mRNA_P-littoralis_Contig65.103.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig65.103.1 vs. uniprot
Match: A0A6H5JGY9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JGY9_9PHAE) HSP 1 Score: 218 bits (555), Expect = 3.270e-66 Identity = 115/211 (54.50%), Postives = 151/211 (71.56%), Query Frame = 3
Query: 180 RNTTNNTDFDGKIGLYPFTRQEAAQRNSRNRAAGTIVTKTVEVTKERYKKMMLDHVIPDIKSRFPRPPANASAEDKIVWIQQDNARPHLINNDPEVRAAMQVDGWDIRLINQPANSPDTNILDLGFFNSIQSLQDRTTPRTVDDLVKAVKEAWQQNSGVKLNRVWLSLQACLQEIMLAGGDNDYKLPHVRKGRLETAG-TLPWQLECTAEA 809
R T +F GK+G++ FT Q AAQRNSRNRAAGT+ TK VEVTKE +K+ ++D V P IK+R+P + ++IQ DN H IN DP+V AA DGWDIRLINQP+NSPDTNILDLGFFN++QSLQDR TPRTVD+ + VK A+++ S ++VW+SLQA LQ I+LA G+N +KLPH++K +G ++P +L +AEA
Sbjct: 80 RKTNRCCNFTGKLGIFQFTVQRAAQRNSRNRAAGTMETKCVEVTKEVFKRKVVDEVFPAIKARWP------GGRGRTIYIQLDNKPSHRINADPDVVAAGIADGWDIRLINQPSNSPDTNILDLGFFNAVQSLQDRNTPRTVDEFITEVKRAFEEQSPSTHDKVWVSLQAILQ-IILAKGNNTFKLPHLKKDNAANSGRSIPKELPLSAEA 283
BLAST of mRNA_P-littoralis_Contig65.103.1 vs. uniprot
Match: A0A8I6WKB7_HORVV (Uncharacterized protein n=1 Tax=Hordeum vulgare subsp. vulgare TaxID=112509 RepID=A0A8I6WKB7_HORVV) HSP 1 Score: 211 bits (537), Expect = 3.760e-64 Identity = 112/236 (47.46%), Postives = 156/236 (66.10%), Query Frame = 3
Query: 111 EPASPTQEPHHQGGV--LGAVARPRRNTTNNTDFDGKIGLYPFTRQEAAQRNSRNRAAGTIVTKTVEVTKERYKKMMLDHVIPDIKSRFPRPPANASAEDKIVWIQQDNARPHLINNDPEVRAAMQVDGWDIRLINQPANSPDTNILDLGFFNSIQSLQDRTTPRTVDDLVKAVKEAWQQNSGVKLNRVWLSLQACLQEIMLAGGDNDYKLPHVRKGRLETAGTLPWQLECTAEAW 812
EP Q G V L AVARP+ ++ N F GKIG++PF ++ AQR S NR GT+ TK+++V ++ ++ M+++++P I+S +P A + ++I+QDNA+PH++ NDPE A++ G DIRLI QPANSPD N LDLGFFNS+QSL D +PRT+ DL+K V E ++ KLNRV+LSLQAC+ EI+ G N YK+PHV K RLE+ G LP +L C E +
Sbjct: 29 EPTRTIQSGASIGNVMFLTAVARPKWDSEGNVTFSGKIGIWPFVKEIPAQRKSDNRPRGTMETKSIKVNRQVMREFMIENLLPAIQSSWPDNDAG-----QTIFIKQDNAKPHILPNDPEFLVAVESTGLDIRLIQQPANSPDLNGLDLGFFNSLQSLTDCLSPRTLQDLIKGVLEEFENYEVYKLNRVFLSLQACMIEILNHAGGNGYKIPHVNKERLESLGLLPQRLTCPQEVY 259
BLAST of mRNA_P-littoralis_Contig65.103.1 vs. uniprot
Match: A0A834FW95_RHOSS (Uncharacterized protein n=3 Tax=Rhododendron simsii TaxID=118357 RepID=A0A834FW95_RHOSS) HSP 1 Score: 212 bits (539), Expect = 2.180e-62 Identity = 110/221 (49.77%), Postives = 153/221 (69.23%), Query Frame = 3
Query: 156 LGAVARPRRNTTNNTDFDGKIGLYPFTRQEAAQRNSRNRAAGTIVTKTVE-VTKERYKKMMLDHVIPDIKSRFPRPPANASAEDKIVWIQQDNARPHLINNDPEVRAAMQVDGWDIRLINQPANSPDTNILDLGFFNSIQSLQDRTTPRTVDDLVKAVKEAWQQNSGVKLNRVWLSLQACLQEIMLAGGDNDYKLPHVRKGRLETAGTLPWQLECTAEAWE 815
L AVARPR +F GKIG++PFT +E A+R S+NR AGT+ TK V VTK+ + +++ VIP I+S++ + S+ + ++IQQDNARPH+ ND E A +G+DIRL NQPANSPD N+LDLGFFN+IQSLQ + PRT+D LV AV++++ + +L+ V+LSLQAC+ E+M G N+YKLPH++K +L G LP+QLEC + E
Sbjct: 218 LAAVARPRFGANGCEEFSGKIGIFPFTVKEPAKRTSKNRLAGTMETKAVAAVTKDVIRSYLIEKVIPAIQSKW-----HQSSVGETIYIQQDNARPHIKPNDVEFHEAATRNGFDIRLTNQPANSPDLNVLDLGFFNAIQSLQHQEAPRTIDQLVNAVEKSFDKLPSRELDSVFLSLQACMVEVMKVNGGNNYKLPHIKKPQLRRDGVLPFQLECGRDVME 433
BLAST of mRNA_P-littoralis_Contig65.103.1 vs. uniprot
Match: UPI000E6FC7BC (uncharacterized protein LOC113359119 n=1 Tax=Papaver somniferum TaxID=3469 RepID=UPI000E6FC7BC) HSP 1 Score: 206 bits (523), Expect = 3.260e-62 Identity = 109/217 (50.23%), Postives = 148/217 (68.20%), Query Frame = 3
Query: 156 LGAVARPRRNTTNNTDFDGKIGLYPFTRQEAAQRNSRNRAAGTIVTKTV-EVTKERYKKMMLDHVIPDIKSRFPRPPANASAEDKIVWIQQDNARPHLINNDPEVRAAMQVDGWDIRLINQPANSPDTNILDLGFFNSIQSLQDRTTPRTVDDLVKAVKEAWQQNSGVKLNRVWLSLQACLQEIMLAGGDNDYKLPHVRKGRLETAGTLPWQLECTA 803
L VARPR ++ NN +F GKIG++PFT QE AQRNS+NR AGT+ TK + VTK+ + +++ V+P I+S++PR S+ + ++IQQDNARPH+ ND E DG+DIRL QP NSPD N+LDLG+F +IQSLQ R P T+D+LV+AV+E+++ S LN V+L+ Q C+ E M G N+YK+ H+ K RL G LP QLEC A
Sbjct: 33 LAVVARPRYDSANNEEFSGKIGIFPFTFQEPAQRNSKNRTAGTMETKAILSVTKDVIRSCLINKVLPAIRSKWPR-----SSNMEPIFIQQDNARPHINPNDQEFLEDASKDGFDIRLSFQPPNSPDFNVLDLGYFRAIQSLQYRYAPSTIDELVQAVQESFENLSSKNLNYVFLTFQGCMIESMKQLGGNNYKVSHMAKDRLARNGNLPIQLECDA 244
BLAST of mRNA_P-littoralis_Contig65.103.1 vs. uniprot
Match: A0A452XZT7_AEGTS (Uncharacterized protein n=2 Tax=Aegilops tauschii subsp. strangulata TaxID=200361 RepID=A0A452XZT7_AEGTS) HSP 1 Score: 208 bits (530), Expect = 5.430e-62 Identity = 105/219 (47.95%), Postives = 149/219 (68.04%), Query Frame = 3
Query: 156 LGAVARPRRNTTNNTDFDGKIGLYPFTRQEAAQRNSRNRAAGTIVTKTVEVTKERYKKMMLDHVIPDIKSRFPRPPANASAEDKIVWIQQDNARPHLINNDPEVRAAMQVDGWDIRLINQPANSPDTNILDLGFFNSIQSLQDRTTPRTVDDLVKAVKEAWQQNSGVKLNRVWLSLQACLQEIMLAGGDNDYKLPHVRKGRLETAGTLPWQLECTAEAW 812
L AVARPR + N F GKIG++PF ++ +AQR S NR GT+ TK+++V ++ ++ M+++++P I++ +P A + ++IQQDNA+PH++ NDPE AA++ G DIRLI QP NSPD N L+LGFFNS+QSL D +PRT+ DL+K V + ++ KLNRV+LSLQAC+ EI+ G N YK+PH K RLE G LP +L C E +
Sbjct: 132 LTAVARPRWDNEGNVTFSGKIGIWPFVKEVSAQRRSDNRPRGTLETKSIKVNRQVMREFMIENLLPAIQASWPENDAG-----QTIYIQQDNAKPHILPNDPEFVAAVERTGLDIRLIQQPVNSPDLNGLELGFFNSLQSLTDCLSPRTLQDLIKGVLDEFENYEVYKLNRVFLSLQACMIEILNHAGGNGYKIPHANKERLENLGMLPPRLTCPREVY 345
BLAST of mRNA_P-littoralis_Contig65.103.1 vs. uniprot
Match: UPI0007F012D1 (uncharacterized protein LOC108203813 n=1 Tax=Daucus carota subsp. sativus TaxID=79200 RepID=UPI0007F012D1) HSP 1 Score: 206 bits (525), Expect = 3.210e-61 Identity = 113/228 (49.56%), Postives = 150/228 (65.79%), Query Frame = 3
Query: 156 LGAVARPRRNTTNNTDFDGKIGLYPFTRQEAAQRNSRNRAAGTIVTKTVE-VTKERYKKMMLDHVIPDIKSRFPRPPANASAEDKIVWIQQDNARPHLINNDPEVRAAMQVDGWDIRLINQPANSPDTNILDLGFFNSIQSLQDRTTPRTVDDLVKAVKEAWQQNSGVKLNRVWLSLQACLQEIMLAGGDNDYKLPHVRKGRLETAGTLPWQLECTAEAWEKGAAVLE 836
L AVARPR F GKIG++PFT E A+RNS+NR AGT+VTK E +TKE+ K +++ VIP I +++P+ + + IQQDNA+PH+ N+ E A DG+DIRLI QP NSPD N+LDLGFF SIQ LQ P T+++LV AVK+++ + KLNRV+L+ Q C++EIM GDNDYK+PH+ K RLE GTLP Q+ C ++ A LE
Sbjct: 144 LAAVARPRNG------FSGKIGIFPFTFIEPAKRNSKNRVAGTMVTKVDESITKEKVKSCLIEKVIPAIHAKWPQGM-------RTIIIQQDNAKPHIDCNNAEFMQAASKDGFDIRLICQPPNSPDLNVLDLGFFRSIQDLQHEKAPTTIEELVAAVKQSFDEYPVEKLNRVFLTQQTCMKEIMKFKGDNDYKIPHMGKDRLEREGTLPLQIRCESDLVNDVVAYLE 358
BLAST of mRNA_P-littoralis_Contig65.103.1 vs. uniprot
Match: A0A485KBU5_9STRA (Aste57867_2438 protein n=2 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KBU5_9STRA) HSP 1 Score: 209 bits (531), Expect = 8.420e-61 Identity = 106/226 (46.90%), Postives = 149/226 (65.93%), Query Frame = 3
Query: 156 LGAVARPRRNTTNNTDFDGKIGLYPFTRQEAAQRNSRNRAAGTIVTKTVEVTKERYKKMMLDHVIPDIKSRFPRPPANASAEDKIVWIQQDNARPHLINNDPEVRAAMQVDGWDIRLINQPANSPDTNILDLGFFNSIQSLQDRTTPRTVDDLVKAVKEAWQQNSGVKLNRVWLSLQACLQEIMLAGGDNDYKLPHVRKGRLETAGTLPWQLECTAEAWEKGAAVL 833
L AVARPR N + FDGKIG + FT AQRNSRNR +GT+VT V V+++ Y+ M++++VIP IK+++P A + IQQDNARPH+ D V AA + DGWDI + QP NSPD N+LDLGFF +IQSLQ+RT RT+D+L+ A AW LN +L+LQ+C+ E + +GG+N+YK+PH++K + G LP +EC + ++ G A++
Sbjct: 205 LSAVARPRWNYNKDEWFDGKIGTWHFTEVVPAQRNSRNRPSGTLVTVPVNVSRDTYRDMLVNNVIPAIKNKWP------DARTSCIVIQQDNARPHVTTTDKGVLAACKADGWDIAMECQPPNSPDLNVLDLGFFRAIQSLQERTRCRTIDELIAATLSAWVSVDASTLNANFLTLQSCMVETIRSGGNNNYKVPHMKKAPMMKQGRLPDAIECPRDVFDHGLALM 424
BLAST of mRNA_P-littoralis_Contig65.103.1 vs. uniprot
Match: A0A6A4ZY01_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A6A4ZY01_9STRA) HSP 1 Score: 205 bits (522), Expect = 2.340e-60 Identity = 113/248 (45.56%), Postives = 152/248 (61.29%), Query Frame = 3
Query: 93 RQRACPEPASPTQEPHHQGGVLGAVARPRRNTTNNTDFDGKIGLYPFTRQEAAQRNSRNRAAGTIVTKTVEVTKERYKKMMLDHVIPDIKSRFPRPPANASAEDKIVWIQQDNARPHLINNDPEVRAAMQVDGWDIRLINQPANSPDTNILDLGFFNSIQSLQDRTTPRTVDDLVKAVKEAWQQNSGVKLNRVWLSLQACLQEIMLAGGDNDYKLPHVRKGRLETAGTLPWQLECTAEAWEKGAAVLE 836
+QRAC + HH L AVARPR + T FDGK+G + FT AQR S R AGT V KTV VT+E YK M++D IP I++++PR + K V IQQDNA+PH+ +D +V AA + DGWD+ ++ QP NSPD N+LDLGFF +IQ+LQ +++++V A AW S LN+ +L+LQ CLQE++L G NDYK+ H+RK L G LP + C +AW G A L+
Sbjct: 117 KQRAC-------KSKHHLVMFLTAVARPRWDETCGEWFDGKLGTWHFTEIVPAQRRSSRRDAGTPVMKTVSVTRETYKAMLVDKDIPAIRAKWPR------GDTKAVKIQQDNAQPHVPPSDVDVVAACKADGWDMEVVFQPPNSPDLNVLDLGFFRAIQALQTEKHSSSLEEIVAATDAAWDVVSTKTLNKNFLTLQRCLQEVILNKGGNDYKIAHMRKDVLHARGKLPEMVSCDRDAWSFGCAYLD 351
BLAST of mRNA_P-littoralis_Contig65.103.1 vs. uniprot
Match: UPI00125DF384 (uncharacterized protein LOC116015901 n=1 Tax=Ipomoea triloba TaxID=35885 RepID=UPI00125DF384) HSP 1 Score: 205 bits (522), Expect = 3.090e-60 Identity = 109/228 (47.81%), Postives = 153/228 (67.11%), Query Frame = 3
Query: 156 LGAVARPRRNTTNNTDFDGKIGLYPFTRQEAAQRNSRNRAAGTIVTKTVE-VTKERYKKMMLDHVIPDIKSRFPRPPANASAEDKIVWIQQDNARPHLINNDPEVRAAMQVDGWDIRLINQPANSPDTNILDLGFFNSIQSLQDRTTPRTVDDLVKAVKEAWQQNSGVKLNRVWLSLQACLQEIMLAGGDNDYKLPHVRKGRLETAGTLPWQLECTAEAWEKGAAVLE 836
L AVARPR ++ N FDGKIG++PF +EAA+R S+NR AGT+VTK +E V KE +K ++D+V+P I++++ + + K ++IQQDNARPH+ ND E A Q DG+DIRL QP NSPD N+LDLGFF +IQSLQ + PR VD+LV A ++A+ S L+ V+L+LQ C+ E+M G N+YK+PH+ K +LE G LP + C E + + L+
Sbjct: 187 LCAVARPRFDSGRNEMFDGKIGIFPFIYKEAAKRRSKNREAGTLVTKPIESVNKEVTRKWLIDYVLPAIRAKW------SLSSSKSIFIQQDNARPHISVNDAEFLEAAQKDGFDIRLTCQPPNSPDMNVLDLGFFRAIQSLQYQEAPRNVDELVVATQKAFDDISIESLSNVFLTLQLCMVEVMKRFGGNNYKIPHINKQKLEREGRLPTTISCDMEVLNEAISSLQ 408
BLAST of mRNA_P-littoralis_Contig65.103.1 vs. uniprot
Match: UPI0019D5B331 (uncharacterized protein LOC120641424 n=1 Tax=Panicum virgatum TaxID=38727 RepID=UPI0019D5B331) HSP 1 Score: 207 bits (526), Expect = 2.120e-59 Identity = 107/225 (47.56%), Postives = 144/225 (64.00%), Query Frame = 3
Query: 141 HQGGVLGAVARPRRNTTNNTDFDGKIGLYPFTRQEAAQRNSRNRAAGTIVTKTVEVTKERYKKMMLDHVIPDIKSRFPRPPANASAEDKIVWIQQDNARPHLINNDPEVRAAMQVDGWDIRLINQPANSPDTNILDLGFFNSIQSLQDRTTPRTVDDLVKAVKEAWQQNSGVKLNRVWLSLQACLQEIMLAGGDNDYKLPHVRKGRLETAGTLPWQLECTAEAWE 815
H+ L AV +PR + N FDGKIG++PF R+E AQR S NRA GT+VTKT++V ++ + M+ V+P I + +P+ A K +WIQQDNAR H++ ND + A+ G DIRL+NQPANSPD N+LDLGFF S+QS TT +D+L+ V++A+ L V+L+LQ CL EIM AGG N YK+PH+ K RLE G+LP L C + E
Sbjct: 328 HKVMFLTAVTKPRYDNAGNCTFDGKIGIWPFVRKEPAQRRSGNRARGTLVTKTMKVDRDTIRSYMISKVLPAIVACWPKEDAG-----KTIWIQQDNARTHVLVNDEQFARAVAQTGLDIRLMNQPANSPDMNVLDLGFFASLQSFTYTTTSTNIDELIANVEKAYWDYDASNLRNVFLTLQGCLIEIMKAGGGNKYKIPHMNKERLEAMGSLPKSLNCDLQLIE 547 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig65.103.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig65.103.1 >prot_P-littoralis_Contig65.103.1 ID=prot_P-littoralis_Contig65.103.1|Name=mRNA_P-littoralis_Contig65.103.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=262bp MVLHLQCEAEVLRARQRACPEPASPTQEPHHQGGVLGAVARPRRNTTNNTback to top mRNA from alignment at P-littoralis_Contig65:534814..535649- Legend: UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig65.103.1 ID=mRNA_P-littoralis_Contig65.103.1|Name=mRNA_P-littoralis_Contig65.103.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=836bp|location=Sequence derived from alignment at P-littoralis_Contig65:534814..535649- (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig65:534814..535649- >mRNA_P-littoralis_Contig65.103.1 ID=mRNA_P-littoralis_Contig65.103.1|Name=mRNA_P-littoralis_Contig65.103.1|organism=Pylaiella littoralis U1_48|type=CDS|length=786bp|location=Sequence derived from alignment at P-littoralis_Contig65:534814..535649- (Pylaiella littoralis U1_48)back to top |