mRNA_P-littoralis_Contig64.77.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig64.77.1 vs. uniprot
Match: D8LQ55_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LQ55_ECTSI) HSP 1 Score: 460 bits (1184), Expect = 1.570e-158 Identity = 245/274 (89.42%), Postives = 251/274 (91.61%), Query Frame = 3
Query: 222 MARNEEKAQMMMNKWTTMKEQMAKPERGRRPFLSSECDNLQDAELWRRDIIRETTKSVHLIQNAGAGEHKIRDLNDQINKLLRERTHWDKRIVELGGPDYAANAPKSYDADGRELPGGGGYMYFGAAKDLPGVRELFHKSDVENPRRTRKDMYQFITPDYYGYRDEEDGVLVAKEAVTEKRKVQEAVLEWQAEKRRRVEDGEEEEGG-ADDEDVQDVQGQAAXXXXXXTSAQVRAHVPVPSQDAIKEAILKRKKLALLKRLDGGEATPEDDIED 1040
MARNEEKAQMMMNKWTTMKEQMAKPERGRRPFLSSECDNLQDAELWRRDIIRET+KSVHLIQNAGAGEHKIRDLNDQINKLLRERTHWDKRI+ELGGPDYAANAPKSYDADGRELPGGGGYMYFGAAK LPGVRELFHKSDVENPRRTRKDMYQFITPDYYGYRDEEDGVLVAKEAV EKRKVQ AV EWQAEKRRR+EDGEEE GG ADDE XXXXXX SA+VRAHVPVPSQDAIKEAILKRKKL LLKRLDG E + +IED
Sbjct: 1 MARNEEKAQMMMNKWTTMKEQMAKPERGRRPFLSSECDNLQDAELWRRDIIRETSKSVHLIQNAGAGEHKIRDLNDQINKLLRERTHWDKRILELGGPDYAANAPKSYDADGRELPGGGGYMYFGAAKGLPGVRELFHKSDVENPRRTRKDMYQFITPDYYGYRDEEDGVLVAKEAVMEKRKVQSAVSEWQAEKRRRLEDGEEEAGGDADDEXXXXXXXXXXXXXXXXXSAEVRAHVPVPSQDAIKEAILKRKKLTLLKRLDGEEDAADGEIED 274
BLAST of mRNA_P-littoralis_Contig64.77.1 vs. uniprot
Match: W7TA77_9STRA (Pre-mrna-splicing factor isy1 n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TA77_9STRA) HSP 1 Score: 277 bits (709), Expect = 7.920e-87 Identity = 156/270 (57.78%), Postives = 187/270 (69.26%), Query Frame = 3
Query: 222 MARNEEKAQMMMNKWTTMKEQMAKPERGRRPFLSSECDNLQDAELWRRDIIRETTKSVHLIQNAGAGEHKIRDLNDQINKLLRERTHWDKRIVELGGPDYAANAPKSYDADGRELPGGGGYMYFGAAKDLPGVRELFHKSDVENPRRTRKDMYQFITPDYYGYRDEEDGVLVAKEAVTEKRKVQEAVLEWQAEKRRRVEDGEEEEGGADDEDVQDVQGQAAXXXXXXT-----------SAQVRAHVPVPSQDAIKEAILKRKKLALLKR 998
MARNEEKAQ M+NKW TMK+ +A ++ RRPFLSS+C L +AE WRR II+E TK V +QNAG GEH++RDLNDQINKLLRE+ HW KRI ELGGPDY P++YDADGRELPGGGGY YFGAAKDLPGV+ELF KS + RRTR DMY+ I PDYYGYRDEEDG+L+ KE EK + AV +++ R +GEE E G XXXXXX SA V+AHVPVP Q+ I A++++KK ALL +
Sbjct: 1 MARNEEKAQAMLNKWLTMKKDLATGDKERRPFLSSDCHVLSEAERWRRQIIKEVTKKVSEVQNAGLGEHRLRDLNDQINKLLREKYHWQKRIKELGGPDYNRIEPRAYDADGRELPGGGGYRYFGAAKDLPGVKELFQKSAPKEMRRTRGDMYKGIDPDYYGYRDEEDGILLEKEREAEKEAIAAAVRQFKKRAREEKGEGEETEXGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSAAVKAHVPVPCQEDIMTALMEKKKRALLSK 270
BLAST of mRNA_P-littoralis_Contig64.77.1 vs. uniprot
Match: A0A7S2S7Y0_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2S7Y0_9STRA) HSP 1 Score: 270 bits (691), Expect = 7.080e-84 Identity = 153/287 (53.31%), Postives = 192/287 (66.90%), Query Frame = 3
Query: 222 MARNEEKAQMMMNKWTTMKEQMAK---PERGRRPFLSSECDNLQDAELWRRDIIRETTKSVHLIQNAGAGEHKIRDLNDQINKLLRERTHWDKRIVELGGPDYAANAPKSYDADGRELPGGGGYMYFGAAKDLPGVRELFHKSDVENPRRTRKDMYQFITPDYYGYRDEEDGVLVAKEAVTEKRKVQEAVLEWQAEKRRRVE----DGEE-----------EEGGADDEDVQDVQGQAAXXXXXXTSAQVRAHVPVPSQDAIKEAILKRKKLALLKRL------DGG 1010
MARNEEKA ++NKW TMK + AK P+R RP+L++ECD+L+ AE WR D+I+E +K + IQNAG GEH+IRDLNDQINKLLRE+ HW KRI ELGGPDY A P+S+DADGRELPGGGGY YFGAAK+LPGVRELF + PRRTR +Y+ ITPDYYGYRDE+D L+ KEA+ EK ++EA + Q KR+R +GE ++ A G+A +S +AHVPVPSQD +K+AIL +K LL++L DGG
Sbjct: 1 MARNEEKAMSLLNKWVTMKSEFAKGGGPQR--RPYLATECDDLRQAERWRLDVIKEVSKGIGEIQNAGLGEHRIRDLNDQINKLLREKFHWQKRIRELGGPDYNAIEPRSFDADGRELPGGGGYKYFGAAKELPGVRELFQAEAPQRPRRTRAQIYKTITPDYYGYRDEDDEDLLRKEALAEKEAIEEADAQHQRLKRQRXXXXXXNGEXXXXXXXXXXXXDDAAAMAAAAHSNFGEAMARASAASSTVAKAHVPVPSQDEVKQAILDHRKQQLLQQLGVAPSSDGG 285
BLAST of mRNA_P-littoralis_Contig64.77.1 vs. uniprot
Match: K3X334_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3X334_GLOUD) HSP 1 Score: 239 bits (611), Expect = 4.770e-73 Identity = 112/189 (59.26%), Postives = 149/189 (78.84%), Query Frame = 3
Query: 222 MARNEEKAQMMMNKWTTMKEQMAKPERGRRPFLSSECDNLQDAELWRRDIIRETTKSVHLIQNAGAGEHKIRDLNDQINKLLRERTHWDKRIVELGGPDYAANAPKSYDADGRELPGGGGYMYFGAAKDLPGVRELFHKSDVENPRRTRKDMYQFITPDYYGYRDEEDGVLVAKEAVTEKRKVQEAVLE 788
MARNEEKAQ ++N+WT+MK+ + + RRP+L+S+CDN++DAE WRR IIRE +K V IQNAG+GEH IRDLND+INK +RE+ HW+KRIVELGGPDY+ + P++YDADG + GGGGY YFGAAK+LPGVRELF K + +RTR+DM++ I PDYYG+RDEED + +E + + +Q+A +E
Sbjct: 1 MARNEEKAQSLLNRWTSMKQDFSDTFKNRRPYLASQCDNIKDAERWRRQIIREISKKVADIQNAGSGEHVIRDLNDEINKRMREKRHWEKRIVELGGPDYSRSQPQAYDADGSSVQGGGGYKYFGAAKNLPGVRELFQKEERAPKKRTRQDMFKNIEPDYYGFRDEEDDPQLLQEELEVEAALQKAAIE 189
BLAST of mRNA_P-littoralis_Contig64.77.1 vs. uniprot
Match: UPI000C03B492 (pre-mRNA-splicing factor ISY1 homolog n=3 Tax=Astrocoeniina TaxID=123757 RepID=UPI000C03B492) HSP 1 Score: 240 bits (612), Expect = 3.480e-72 Identity = 136/271 (50.18%), Postives = 176/271 (64.94%), Query Frame = 3
Query: 222 MARNEEKAQMMMNKWTTMKEQMA-KPERGRRPFLSSECDNLQDAELWRRDIIRETTKSVHLIQNAGAGEHKIRDLNDQINKLLRERTHWDKRIVELGGPDYAANAPKSYDADGRELPGGGGYMYFGAAKDLPGVRELFHKSDVENPRRTRKDMYQFITPDYYGYRDEEDGVLVAKEAVTEKRKVQEAVLEWQAEKRR----RVEDGEEE-------EGGADDEDVQDVQGQAAXXXXXXTSAQVRAHVPVPSQDAIKEAILKRKKLALLKR 998
MARN EKA M+ +W ++ + A K + RRPFL++ECDNLQ+AE WR+ IIRE K V IQNAG GE +IRDLND+INKLLRE+ HW+ RI ELGGPDYA PK D +G+E+PG GY YFGAAKDLPGVRELF + PR+TR ++Y+ + DYYGYRDE+DGVLV E EK + A+ EW+ +K +D EEE E DED++ Q + AHVPVPSQ ++E +++RKK+ LL++
Sbjct: 1 MARNAEKAMTMLARWYDLQRKEAGKGIKERRPFLATECDNLQEAEKWRQQIIREVAKKVAQIQNAGLGEFRIRDLNDEINKLLREKRHWEDRIKELGGPDYAKIGPKMLDHEGKEVPGNRGYKYFGAAKDLPGVRELFEQEPPAPPRKTRGELYKDVDADYYGYRDEDDGVLVPLEQEVEKEAIARALDEWERKKEAGELVTEQDQEEENIYAVTKEQEESDEDMETDQTEEGNQPFV-------AHVPVPSQKEVEEMLVQRKKMELLEK 264
BLAST of mRNA_P-littoralis_Contig64.77.1 vs. uniprot
Match: A0A2C9JS12_BIOGL (Uncharacterized protein n=1 Tax=Biomphalaria glabrata TaxID=6526 RepID=A0A2C9JS12_BIOGL) HSP 1 Score: 239 bits (610), Expect = 9.440e-72 Identity = 136/276 (49.28%), Postives = 180/276 (65.22%), Query Frame = 3
Query: 222 MARNEEKAQMMMNKWTTMKEQMAKPERGRRPFLSSECDNLQDAELWRRDIIRETTKSVHLIQNAGAGEHKIRDLNDQINKLLRERTHWDKRIVELGGPDYAANAPKSYDADGRELPGGGGYMYFGAAKDLPGVRELFHKSDVENPRRTRKDMYQFITPDYYGYRDEEDGVLVAKEAVTEKRKVQEAVLEWQAEKRRRVEDGE---EEEGGA-------------DDEDVQDVQGQAAXXXXXXTSAQ-VRAHVPVPSQDAIKEAILKRKKLALLKR 998
MARN EKA + +W + K E+ RRP+L+S+CDNLQ+AE WRR II E ++ V IQNAG GE K+RDLND+INKLLRE+ HW+ RIVEL GPDY PK D+DG+E+PG GY YFGAAKDLPGVRELF + PR+TR ++ + I DYYGYRDE+DG+++ EA EK+ ++ V EW+ EK+ +V+ GE EE GA DDE+ + ++ + Q AHVPVPSQ I++A+L RKK+ L++R
Sbjct: 1 MARNSEKAMTTLARWRASQVGGIK-EKERRPYLASDCDNLQEAEKWRRQIIGEISRKVAQIQNAGLGEFKLRDLNDEINKLLREKGHWEDRIVELNGPDYKKTGPKMLDSDGKEVPGNKGYKYFGAAKDLPGVRELFDQEPAPAPRKTRAELMKDIDADYYGYRDEDDGIIIPLEAEVEKQVIKTKVQEWK-EKQNKVQTGEMTHEEAHGAEEELFSKEALAEKDDEEDESLKPSTSKDFYREFDKQHFIAHVPVPSQKEIEQALLHRKKMELIQR 274
BLAST of mRNA_P-littoralis_Contig64.77.1 vs. uniprot
Match: UPI0003597C0E (pre-mRNA-splicing factor ISY1 homolog n=1 Tax=Aplysia californica TaxID=6500 RepID=UPI0003597C0E) HSP 1 Score: 239 bits (610), Expect = 9.440e-72 Identity = 136/276 (49.28%), Postives = 178/276 (64.49%), Query Frame = 3
Query: 222 MARNEEKAQMMMNKWTTMKEQMAKPERGRRPFLSSECDNLQDAELWRRDIIRETTKSVHLIQNAGAGEHKIRDLNDQINKLLRERTHWDKRIVELGGPDYAANAPKSYDADGRELPGGGGYMYFGAAKDLPGVRELFHKSDVENPRRTRKDMYQFITPDYYGYRDEEDGVLVAKEAVTEKRKVQEAVLEWQAEKRRRVEDGE--EEEG-------------GADDEDVQDVQGQAAXXXXXXTSAQVR--AHVPVPSQDAIKEAILKRKKLALLKR 998
MARN EKA + +W + K E+ RRP+L+S+CDNL +AE WRR II E ++ V IQNAG GE K+RDLND+INKLLRE+ HW+ RI+ELGGPDY PK D+DG+E+PG GY YFGAAKDLPGVRELF + PR+TR ++ + I DYYGYRDE+DG++V +E E++ + V EW+ EK+ +V+ GE EEE DD +VQ+V+ + R AHVPVPSQ I+ A+L RKK+ LL+R
Sbjct: 1 MARNSEKAMTTLARWRASQVGEIK-EKDRRPYLASDCDNLHEAEKWRRQIIGEISRKVAQIQNAGLGEFKLRDLNDEINKLLREKGHWEDRILELGGPDYRKTGPKMLDSDGKEVPGNKGYKYFGAAKDLPGVRELFEQEPPPPPRKTRAELMKDIDADYYGYRDEDDGIIVPQELEAERKAISSKVREWK-EKQNKVKSGEMTEEEATGKEEELFTAAELAEDDLEVQEVEMEPTESTSDLDLDNQRFIAHVPVPSQKEIEAALLMRKKMELLQR 274
BLAST of mRNA_P-littoralis_Contig64.77.1 vs. uniprot
Match: UPI001884C45C (pre-mRNA-splicing factor ISY1 homolog n=1 Tax=Pollicipes pollicipes TaxID=41117 RepID=UPI001884C45C) HSP 1 Score: 238 bits (608), Expect = 1.060e-71 Identity = 134/270 (49.63%), Postives = 170/270 (62.96%), Query Frame = 3
Query: 222 MARNEEKAQMMMNKWTTMKEQMAKPERGRRPFLSSECDNLQDAELWRRDIIRETTKSVHLIQNAGAGEHKIRDLNDQINKLLRERTHWDKRIVELGGPDYAANAPKSYDADGRELPGGGGYMYFGAAKDLPGVRELFHKSDVENPRRTRKDMYQFITPDYYGYRDEEDGVLVAKEAVTEKRKVQEAVLEWQAEKRRRVEDGEEEEGGADDEDVQDVQGQAAXXXXXXTSAQVRAHVPVPSQDAIKEAILKRKKLALLKRLDGGEATPEDD 1031
MARN EKA + +W + A PE+ RRP+L+SECD L DAE WR I+RE + V IQNAG GE +IRDLND+INKLLRE+ HW+ RI ELGGPDYA PK D +G+E+PG GY YFGAA+DLPGVRELF + PR+TR ++ + I DYYG+ D+EDGVLV +E E+R V + EW+A K V D EE + A D D ++ AA AHVPVPSQ ++ A+++RKK LL R E+D
Sbjct: 1 MARNAEKAMTTLARWRQAHSE-AGPEKTRRPYLASECDQLPDAERWRNQIVREVARKVAQIQNAGLGEFRIRDLNDEINKLLREKGHWEARIKELGGPDYARTGPKMLDREGKEVPGNRGYRYFGAARDLPGVRELFEQEPPPPPRKTRAELMKDIDADYYGFLDDEDGVLVPREREQERRAVAAWLAEWRARKEAGV-DTEEGDAPAHDVDSEEETDAAAPRFV--------AHVPVPSQQEVEAALVERKKRELLARYASQALVDEED 260
BLAST of mRNA_P-littoralis_Contig64.77.1 vs. uniprot
Match: H3GPB1_PHYRM (Uncharacterized protein n=3 Tax=Phytophthora TaxID=4783 RepID=H3GPB1_PHYRM) HSP 1 Score: 235 bits (600), Expect = 1.950e-71 Identity = 112/192 (58.33%), Postives = 146/192 (76.04%), Query Frame = 3
Query: 222 MARNEEKAQMMMNKWTTMKEQMAKPERGRRPFLSSECDNLQDAELWRRDIIRETTKSVHLIQNAGAGEHKIRDLNDQINKLLRERTHWDKRIVELGGPDYAANAPKSYDADGRELPGGGGYMYFGAAKDLPGVRELFHKSDVENPRRTRKDMYQFITPDYYGYRDEEDGVLVAKEAVTEKRKVQEAVLEWQA 797
MARNEEKAQ ++N+WT+MK+ A + RRP+L+S+CDNL+DAE WRR I+RE +K V IQNAG+ EH IRDLND+INK +RE+ HW++RIV+LGG +YA + P++YDADG E+ G GGY YFGAAK+LPGVRELF K + E +R+R+DMY+ I PDYYG+RD+ED + E E R Q A+ W A
Sbjct: 1 MARNEEKAQSLLNRWTSMKQDFADTFKNRRPYLASQCDNLKDAERWRRQIVREISKKVADIQNAGSSEHVIRDLNDEINKRIREKRHWERRIVQLGGTNYARSQPQAYDADGSEVRGAGGYKYFGAAKNLPGVRELFQKEEPEARKRSRQDMYKHIEPDYYGFRDDEDEQQLKDEEEAENRLRQRALDGWDA 192
BLAST of mRNA_P-littoralis_Contig64.77.1 vs. uniprot
Match: D0NZZ7_PHYIT (Pre-mRNA-splicing factor ISY1 n=19 Tax=Phytophthora TaxID=4783 RepID=D0NZZ7_PHYIT) HSP 1 Score: 234 bits (598), Expect = 4.010e-71 Identity = 113/192 (58.85%), Postives = 144/192 (75.00%), Query Frame = 3
Query: 222 MARNEEKAQMMMNKWTTMKEQMAKPERGRRPFLSSECDNLQDAELWRRDIIRETTKSVHLIQNAGAGEHKIRDLNDQINKLLRERTHWDKRIVELGGPDYAANAPKSYDADGRELPGGGGYMYFGAAKDLPGVRELFHKSDVENPRRTRKDMYQFITPDYYGYRDEEDGVLVAKEAVTEKRKVQEAVLEWQA 797
MARNEEKAQ ++N+WT+MK+ A + RRP+L+S+CD L+DAE WRR IIRE +K V IQNAG+ EH IRDLND+INK +RE+ HW++RI +LGGPDY+ + P+SYDADG + GGY YFGAAK+LPGVRELF K DVE +RTR+ MY+ I PDYYG+RD++D + E EKR Q A+ W A
Sbjct: 1 MARNEEKAQSLLNRWTSMKQDFADTFKNRRPYLASQCDTLKDAERWRRQIIREISKKVADIQNAGSSEHVIRDLNDEINKRIREKRHWERRIAQLGGPDYSKSQPQSYDADGTPVSSVGGYKYFGAAKNLPGVRELFQKEDVEPRKRTRQHMYKHIKPDYYGFRDDDDEQQLKDEDEAEKRLRQRAMDGWDA 192 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig64.77.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig64.77.1 >prot_P-littoralis_Contig64.77.1 ID=prot_P-littoralis_Contig64.77.1|Name=mRNA_P-littoralis_Contig64.77.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=274bp MARNEEKAQMMMNKWTTMKEQMAKPERGRRPFLSSECDNLQDAELWRRDIback to top mRNA from alignment at P-littoralis_Contig64:344799..348621- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig64.77.1 ID=mRNA_P-littoralis_Contig64.77.1|Name=mRNA_P-littoralis_Contig64.77.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=3823bp|location=Sequence derived from alignment at P-littoralis_Contig64:344799..348621- (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig64:344799..348621- >mRNA_P-littoralis_Contig64.77.1 ID=mRNA_P-littoralis_Contig64.77.1|Name=mRNA_P-littoralis_Contig64.77.1|organism=Pylaiella littoralis U1_48|type=CDS|length=822bp|location=Sequence derived from alignment at P-littoralis_Contig64:344799..348621- (Pylaiella littoralis U1_48)back to top |