ec32 orthologEc-10_005720.1
Cds size1257
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791359.8725543-UTR-P-littoralis_Contig65:557894..5579331680791359.8725543-UTR-P-littoralis_Contig65:557894..557933Pylaiella littoralis U1_48UTRP-littoralis_Contig65 557895..557933 +
1680791359.9253776-UTR-P-littoralis_Contig65:560709..5616441680791359.9253776-UTR-P-littoralis_Contig65:560709..561644Pylaiella littoralis U1_48UTRP-littoralis_Contig65 560710..561644 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791359.8849044-CDS-P-littoralis_Contig65:557933..5583851680791359.8849044-CDS-P-littoralis_Contig65:557933..558385Pylaiella littoralis U1_48CDSP-littoralis_Contig65 557934..558385 +
1680791359.8972278-CDS-P-littoralis_Contig65:558708..5592401680791359.8972278-CDS-P-littoralis_Contig65:558708..559240Pylaiella littoralis U1_48CDSP-littoralis_Contig65 558709..559240 +
1680791359.9131646-CDS-P-littoralis_Contig65:560436..5607091680791359.9131646-CDS-P-littoralis_Contig65:560436..560709Pylaiella littoralis U1_48CDSP-littoralis_Contig65 560437..560709 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig65.109.1prot_P-littoralis_Contig65.109.1Pylaiella littoralis U1_48polypeptideP-littoralis_Contig65 557934..560709 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig65.109.1

>prot_P-littoralis_Contig65.109.1 ID=prot_P-littoralis_Contig65.109.1|Name=mRNA_P-littoralis_Contig65.109.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=419bp
MRWLGVAGTAVLIAVAVDSFNVLPQRKSSGKSQAAVRSTLLPASNAAGGC
TANAWYTGTCAIAPLERIDVSGLSPSQVSEVVDFSRPCILTGALVIPECE
AWCDALLEDLGEETCAFQIRDNNTGRSGVFEASLVDFVRGLQEESTHEES
WYLLEEDLLGLSQARPELGALLAKSQDLLGMDEFELFPASVRPKNLCAII
GGVGARSFLHSDPMEWMGWNVLLEGRKSWTFLPPLPELDAPLGTYRLAPN
AFGSHNISAGWQSDVDLYQRGATAAAATTTTTTARAAGSTCCASWPKEGE
GHEVMQHAVSGVQEVGDLVLIPPRHWHQVYHLEPSVAVASQFMDQRVRHR
VFRHILDWCGAASPSSEDFMFSSDFDALTPADQIREVLRAALVARYGREK
GLEAFTSLECVTAPSSSP*
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mRNA from alignment at P-littoralis_Contig65:557895..561644+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig65.109.1 ID=mRNA_P-littoralis_Contig65.109.1|Name=mRNA_P-littoralis_Contig65.109.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=3750bp|location=Sequence derived from alignment at P-littoralis_Contig65:557895..561644+ (Pylaiella littoralis U1_48)
GGCAAACGCGCCGGCATCTGATCTGAGGCGCCGAGGACGATGAGATGGCT GGGTGTAGCAGGGACTGCGGTTCTGATCGCCGTCGCTGTGGATTCATTCA ACGTATTGCCGCAGCGGAAGAGCTCGGGAAAGTCTCAAGCGGCGGTCCGG TCGACATTATTACCAGCGTCGAATGCTGCTGGTGGTTGTACCGCAAACGC GTGGTATACCGGTACATGCGCCATTGCACCTCTAGAGCGAATAGATGTCA GCGGACTTTCGCCGTCGCAAGTCTCCGAAGTGGTCGATTTCTCCCGGCCT TGCATCTTGACAGGAGCGCTGGTAATACCTGAGTGCGAGGCTTGGTGCGA CGCGTTGCTGGAAGATTTGGGGGAGGAAACCTGTGCTTTTCAGATACGCG ACAACAACACGGGCCGGAGTGGGGTGTTCGAGGCGAGCCTGGTGGACTTC GTTCGGGGCTTGCAGGAGGAGAGCACGCACGAGGAAAGCTGGTGAGTGCG GGGCAGGTGCATCATGGAATCCGTTACCCCCCCCCCCTTCCCCCCATCCT GCCCTACCGGTAGCTTATGAATATTGAACGTATTCCTCTCTTCGTTCTTG CAGATGAAGACAGCATGTTTATTGGATGCATCCGGAGCAGTGTCGTCTCC CAACAGCTACCGAAAGAGGGTCCTCTGTTTAATTGAACGCTTCCGACACT TCTTTGTGCAGGACATGAACTCGGGTTGGTTCGCTTCAAGAAGATACACC ACAGTGTCAAGAAAGTGCGTACTACGTATTGCTGTCAATGACACAACACC CGATCGTGCCCCAGGTATTTGCTAGAGGAGGATCTTCTAGGGCTGTCTCA AGCGAGGCCTGAACTCGGTGCTCTGCTCGCGAAGTCCCAGGACCTTCTAG GCATGGACGAGTTCGAGCTTTTCCCTGCTTCGGTCAGGCCGAAAAACCTG TGCGCCATCATCGGAGGTGTGGGTGCGCGCTCCTTTCTCCACAGCGACCC GATGGAATGGATGGGCTGGAATGTTTTGCTAGAAGGTCGGAAATCCTGGA CGTTCCTCCCCCCGCTGCCCGAACTCGACGCCCCCCTCGGCACCTACCGC CTGGCGCCCAACGCGTTCGGTTCCCACAACATTTCGGCCGGGTGGCAGAG CGACGTAGACCTCTACCAGCGAGGGGCAACAGCAGCAGCAGCAACAACAA CAACAACAACCGCGCGGGCAGCCGGAAGCACGTGCTGCGCTTCGTGGCCG AAAGAGGGCGAGGGCCATGAGGTCATGCAGCACGCGGTTAGCGGAGTACA GGAGGTGGGGGACCTTGTTCTCATCCCACCGCGACATTGGCACCAGGTGA TGTTTTTTTTGTCATGTAATGCTATCGACTAGCGAGGCATGTCCTTTCCG TGCAATCGATGTTCAGCACTGTAGTATTGTAAAGCTCAAACGGTACCGCA ACATGTGCGAGAGTATATCATGCGGCATAACCATAGCGTCTCACGGCTCG GGAAACTTTCCACCGCATATTTGGGGTTGTGTTGCGCTTGGTAATTTCCG ATCTTCAGAAGAACAGTTTTTGTATGAAAGGAGACGAGCTCTGCGACCAC CTCTACTTACTCCCCTCTTCGCCTGTATTCTTCCTCCCTAGATTGCCGCA GTATTTTGTCGTCTTCAATACTTGGCCGCAAGCGCCCATGCAACATCAAC AAGTTTGTGTTGTACAGACTACCTGCAGCTACGTAAGCCAACATCTACCG GTGTCAGCCTTTGCAACCACCTGTCGGGACGCTCACAAAATTATCACAAG AAGTCAAGCTCGATGACGTGTCATGAACATTAAGGAAGGGCGTGTTTTTG TTTAGTGAGAGTGCGATTTACCTGAGAAGGACCCTCACTACGGCTGTAGG GTCCTACCTGGTCGTATTTTCCCGGTAAACAAGGCGCTCATATTACACCT CGTTTGAGGCCGAACCTTTCAGAGCCAAGGAGATCCTCCTCTCGATTTAT CGTCGCGTTGCACTGGAAGGGGCTTGCTTTTATATCGTGTCACATCAGAA ACACTCCTGCTGTGTACGTGAAATTTGCCCTCCATTAGTTGCTGCATTCA TCAGCGCAGTATCCTCCCCTCCGCTCGGAACCGCCGAAAATCATGGCGCG GAGATGTGCGTACTGCAGCACATGCACACCCTGTTTACACACCCCGTTTG CCGCTTCGCCTTTTTATTTTAGATATTGTTGATGAACACACGCACCGTTC CTTCGTACTCGCAGTATTTTCTAACCTTGAGCTGACGGTTAGCGCGTTTT TCTATCGTGCAAGACCAAACACTGTAAGCCCGTCCATGCGCCCCAACTCG GCCGTGATTGATGATCATGTGCACATGTCATACGCATGCTTGGGTTGCAA TACAAGCCAACTTTCATTGTAAAGAAACACCGCAAGCTAGCTTTCGTTGC GAAGCAGCAGGTCTTCCACTGCGAGGAACAACACGCCACCTTGCACTATC GACGACATCACACCCCCTGGTCTGTTAAATTATGAATCTCAGGTCTATCA CCTGGAGCCTTCCGTCGCGGTGGCCTCGCAATTCATGGACCAGCGAGTGA GACATCGCGTGTTTCGACATATCTTGGACTGGTGTGGCGCTGCTTCTCCT TCTTCAGAAGATTTTATGTTCTCCTCCGACTTCGATGCGCTGACGCCTGC CGATCAAATCCGAGAGGTGCTGAGGGCCGCCCTTGTGGCACGCTACGGGC GGGAAAAGGGCTTGGAAGCCTTTACCAGTCTTGAATGTGTAACCGCGCCA TCTTCATCGCCTTGACGGATGACGTACAAGTATCATGCACACACCACCCG GGTTCTGTTTGCTCGTCTGACGCCTATCTACAGGAGTGCTCTGATTTTGT ATGCATTGCCCATAGAACGGCTGGCTGAGGCCTCGGGTCGGCGATGTGTC ATGATTGATCCTGAGGCGTTCTTTGTACAGGAAACAGCGTGTGACAGTTT TTTTGGGGAGTGGAGAGAAGCGAATATACTGAACTTTGGGAAAGATGGAT ATTTCGTTTCCAAAAAGACAAGAGCTAGAAGATAGAGAGTTCATAAGCAG TACTTTATGTAGCAACGAGTGAAGATTGTCGTATTTTCTCAAAATATTCG AAATCGCCCTGAAGACACTTGTATTTCACAGGCTGGTCAAGGTTGAAGAC CCAGAGCTAAATCAGAACGCACGCGGTCTTTTCAAGTCAGACCCTGAAAA TTTGCAAGCATGAAAAATGGGCGACTCTACGCAACTTTACCCGGTAGATT TTTTTGTATTTTTTGGACAGATGTCGGGAAGTTGAGGTGTCTCGAGTGTA CCTGGGTCGGCTGGGACCCTAGACGTTGAGATGAAAATAAATAAATACTA AAAATTCCGGTCAATAGCGTAAGTGCTTTGGGACATGCGTGCATTTTTTG GGGTCTCCCAAAAAAAAAGTCGTTAGAAAGCACACTTCAGTTTCATGAAA TTTGAAGAACCTCCTCCCAAGTCAGGTTTTGTACGGGGCCGTCTCTATCA TCAGGGCGTACTGGAGCTTTAATGAATCAAAACTGCCTCAGTTTTTGAAT TTGAGAAGGAAGATACTTGTGAGCACCCTCCTTGGATTCCAAAGAGACCA TCCGTTTTAAATAAACAAAAATCTCGACACGTTTTCTACGCTTTAACATC GTTTTCAAGCGCATTCGTTGGCCGGAAAATATGTACTTTCGCTTGGCGCC
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Coding sequence (CDS) from alignment at P-littoralis_Contig65:557895..561644+

>mRNA_P-littoralis_Contig65.109.1 ID=mRNA_P-littoralis_Contig65.109.1|Name=mRNA_P-littoralis_Contig65.109.1|organism=Pylaiella littoralis U1_48|type=CDS|length=1257bp|location=Sequence derived from alignment at P-littoralis_Contig65:557895..561644+ (Pylaiella littoralis U1_48)
ATGAGATGGCTGGGTGTAGCAGGGACTGCGGTTCTGATCGCCGTCGCTGT
GGATTCATTCAACGTATTGCCGCAGCGGAAGAGCTCGGGAAAGTCTCAAG
CGGCGGTCCGGTCGACATTATTACCAGCGTCGAATGCTGCTGGTGGTTGT
ACCGCAAACGCGTGGTATACCGGTACATGCGCCATTGCACCTCTAGAGCG
AATAGATGTCAGCGGACTTTCGCCGTCGCAAGTCTCCGAAGTGGTCGATT
TCTCCCGGCCTTGCATCTTGACAGGAGCGCTGGTAATACCTGAGTGCGAG
GCTTGGTGCGACGCGTTGCTGGAAGATTTGGGGGAGGAAACCTGTGCTTT
TCAGATACGCGACAACAACACGGGCCGGAGTGGGGTGTTCGAGGCGAGCC
TGGTGGACTTCGTTCGGGGCTTGCAGGAGGAGAGCACGCACGAGGAAAGC
TGGTATTTGCTAGAGGAGGATCTTCTAGGGCTGTCTCAAGCGAGGCCTGA
ACTCGGTGCTCTGCTCGCGAAGTCCCAGGACCTTCTAGGCATGGACGAGT
TCGAGCTTTTCCCTGCTTCGGTCAGGCCGAAAAACCTGTGCGCCATCATC
GGAGGTGTGGGTGCGCGCTCCTTTCTCCACAGCGACCCGATGGAATGGAT
GGGCTGGAATGTTTTGCTAGAAGGTCGGAAATCCTGGACGTTCCTCCCCC
CGCTGCCCGAACTCGACGCCCCCCTCGGCACCTACCGCCTGGCGCCCAAC
GCGTTCGGTTCCCACAACATTTCGGCCGGGTGGCAGAGCGACGTAGACCT
CTACCAGCGAGGGGCAACAGCAGCAGCAGCAACAACAACAACAACAACCG
CGCGGGCAGCCGGAAGCACGTGCTGCGCTTCGTGGCCGAAAGAGGGCGAG
GGCCATGAGGTCATGCAGCACGCGGTTAGCGGAGTACAGGAGGTGGGGGA
CCTTGTTCTCATCCCACCGCGACATTGGCACCAGGTCTATCACCTGGAGC
CTTCCGTCGCGGTGGCCTCGCAATTCATGGACCAGCGAGTGAGACATCGC
GTGTTTCGACATATCTTGGACTGGTGTGGCGCTGCTTCTCCTTCTTCAGA
AGATTTTATGTTCTCCTCCGACTTCGATGCGCTGACGCCTGCCGATCAAA
TCCGAGAGGTGCTGAGGGCCGCCCTTGTGGCACGCTACGGGCGGGAAAAG
GGCTTGGAAGCCTTTACCAGTCTTGAATGTGTAACCGCGCCATCTTCATC
GCCTTGA
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