mRNA_P-littoralis_Contig64.45.1 (mRNA) Pylaiella littoralis U1_48
|
Overview
Homology
BLAST of mRNA_P-littoralis_Contig64.45.1 vs. uniprot
Match: D8LQ67_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQ67_ECTSI) HSP 1 Score: 838 bits (2166), Expect = 5.320e-281 Identity = 587/1152 (50.95%), Postives = 696/1152 (60.42%), Query Frame = 1
Query: 880 PSLAGPSCVSTRDGGHDRLDLEFILDAIENEVDLGGESFGFNGNDDDNDDFATGSKLGGLHSNATASDDSSSDASPDPGALEAQRDRNARLAGLLQMLSRHLDPAARKTTSSSGVFAVGKVHRYPGARRSHRNPDDPERTEDINNNKESSTFCTVRAFEVLVEVMDRPRGPADASPPSITELPTLLAAQLIVSL----GTPSLLSTRATSGTXXXXXXXXXXXXLLMKACRQLFEVSKKAGADEAFFSSGVVPALLGLAEGAASGFDSISGEFFHEGDXXXXXXXXXXXXXXXXXXXXLRIRASGQSTDGGDKTLGDTNNHVSSDSDTSRDGITRGTTDNFGGSGEHIGSICDSLTFAVGCLKNISAGEDLRHRLVQEGAIRHLCRLARSIRELCRRNDEFQRQRNT--RSSRRVLADNCHEAAHVSKTSLDASNSASTDDIGQGVR--RGICRVPLIRRRVSPLLAQAINLLRDLAVGGKDRSERFCAAGAARTLCSILRPFGNHQDVVLNAARALAKLSLQEKTRGEINSDPGHARDLLAALIEQGRTIDGSFGDLVTTDQSSSXXXXXXXXXXTGAADAAIPVDPVDRRRRWEKQEKCVAACVRIAFALGNLTSGSDENRGLIGILHGGAESLPALLQTSARAHLAAWNCLCGAQTNPFASADWSTEGVGDGAWGG-GSRDSFLGECWARNTLRRACDGLEEMLVKTVRLLANISINREVGQLVCRQPGLVALEPLVGKCLELFALFEDGALPQANARVQPGGRCRSRNGGRHGAAGPGEQVTMPGEELLLNTVSLVTNLSFYGPSANS--PAASLGRASPKTSVKVEVRDSSDAVSCKSGTEYLASAPAAGPPQMSFLFSLASRARRGVDKREELSTCTAVMPTSGSVGHNSCEGKQARGIGDESGEAVGTPLTSTPSQSLPPGTTDA------GGRTCD-VLCGQLVKVLLYPNAEAVAEAARAFGNFSRDPSCRAAMARRRADDVLVALXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSRESVGAGDRLARLVRRAGLADPGLAELACKALHNLLIEPLPAGGVEEVLGGPETYKRLWWTLKELMGACERPEAESPRGGGRSWGAGGVALADRGREGVEPSEVEGFPAAARAIWSALNEGGVNCEA 4281
P+ PS VS+ D L EFILDAI+NEVDL FGF+ DDD +D A G + DD SD PDPGALE QR+R+ARL GLLQM SRHLD A + + GA+R ++ P D E T RA VL VMDRP ADASP ++TELP LLAA+L+V L P+ LS++ T LL+KACR +FEVSKK ADEAFFSSG V +LG E +AS DSISG F + S T ++ D +N S DSD GG H+G I DSLTF+VGCLKNISA + LR RLVQ G+IR LCRL RS R+LC R + Q+Q+ ++S R + +E + ++ AS + +++G G + +G+ V L+RRRVSPLLAQAI L+RDL V + ++R AAG TLCSILRPF NHQDVVLN +RALA+LSL + TR I S+PGH RDLLAAL+EQ R ID F + + SS A V PV+ R+ WE Q K VA CVRIAFALGNLTS SDENR LIG+ GGAESLPA L + +R + AW CLC +T+ AS D TE AWG G+ LGECWAR TLRRAC GLEEMLVK VRLLANISI+R+VGQ VCR PGLVALEPL+GKCLEL+ L EDGALPQA Q G RC S+ G AGP E T+PGEELLLN V L+TNLS+YGP+A + P++ + RA P S S V G E SA PPQ + LF+LA +ARR VD+ +E + T GSV ++ + R G E VG P + SQ P T GGRT + VLCG LVKVLL+PNAEAVAEAARAFGNFSRDPSCR A+ RRRAD+VLVAL XXXXXXXXXXXXXXXXXXXXXXXXXXX RESVGAG+RLARLVRRAGLADPG+AELAC+ALHNLLIEP GV+ VLG PET+K+LWWTLKELM AC R R GA A+ R E+EGF AAA A+W A+NE V+C A
Sbjct: 39 PTERRPSLVSSGDDAQ-CLGQEFILDAIDNEVDLSRRDFGFD--DDDEEDVA------GQRQTQSIPDDDRSDGPPDPGALEGQRERSARLTGLLQMFSRHLDHANEEERV--------RGRHTDGAKRENQGPTDVEAP-------------TARALVVLSRVMDRPLRAADASPTTVTELPALLAARLVVDLVLRLPLPAPLSSKPTEEDGTGGDGWSARQQLLVKACRHMFEVSKKPDADEAFFSSGAVTGVLGFVELSASHLDSISGASFRKNPEREERPELVSVEYSSACIGDAGAHNSSNRTRCSSSSIADDSN-ASGDSD-------------LGGCVRHVGGIYDSLTFSVGCLKNISADQGLRDRLVQAGSIRALCRLVRSTRDLCGRCERSQKQQEETLQTSIRRVPTTENEEQTKAAVNVRASADSGGEEVGIGEQDEKGLDCVDLLRRRVSPLLAQAIGLVRDLVVD--ETNDRVRAAGVVSTLCSILRPFRNHQDVVLNTSRALARLSLHQPTRELIASEPGHVRDLLAALLEQSRDIDPGFKSIEEGYRDSSR-----------ATSTTAAVAPVEHRQHWENQGKRVATCVRIAFALGNLTSASDENRRLIGLRLGGAESLPAFLHSFSRDYFMAWECLCSVETHHAASVDGITETGRSSAWGARGAPAVVLGECWARRTLRRACYGLEEMLVKAVRLLANISIHRDVGQRVCRHPGLVALEPLLGKCLELYVLSEDGALPQAGLCDQRGKRCWSQGGDWGSGAGPTEAATIPGEELLLNAVCLITNLSYYGPAAANCTPSSPVRRALPSISSTRTPAGVSRVVDRSDGVEPSVSAALGRPPQGNILFALAGKARRDVDEEQE-----TIASTGGSVEKSA----RPRPDGCFREEVVGAPALAVTSQRCRPATGSGEYGGGTGGRTREEVLCGHLVKVLLHPNAEAVAEAARAFGNFSRDPSCRRALTRRRADEVLVALIXXXXXXXXXXXXXXXXXXXXXXXXXXXLCRESVGAGERLARLVRRAGLADPGMAELACQALHNLLIEP--GLGVDAVLGSPETFKKLWWTLKELMEACSCEAQGVERHRERDRGAQFAAVGGHSRNS---RELEGFLAAATAVWRAMNEDSVDCMA 1119
BLAST of mRNA_P-littoralis_Contig64.45.1 vs. uniprot
Match: A0A6H5L021_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L021_9PHAE) HSP 1 Score: 805 bits (2078), Expect = 2.780e-268 Identity = 581/1143 (50.83%), Postives = 687/1143 (60.10%), Query Frame = 1
Query: 895 PSCVSTRDGGHDRLDLEFILDAIENEVDLGGESFGFNGNDDDNDDFATGSKLGGLHSNATASDDSSSDASPDPGALEAQRDRNARLAGLLQMLSRHLDPAARKTTSSSGVFAVGKVHRYPGARRSHRNPDDPERTEDINNNKESSTFCTVRAFEVLVEVMDRPRGPADASPPSITELPTLLAAQLIVSL----GTPSLLSTRATS---GTXXXXXXXXXXXXLLMKACRQLFEVSKKAGADEAFFSSGVVPALLGLAEGAASGFDSISGEFFHEGDXXXXXXXXXXXXXXXXXXXXLRIRASGQSTDGGDKTLGDTNNHVSSDSDTSRDGITRGTTDNFGGSGEHIGSICDSLTFAVGCLKNISAGEDLRHRLVQEGAIRHLCRLARSIRELCRRNDEFQRQRNTR---SSRRVLADNCHEAAHVSKTSLDASNSASTD-DIGQGVRRGICRVPLIRRRVSPLLAQAINLLRDLAVGGKDRSERFCAAGAARTLCSILRPFGNHQDVVLNAARALAKLSLQEKTRGEINSDPGHARDLLAALIEQGRTIDGSFGDLVTTDQSSSXXXXXXXXXXTGAADAAIPVDPVDRRRRWEKQEKCVAACVRIAFALGNLTSGSDENRGLIGILHGGAESLPALLQTSARAHLAAWNCLCGAQTNPFASADWSTEGVGDGAWGG-GSRDSFLGECWARNTLRRACDGLEEMLVKTVRLLANISINREVGQLVCRQPGLVALEPLVGKCLELFALFEDGALPQANARVQPGGRCRSRNGGRHGAAGPGEQVTMPGEELLLNTVSLVTNLSFYGPSA-NSPAASLG-RASPKTSVKVEVRDSSDAVSCKSGTEYLASAPAAGPPQMSFLFSLASRARRGVDKREELSTCTAVMPTSGSVGHNSCEGKQARGIGDESGEAVGTPLTSTPSQSLPPGTTDA------GGRTCD-VLCGQLVKVLLYPNAEAVAEAARAFGNFSRDPSCRAAMARRRADDVLVALXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSRESVGAGDRLARLVRRAGLADPGLAELACKALHNLLIEPLPAGGVEEVLGGPETYKRLWWTLKELMGACERPEAESPRGGGRSWGAGGVALADRGREGVEPSEVEGFPAAARAIWSALNE 4260
P+ VS GH L EFILDAI+NEVDL FGF+ +D++ D + G + DD SD PDPGALE QR+R+ARL GLLQM SRHLD A+ + V H GA+R ++ D E T RA +L VMDRP ADASP ++TELPTLLAA+L+V L PSL ++ T GT LL+KACR +FEVSKK ADEAFFSSG V +L E +AS DSISG F + + + S GD +++N S S + D + GG H+G I DSLTF+VGCLKNISA + LR RLVQ G+IR LC+L RS R+LC R + Q+Q+ S RRV E + ++++ + IG +G+ V L+RRRVSPLLAQAI L+RDLA+ + S R AAG TLCSI RPF NHQDVVLNAARALA+LSL + TRG I S+PGH RDLLAAL+EQG ID F + + S A V PV+ R+ W+ Q K VA CVRIAF LGNLTS SDENR LIG GGAESLP+ L T +RA+L AW CLC +T+ AS D TE AWG G+ LGECWAR TLRRAC GLEEMLVK VRLLANISI+R+VGQ VCR PGLVALEPL+GKCLEL+ L++DGALPQA R Q G RC S+ G AGP E T+PGEELLLN V L+TNLS+YGP+A N AAS G R P S S V G E SA PP + LF+LA +ARR VD+ +E T S G + + +AR G E VG P + SQS P T GGRT + VLCG LVKVLL+PNAEAVAEAARAFGNFSRDPSCR A+ RRRAD+VLVAL XXXXXXXXXXXXXXXXXXXXXXXXXXXX E VGAG+RL RLVRRAGLADPG+A+LAC+ALHNLLIEP GV+ VLG P+T+K+LW TLKELM AC R R GA A+ RG P E+EG AAA A+W A+NE
Sbjct: 11 PTLVSAGYDGH-CLGQEFILDAIDNEVDLSRRDFGFDDDDEEED-------VAGQWHTQSIPDDDRSDGPPDPGALEGQRERSARLTGLLQMFSRHLDHASEEER-------VRDRHTN-GAKRKNQGSTDVETP-------------TARALVILSRVMDRPLRAADASPTTVTELPTLLAARLVVGLVLRFPLPSLRPSKPTEEEDGTGGDVWSARQQ--LLVKACRHMFEVSKKPDADEAFFSSGAVTGVLEFVELSASRLDSISGASFRKNPEREGEKPEL-----------VSVEYSNACI--GDAGAHNSSNRTSCSSSSIADDSNASGDRDLGGCVWHVGGIYDSLTFSVGCLKNISADQGLRDRLVQAGSIRALCKLVRSTRDLCGRCERSQKQQEEAIQTSLRRVPPTENEEQTKAADDVRESADPGGGEVGIGGQDEKGLDCVDLLRRRVSPLLAQAIGLVRDLALDETNDSVR--AAGFVSTLCSIFRPFRNHQDVVLNAARALARLSLHQPTRGLITSEPGHVRDLLAALLEQGGKIDAGFESIEEGYEDPSR-----------ATSTTAAVAPVEHRQHWDNQGKRVATCVRIAFTLGNLTSASDENRRLIGFRFGGAESLPSFLHTFSRAYLMAWECLCSVKTHHAASVDGITETGSITAWGARGTPTVVLGECWARRTLRRACYGLEEMLVKAVRLLANISIHRDVGQQVCRHPGLVALEPLLGKCLELYVLYQDGALPQAGLRDQQGKRCWSQGGDWGSGAGPVEAATIPGEELLLNAVCLITNLSYYGPTAANCTAASPGGRTPPSISSTGTPAGVSRVVGRSDGVEPSVSAALGRPPHGNILFALAGKARRDVDEEQE---------TIASTGDSVEKSARARPDGCLRQEVVGAPALAVTSQSYRPATGSGEYGGGTGGRTREEVLCGHLVKVLLHPNAEAVAEAARAFGNFSRDPSCRRALTRRRADEVLVALIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXERVGAGERLVRLVRRAGLADPGMADLACQALHNLLIEP--GLGVDAVLGSPKTFKKLWRTLKELMEACSCEAHCFERHRKRDRGARFAAV--RGHSRNSP-ELEGLLAAATAVWRAMNE 1082
BLAST of mRNA_P-littoralis_Contig64.45.1 vs. uniprot
Match: F0YDU6_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YDU6_AURAN) HSP 1 Score: 148 bits (373), Expect = 1.180e-32 Identity = 174/630 (27.62%), Postives = 234/630 (37.14%), Query Frame = 1
Query: 2230 RRRVSPLLAQAINLLRDLAVGGKDRSERFCAAGAARTLCSILRPFGN-HQDVVLNAARALAKLSLQEKTRGEINSDPGHARDLLAAL--IEQGRTIDGSFGDLVTTDQSSSXXXXXXXXXXTGAADAAIPVDPVDRRRRWEKQEKCVAACVRIAFALGNLTSGSDENRGLIGILHGGAESLPALLQTSARAHLAAWNCLCGAQTNPFASADWSTEGVGDGAWGGGSRDSFLGECWARNTLRRACDGLEEMLVKTVRLLANISINREVGQLVCRQPGLVALEPLVGKCLELFALFEDGALPQANARVQPGGRCRSRNGGRHGAAGPGEQVTMPGEELLLNTVSLVTNLSFYGPSANSPAASLGRASPKTSVKVEVRDSSDAVSCKSGTEYLASAPAAGPPQMSFLFSLASRARRGVDKREELSTCTAVMPTSGSVGHNSCEGKQARGIGDESGEAVGTPLTSTPSQSLPPGTTDAGGRTCDVLCGQLVKVLLYPNAEAVAEAARAFGNFSRDPSCRAAMARRRADDVLVALXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSRESVGAGDRLARLVRRAGLADPGLAELACKALHNLLIEPLPAGGVEEVLGGPETYKRLWWTLKELMGACE 4110
+++V+ LL Q LR++ K + + AA AA L + LRPFG + ++ LN ARALAKLSL E TR ++ DP D+LA L +G G + +DA P+ A +R+AFALGNLT+ +D NR ++GI HGGA L A+L+ S A LA GGG D+ E++L+K +RL+AN+SIN +VG LV PG+ +L L+ L+ RSR EEL+LN VS +TNLS+Y V H + R G + E++ D G CG L+ LL+ N+EAV+E ARAFGNFSRD + R M AD+ LV L R+ +G L +VRRAGL D LA +ACKALHNLL+E GG +LG + RL TL EL+ A E
Sbjct: 314 KKQVAQLLVQVSGALRNMCAE-KSQLRQLGAARAATALAACLRPFGTRYWELTLNVARALAKLSLHEPTRTALHGDPKRLGDVLATLEAAHEGALALGGTAE---------------------PSDALAPMP---------------AVVLRLAFALGNLTASNDANRVVLGIDHGGALPLVAMLEKSGAAFLA----------------------------GGGGDDA------------------EQVLIKLIRLVANMSINPDVGVLVANAPGVRSLTRLLRVALD-----------------------RSR------------------EELVLNIVSAITNLSYY-----------------------------------------------------------------------------------VTH-----RPPRAYGFKEDESL---------------FADHGAT-----CGGLLDALLHDNSEAVSETARAFGNFSRDAAARRIMRDVGADEALVLLLVHTSRDVAFAAAGALVNVAADPATKGILLRDDLGGTRELVEIVRRAGLQDLALAAVACKALHNLLLEA-EVGGAAALLGA-RVHGRLRDTLAELVDAAE 709
BLAST of mRNA_P-littoralis_Contig64.45.1 vs. uniprot
Match: A0A7S2HFV9_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2HFV9_9STRA) HSP 1 Score: 140 bits (354), Expect = 1.920e-30 Identity = 185/751 (24.63%), Postives = 269/751 (35.82%), Query Frame = 1
Query: 1924 DSLTFAVGCLKNISAG-EDLRHRLVQEGAIRHLCRLARSIRELCRRNDEFQRQRNTRSSRRVLADNCHEAAHVSKTSLDASNSASTDDIGQGVRRGICRVPLIRRRVSPLLAQAINLLRDLAVGGKDRSERFCAAGAARTLCSILRPFGNHQDVVLNAARALAKLSLQEKTRGEINSDPGHARDLLAALIEQGRTIDGSFGDLVTTDQSSSXXXXXXXXXXTGAADAAIPVDPVDRRRRWEKQEKCVAACVRIAFALGNLTSGSDENRGLIGILHGGAESLPALLQTSARAHLAAWNCLCGAQTNPFASADWSTEGVGDGAWGGGSRDSFLGECWARNTLRRACDGLEEMLVKTVRLLANISINREVGQLVCRQPGLVALEPLVGKCLELFALFEDGALPQANARVQPGGRCRSRNGGRHGAAGPGEQVTMPGEELLLNTVSLVTNLSFYGPSANSPAASLGRASPKTSVKVEVRDSSDAVSCKSGTEYLASAPAAGPPQMSFLFSLASRARRGVDKREELSTCTAVMPTSGSVGHNSCEGKQARGIGDESGEAVGTPLTSTPSQSLPPGTTDAGGRTC-DVLCGQLVKVLLYPNAEAVAEAARAFGNFSRDPSCRAAMARRRADDVLVALXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSRESVGAGDRLARLVRRAGLADPGLAELACKALHNLLIEPLPAGGVEEVLGGPETY----------KRLWWTLKELM-GACERPEAESPRG 4137
D+ G +KN+SAG E + R+V G I +LAD A+ K+ S +S+ + + ++ LL Q +LR+L++ K+ + A G LC+I++PF H++++LN ARALAKLSL E R ++NS+ H DLL + + GS ++ S V ++ + VR+AF LGNLTSG++ NR IG+ G +SL +L + G + D T GG L + LEE+L+K +RL+AN+SI+ +G+ + +PG+ L PL+ + +GA EELLLN VS +TNLS+YG G Y+++ G + G D+R+ GH T D+ T +C +L+ VL+ N EAVAEAARAFGN SR P R M+ AD+ LV L E + RL L+R AGL DP LA + CKAL+NLL+ P Y +RL +L ELM AC+ E+E G
Sbjct: 140 DASVLLAGAVKNLSAGGEQAQQRIVSLGTIP------------------------------ILADILRTASQPQKSHARGSTQSSSHE----------------KLMAQLLVQTTGILRNLSLS-KNHFRQLAACGVPSGLCAIVKPFLRHKELMLNVARALAKLSLYEPLRCDMNSNVKHMEDLLRLMELTAGDLSGSLSVHHKPERQPS----------------------VSVESENTALQQPIQLLVRVAFTLGNLTSGNERNRLAIGVASNGGKSLMEVL-----------SLFHGYYSLAERDHDIDTFRSSISMNDGGGHVGLLSD-------------LEEILIKLIRLIANVSISYPIGRAMVIEPGVSDLVPLLQSAI-------------------------------YGAR----------EELLLNVVSAITNLSYYG--------------------------------NQGQAYVSATTQEGSQEP------------GEDRRD---------------GH----------------------------------TEDSRVFTAYREICAELLAVLVNDNYEAVAEAARAFGNLSRVPKVRRFMSESSADEALVMLLDHPSRDVIAAAAGTLVNIAADPACKDLLLNEELEGYSRLVCLLRSAGLRDPPLASVVCKALYNLLVNTPANTRSRRNTPPPPVYDPNSSLYSVTQRLRSSLDELMDAACQADESEKMYG 663
BLAST of mRNA_P-littoralis_Contig64.45.1 vs. uniprot
Match: A0A7R9UEL9_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UEL9_9STRA) HSP 1 Score: 118 bits (295), Expect = 6.320e-23 Identity = 199/773 (25.74%), Postives = 276/773 (35.71%), Query Frame = 1
Query: 1924 DSLTFAVGCLKNISAGEDLRHRLVQEGAIRHLCRLARSIRELCRRNDEFQRQRNTRSSRRVLADNCHEAAHVSKTSLDASNSASTDDIGQGVRRGICRVPLIRRRVSPLLAQAINLLRDLAVGGKDRSERFCAAGAARTLCSILRPFG---NHQDVVLNAARALAKLSLQEKTRGEINSDPGHARDL--LAALIEQGRTIDGSFGDLVTTDQSSSXXXXXXXXXXTGAADAAIPVDPVDRRRRWEKQEKCVAACVRIAFALGNLTSGSDENRGLIGILHGGAESLPALLQTSARAHLAAWNCLCGAQTNPFASADWSTEGVGDGAWGGGS----------RDSF-----------LGECWARNTLRRACDGLE--------------EMLVKTVRLLANISINREVGQLVCRQPGLVALEPLVGKCLELFALFEDGALPQANARVQPGGRCRSRNGGRHGAAGPGEQVTMPGEELLLNTVSLVTNLSFYGPSANSPAASLGRASPKTSVKVEVRDSSDAVSCKSGTEYLASAPAAGPPQMSFLFSLASRARRGVDKREELSTCTAVMPTSGSVGHNSCEGKQARGIGDESGEAVGTPLTSTPSQSLPPGTTDAGGRTCDVLCGQLVKVLLYPNAEAVAEAARAFGNFSRDPSCRAAMARRRADDVLVALXXXXXXXXXXXXXXXXXXXXXXXXXXXXXS-RESVGAGDRLARLVRRAGLADPGLAELACKALHNLLIEPLPAGGVEEVLGGPETYKRLWWTLKELMGACERPE 4119
+SL +A+G LKNISA R RL + GA+ LCR+ R +T L A SAS G G R C LL Q +R+L K ER GAA+ C + FG N +++L+AAR L KLS E R +INS ++ AAL++ + G + T +S + P + R + ++ VRI++ LGNLTS ++ENR +G G + +L+ T R +LA+ GA+ ASA G G G S DS L +R+ ++ D + + LVKT RLLAN++I+RE+G L L P G +G + RV AA G+ EEL+LN VS +TNLSFY P GR R + + EL T T+V L+++LL N EAVAEAARAFGNFSR R AM RAD+ LV L S + A +L ++R+AGL DP L+ L CK L+NLL++ + AG + V+G T++ + L+EL CE E
Sbjct: 491 ESLIYAIGVLKNISANSLARARLARLGAVPLLCRMLR------------------------------------RTHLLAKKSAS----GAGSDRRAC---------GQLLIQITATMRNLCSARKI-CERIAELGAAKEFCGLFATFGGERNTTELLLHAARCLGKLSCCEAARADINSTLANSSPSGGAAALLKVLDIRERPHGLGLITKESIGEE----------CSTLVPPSKAYAKAERKNLESSILSLVVRISYTLGNLTSSNEENRVALGERFNGVTIVSSLINTLGRCYLAS----SGARGAKDASAS-PRGGQGRSFKSGKSDVTDSDSXXXEDSLPKISAKAEAPRLSRPSSRSAKSKSADAAQYTVSIQNPPDNLLIDALVKTTRLLANMAIHREIGA------SLAVLSPGEG----------EGNIGDTLVRVVD-------------AAREGKS-----EELMLNAVSAITNLSFYDPRQ-------GRG------------------------------------------------RWIFEEREL-TITSV----------------------------------------------------------LLEILLCLNVEAVAEAARAFGNFSRHEGFRKAMRESRADEALVLLLQHPDRDVVCNSCGALINIAADKDHRRLFSCNHQLQAPTKLLDILRKAGLRDPSLSSLVCKTLYNLLMD-VEAGRIGAVVGS-RTFEAMVRALEEL---CETAE 1045
BLAST of mRNA_P-littoralis_Contig64.45.1 vs. uniprot
Match: A0A7S2SVZ7_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SVZ7_9STRA) HSP 1 Score: 80.5 bits (197), Expect = 6.850e-12 Identity = 129/504 (25.60%), Postives = 170/504 (33.73%), Query Frame = 1
Query: 2659 VAACVRIAFALGNLTSGSDENRGLIGILHGGAESLPALLQTSARAHLAAWNCLCGAQTNPFASADWSTEGVGDGAWGGGSRDSFLGECWARNTLRRACDGLEEMLVKTVRLLANISINREVGQLVCRQPGLVALEPLVGKCLELFALFEDGALPQANARVQPGGRCRSRNGGRHGAAGPGEQVTMPGEELLLNTVSLVTNLSFYGPSANSPAASLGRASPKTSVKVEVRDSSDAVSCKSGTEYLASAPAAGPPQMSFLFSLASRARRGVDKREELSTCTAVMPTSGSVGHNSCEGKQARGIGDESGEAVGTPLTSTPSQSLPPGTTDAGGRTCDVLCGQLVKVLLYPNAEAVAEAARAFGNFSRDPSCRAAMARRRADDVLVALXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSRESVGAGDRLARLVRRAGLADPGLAELACKALHNLLIE---PLPAG---------GVEEVLGGPETYKRLWWTLKELMGAC-ERPEAESP 4131
VA +R+AF+LGNLT+ ++ NR I + HGGA+ L LL + + + + E G+ G RDS G D EE+LVK +RL+AN+SI+ VG + PG+ L L+ L R R EELLLN VS +TNLSFYGP P + + V R LCG LV VLL+ N EAVAEAARAFGNFSR R M + RAD+ LV L +G +L ++R AGL D LA +A KAL N L + AG ++ VLGG + +RL +L+EL+ A E + E P
Sbjct: 34 VALLIRMAFSLGNLTASNEGNRCHI-LEHGGAQILVGLLHRATQHY----------------HLEVEAE-AGNVPEAGQRRDSQPGA---------GSDESEELLVKLIRLIANMSISPVVGPALAGSPGVEELADLLRHSLR-----------------------RQR------------------EELLLNAVSAITNLSFYGPD----------------------------------------PXXXXXXXXXXXXXXXXXXXXXXXXXKGTWRNLVF------------------------------------------------RRYKTLCGDLVGVLLHENEEAVAEAARAFGNFSRAAVARKFMTQSRADEALVILLDHSSREVVFAAAGALVNLGADPEAKEVLWLGELGGCTKLVEVLRCAGLKDLPLAAVAAKALFNALFDFTSDADAGKASAEQSLEDLDMVLGGGGSTERLRRSLEELLEAAREGADQEKP 381
BLAST of mRNA_P-littoralis_Contig64.45.1 vs. uniprot
Match: A0A8J2SRY3_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SRY3_9STRA) HSP 1 Score: 79.3 bits (194), Expect = 2.380e-11 Identity = 57/151 (37.75%), Postives = 73/151 (48.34%), Query Frame = 1
Query: 3658 DVLCGQLVKVLLYPNAEAVAEAARAFGNFSRDPSCRAAMARRRADDVLVALXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSRESVGAGDRLARLVRRAGLADPGLAELACKALHNLLIEPLPAGGVEEVLGGPETYKRLWWTLKELMGACE 4110
D +C L+ V ++ N EAV+EAARAFGNFSRD R AM R + LV L + A + L +VRRAG+ D LA +ACKALHNLL++ A G L G T+ RL TL EL+ +
Sbjct: 335 DAVCVSLLAVTVHENHEAVSEAARAFGNFSRDEDARRAMRRLGVVEALVLLLGHPARDVVFAATGALVNAAVDGRDVLWEHK----AHEELVAVVRRAGVQDLDLAAVACKALHNLLLDA--ATGTAAELLGAATHGRLLDTLGELVAVAD 479
BLAST of mRNA_P-littoralis_Contig64.45.1 vs. uniprot
Match: A0A662WTQ9_9STRA (Uncharacterized protein n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662WTQ9_9STRA) HSP 1 Score: 73.2 bits (178), Expect = 3.320e-9 Identity = 89/346 (25.72%), Postives = 144/346 (41.62%), Query Frame = 1
Query: 2233 RRVSPLLAQAINLLRDLAVGGKDRSERFCAAGAARTLCSILRPFGNHQDVVLNAARALAKLSLQEKTRGEINSDPGHARDLLAALIEQGRTIDGSFGDLVTTDQSSSXXXXXXXXXXTGAADAAIPVDPVDRRRRWEKQEKCVAACVRIAFALGNLTSGSDENRGLIGILHGGAESLPALLQTSARAHLAAWNCLCGAQTNPFASADWSTEGVGDGAWGGGSRDSFLGECWARNTLRRACDGLEEMLVKTVRLLANISINREVGQLVCRQPGLVALEPLVGKCLELFALFEDGALPQANARVQPGGRCRSRNGGRHGAAGPGEQVTMPGEELLLNTVSLVTNLSFY 3270
+ ++ L Q +LR+L+V K ++F A LC+++ F HQ++++N +R L+KL+L E R +IN + ++L+ LV Q+S + VD++R + + + +R+ F LGNL +G+D NR LI + G L +LQ A + C ++N SA EG +C A T +A E+LVK VR+ AN++IN +VG + + GL L LE+ + + RV EEL+LN VS +TN+S+Y
Sbjct: 318 KEIAQFLIQTTGILRNLSVA-KSYHKQFIEAQVPARLCNVIPAFLEHQELMVNVSRILSKLTLHELPRAQINQQSANVQNLVT---------------LVDHRQNSW-------------------LSLVDQQRSEMRFQDLLF--IRMFFVLGNLCAGNDHNRSLIALDFSGIRLLLEVLQFYAARY-------CDERSN---SASHEQEGX---------XXXXXKDCGA-TTGEQAM----EVLVKLVRVFANLAINADVGAQLNGRDGLAPL-------LEILEVAQ---------RVGD-------------------------EELMLNAVSCITNVSYY 561
BLAST of mRNA_P-littoralis_Contig64.45.1 vs. uniprot
Match: A0A7S1TTF5_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TTF5_9STRA) HSP 1 Score: 72.0 bits (175), Expect = 7.360e-9 Identity = 54/149 (36.24%), Postives = 76/149 (51.01%), Query Frame = 1
Query: 3676 LVKVLLYPNAEAVAEAARAFGNFSRDPSCRAAMARRRADDVLVALXXXXXXXXXXXXXXXXXXXXXXXXXXXXXS-RESVGAGDRLARLVRRAGLADPGLAELACKALHNLLIEPLPAGGVEEVLGGPETYKRLWWTLKELMGACERPE 4119
L+++LL N EAVAEAARAFGNFSR + R ++ RAD+ L+ L S + A +L ++RRAGL D L+ L CK L+NLL++ P G + +LG P+ + + TL+EL CE E
Sbjct: 524 LLEILLCTNVEAVAEAARAFGNFSRYRAFRRSLRACRADEALLLLLQHPDRDVVCNSCGALINIAADEAHRRLFSYTHQLQAPTKLLNILRRAGLRDSPLSSLVCKTLYNLLMDVEP-GRIGAILG-PKVFDSMLNTLEEL---CETAE 667
BLAST of mRNA_P-littoralis_Contig64.45.1 vs. uniprot
Match: A0A662XPN7_9STRA (Uncharacterized protein n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662XPN7_9STRA) HSP 1 Score: 72.0 bits (175), Expect = 7.510e-9 Identity = 88/346 (25.43%), Postives = 144/346 (41.62%), Query Frame = 1
Query: 2233 RRVSPLLAQAINLLRDLAVGGKDRSERFCAAGAARTLCSILRPFGNHQDVVLNAARALAKLSLQEKTRGEINSDPGHARDLLAALIEQGRTIDGSFGDLVTTDQSSSXXXXXXXXXXTGAADAAIPVDPVDRRRRWEKQEKCVAACVRIAFALGNLTSGSDENRGLIGILHGGAESLPALLQTSARAHLAAWNCLCGAQTNPFASADWSTEGVGDGAWGGGSRDSFLGECWARNTLRRACDGLEEMLVKTVRLLANISINREVGQLVCRQPGLVALEPLVGKCLELFALFEDGALPQANARVQPGGRCRSRNGGRHGAAGPGEQVTMPGEELLLNTVSLVTNLSFY 3270
+ V+ L Q +LR+L++ K ++F A LCS++ F HQ++++N +R L+KL+L E R +IN + ++L+A +++ R S+ LV DQ S R++ +R+ F LGNL +G+D NR LI + G L +L+ A + C ++N SA+ E + G + + + E+L+K VR+LAN+SIN +VG + G L PL+ + LE+ D EEL+LN VS +TN+S+Y
Sbjct: 320 KEVAQFLVQTTGILRNLSIS-KSYHKQFVEAQVPARLCSMIPAFLEHQELMVNVSRILSKLTLHELPRAQINQQSANVQNLVA-IVDHRRN---SWLSLV--DQQHS-------------------------EMRFQD-----LLFIRMFFVLGNLCAGNDHNRSLIALDFSGISLLLEVLRFYAARY-------CDERSN---SANHEQERQEEEDRGATTGEQAM-----------------EVLIKLVRVLANLSINADVG---AQLNGREELAPLL-EILEVAQRVGD-------------------------------------EELMLNAVSCITNVSYY 560 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig64.45.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 14
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig64.45.1 >prot_P-littoralis_Contig64.45.1 ID=prot_P-littoralis_Contig64.45.1|Name=mRNA_P-littoralis_Contig64.45.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=1427bp MGLLCQDAPLEESFASGGNIAQVLRQARASLQDPSRPFTPTERRLRSTKSback to top mRNA from alignment at P-littoralis_Contig64:213309..218458- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig64.45.1 ID=mRNA_P-littoralis_Contig64.45.1|Name=mRNA_P-littoralis_Contig64.45.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=5150bp|location=Sequence derived from alignment at P-littoralis_Contig64:213309..218458- (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig64:213309..218458- >mRNA_P-littoralis_Contig64.45.1 ID=mRNA_P-littoralis_Contig64.45.1|Name=mRNA_P-littoralis_Contig64.45.1|organism=Pylaiella littoralis U1_48|type=CDS|length=4281bp|location=Sequence derived from alignment at P-littoralis_Contig64:213309..218458- (Pylaiella littoralis U1_48)back to top |