mRNA_P-littoralis_Contig646.27.1 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig646.27.1
Unique NamemRNA_P-littoralis_Contig646.27.1
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
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BLAST of mRNA_P-littoralis_Contig646.27.1 vs. uniprot
Match: A0A6H5JRN4_9PHAE (NYN domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRN4_9PHAE)

HSP 1 Score: 524 bits (1350), Expect = 9.280e-176
Identity = 375/660 (56.82%), Postives = 416/660 (63.03%), Query Frame = 1 
Query:  178 MMAESEEGVPGAGLATERTQRVAVFVDVENVLGWLKRGGCTELLERAHELGVVSIRRAFGDFSNRTVASRQVELQRHGFDLVHTLHPAKGKSNSADISMTIDVMESCRGPDIQWVMLATGDSDFGPVFRRLRELGKGVVGVGPSSVLSSSVTLSCHDFILTDD-DSKRSGSAKKGRGKGARGERA----AAGAXXXXXGRG----KLCARVATPSQLLLTRGGFRFQRQSAANDG----VWGGGFGAAATGGAHAAEYAERGIATSPLLIGXXXXXXXXXVGAVPTTYGN---------VDWTAMSAPFTPXXXXXXXXXXXXXSRLDLSSAFARVALEDAASPSAASVEPPVLSPGQLLLPGMVTXXXXXXXXXXXXXXPRPARSEEPLLHAGRDTRRRTETMSDARDYSSL-QTAGGVFNGGRGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX---------------------------AFDGLGALSVIRPSEKVYRHLLALEAS-GAEVGGSGGGGSSLASDWGNGLSEITVAKGLVSLAEACGGQDNSEHSRAVEALGGFSTKSDGGGGEAGDGGGLGREEAFRVASLLQRCGFLSWMAKEQQWVVTVPADVEVLRRRRDEAMMEELLTRCQEAGVPFEPSLATNLLWSKAR 2004
            MMA  E+GV G   A ER QRV VFVDVENVLGWLKRGGCTELL +A ELGVV IRRAFGDFSN TVASRQ ELQRHGFDLVHT+HPAKGKSNSADISMTIDVMESCRGPDIQWV+LATGDSDFGPVFRRLRELGKGV+GVGPSSVLSSSV LSCH+FI TDD +S RSGSA KGR KG +G+R+    A        GRG    +  ARV TP QLL  RGGFRF+ Q    +G             + GG  AA Y ++G+ TSPLLI            A P +  N         +DWTA+  P TP              ++DL +AFARVA+ED     A +V  P+LSPGQLL+P MVT XXXXXXXXXXXXX    R   P    G      T T +  R+     + AGG F+G  G    XXXXXXXX                                              A  GLGALSVIRPSEK+YRHLL++E S  A    +G    SLASDWG+GLSE+TVAKGLVSLAEACGGQ                        EAG    L REEAFRVA+LLQRCGFLSW+AKEQQW+VTVPADVEVLRRRRDE MMEELLTRCQEAGVPFEP+LA NLLWSKAR
Sbjct:    1 MMAADEQGVQG-NAAGERKQRVGVFVDVENVLGWLKRGGCTELLAKAGELGVVGIRRAFGDFSNATVASRQDELQRHGFDLVHTVHPAKGKSNSADISMTIDVMESCRGPDIQWVVLATGDSDFGPVFRRLRELGKGVIGVGPSSVLSSSVALSCHEFIFTDDSNSSRSGSANKGRRKGGKGDRSTNTGATATWADMGGRGGGTYRAAARVTTPPQLLCARGGFRFKPQPVMGEGSGXXXXXXXXXXVSAGGERAASYGDQGVPTSPLLIDGPAPT------AAPASATNSFGAGKGPVIDWTAL--PSTPPPQKPSP-------QVDLPTAFARVAVEDETPAPAPAVTEPLLSPGQLLVPEMVTAXXXXXXXXXXXXXXX-XRLRGPHADVGA-----TSTGTAFRERCPPPRIAGGGFDGSGGAAGIXXXXXXXXYGGHAHSAQNAHFDSRSGSGNGGVSVHGSRAGASTPXXXXXXSLPPASGGLGALSVIRPSEKLYRHLLSVEYSPSAAADRTGDTAGSLASDWGSGLSEVTVAKGLVSLAEACGGQGGGXXXXXXXXXXXXXXXXXXXX-EAGVA--LDREEAFRVANLLQRCGFLSWVAKEQQWLVTVPADVEVLRRRRDETMMEELLTRCQEAGVPFEPTLAANLLWSKAR 635
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BLAST of mRNA_P-littoralis_Contig646.27.1 vs. uniprot
Match: D8LAX9_ECTSI (NYN domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LAX9_ECTSI)

HSP 1 Score: 275 bits (702), Expect = 8.280e-83
Identity = 239/611 (39.12%), Postives = 262/611 (42.88%), Query Frame = 1 
Query:  178 MMAESEEGVPGAGLATERTQRVAVFVDVENVLGWLKRGGCTELLERAHELGVVSIRRAFGDFSNRTVASRQVELQRHGFDLVHTLHPAKGKSNSADISMTIDVMESCRGPDIQWVMLATGDSDFGPVFRRLRELGKGVVGVGPSSVLSSSVTLSCHDFILTDDDSKRSGSAKKGRGKGARGERAAAGAXXXXXGRGKLCARVATPSQLLLTRGGFRFQRQSAANDGVWGGGFGAAATGGAHAAEYAERGIATSPLLIGXXXXXXXXXVGAVPTTYGNVDWTAMSAPFTPXXXXXXXXXXXXXSRLDLSSAFARVALEDAASPSAASVEPPVLSPGQLLLPGMVTXXXXXXXXXXXXXXPRPARSEEPLLHAGRDTRRRTETMSDARDYSSLQTAGGVFNGGRGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAFDGLGALSVIRPSEKVYRHLLALEAS-GAEVGGSGGGGSSLASDWGNGLSEITVAKGLVSLAEACGGQDNSEHSRAVEALGGFSTKSDGGGGEAGDGG-GLGREEAFRVASLLQRCGFLSWMAKEQQWVVTVPADVEVLRRRRDEAMMEELLTRCQEAGVPFEPSLATNLLWSKAR 2004
            MMA +E+GV G   A ER QRV VFVDVENVLGWLKRGGCTELL +A ELGVV IRRAFGDFSN TVASRQ ELQRHGFDLVHT+HPAKGKSNSADISMTIDVMESCR P    V  A+G +          E+G G    G ++V         H       DS                                                     R  + N GV G G+ A A+                                                  TPXXXXX                                  PP                                                                                                        AF GLGALSVIRPSEK+Y HLL++E S  A    +G    SLASDWG+GLSE+T+AKGLVSLAEACGGQ                             G  L REEAFRVA+LLQRCGFLSW+AKEQQW+VTVPADVEVLRRRRDE MMEELLTRCQEAGVPFEP+LA NLLWSKAR
Sbjct:    1 MMAANEQGVQG-NAAGERKQRVGVFVDVENVLGWLKRGGCTELLAKAGELGVVGIRRAFGDFSNATVASRQDELQRHGFDLVHTVHPAKGKSNSADISMTIDVMESCRTPG--GVFDASGGAP---------EIGGG----GAAAVYGGQA----HSAQNARFDS-----------------------------------------------------RNGSGNGGVRGHGWRAGAS--------------------------------------------------TPXXXXXSL--------------------------------PP--------------------------------------------------------------------------------------------------------AFGGLGALSVIRPSEKLYMHLLSVEYSPSAAADRTGDTAGSLASDWGSGLSEVTLAKGLVSLAEACGGQGXXXXXXXXXXXXXXXXXXXXXXXXXXXAGVALDREEAFRVANLLQRCGFLSWVAKEQQWLVTVPADVEVLRRRRDETMMEELLTRCQEAGVPFEPTLAANLLWSKAR 352
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BLAST of mRNA_P-littoralis_Contig646.27.1 vs. uniprot
Match: K9F5K4_9CYAN (HTH OST-type domain-containing protein n=1 Tax=Leptolyngbya sp. PCC 7375 TaxID=102129 RepID=K9F5K4_9CYAN)

HSP 1 Score: 174 bits (441), Expect = 1.390e-44
Identity = 89/150 (59.33%), Postives = 113/150 (75.33%), Query Frame = 1 
Query:  238 RVAVFVDVENVLGWLKRGGCTELLERAHELGVVSIRRAFGDFSNRTVASRQVELQRHGFDLVHTLHPAKGKSNSADISMTIDVMES-CRGPDIQWVMLATGDSDFGPVFRRLRELGKGVVGVGPSSVLSSSVTLSCHDFILTDDDSKRSG 684
            +VA+F+DVEN+ GWLK  G   LL+RA+ELG V +RRA+GDFS  ++++RQ+EL   GF+ VH  HP KGK NSADI + +DVME   R PD++WV+LATGDSDF P+FRRLRELGK VVGVGP S LS +V  SC+ FI  D+ S  +G
Sbjct:    4 KVAIFLDVENLSGWLKADGGESLLDRANELGRVVVRRAYGDFSIPSISARQIELNLLGFEFVHVYHPVKGK-NSADIQIVVDVMEYIARIPDLEWVILATGDSDFSPLFRRLRELGKSVVGVGPQSALSEAVKKSCNRFIYIDEKSTDNG 152
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BLAST of mRNA_P-littoralis_Contig646.27.1 vs. uniprot
Match: B4VU65_9CYAN (HTH OST-type domain-containing protein n=1 Tax=Coleofasciculus chthonoplastes PCC 7420 TaxID=118168 RepID=B4VU65_9CYAN)

HSP 1 Score: 174 bits (440), Expect = 1.790e-44
Identity = 91/151 (60.26%), Postives = 113/151 (74.83%), Query Frame = 1 
Query:  235 QRVAVFVDVENVLGWLKRGGCTELLERAHELGVVSIRRAFGDFSNRTVASRQVELQRHGFDLVHTLHPAKGKSNSADISMTIDVMES-CRGPDIQWVMLATGDSDFGPVFRRLRELGKGVVGVGPSSVLSSSVTLSCHDFILTDDDSKRSG 684
            ++VA+F+DVEN+ GWLK  G   LLERA+ELG V +RRA+GDFS  +V+ RQ EL   GF+ VH  HP KGK NSADI + +DVME   R PD++WV+LATGDSDF P+FRRLRELGK VVGVGP S LS +V  SC+ FI  D++S  +G
Sbjct:    3 EKVAIFLDVENLSGWLKVDGGEALLERANELGRVVVRRAYGDFSIASVSVRQPELNLLGFEFVHVYHPVKGK-NSADIQIVVDVMEYLARIPDLEWVVLATGDSDFSPLFRRLRELGKSVVGVGPRSALSEAVKKSCNRFIYIDEESTTNG 152
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BLAST of mRNA_P-littoralis_Contig646.27.1 vs. uniprot
Match: A0A1C0V8K5_9CYAN (HTH OST-type domain-containing protein n=3 Tax=unclassified Limnothrix TaxID=2632864 RepID=A0A1C0V8K5_9CYAN)

HSP 1 Score: 174 bits (440), Expect = 2.050e-44
Identity = 90/146 (61.64%), Postives = 111/146 (76.03%), Query Frame = 1 
Query:  238 RVAVFVDVENVLGWLKRGGCTELLERAHELGVVSIRRAFGDFSNRTVASRQVELQRHGFDLVHTLHPAKGKSNSADISMTIDVMES-CRGPDIQWVMLATGDSDFGPVFRRLRELGKGVVGVGPSSVLSSSVTLSCHDFILTDDDS 672
            +VA+F+DVEN+ GWLK  G   LLERA+ELG V +RRA+GDFS ++V+ RQ EL   GF+ VH  HP KGK NSADI + +DVME   R PD++WV+LATGDSDF P+FRRLRELGK VVGVGP S LS +V  SC+ FI  D++S
Sbjct:    4 KVAIFLDVENLSGWLKADGGETLLERANELGRVVVRRAYGDFSIQSVSVRQPELNLLGFEFVHVYHPVKGK-NSADIQIVVDVMEYLARVPDLEWVVLATGDSDFSPLFRRLRELGKSVVGVGPRSALSEAVKKSCNRFIYIDEES 148
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BLAST of mRNA_P-littoralis_Contig646.27.1 vs. uniprot
Match: A0A2W7ACP4_9CYAN (HTH OST-type domain-containing protein n=1 Tax=Leptolyngbya sp. TaxID=47254 RepID=A0A2W7ACP4_9CYAN)

HSP 1 Score: 173 bits (438), Expect = 4.760e-44
Identity = 89/146 (60.96%), Postives = 110/146 (75.34%), Query Frame = 1 
Query:  232 TQRVAVFVDVENVLGWLKRGGCTELLERAHELGVVSIRRAFGDFSNRTVASRQVELQRHGFDLVHTLHPAKGKSNSADISMTIDVMES-CRGPDIQWVMLATGDSDFGPVFRRLRELGKGVVGVGPSSVLSSSVTLSCHDFILTDD 666
            T +VA+F+DVEN+ GWLK  G   LLERA+ELG V +RRA+GDFS   V +RQ EL   GF+ VH  HPAKGK NSADI + +DVME   R PD++W++LATGDSDF P+FRRLRE+GK VVGVGP SVLS +V  SC+ FI  ++
Sbjct:    2 TDKVAIFLDVENLSGWLKSDGGEALLERANELGRVVVRRAYGDFSIPAVIARQTELNLLGFEFVHVYHPAKGK-NSADIQIVVDVMEYLARIPDLEWIVLATGDSDFSPLFRRLREMGKSVVGVGPRSVLSEAVKKSCNRFIYINE 146
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BLAST of mRNA_P-littoralis_Contig646.27.1 vs. uniprot
Match: A0A6H9GN88_MICAE (HTH OST-type domain-containing protein n=5 Tax=Microcystis aeruginosa TaxID=1126 RepID=A0A6H9GN88_MICAE)

HSP 1 Score: 172 bits (436), Expect = 6.910e-44
Identity = 89/146 (60.96%), Postives = 110/146 (75.34%), Query Frame = 1 
Query:  235 QRVAVFVDVENVLGWLKRGGCTELLERAHELGVVSIRRAFGDFSNRTVASRQVELQRHGFDLVHTLHPAKGKSNSADISMTIDVMES-CRGPDIQWVMLATGDSDFGPVFRRLRELGKGVVGVGPSSVLSSSVTLSCHDFILTDDD 669
            ++VA+F+DVEN+ GWLK  G   LLERA+ELG V +RRA+GDFS  +V+ RQ EL   GF+ VH  HP KGK NSADI + +DVME   R PD++WV+LATGDSDF P+FRRLRELGK VVGVGP S LS +V  SC+ FI  D++
Sbjct:    3 EKVAIFLDVENLSGWLKADGGEALLERANELGRVVVRRAYGDFSIASVSVRQPELNLLGFEFVHVYHPVKGK-NSADIQIVVDVMEYLARIPDLEWVVLATGDSDFSPLFRRLRELGKSVVGVGPRSALSEAVKKSCNRFIYIDEE 147
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BLAST of mRNA_P-littoralis_Contig646.27.1 vs. uniprot
Match: UPI00168003E0 (NYN domain-containing protein n=1 Tax=Leptolyngbya sp. FACHB-36 TaxID=2692808 RepID=UPI00168003E0)

HSP 1 Score: 170 bits (430), Expect = 4.700e-43
Identity = 87/147 (59.18%), Postives = 111/147 (75.51%), Query Frame = 1 
Query:  232 TQRVAVFVDVENVLGWLKRGGCTELLERAHELGVVSIRRAFGDFSNRTVASRQVELQRHGFDLVHTLHPAKGKSNSADISMTIDVMES-CRGPDIQWVMLATGDSDFGPVFRRLRELGKGVVGVGPSSVLSSSVTLSCHDFILTDDD 669
            +++VA+F+DVEN+ GWLK  G   LLERA+ELG V +RRA+GDFS  +V+ RQ EL   GF+ VH  HP KGK NSADI + +DVME   R PD++WV+LATGDSDF P+FRRLRELGK V+GVGP S LS +V  +C+ FI  D++
Sbjct:    2 SEKVAIFLDVENLSGWLKADGGETLLERANELGRVVVRRAYGDFSILSVSVRQPELNLLGFEFVHVYHPVKGK-NSADIQIVVDVMEYLARIPDLEWVVLATGDSDFSPLFRRLRELGKSVMGVGPRSALSEAVKRTCNRFIYIDEE 147
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BLAST of mRNA_P-littoralis_Contig646.27.1 vs. uniprot
Match: UPI0017466E78 (NYN domain-containing protein n=1 Tax=Phormidium tenue TaxID=126344 RepID=UPI0017466E78)

HSP 1 Score: 167 bits (422), Expect = 5.650e-42
Identity = 87/145 (60.00%), Postives = 105/145 (72.41%), Query Frame = 1 
Query:  235 QRVAVFVDVENVLGWLKRGGCTELLERAHELGVVSIRRAFGDFSNRTVASRQVELQRHGFDLVHTLHPAKGKSNSADISMTIDVMESC-RGPDIQWVMLATGDSDFGPVFRRLRELGKGVVGVGPSSVLSSSVTLSCHDFILTDD 666
            ++VA+F+DVEN+ GWLK  G   LLE A ELG V +RRA+GDFSN  V+ RQ EL   GF+ V   HP KGK NSADI + +DVME   R PD++W++LATGDSDF P+FRRLREL K VVGVGP SVLS +V  SC  FI  D+
Sbjct:    3 EKVAIFLDVENLSGWLKADGGATLLEHASELGRVVVRRAYGDFSNPAVSVRQPELNLLGFEFVQVYHPVKGK-NSADIQIVVDVMEYLTRIPDLEWIVLATGDSDFSPLFRRLRELDKSVVGVGPRSVLSEAVKKSCSQFIYIDE 146
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BLAST of mRNA_P-littoralis_Contig646.27.1 vs. uniprot
Match: K9ZNR7_ANACC (Uncharacterized protein n=2 Tax=Anabaena TaxID=1163 RepID=K9ZNR7_ANACC)

HSP 1 Score: 164 bits (415), Expect = 7.210e-41
Identity = 84/143 (58.74%), Postives = 104/143 (72.73%), Query Frame = 1 
Query:  238 RVAVFVDVENVLGWLKRGGCTELLERAHELGVVSIRRAFGDFSNRTVASRQVELQRHGFDLVHTLHPAKGKSNSADISMTIDVMESC-RGPDIQWVMLATGDSDFGPVFRRLRELGKGVVGVGPSSVLSSSVTLSCHDFILTD 663
            +V +F+D+EN+ GWLK  G   LL+RA ELG V +RRA+GDFS  +V+ RQ EL   GF+ VH  HP KGK NSADI + +DVME   R PD+QW +LATGD+DF P+FRRL+ELGK VVG+GP S LS  V  SC+ FI TD
Sbjct:    4 KVGIFLDIENLAGWLKLDGGETLLDRASELGSVVVRRAYGDFSLPSVSKRQSELNLLGFEFVHVYHPVKGK-NSADIQIVVDVMEYLTRVPDLQWFVLATGDADFSPLFRRLKELGKSVVGIGPKSKLSEVVKKSCNRFIYTD 145
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig646.27.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JRN4_9PHAE9.280e-17656.82NYN domain-containing protein n=1 Tax=Ectocarpus s... [more]
D8LAX9_ECTSI8.280e-8339.12NYN domain-containing protein n=1 Tax=Ectocarpus s... [more]
K9F5K4_9CYAN1.390e-4459.33HTH OST-type domain-containing protein n=1 Tax=Lep... [more]
B4VU65_9CYAN1.790e-4460.26HTH OST-type domain-containing protein n=1 Tax=Col... [more]
A0A1C0V8K5_9CYAN2.050e-4461.64HTH OST-type domain-containing protein n=3 Tax=unc... [more]
A0A2W7ACP4_9CYAN4.760e-4460.96HTH OST-type domain-containing protein n=1 Tax=Lep... [more]
A0A6H9GN88_MICAE6.910e-4460.96HTH OST-type domain-containing protein n=5 Tax=Mic... [more]
UPI00168003E04.700e-4359.18NYN domain-containing protein n=1 Tax=Leptolyngbya... [more]
UPI0017466E785.650e-4260.00NYN domain-containing protein n=1 Tax=Phormidium t... [more]
K9ZNR7_ANACC7.210e-4158.74Uncharacterized protein n=2 Tax=Anabaena TaxID=116... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig646contigP-littoralis_Contig646:86499..94874 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog102129.Lepto7375DRAFT_7764
PFAMsNYN,OST-HTH
Model size2033
Max annot lvl1117|Cyanobacteria
Hectar predicted targeting categoryother localisation
Exons3
Evalue9.94e-46
EggNOG OGsCOG1432@1|root,COG1432@2|Bacteria,1G3NN@1117|Cyanobacteria,1HHNU@1150|Oscillatoriales
Ec32 ortholog descriptionNYN domain, limkain-b1-type
Ec32 orthologEc-27_006040.1
DescriptionNYN domain
Cds size1842
COG categoryS
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791346.9506505-UTR-P-littoralis_Contig646:86498..865241680791346.9506505-UTR-P-littoralis_Contig646:86498..86524Pylaiella littoralis U1_48UTRP-littoralis_Contig646 86499..86524 -
1680791347.0091162-UTR-P-littoralis_Contig646:94709..948741680791347.0091162-UTR-P-littoralis_Contig646:94709..94874Pylaiella littoralis U1_48UTRP-littoralis_Contig646 94710..94874 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791346.9652126-CDS-P-littoralis_Contig646:86524..880311680791346.9652126-CDS-P-littoralis_Contig646:86524..88031Pylaiella littoralis U1_48CDSP-littoralis_Contig646 86525..88031 -
1680791346.9768507-CDS-P-littoralis_Contig646:88444..886801680791346.9768507-CDS-P-littoralis_Contig646:88444..88680Pylaiella littoralis U1_48CDSP-littoralis_Contig646 88445..88680 -
1680791346.9901526-CDS-P-littoralis_Contig646:94610..947091680791346.9901526-CDS-P-littoralis_Contig646:94610..94709Pylaiella littoralis U1_48CDSP-littoralis_Contig646 94611..94709 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig646.27.1prot_P-littoralis_Contig646.27.1Pylaiella littoralis U1_48polypeptideP-littoralis_Contig646 86525..94709 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig646.27.1

>prot_P-littoralis_Contig646.27.1 ID=prot_P-littoralis_Contig646.27.1|Name=mRNA_P-littoralis_Contig646.27.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=614bp
MPKEMMAESEEGVPGAGLATERTQRVAVFVDVENVLGWLKRGGCTELLER
AHELGVVSIRRAFGDFSNRTVASRQVELQRHGFDLVHTLHPAKGKSNSAD
ISMTIDVMESCRGPDIQWVMLATGDSDFGPVFRRLRELGKGVVGVGPSSV
LSSSVTLSCHDFILTDDDSKRSGSAKKGRGKGARGERAAAGAGPGTGGRG
KLCARVATPSQLLLTRGGFRFQRQSAANDGVWGGGFGAAATGGAHAAEYA
ERGIATSPLLIGGPPPPPAAAVGAVPTTYGNVDWTAMSAPFTPPPPLSPP
PPPPSSSRLDLSSAFARVALEDAASPSAASVEPPVLSPGQLLLPGMVTAA
AATAAASSPAVSPRPARSEEPLLHAGRDTRRRTETMSDARDYSSLQTAGG
VFNGGRGGGSGGDHGGSSKGRGAWTGPPTSPLPPPLPPAFDGLGALSVIR
PSEKVYRHLLALEASGAEVGGSGGGGSSLASDWGNGLSEITVAKGLVSLA
EACGGQDNSEHSRAVEALGGFSTKSDGGGGEAGDGGGLGREEAFRVASLL
QRCGFLSWMAKEQQWVVTVPADVEVLRRRRDEAMMEELLTRCQEAGVPFE
PSLATNLLWSKAR*
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mRNA from alignment at P-littoralis_Contig646:86499..94874-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig646.27.1 ID=mRNA_P-littoralis_Contig646.27.1|Name=mRNA_P-littoralis_Contig646.27.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=8376bp|location=Sequence derived from alignment at P-littoralis_Contig646:86499..94874- (Pylaiella littoralis U1_48)
CCCATCGGTCTGTTGTCCGACTCCATTTTTATTCATTTATTTTTGTCGTC
TTTTTTTTTCTGGGCTGTCTCTCGATATTAAAGGCCTTATAATTGTTGTC
AGGCATTCGGTTAGCCCTCCAGCTAACACACAAACAGAAGAGACAAGCAT
CAGAGGAGGAGGTTTATGCCCAAAGAAATGATGGCGGAGAGCGAGGAGGG
CGTACCAGGAGCAGGGTTGGCCACGGAGAGAACACAGAGAGTTGCTGTTT
TCGTTGATGTGGAGGTAAGAGAGGCATTTGAGACGGAGACAACGGTGCTC
GCCAAACATATACACTTACTTGCCTGTGAGAATGCCGCCGTTTAGGTAAA
CACACCGCAAACACACGGCGTGAAGACACGTACAGTACAACACGGCCGTG
GTATGACAGCAGCACACAGAGAGTGTGCTGGTGTGCAACACTGAACATGG
GCCACTACCATTTTTCCTCCACAGGTGGTGTGATGCTATGTTTGTACCGG
CGTTGCCGGTGTGGTCTCAAAGACTACACAAACAGGAGGAGCGGCGTGCT
TGTCTCGGCAAATTGCCCACTCTCCACTTTGCATGTGTGATGCCAGCACT
GTCAGCGACCCGTGGTTGCCAGTAACAGTACAGATCAGTCAGCGGCCCTG
TATACGGCACCATGAGAGGAATACTGCAGCGGATTGCCCCAAATAGTGGT
GTACTACTGTGCAAAAATCGTCTCGGCGCCAATCCGTCACGATGATATTA
AATATCGGACTTCACAGCAGTGACTTACAGCAGCCAAGTCAAGTGCGGAG
CTACGTGCGGAGCCTCCAACACCGTCACATATCACATTTCACACATATGT
ACTTCGTATCACATCAAACGATACAGCAGTAACTCCCCGTGCTCACACAT
TTGATTATCCTTCTCTGTGTGTGTTAGTGCACGCCATCCCAACCATTCTG
GATGCTAGTCTACGGTACACCACACATTAATTGAGCGCTCCAGCCGGGGT
CACGCATCAGGAGGAAGCAATTGGGAGGAAGGTCACAGGATTTTTTTTTT
TCCTTGTTCTCCGCGGTCGGCGGTGCTTGCCTGTTTCCTGTCTCCTGTCC
TGTACAGCAGTATATATAGTCTATACTTCGTATTTTTTGAACTGATGTGT
TTGTAAGAAGAAAAAAAACATCAATGTGTTCGCCTCTCTCCAGACGAGGG
TCTGGATTAGATATTGCAACGAATCATACAAAGAATGAGGTACATCTACT
ACTACTCGATACAAGTAACTCATGAGACAAATGATTATTTTGGGAAAAAT
AAAAAACATTATTTTTTTTATTTTTTTCTCTCCGAGTGTTGTTCGTTATA
TAACACCCACCGCGATGCGAGTGCTCGTTTGTTCGCATCATGGTGTTATA
TCATCAACACTTACGACCTATATAGATGTGATGTATATATCATCTATGGT
GTCATATGTTGTACAGAGTAAGGGTCCCGATAGTAGCGGCACCCAGTGTT
ATGGTGCCAATGGATTTTCTTGACGCTTCAGGGTAGGCCATTATTCGTCA
GCGGCAGTACGCCGCTAAACCGGGTAGAAGTGCCACACACACGTAAAATT
CCCTCTTCCAACCGACGCACTGGCATTGCGACGTGGGCTGCGAAGAACTA
CATCTTTGCCACGTGTTCCCCCTTGGGCAAGGAAGTGCCCTCCCTCGGTA
TTGCCACACACCAGTGTGCGAGAACGATAGTCAGAGGTGCGTTGTATAAT
TGAGGACCAACAAATAACACATGAAGGATTGCTGAATCGCAGTTGTTGGT
TGGAGTTGTGTCACAGTGGTGGATGTCCCGAAAGGTAGTTAACGGGGTTT
CGACCGAAGAGTTTTGCTGTGTCACAGTGTGTGTCCCGAAAGGTACTTTA
TGGGAATTCGACCGAGGGGGATTGCACCGACAGCAGGAAAAGCATCTCAG
GAAGCAAGAGCAGGACGAAGGGCTGTGCGTGCACTGCCTCAGGAGTTCCT
GTGTGTGTGTGCTGGTGCTGCTTCGCAGTTGACACTAAGCACGATTTTGA
GACTGCTGTACGCTGCTGCTGCTGCTGCTGTAAGTAGCACGAGCACCCAG
CACACCATTTCGGAGCAGGCCCGAGACGCATCCGAAGATTAGAGGGGTTT
CCACACGGGCGCCTTCATTAAACCGGTATTCTCGGTATTCTGCTGTTCGT
ATCCCCGGCGACATTTTTGCATTTTTGTGAAGATGTATGTCCCTGACTGG
GCGAGACCCTCCCCCTACCCGCTAAAATTGATATCTGGGAATCTAGGATG
ACCAGCATTCACTGAACCCCTCTTTTTTTCGGGAAAAACAGAGAGAGGGG
GTTGCTTGCTGCAGAAAGAGCTCGTCCAAGAGCACGCACCGACCCATCCT
CGTACTACCCCTAGAACCCAACCCAACCCAATCCATTCTGTCACTCCCAC
CCAGCGAACGCTCACAACCCAGCTGTGTGCTTTAGTCTAATGTCAGAGCA
GCAGTAAGCGCCAGTATTAGTTCCATGGAAGAGGACGGGAGAGGGCTGTG
GGTGCTCTGCATATCGTTAGGGGCTCAATGCTGTCTGTTGTTACTGCATA
CAGCAGTAGTACACAGCAGTGTAGTATGAAGTACGTTTAGTACTGCTGAC
TCCACGAGTAGGTGACCACACACAGCAGTACCAGGACGAGAAGGCCACAC
CACACAGCAAATTGACCCTTGAGCCTACAGAGCAAGAGAGATACACAGGT
TTTCGAACGATACCCCGACGTAACCCAAACGCCAACCCAACGAAACTACC
CCAACCCAAGCCACCCTTACAATATCTCCCTAACCCAACTCAACCCAACC
GACCCAATTCAACCGAACTCAACCCTATCCAACACAACCCAACACAACCA
TACGGTACCCCCCCCAACCCCCCCCAGAGGAGGGGGCGCAACCCTAGACA
ACCAAACCCAACCCAACCCAACCATCCCTACCCAACCCAACACGACCTAA
CCCAACCTGCCAAACCCAACACAACACAACCATATGGTACCCCCCCTACC
CAACCCAACCCAACCTTACGGTACCCCCCCCCCAACCCCCCCCAGAGGGG
GGGGCGCAACCCTGCCCAACCCAACCCAACTCAACCCAACTCAACCATCC
CCACCCAACCCAACACGACCCAACCCAACATGCCCAAACCAACCCAACAC
AACCATACGGTACCCCCCCCTACCCAACCCAACGACCCAACCCAACCCAA
CCCAACCATACGGTACACCCCCCCCAACCGCCCCCGCCAGAGGGGGGGGC
GCAACCCTGCCCAACCCAACCCAACTCAACCCAACACAACCCGACCCCCC
CCAGAGGCCCCGTGGTGGAATGTTTTATCACAATAGATTTATACTCCGGA
GTAGTATTTTTAACAACATTTCCGAGTATACGGCGGCAGCGCCATGACGC
CCCCATCTCTCGCCATCTCAATGTATTTTTTGGTCCTCTATCGTAACTCC
GCCTCGTCGTTGGGAGGGTCGGCCTCCTCCGGGTGCTTGTAATTTTTGGT
GTTTGCCGTGACCATCAACACACCCTTTGAGTCCGCGGGTAGAGCGCCGG
CGGCCTCTTCTTCGTGCCAAACCTTTTTCTTGCCTAAGCAAGAAGGGTCC
GCGGCTAGAGCGCCTGCGACCTCCTTTTCTTGCCTAAGCCTTCTTCTTGC
CTAAGCAAGAAGACTACGAGTAGATAGGTGCGAGTGACTCTCTGTGTCAT
CAACAGTGCCTACCTCACGACATGTTCCATCGCCCACAACACACACCCAG
CTTGACGCTTATGTTCAATCCACACTCACAACCATTTGGGGCTACAAGTA
CGAGTTTCAGTTCAACGTTTGGGAGTAGGCGTATGGCATCATGGGTGAGC
AGTGGTGGCGGCAACTCGTATGTGTTTGTGGGATGTTTGTATGCGTACAC
AGCAGGCCGGGCGCTCCACAAGTTCGTAGCGTCCGATATAGCGGCGAGGT
GTGCCGTTATATCGGGGTGCAGTCGTGCCACGAAATTTCTGTACCGCTAT
TCGGGGGTTTCCGCTATTCAAGGCGCCGCAATGTTGGGACCCCTACCATA
CTGCTGTATCTCTGTCAGAGGGTTTCGAGGTCACCCGCTGAGCCCCGTCA
GTGTTCGATTTCATCTTATTTGGTCTGCCTCTCTCTTTGTTCTTGCATCA
TATGCCTGTGGCACAGGTATGTAAATATACCGTCCTTATAGTATTAGAGT
CACAGAGCCCCCCCCCCACCAATTTTGCACTACACACACACCTACCGCTG
TATCGGGCCACTGGATGCACTTTCTTCCCGCGCAAGCTTACGCAGCAGCA
GCAGCAGCAACCGATGGGAGTGCGTTCTGCTATATGTATATACAAGTATG
CGGCCCACAGAGAGCGCAACACACAAAAAAGAGCATAACTTCTGTACTTC
GTATCATATGATGGCATGACGAGTCGCTCTAAAGTGTGCCATAATTCTTG
CCGAAGATCAATCATCGTCTCTTATCTCCCACTACAAAAGGCATCCACGT
CCCTCATGTGAACGCAGCCAACGGAGGCCGAGTACGCTCTTCTTCCTGTT
TCGCTGGAGATGATGTTTTCATGTCAGACACCCAGCCTTAGTGTCATGCC
TGGTCTGATAAAGTACGTCTTTCGTTGTTCGTTTTACCCTAACATCCGCA
GGTAGATCTCTACGATAGGGTTGTGCATTGGGGCCGATGTAATGATGTAT
CGCACGATGCAAAATTACATTTCTATCGTCTGAGGGGCTTTGCCTATGTA
CTTTTGTATCGAAATCGGTACGTATCTTTTTCTCGAATTCAATAGATGCC
CATATATTGGTGTGTTTGCCCACTGCTAGCGGCGTCGTTTCCACATGTAG
CAGGAGGCGGAGCAGGGTCTTACCGCTGTATGTCCTGTGGTACTGCTGTT
GTCTCCTGGTGCTATTTGCTATTTGGCAATGCGAATCACTGGATTGGTGT
CGGATAAACGCCGTCAAGTTCCCACCACTGCTAGAGGCGCTTGTCCGGCA
CCTTTTGGTCATACCGGCATCGCAGGCGTAGTCCAGAGCGCGTGTTCTCG
AGCGCTGGGCAGATTGTCACCCAAACGCGCAACCGATCGGAAGACGTCGA
GCCTCTGGTTGCGTTGAAGAACATTAGGGGTGTGGTTGAAGAATGGCATC
GGCCGAAGGCGACCCTGTGTGATGCGTGGTTGATTGCTGCAAACCAGGGG
AACAGCAGTTTGGTTGTTGCGTTGGAATTCAACATGAAATATAATTGCTC
GATTTTGAAGAGAAAATGAAGCCAAATGGCGTACGAGAGCTTCGCCGACA
TATCGGGAGAGCTACCGCACATCGGCTGCGCTGATTTGCCTACATGCAAA
GTACCTGGTATCAATTATCGGTGCCGATATGTAACCCTGTATGATGGATC
TCGCACACAACAGACCGTATCATACACTCTTTGAAAAAAAACAGAAAACA
TTTCAAAGAAAGAAAAGGCACCCGCGTGAGACGCAACTCCGTGGAACGGG
CTGGCTTGTTCACAGAGACAGCAGTATTGAAGTTTTCCATTTTTCGTTCC
GTTTACTTTTCGACAAAGACTCTCTGCCTTCAGGCGCGCAACAACCATGT
ACGTGGAGGCTTTCTTTTGTTTCATTTGCGAGGGGCATCAGTATGGTTGA
CTCTGTCTAGACCACAAGACTCCAGAACGGATTACAGCAGAATCAGCGAT
CACAAAGTCCAATGCTGCTGTTGCACGATATCATATCTCACGTATCCGCC
GCTAGTGGTGATCTACGGTGCCTCGACGTCTCCAAAAGTCTGAAAATACT
TTTCACAGTCCAATACCGTAAGATGGTGCGGAAACAATTCCTTCATGCTT
CGAAAAGATCCAACAATTTGGAGTTCTGTCTCGGATCGAAGCGGTTACAA
TCGGTTTTTGGAACCGCTTCCTGTGCTGCTTTGTGCTCTTGCACCCCAAC
TGCTGTACTCAAAAACAGCACGTGGTGGTACTGTGAGTGCGGTGCAGGAG
GACACTCGGTCGGGGGGTTCGCGACAAGCTTTTAACTCCCCCCACACGCG
GCTGCACACGTCTGATCCCCCTCCTAAACTCATGTTTTGTGTGCGTGCGT
GTGTGTGTGGGTGGTGTCATGACACGTATGATATGTCCCTCCAGAACGTC
CTGGGCTGGCTTAAGCGCGGCGGCTGCACGGAGCTGCTCGAGCGGGCCCA
CGAGCTGGGGGTGGTGAGCATCCGGCGGGCGTTCGGCGACTTCTCCAACC
GGACGGTGGCTTCCAGACAGGTGGAGCTGCAGCGACACGGGTTCGATCTG
GTTCACACGTTGCACCCGGCGAAGGGGAAGAGCAACTCGGCGGACATAAG
CATGACGATAGACGTGATGGAGAGTTGCAGGTGAGCAGAAGAGACACGAC
CACGAGAGGTGGAGGTGGAGGTGAACTTATGCATGCACCCCTTTCTGCTT
CGAGGCTCGCTCAATTTTTTTTCATGATCACCGCAACCCCGCCAGGGAAG
CATGCACACCCGGCGCTCACTTGCGGTTTTGTACGACTTGGCTCTCTCAG
ACCCATGAAGGCGGGCTCACGGTTCCCTAATGGCACGGAACCTCCCCCCC
CCCCCCCACTCTCTCTGTCTCTCTCTAGACACACACAGCAGTTAAGGCTT
CTTGCTCTTCGTTCCTCCTCCCCTCTCTTTACCTCTTCTTTTTGTGCATT
CCTCCCTGCAACCGACCACCACGCGCTTGCCCTGCCGCCGCCGCCGCCGC
CTCGCGGCCAAAAAACAATTTTTGGCATGTTCAAAATTCATAGGGGACCT
GATATTCAGTGGGTGATGCTTGCGACGGGAGACTCGGACTTCGGCCCGGT
CTTCCGCCGCCTCCGAGAGCTGGGCAAGGGGGTCGTGGGCGTAGGCCCCT
CCTCCGTCCTGAGCTCCTCGGTGACGCTCTCTTGCCACGACTTTATCCTC
ACAGACGACGACAGCAAGAGGAGCGGTAGCGCCAAGAAGGGGAGAGGGAA
GGGCGCGAGGGGGGAGCGAGCGGCCGCCGGGGCGGGGCCGGGGACCGGCG
GGAGGGGGAAGCTTTGCGCGCGCGTGGCGACCCCGTCGCAGCTGCTGTTG
ACCCGAGGCGGTTTCAGGTTTCAGCGGCAGTCCGCGGCGAACGATGGCGT
CTGGGGGGGGGGGTTCGGGGCGGCAGCCACGGGCGGTGCCCACGCAGCGG
AGTATGCGGAGCGCGGCATCGCGACGTCGCCGTTGCTGATCGGCGGCCCT
CCCCCTCCTCCGGCGGCGGCGGTAGGAGCTGTGCCGACGACATATGGAAA
CGTCGATTGGACGGCCATGTCCGCCCCTTTTACGCCCCCGCCGCCACTAT
CACCGCCGCCGCCACCGCCCTCGTCATCGCGGTTAGATTTATCGTCTGCA
TTTGCTAGGGTGGCCCTGGAAGACGCGGCATCCCCTTCCGCCGCATCCGT
AGAGCCGCCGGTCCTGTCCCCAGGTCAGCTGCTTCTTCCGGGGATGGTGA
CGGCGGCGGCAGCAACGGCGGCCGCTTCCTCTCCGGCCGTTTCTCCCCGC
CCCGCCCGGTCGGAGGAACCGCTCCTACACGCTGGTCGTGACACCAGGAG
GAGGACAGAAACAATGTCGGATGCGCGTGATTATTCTTCGCTGCAGACGG
CCGGGGGAGTGTTCAACGGTGGCCGTGGCGGCGGCAGCGGTGGTGATCAT
GGGGGTAGTAGTAAGGGGCGCGGGGCGTGGACCGGGCCACCGACATCGCC
TCTCCCGCCGCCGCTGCCGCCAGCGTTCGACGGGCTGGGAGCGCTCTCGG
TGATCCGGCCTTCGGAAAAGGTTTACCGACACTTGCTCGCCCTGGAAGCC
TCTGGCGCAGAAGTGGGGGGTAGCGGCGGCGGCGGCAGCAGCCTCGCCAG
CGACTGGGGCAACGGCTTGTCGGAAATTACAGTGGCGAAAGGTCTGGTGT
CTCTCGCAGAGGCTTGCGGGGGCCAGGACAACAGCGAGCACTCCCGGGCT
GTTGAGGCCCTCGGCGGGTTTTCCACGAAAAGCGATGGCGGGGGCGGCGA
GGCTGGTGATGGTGGTGGCCTCGGGCGCGAAGAAGCGTTCCGGGTCGCCA
GCCTGCTGCAGCGATGCGGGTTCTTGTCCTGGATGGCGAAGGAGCAGCAG
TGGGTCGTGACGGTGCCCGCGGACGTGGAGGTCTTGAGGAGGAGGCGGGA
CGAGGCTATGATGGAGGAGCTGCTCACCAGGTGCCAGGAGGCCGGTGTTC
CTTTTGAGCCGTCCCTCGCGACCAACTTGCTGTGGTCCAAAGCCCGGTGA
AGGATAGCTAATCGAGAGTAGGGGAG
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Coding sequence (CDS) from alignment at P-littoralis_Contig646:86499..94874-

>mRNA_P-littoralis_Contig646.27.1 ID=mRNA_P-littoralis_Contig646.27.1|Name=mRNA_P-littoralis_Contig646.27.1|organism=Pylaiella littoralis U1_48|type=CDS|length=1842bp|location=Sequence derived from alignment at P-littoralis_Contig646:86499..94874- (Pylaiella littoralis U1_48)
ATGCCCAAAGAAATGATGGCGGAGAGCGAGGAGGGCGTACCAGGAGCAGG
GTTGGCCACGGAGAGAACACAGAGAGTTGCTGTTTTCGTTGATGTGGAGA
ACGTCCTGGGCTGGCTTAAGCGCGGCGGCTGCACGGAGCTGCTCGAGCGG
GCCCACGAGCTGGGGGTGGTGAGCATCCGGCGGGCGTTCGGCGACTTCTC
CAACCGGACGGTGGCTTCCAGACAGGTGGAGCTGCAGCGACACGGGTTCG
ATCTGGTTCACACGTTGCACCCGGCGAAGGGGAAGAGCAACTCGGCGGAC
ATAAGCATGACGATAGACGTGATGGAGAGTTGCAGGGGACCTGATATTCA
GTGGGTGATGCTTGCGACGGGAGACTCGGACTTCGGCCCGGTCTTCCGCC
GCCTCCGAGAGCTGGGCAAGGGGGTCGTGGGCGTAGGCCCCTCCTCCGTC
CTGAGCTCCTCGGTGACGCTCTCTTGCCACGACTTTATCCTCACAGACGA
CGACAGCAAGAGGAGCGGTAGCGCCAAGAAGGGGAGAGGGAAGGGCGCGA
GGGGGGAGCGAGCGGCCGCCGGGGCGGGGCCGGGGACCGGCGGGAGGGGG
AAGCTTTGCGCGCGCGTGGCGACCCCGTCGCAGCTGCTGTTGACCCGAGG
CGGTTTCAGGTTTCAGCGGCAGTCCGCGGCGAACGATGGCGTCTGGGGGG
GGGGGTTCGGGGCGGCAGCCACGGGCGGTGCCCACGCAGCGGAGTATGCG
GAGCGCGGCATCGCGACGTCGCCGTTGCTGATCGGCGGCCCTCCCCCTCC
TCCGGCGGCGGCGGTAGGAGCTGTGCCGACGACATATGGAAACGTCGATT
GGACGGCCATGTCCGCCCCTTTTACGCCCCCGCCGCCACTATCACCGCCG
CCGCCACCGCCCTCGTCATCGCGGTTAGATTTATCGTCTGCATTTGCTAG
GGTGGCCCTGGAAGACGCGGCATCCCCTTCCGCCGCATCCGTAGAGCCGC
CGGTCCTGTCCCCAGGTCAGCTGCTTCTTCCGGGGATGGTGACGGCGGCG
GCAGCAACGGCGGCCGCTTCCTCTCCGGCCGTTTCTCCCCGCCCCGCCCG
GTCGGAGGAACCGCTCCTACACGCTGGTCGTGACACCAGGAGGAGGACAG
AAACAATGTCGGATGCGCGTGATTATTCTTCGCTGCAGACGGCCGGGGGA
GTGTTCAACGGTGGCCGTGGCGGCGGCAGCGGTGGTGATCATGGGGGTAG
TAGTAAGGGGCGCGGGGCGTGGACCGGGCCACCGACATCGCCTCTCCCGC
CGCCGCTGCCGCCAGCGTTCGACGGGCTGGGAGCGCTCTCGGTGATCCGG
CCTTCGGAAAAGGTTTACCGACACTTGCTCGCCCTGGAAGCCTCTGGCGC
AGAAGTGGGGGGTAGCGGCGGCGGCGGCAGCAGCCTCGCCAGCGACTGGG
GCAACGGCTTGTCGGAAATTACAGTGGCGAAAGGTCTGGTGTCTCTCGCA
GAGGCTTGCGGGGGCCAGGACAACAGCGAGCACTCCCGGGCTGTTGAGGC
CCTCGGCGGGTTTTCCACGAAAAGCGATGGCGGGGGCGGCGAGGCTGGTG
ATGGTGGTGGCCTCGGGCGCGAAGAAGCGTTCCGGGTCGCCAGCCTGCTG
CAGCGATGCGGGTTCTTGTCCTGGATGGCGAAGGAGCAGCAGTGGGTCGT
GACGGTGCCCGCGGACGTGGAGGTCTTGAGGAGGAGGCGGGACGAGGCTA
TGATGGAGGAGCTGCTCACCAGGTGCCAGGAGGCCGGTGTTCCTTTTGAG
CCGTCCCTCGCGACCAACTTGCTGTGGTCCAAAGCCCGGTGA
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