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Homology
BLAST of mRNA_P-littoralis_Contig65.106.9 vs. uniprot
Match: D8LQH9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQH9_ECTSI) HSP 1 Score: 407 bits (1046), Expect = 3.420e-127 Identity = 335/642 (52.18%), Postives = 371/642 (57.79%), Query Frame = 1
Query: 316 MAAFMAQAHEKRLQAMEVVKAEVQRGYEEQIADLQSKLAALPASA-GDVGAAAPVP--VEEPHLVGAGAGGAAIESAGSAVGAGSTTTQHPGYAARSARPGWEARWGSEEVARTSSPVSAADVVAMEAR-ATATASDGAAAHPAYTARAKRPGWEARWGSEEVARIGGGGASXXXXXXXXXXXXXXXXXAAGSLAAGTS-HPAYAARAQRPGWEARWGNEEVGRAGGNVLAAAPXXXXXXXXXXXXXXXXXXXXXXXXEVEGNVHPAYAGRLPGGRHRRPTSLSLAAVFPSLRPRCDRYHTYVTTPARVLHLPLFVPARTQRPGWEARWGNEEPARMAATVTXXXXXXXXXXXXXXXXXXXXTTTPVDSHPAYAARSRRPGWEARWGSEEKDRM------AGA------------------------------------------AXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMDRAEDPLADDFMPDDVGELQSMVLSNRRYFQEYLLKSLEASNEVKQSKAKIEAELSSSNAKLAAEQQLRESLQESFLEYMSRSGDAGASGKTRIAELEKETARLAAQAEELQLYTQEYMVKASSEKQKAIEAATASARAQSAERIAALQAHVLELQAGG 2082
MA FMA+AHE RLQAME VK EVQRGYEEQIADLQSKLAALP A D GAAA EEP LVG G G A++ AG A QHP YAARSARPGWEARWG+EE AR S V+AADV +ME+R A A+A G A HPAY ARA+RPGWE RWG EE AR AS A G AA HPAYAAR QRPGWE RWG EE R V A +VHPAYA ARTQRPGWE RWG+EEPARM A XXXXXXXXXXXXXX + P D HPAYAAR++RPGWEARWGSEE RM AGA A X XXXXXXXXXXXXXXXX +DPLAD+F+ DDV EL+SMV+SNRR FQ+YLLKSL ASNE+KQS A +EAELS S +LAAE+QLRESLQESFL YMSRSGDAGA+GK ++A+LEK+ LAA+A+EL+ +TQEYMVKASS+KQ A+E A A+ARAQSAERIAALQA VLELQAGG
Sbjct: 1 MAEFMAKAHENRLQAMEAVKKEVQRGYEEQIADLQSKLAALPPPADADKGAAAATAFRAEEPVLVGVGQG-ASMGFAGGAA-------QHPSYAARSARPGWEARWGAEEPARASPAVTAADVSSMESRVAAASAPGGGAVHPAYAARAQRPGWEERWGMEEPARKTMAAASTSASAEVVPQ-------AQGKAAAPADVHPAYAARTQRPGWEERWGAEEPARKTMTVAGAGSTSAPAEVATQALGTPA---------APADVHPAYA------------------------------------------------ARTQRPGWEERWGSEEPARMTAATAXXXXXXXXXXXXXXSTA---ASPPADVHPAYAARAQRPGWEARWGSEEPARMIAATSTAGAPTASGKTALPDAXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGADAGAIAVAGAAAGFATAGXLXXXXXXXXXXXXXXXXXGAGDDPLADEFLTDDVAELRSMVVSNRRSFQDYLLKSLWASNELKQSNAVLEAELSRSKVRLAAEEQLRESLQESFLGYMSRSGDAGAAGKAQVAKLEKDVLTLAAEADELRRFTQEYMVKASSDKQNALEEAAATARAQSAERIAALQAQVLELQAGG 567
BLAST of mRNA_P-littoralis_Contig65.106.9 vs. uniprot
Match: A0A6H5KQ96_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQ96_9PHAE) HSP 1 Score: 231 bits (590), Expect = 7.470e-66 Identity = 159/227 (70.04%), Postives = 187/227 (82.38%), Query Frame = 1
Query: 1402 DSHPAYAARSRRPGWEARWGSEEKDRMAGAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMDRAEDPLADDFMPDDVGELQSMVLSNRRYFQEYLLKSLEASNEVKQSKAKIEAELSSSNAKLAAEQQLRESLQESFLEYMSRSGDAGASGKTRIAELEKETARLAAQAEELQLYTQEYMVKASSEKQKAIEAATASARAQSAERIAALQAHVLELQAGG 2082
D HPAYAAR RPGWEARWGSEEK+R+AGA XXXXXXXXXXXXXXXXXXXX +DPLAD+F+PDDV EL+SMV+SNRR FQ+YLLKSLEASNE+KQS AK+E ELS + A+LAAE+QLRESLQ+SFL+YMSRSGDAGA+GK ++A+LEK+ LAA+A+EL+ +TQEYMVKASS+KQ A++ A A+ARAQSA RIAALQA VLELQAGG
Sbjct: 24 DLHPAYAARLGRPGWEARWGSEEKERVAGAEAGAIAVXXXXXXXXXXXXXXXXXXXXADEASAGSGGA--GDDPLADEFLPDDVAELRSMVVSNRRSFQDYLLKSLEASNELKQSNAKLEVELSRAKARLAAEEQLRESLQKSFLDYMSRSGDAGAAGKAQVAKLEKDVLALAAEADELRRFTQEYMVKASSDKQNALQEAAATARAQSAGRIAALQAQVLELQAGG 248
BLAST of mRNA_P-littoralis_Contig65.106.9 vs. uniprot
Match: A0A835Z6M2_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z6M2_9STRA) HSP 1 Score: 69.3 bits (168), Expect = 6.070e-9 Identity = 58/170 (34.12%), Postives = 76/170 (44.71%), Query Frame = 1
Query: 316 MAAFMAQAHEKRLQAMEVVKAEVQRGYEEQIADLQSKLAALPASAGDVGAAAPVPVEEPHLVGAGAGGAAIESAGSAVGAGSTTTQHPGYAARSARPGWEARWGSEEVARTSSPVSAADVVAMEARATATASDGAA------AHPAYTARAKRPGWEARWGSEEVARIGG 807
MA + A + RL +M+ ++ E+ + Q A ++ ++AAL A V AA VP + + H YAAR R GWE RWG +EVAR VS A++A A A HPAY AR +R GWE RWGS EV R G
Sbjct: 1 MADLVLSAQQSRLNSMDALRKELDSAFNAQAASVKDEIAALKPQA--VNGAAAVPAHTATVP--------------------VPSVHAAYAARLTRKGWEDRWGDDEVAR----VSGDGATALQASAAPAAXXXXXXXXXXXVHPAYLARTQRAGWEDRWGSSEVQRTSG 144
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Stop | 1 |
| Start | 1 |
| Model size | 3049 |
| Hectar predicted targeting category | chloroplast |
| Exons | 10 |
| Ec32 ortholog description | expressed unknown protein |
| Ec32 ortholog | Ec-10_005710.1 |
| Cds size | 2016 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1680791359.6920493-UTR-P-littoralis_Contig65:545216..545285 | 1680791359.6920493-UTR-P-littoralis_Contig65:545216..545285 | Pylaiella littoralis U1_48 | UTR | P-littoralis_Contig65 545217..545285 + |
| 1680791359.8370655-UTR-P-littoralis_Contig65:554885..555849 | 1680791359.8370655-UTR-P-littoralis_Contig65:554885..555849 | Pylaiella littoralis U1_48 | UTR | P-littoralis_Contig65 554886..555849 + |
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1680791359.7217076-CDS-P-littoralis_Contig65:545285..545642 | 1680791359.7217076-CDS-P-littoralis_Contig65:545285..545642 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig65 545286..545642 + |
| 1680791359.7332826-CDS-P-littoralis_Contig65:547721..547884 | 1680791359.7332826-CDS-P-littoralis_Contig65:547721..547884 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig65 547722..547884 + |
| 1680791359.7462757-CDS-P-littoralis_Contig65:548758..548911 | 1680791359.7462757-CDS-P-littoralis_Contig65:548758..548911 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig65 548759..548911 + |
| 1680791359.7562208-CDS-P-littoralis_Contig65:549389..549563 | 1680791359.7562208-CDS-P-littoralis_Contig65:549389..549563 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig65 549390..549563 + |
| 1680791359.768573-CDS-P-littoralis_Contig65:550171..550377 | 1680791359.768573-CDS-P-littoralis_Contig65:550171..550377 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig65 550172..550377 + |
| 1680791359.7781918-CDS-P-littoralis_Contig65:551015..551564 | 1680791359.7781918-CDS-P-littoralis_Contig65:551015..551564 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig65 551016..551564 + |
| 1680791359.7933934-CDS-P-littoralis_Contig65:551977..552081 | 1680791359.7933934-CDS-P-littoralis_Contig65:551977..552081 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig65 551978..552081 + |
| 1680791359.8038757-CDS-P-littoralis_Contig65:552681..552756 | 1680791359.8038757-CDS-P-littoralis_Contig65:552681..552756 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig65 552682..552756 + |
| 1680791359.8134077-CDS-P-littoralis_Contig65:553651..553790 | 1680791359.8134077-CDS-P-littoralis_Contig65:553651..553790 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig65 553652..553790 + |
| 1680791359.8230011-CDS-P-littoralis_Contig65:554789..554885 | 1680791359.8230011-CDS-P-littoralis_Contig65:554789..554885 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig65 554790..554885 + |
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig65.106.9 >prot_P-littoralis_Contig65.106.9 ID=prot_P-littoralis_Contig65.106.9|Name=mRNA_P-littoralis_Contig65.106.9|organism=Pylaiella littoralis U1_48|type=polypeptide|length=672bp
MVTMCAAVVVRAAAVASLCLAVNGFTSPTAVGSTAAAAASSRCCISTSLV
QQQQRPPQRSRIALHAAVGSSEDDGIEEYKKQMAAFMAQAHEKRLQAMEV
VKAEVQRGYEEQIADLQSKLAALPASAGDVGAAAPVPVEEPHLVGAGAGG
AAIESAGSAVGAGSTTTQHPGYAARSARPGWEARWGSEEVARTSSPVSAA
DVVAMEARATATASDGAAAHPAYTARAKRPGWEARWGSEEVARIGGGGAS
GAAGAPATATATAPAASAAGSLAAGTSHPAYAARAQRPGWEARWGNEEVG
RAGGNVLAAAPAPAAVAAAAVAAAAAAAAAAAAAAEVEGNVHPAYAGRLP
GGRHRRPTSLSLAAVFPSLRPRCDRYHTYVTTPARVLHLPLFVPARTQRP
GWEARWGNEEPARMAATVTSTSTSTSPPAAVPAAAVAAATTTPVDSHPAY
AARSRRPGWEARWGSEEKDRMAGAAAGAVAAAGAAAGFATAGGLDAATPA
SASASASASSGMDRAEDPLADDFMPDDVGELQSMVLSNRRYFQEYLLKSL
EASNEVKQSKAKIEAELSSSNAKLAAEQQLRESLQESFLEYMSRSGDAGA
SGKTRIAELEKETARLAAQAEELQLYTQEYMVKASSEKQKAIEAATASAR
AQSAERIAALQAHVLELQAGG* back to topmRNA from alignment at P-littoralis_Contig65:545217..555849+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_P-littoralis_Contig65.106.9 ID=mRNA_P-littoralis_Contig65.106.9|Name=mRNA_P-littoralis_Contig65.106.9|organism=Pylaiella littoralis U1_48|type=mRNA|length=10633bp|location=Sequence derived from alignment at P-littoralis_Contig65:545217..555849+ (Pylaiella littoralis U1_48)
CAGCAGCACAGCAGCGGCGAGACAGCCGAACACAGCACCTAGTGCACATT
GCACATCCGTTCCGGAGCAATGGTGACCATGTGTGCCGCTGTGGTTGTCC
GGGCTGCGGCTGTGGCTAGTCTCTGCCTTGCTGTAAATGGTTTCACGTCA
CCAACAGCAGTTGGTAGCACAGCAGCAGCAGCCGCCAGCAGCCGCTGCTG
CATCTCAACATCACTAGTGCAACAGCAGCAGCGGCCGCCACAGCGGAGCC
GCATAGCACTCCACGCAGCAGTGGGAAGCAGTGAAGACGATGGAATTGAG
GAGTACAAGAAACAGATGGCGGCCTTCATGGCACAGGCGCACGAGAAGCG
CTTGCAGGCTATGGAAGTTGTCAAGGCAGAGGTGCAGCGGGGATATGAGG
AGCAGATAGCTGACCTGCAGTCGAAGGTGAAAACGCATGATCATGTACAG
CAGTTGAGAGCATCTATTATTAAAAGCCGAAAGAGTCCGCGCCGCTGCTC
CTCCTCTTTGCGATGTCATCTCGCACGATATCACACACAGCAGCATTTTT
TTATACTCCGTAACTCGTAGTGCGTCTCGAGCGTGTTTCATCCTCAGCTT
GTATCGCCGGTTTACATTACACACGCTCTCCATTTTTTTGTGTCCTACCT
CCCGACTTCAGTCCACAGTAGTTCCAAGTAAACAGCACTCACGAAGCACC
GGTACTTGTATCATACCTGGTACTCAGTACTTCCTACAACAGCAGTACCG
CTGTACGTCGTCGTGCTCGCAGCAGTTGTATCGTACGAGTGTCAGATGTA
CATGATAAATACCATACGTACATGATACATAATGCTGTATATCATTACTG
TACTGAAGTACCTGGTATTATGTACAAGTTTGAAAACACTATGTACTTTA
AGAGAACTGCCTTCAAACTTAGCTGTAGCCTTCGTTGCTTTCCACCAACC
GACAGCAGCTGGTAGTCTACTCGACGCATACGTAAATACAGCATTCGTTG
CTTTCCACCAGCCTCAAGCAGTACTTCGAATATAGAAGTTACTACGTAAG
GCTGTCGAGATCCTCGTCGAGAGCGAGACGAATCCTCAATATCAACTCTT
GTTATCGACATGAAAAACATAAAAAAGGTAACGTGCCGCTCGAAGGTACA
GCACACCAGTAGTTCCCTCCTTCTCTCCACGGGGCATGTTGATCCTTGTG
ATGTGATGACGTAATCAGCTCGCGAATGCGGTATGCCATGTGCTTCGTAT
CAGACTGCCGTGATTCTTCTGCAAAGAACGACCAACACCCCTTCGCTGCG
GATCCCTCGAACCGCTCAGCCAAAAAGAGCTCGCGCACCCGAGAGGGAGA
GGGGGCGCGCGTGCAAACGCCTCATTTTATTTTCATGACGCCCAACCAGT
ATGGCGTGCGTGTTTGGTGTGCCCTCACTTCGACGCATTATCATAGCGCC
CCGCGGGGGGCACGCAGTGTGAGATACCAATCTGTTCCGTGAGAGCATAC
CGAAGCACGGTGCATGCGGCGACCGAGAGAGCAGTATGCGATGTGATACT
GTCGTTGTCCATCTCTCCAATCAAGCTGTGGTGCCATCGCACCGGGCGGT
TCCTTTTTGCCGCGTATTTTGTGGAAATTCCACGCAGCGCCTCCACAACC
TTATTTCTTGGTTGCCAATATTCTCGGGGAGGCGGGAAAAGCCCCCAGGG
GCGCGGTGTTGAGCTTCGTCCTTCGTCCCCCTTCTTACGGTTGTTGTTGT
TGTTGTCTTCACATTAAAAACCATTCCGATCTCTCCTCAGTACCTTCTAA
TGTCCGTACTCCACCGATCAGGTACGATTTCCGTGGTCACAGGCTGCTTG
CTCAGAAGCGGTATATAGTACTCGGGAGATCCCCTCAGTCCACCGAATAA
AGGCACGACAAGGAGACTCCGGCAAAAACAAAAACGGACCCCGAGAAATC
ACACAACGCTGTACAAAAATAGAACAAGAACGGTGCAGGGTAGATTTGTG
CCGCAAAGCCAGAAACATAGTTCTTCCACCCTGCGTCCTGTGTGAGCTTG
CCGACTAATCAGCCCATTATGTTGCCCTACAACAGGAGTACCTGATTCAT
GAACTGCTGTTCCATTTTTTTTTTCATCCTGCATGCCGCCTTCTGACTGA
GTCATGTGCCGCGGCCGAGCACTGAGTGTCACATCACATTCAACCATTGC
AAGCGCATTCTGCTCTTCATGTGATACGTCGAAAATCCGGTGAGCACGAA
AGTATGATAGGGTGCGAAACGCCTCCTTCTGCGGTTCGGTTCGGTGCTGT
GCGGTGCTGCTTGTTTGCCGCCTGGGTGTGCAAACCTGTTTCGCTTTCCG
CTCCATCCAAAGGTGGCGGGCGGGCGACACACCGGTTCAAGAGCAACCAA
GAGCTATATATTGGTCAGTTGAGTTGACTGATCCCCCGCCACCGCCGCTG
ACGCCCCCGCGATAAACGCCTCCGCTCGCCCCGTTGTTGCTCTCTTCGGG
TGCAGCTCGCGGCTCTGCCTGCTTCTGCTGGTGATGTAGGTGCTGCAGCT
CCAGTTCCGGTGGAGGAACCGCACCTCGTGGGCGCTGGGGCAGGAGGAGC
GGCCATCGAGTCTGCTGGGTCTGCTGTAGGAGCCGGGAGCACAACCACAC
AGCACCCCGGCTATGCAGGTATGCGACTCATACATTTTCTACAGTTTTAC
TTCGAAGTATTAAGGGAAAACTGAATTATCATATGATAGAAGTACCTTGC
TGTTGTCCGCCCGGATGGGAACACTGTCCCATCATGGCCGCCAACGATGT
GCTCCCTCTTTGCACGTTTCTACGCCAGCGGAACGTTGCAGCAATTTTGT
TGGGTTTCCCCAACACACGAAATTTCCGCCGAAATCGCAGCGTCATCTTT
GGCCTTGGCAATGGAACATCAGTACTGCTGTAGCTCTCACACGTTTGGCT
GTAGGCTTCCGCTTGTCTCGACCCCGTGCGTGCATGTCCATCCAAGATCG
GCATCAACGCGCACCGCCAGCACAGATGTATTATGTACGTGTACTGCTGG
ACCGAGTCACCGCCTCGCAGTCTGTTGGAAACGCTCGGTGTCAATCGGTT
ACCTGCGGTTCCGCCCCACTACCTACGTGCAACGTGATGCTGCTGTTGAG
GAGAGACCCTCGTGCCACTGCTGTAGAACCTGACAGCCCCATAAAACCAA
ACAGCAGGAAACCAGGAAGAGCACTTTAACCTTGTCTTTCAATAATAGAA
TTTGGCGGTTAAAACCGCGAATACGTCTGCGACACATTTCCTGCTGTGTT
GGTTTGCTCCCGCCCGGGAACCCGAATATCAATATCAACATTAATTTCAA
TATCAATATCAATACCAATATCAATACCAATACCAATACCAATACCAATA
TCAGACCAATATTAAAATCAATCCCTATATCAATATCAATACCAATACCA
ATACCAATACCAATATTAACACTTATACCAATATCAACACCAATACCAGT
ATCAACACCAATATCAATATCAATATCAATATCAAAACGCAGCCCGCTCG
GCACGACCTGGGTGGGAGGCAAGGTGGGGATCTGAGGAAGTGGCGAGGAC
ATCGTCACCGGTCTCGGCAGCGGACGTGGTTGCCATGGAGGCCAGGGCCA
CGGCAACGGCATCCGACGGCGCGGCGGCTCACCCAGCTTATACCGGTGAC
AACACAGAAGTAGATATAGAGTGACCAACCGGTATAGTCCCAATACGGTG
GTATGGTACAGTATTGCCAGGAGTGCACGGAGTTTACACCGTGCGCCCCA
GGTCTGAGCAGTGAGTTTCTCGCCCCCGGGAGCAAGGGAAGGTGCTGATA
TGCTACAAGTCAGCCAAGGGAATTTTTCTTTTGACTTTTTCGCCTCTGAG
TGAGAGCATCATGCTTTGGAGCACGAGCCGGAGGGCCTGCTGCGCCCTGT
TGCGAGGACTCTGCCTGCACCGCCAGGTTGACGAACGTTTCTCGCGCTGA
GGAGAAGAAAGGAGACGGACCTAATCGCCCCTCGGAAATTCCCCGAAAAT
GCCCGCTCTGCCCTGTCGCTCTCTCTCTCTCTCTCTCTCTCTCTCTCGCC
GCCCTTCTTTATATTTTTTGGGCTCGGATCGTAACGGATCACCGCCTTGT
GTGTTTGTTGGATTTTGCTGCAGCGCGTGCAAAAAGGCCGGGGTGGGAGG
CGCGATGGGGGAGTGAGGAAGTGGCAAGGATCGGAGGAGGCGGTGCGTCT
GGTGCTGCTGGTGCCCCTGCCACAGCCACAGCCACTGCTCCTGCTGCTTC
TGCTGCGGGCTCGCTAGCGGCTGGCACTAGTCATCCTGCGTACGCAGGTA
AGTCAAACTGCATCCTGTCTCCCCTTTTCCGATGCCTCCTATATACAATT
GCGCAAATCACGCATCTATCTGTCAACTTGGTTATTTCGCCCGAGAAGCC
ATGAGTAGCAGTGTCGCACATGAGCACACTGTTCACCCCGGTGGGTCATC
GCCGGATCAGCGCATACGTGTTGTTGCAGGAATGGCTGTGTAGACCTTGA
GCTATCGCGTGTCTCGCCGAGGTGCCACGGTTCGGGACCGGTCGGCATAC
TTCCCGCCAGACTGGCTTGTTCAATGACTAGCCCAACGAATCCTCACTCT
TCAGAGTTCAGTTACGATATAGTCTTCTTCACACACATGTTTCACCCCGT
AGAAGCGTCGGCGCTGCTTTTTGTAGCAAACCAAAAGTAGAGGTGTTCAA
CCCGCAGGGGAGGAGCTACCGGTAATGTCACGACAGCGACGTGGATATTT
CGCGTAGGCTAGGGAGCTAGGGAGCATTCACCAGCCACGACCTCGCTAAT
TTATCGTCCCACCTCAAACCCTTTTGGGGCCATGCTGTTCCTTCCTTTCT
TCTGTCCTTCCTTTCTTCCTTCCTTCCATGTGCGCGTTGCCCCGCGTTAT
CATAGCTCGCGCACAGCGGCCGGGTTGGGAGGCGCGGTGGGGGAACGAGG
AAGTGGGAAGGGCGGGAGGAAACGTGCTTGCAGCTGCTCCTGCTCCTGCT
GCTGTTGCTGCTGCTGCTGTTGCTGCTGCTGCTGCTGCTGCTGCTGCTGC
TGCTGCTGCTGCTGAAGTAGAGGGTAATGTACACCCTGCTTATGCAGGTA
GGCTACCTGGCGTGCCATAGCCTATCGTGGGGTTGCGTTGCCAAGGGCGG
CTCTTTTTTTTCGCTTTACTACTGTCACCGTGAGCGCTACTGCCGAGAAA
ATAGAATACACCCCACAGCTCTCGCTCGAGCAGGCTATCGTTAATGGGCT
TCTCCTTTCGATATTTATATTTGCTTTTGGTACTTTTTTGTTTTACATCT
CGTAGCGATGCTTCTCAGACATAAGACACCCGACTTGAAACCCTCCGCCC
AAGAAAAGGCAGACAAGATAAGATAAGATGAGACACGACACGGCAATTTC
TCAACCTTCCTGCCGATCTTCCACCATGTTACCGTGCATGGGTCACCCAA
GATACCTCGGGAGCCCAGAATAGACCAATTTTAAAGTCCCTTGTCCACAG
CCAAAGCGTGTTTCAATGTAAAACAGTTCGTGTCGGAAAGCTACGTAACA
CTCGACGAGACAGATGGTGCCATGGTTTTAACACCGACTGGTCGCCCTCC
TCGATACCGACAGCATCAACGCGACACTCTGGCTCGCTGCTGTGTAGTAG
GGCTTTGAATATCGCCCTGCGAGGGGGGGGGGTCATCCTCTGCGACCCTC
ACATCAACAGGAGTTTATCTGCCTCCGTCCATCCGCCCGCCTGCCCAAGG
GTCGGCATAGACGACCAACCTCCCTCTCCCTTGCAGCTGTATTCCCAAGC
TTGCGCCCGCGCTGTGACCGGTATCATACGTACGTTACAACCCCCGCGCG
CGTGTTGCACTTGCCGCTCTTCGTTCCAGCTCGCACGCAGAGGCCCGGGT
GGGAGGCGAGGTGGGGGAACGAGGAGCCGGCCAGGATGGCGGCGACTGTA
ACTTCAACTTCAACTTCAACTTCACCCCCGGCCGCTGTGCCCGCAGCAGC
AGTAGCAGCAGCAACCACCACCCCGGTAGACTCACACCCGGCTTACGCGG
CTCGGTCGAGGCGACCGGGCTGGGAAGCCAGGTGGGGCAGCGAAGAAAAG
GACCGCATGGCGGGGGCGGCTGCGGGAGCGGTCGCGGCCGCAGGGGCTGC
AGCCGGTTTCGCCACCGCTGGCGGCTTGGATGCCGCCACTCCTGCTTCTG
CGAGTGCGAGCGCGAGCGCGAGCTCGGGGATGGACCGTGCGGAGGACCCG
CTGGCGGACGACTTTATGCCGGACGACGTTGGCGAGCTTCAGAGTATGGT
GAGATACAGAGAGGCGAGGGTAGGGTGGGTCCGTGGTGCGATCGGTACAA
CAGAGTGCAGCAGTAGATGCCGCTAGTCCGTCGTGCAGCTGTCTGTCGTT
GTTCGTAGAGTGAGTGACACTCTTAAGACTCTCATCGCACGGGACGACAG
AATCTTAAGCATTACTCTTGGTGCGCGCGGCTGTATTTATTTCTCCGTGC
ATCAGCACATGCCCACTCTCTTTTATGTACGAGGCATAGGTCGTGCCTTT
GGCATCGCAGCGCAATGTCTTGGGGTACGGCGGTGGGGGTAGTGTTGCGA
TACGGGTGTTCGCCTTCTCTCTCACCAAAACAGCAGTTGGTGGCAATCTG
AAGGCACCTGTTGGTTTCTCTCGTTCCGTTTCATTTTGCGTTGTTGCGTT
TTGCGTTGCAGGTGTTGTCGAACCGGCGATATTTCCAGGAATATCTCCTC
AAGTCCCTGGAGGCGAGCAACGAAGTCAAGCAGTCAAAGGCAAAGATCGA
GGCGGAACTATCCAGGTGCAGCAACATGCACACTTCGTTGCGGAATAGTC
TAACCCACCGCGCTACGGCTGCGCCAGACAGCGTTGACTTTCAGCCCGTC
AGCAACATCACCAGTGTGTCATTTTTTTTATAACGCTGTAGTGGTGACCG
TGGGCGCTGCTGGTCAGTTTCCACCTTGGTTTGCATTTGTTCGGTGTGCA
TCGGCTTGATAGAAAATCAACTTAGTTGTCTGCTTCACATCAAACCCGAC
GGAGGCTTGTTGGTCTTTTTTTTTCACGGGTTTTCCTCACCACGAAATTT
CCACGAAATTTCCACGGTACTCGGGATGCGGACGCGAGGCGTGTCAGGTT
TCGTAATCACTCATCCAGCATGCTTTTCTTTCGCCCTATCGCAACACTTT
TTTTGGCGGCCGTATTTGACCATTCGATGCCTCCCGCCGGCGCATGTGTC
CAGCGCGCACAAACTGTAAAAGAAAACTCTTATTAACGTGTTGATGTGCT
ATTTGTCCCCCTCGCCATCGACTCAGCGAATGATATCGTTCACATCATCT
CGTGCCCCTTTCCGTCTCCACCGGCTGTACCGCTGTGCCGCATGCCACGT
TGCTCGTTTATTAAGTTCGAACGCGAAGCTTGCGGCCGAGCAGCAGCTGA
GGGAGAGCCTGCAGGAAAGTTTCCTCGAGTACATGAGCCGGTAAGCCAGG
CCGTGAAATCACAACAGATACATGAAATATGGCCTTCAAACATTTCACCA
TTTCTACATACCTTCCTCCTGCTGTGTTGACCTCACGTCGGCTGGTGCGC
TCATCAGCTTGTCCCGGAAGGTGTCGACTGGCGTTCAGAATTGAGGGGAT
GACAACACAACACACACAGTATAATACTGTAATGAATCTATCGGGGTTTT
TTTCAGATGGAGAGGACATTGGTGTACTCCCGGCAAGGAAAAAATGTGAT
TCATTCTACGATTGCTTGGATGCTATAAGTATGTACCCATGTAAACACCG
AAGATTGTGTTGACACTCTGGATTGACGTCGGCACAAGTATTTCGGCCGC
ACCTGAAAGTACCATTTCTACAGTAGTACAGTAGTGTAGCAGTAGCGGTG
TTACCGCACTACGATGCGAGTCTACCGCAGGTGTGGTTTTATACGGAGTA
CATGTGAAATCGTTTCAATGAGCCTGGCGCCTGCGTCAGTCACAGCCTTC
AGATTAGACCAAGCCTTGCCTTGTGTGCCGCAGTGAGAGGCTGCGTTTTC
GGCGTTGCGTGTGTCGTGGTTTTTTGTGTTGTGTTCGCAGCCGATGGTGG
TGCGGGTGCGTCGCTGTTTGCTCACACGGCGTGGTACGTAGCACACTTTG
GTGACGGCAAAATTGTCAGCTAAGGTATGTCATGAAAAGGATACTAGAAG
TGAGAGTGGCTTTGGGCGGTTTTGGTCCGTACGGGACCTCCCCCCCCCCC
TCGCAGAGCCCCCCCCTCCACCGGTGTGGTTTTTCCCTGATACCAGGCGT
GCGTATGTCGTGCCCCCTCGCTGATTCATGACTACCCACCCCCGACCGCC
GCTCTCGTGCATCGTGTGGGGTGTGGGTGGAACAGGAGCGGTGATGCCGG
GGCGAGCGGTAAGACCCGCATCGCCGAGCTCGAGAAAGAAACGGCCAGGC
TCGCCGCTCAGGCGGAAGAGCTCCAGCTCTACACTCAAGAGTACATGGTG
AAAGCTTCCAGCGAAAAGCAGAAGGTGGGATCGAGATTCGCCGTCGGTGT
TCCTGGCCTTTGATTCCATACTCTTCCCACGATCCTGCCATGCAGCAAGC
TCTTGGGTGTGAAATTGGCGTGCATACTTAGCTGCAAGAATATTGCGATT
AGGTACGATACCGTCATGAGTCCTCTCTGGAGATTGTCCATTGCTATTTC
GCGTGCAACTCCGGCCTGGTTTGCATGTCGCGTTGTATAGCGGCGTGCAC
ACGGGAGAGCACCCAGCGCTCGTCGATCACGACCACATGCGCGGTCCTCG
CCGAACTCACTCACTGCAGTTTCGTACCAGTCTCGTTGTGTGACGTCACG
CAGGTTGCTGTGCCGCGTCACAAAAAGATTGCGAGTGAATGTGTGTCGTC
CTCCATCATTCGAGTATCATTTCTTGAGTCCTGTTTCTTGCGTCGCCCAA
CCCGCTGCAACAATCGTGGTGGTGTTTGCACCGCTATCTACGGGCGTAAA
TAAATGATTTACCATTCTTGTATCGCCCAATCATTTGTCAGTCCCATCGT
CCGCTGACGAACGTGGTTGTGCCTGCACCGCGGTCTATGAGCGTAAATTG
ATGGCACCAGAGTACTGCATCGTCCAATCATGGGTCCGAAGTCTCCATCC
GCAACGAGCGTGGTCGTGTTTGCACCGCTTTTTCTCAAACAACCATTGTC
GGTTGAATAGATGCGTTGCGCGGGCGGCACAGGTATGCTCGCACAAGCCA
TTCGACGTGGTTTCGAATGAATTGCTGTGCTTGGTTCAGATTTTTACCAC
GGTAAGACTCGTTTCGCCTTTTCTTTTTTGCTTCTAGGTTCTCCCACCAT
GCGCTTTATTCTCATTTCTTGAAAGAAAAAATATATACTCTCACGAAAAC
GTCGAAGAAAAAAGCAAAAAGTGTCGCCTACCGTAAATGGTACCCGGTGG
GACTCCGATGTGTTTCTAGAGTTCCTCCTTCTCTGACAATCTCTCGGTTT
CACTCGGCGACGTGTGCGTGCAGGCCATCGAAGCGGCAACCGCCAGCGCA
CGCGCCCAGTCGGCCGAGCGCATCGCTGCGTTGCAGGCGCACGTTTTGGA
GCTGCAGGCGGGGGGCTGATTTGGCCCGATGGTCCCCGCCCACCCCAAGA
TTTTTACGTAGTCGATGCTGTTGCAGTTCATCATTCTCATGTATCGCCGT
AAAAATGTTCCTTGGTTGCTGGGAACGATAGTGTTACTGCTGGCGTATCC
TGGTAGGATACATGTGTTGGGGGTGGGGGTGGGATACATGCAGCATTTGC
GTGAGTGCGACGCTTTTGGAAGGGGCGCTGGTGGTACTGCATCATTTGAT
AAGCGGTGTCTACAGAGTAAATAGCTTGACTAGATAGCTAAGTTTCATAC
ACATGTTACATATTGCGTTTGCTACCCGGGTGTGGGTATTGAGATTGAAG
AGAATACTCCGTGTAAAGTTCTCCTCAGTTGACCGGCCTTGGCGTATACG
AAGTACTCTGGATGTATATATGATGGCGTATGCGTCTCGAGGTTGTTGAA
ATTCTCACCTTGCTTTCGCGAATACCTTGTCACGGCCAGGATTGTTGGTA
CGACAACGGCACAAGCATCATTGCAGAACAATTAATTGGTGAATAAAGAG
GTCGGAACGCCATGAGCAAACATAACATTGGACATTTGGTTGTGTGGCTT
CAGGAGTTCCATGTTGCTCAGGTTCGCCGTAAGCCTTTAATACTGCTGTA
TGCGTTTTGCTGCTCATAGCGGGGTTCGGGATTGTTGGAGGGAGAACGAA
TGCGCCGAAACAACACGTCTTTCGAAATAACGTTGCATCAACGTGTTGTA
ACCGTATGATGAAAGGTAGGCATGTCTACGAAGGCAACACCGCAGGTGAC
TTGGCGTATAATATCACCACCATTTATTTTAGGACCAGTGGCGGGTTCCG
AGCTAAAGCCGAATTGCCTCTCCGGGCACGAATAAAACAAATTAAAAAAA
ATCGACTTCGGGAATCGTTCTGAAACGCCCAAATATAATGTTTAAAAAAA
GGTCCAAAAAAAAAAAGTTCCCCTTCGCCTCGA back to topCoding sequence (CDS) from alignment at P-littoralis_Contig65:545217..555849+ >mRNA_P-littoralis_Contig65.106.9 ID=mRNA_P-littoralis_Contig65.106.9|Name=mRNA_P-littoralis_Contig65.106.9|organism=Pylaiella littoralis U1_48|type=CDS|length=2016bp|location=Sequence derived from alignment at P-littoralis_Contig65:545217..555849+ (Pylaiella littoralis U1_48)
ATGGTGACCATGTGTGCCGCTGTGGTTGTCCGGGCTGCGGCTGTGGCTAG
TCTCTGCCTTGCTGTAAATGGTTTCACGTCACCAACAGCAGTTGGTAGCA
CAGCAGCAGCAGCCGCCAGCAGCCGCTGCTGCATCTCAACATCACTAGTG
CAACAGCAGCAGCGGCCGCCACAGCGGAGCCGCATAGCACTCCACGCAGC
AGTGGGAAGCAGTGAAGACGATGGAATTGAGGAGTACAAGAAACAGATGG
CGGCCTTCATGGCACAGGCGCACGAGAAGCGCTTGCAGGCTATGGAAGTT
GTCAAGGCAGAGGTGCAGCGGGGATATGAGGAGCAGATAGCTGACCTGCA
GTCGAAGCTCGCGGCTCTGCCTGCTTCTGCTGGTGATGTAGGTGCTGCAG
CTCCAGTTCCGGTGGAGGAACCGCACCTCGTGGGCGCTGGGGCAGGAGGA
GCGGCCATCGAGTCTGCTGGGTCTGCTGTAGGAGCCGGGAGCACAACCAC
ACAGCACCCCGGCTATGCAGCCCGCTCGGCACGACCTGGGTGGGAGGCAA
GGTGGGGATCTGAGGAAGTGGCGAGGACATCGTCACCGGTCTCGGCAGCG
GACGTGGTTGCCATGGAGGCCAGGGCCACGGCAACGGCATCCGACGGCGC
GGCGGCTCACCCAGCTTATACCGCGCGTGCAAAAAGGCCGGGGTGGGAGG
CGCGATGGGGGAGTGAGGAAGTGGCAAGGATCGGAGGAGGCGGTGCGTCT
GGTGCTGCTGGTGCCCCTGCCACAGCCACAGCCACTGCTCCTGCTGCTTC
TGCTGCGGGCTCGCTAGCGGCTGGCACTAGTCATCCTGCGTACGCAGCTC
GCGCACAGCGGCCGGGTTGGGAGGCGCGGTGGGGGAACGAGGAAGTGGGA
AGGGCGGGAGGAAACGTGCTTGCAGCTGCTCCTGCTCCTGCTGCTGTTGC
TGCTGCTGCTGTTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTG
CTGCTGAAGTAGAGGGTAATGTACACCCTGCTTATGCAGGTAGGCTACCT
GGCGGTCGGCATAGACGACCAACCTCCCTCTCCCTTGCAGCTGTATTCCC
AAGCTTGCGCCCGCGCTGTGACCGGTATCATACGTACGTTACAACCCCCG
CGCGCGTGTTGCACTTGCCGCTCTTCGTTCCAGCTCGCACGCAGAGGCCC
GGGTGGGAGGCGAGGTGGGGGAACGAGGAGCCGGCCAGGATGGCGGCGAC
TGTAACTTCAACTTCAACTTCAACTTCACCCCCGGCCGCTGTGCCCGCAG
CAGCAGTAGCAGCAGCAACCACCACCCCGGTAGACTCACACCCGGCTTAC
GCGGCTCGGTCGAGGCGACCGGGCTGGGAAGCCAGGTGGGGCAGCGAAGA
AAAGGACCGCATGGCGGGGGCGGCTGCGGGAGCGGTCGCGGCCGCAGGGG
CTGCAGCCGGTTTCGCCACCGCTGGCGGCTTGGATGCCGCCACTCCTGCT
TCTGCGAGTGCGAGCGCGAGCGCGAGCTCGGGGATGGACCGTGCGGAGGA
CCCGCTGGCGGACGACTTTATGCCGGACGACGTTGGCGAGCTTCAGAGTA
TGGTGTTGTCGAACCGGCGATATTTCCAGGAATATCTCCTCAAGTCCCTG
GAGGCGAGCAACGAAGTCAAGCAGTCAAAGGCAAAGATCGAGGCGGAACT
ATCCAGTTCGAACGCGAAGCTTGCGGCCGAGCAGCAGCTGAGGGAGAGCC
TGCAGGAAAGTTTCCTCGAGTACATGAGCCGGAGCGGTGATGCCGGGGCG
AGCGGTAAGACCCGCATCGCCGAGCTCGAGAAAGAAACGGCCAGGCTCGC
CGCTCAGGCGGAAGAGCTCCAGCTCTACACTCAAGAGTACATGGTGAAAG
CTTCCAGCGAAAAGCAGAAGGCCATCGAAGCGGCAACCGCCAGCGCACGC
GCCCAGTCGGCCGAGCGCATCGCTGCGTTGCAGGCGCACGTTTTGGAGCT
GCAGGCGGGGGGCTGA back to top
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