mRNA_P-littoralis_Contig635.58.2 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig635.58.2
Unique NamemRNA_P-littoralis_Contig635.58.2
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
BLAST of mRNA_P-littoralis_Contig635.58.2 vs. uniprot
Match: D7G0Z2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0Z2_ECTSI)

HSP 1 Score: 121 bits (303), Expect = 2.090e-29
Identity = 65/119 (54.62%), Postives = 82/119 (68.91%), Query Frame = 2
Query:  542 IEHAVHVKVGVGYNFPEHSPTQACVSACLGAYD-NTSPPVEEMVPGGYDFMKLRVQLAVPVPEEEVDVEAIKKVLPYGELLPIEFQHGGMLTPSANI-----EDDTDMITAISCITLGY 880
            ++H + V++G G +    + T+ACV AC  A + N+ P ++ +VPGGY  MKLRVQLAVPV EEEVDVE IKKV PYGELLPIEFQ GGM   S        + + DMI AISC+T+GY
Sbjct:    1 MDHVLFVELGFGNDQHGQNATKACVRACRNAIEFNSIPSIKNIVPGGYAGMKLRVQLAVPVAEEEVDVEEIKKVFPYGELLPIEFQSGGMRASSGIALPEMGDTNDDMIVAISCVTVGY 119          
BLAST of mRNA_P-littoralis_Contig635.58.2 vs. uniprot
Match: W7TCK4_9STRA (Uncharacterized protein n=2 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TCK4_9STRA)

HSP 1 Score: 103 bits (257), Expect = 3.580e-22
Identity = 64/173 (36.99%), Postives = 97/173 (56.07%), Query Frame = 2
Query:  401 VAAILGVTTVGHGFLVSPALHSCKASHQRDTQ--TIAAASRKQ-----LGQQGGIEHAVHVKVGVGYNFPEHSPTQACVSACLGAYD-NTSPPVEEMVPGGYDFMKLRVQLAVPVPEEEVDVEAIKKVLPYGELLPIEFQHGGMLTPS-----ANIEDDTDMITAISCITLGY 880
            + + L +    H F  S  LH+ + SH   T+  TI A+S+       +    G++  + V++G G +      T+A V AC  A + N+ P + ++VPGGYD MK+RVQ+AVPV    +D EAIKK  PYG+LLP+E Q GGM   S     A  + + D I AI+ +++G+
Sbjct:   11 IVSFLAILLCPHAFFRST-LHATRNSHLPVTRSFTIMASSKASTSDVTVSSVEGMQQLLFVQMGFGCDQHGQDATKAAVKACRNAIEWNSLPSINQIVPGGYDAMKVRVQIAVPVDASNIDTEAIKKAFPYGQLLPVEIQSGGMRASSGIALPAMGDRNDDWIVAIAAVSVGW 182          
BLAST of mRNA_P-littoralis_Contig635.58.2 vs. uniprot
Match: A0A4D9D6T6_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D6T6_9STRA)

HSP 1 Score: 95.5 bits (236), Expect = 8.560e-20
Identity = 52/132 (39.39%), Postives = 79/132 (59.85%), Query Frame = 2
Query:  503 AAASRKQLGQQGGIEHAVHVKVGVGYNFPEHSPTQACVSACLGAYD-NTSPPVEEMVPGGYDFMKLRVQLAVPVPEEEVDVEAIKKVLPYGELLPIEFQHGGMLTPS-----ANIEDDTDMITAISCITLGY 880
            A+ S   +    G++  + V++G G +      T+A V AC  A + N+ P + ++VPGGY+ MK+RVQ+AVPV    +D EAIKK  PYG+LLP+E Q GGM   S     A  + + D I AI+ +++G+
Sbjct:    6 ASTSDVTVSSVEGMQQLLFVQMGFGCDQHGQDATKAAVKACRNAIEWNSLPSINQIVPGGYEAMKVRVQIAVPVDATNIDTEAIKKAFPYGQLLPVEIQSGGMRASSGIALPAMGDRNDDWIVAIAAVSVGW 137          
BLAST of mRNA_P-littoralis_Contig635.58.2 vs. uniprot
Match: A0A7S0JJU0_9EUKA (Hypothetical protein n=1 Tax=Calcidiscus leptoporus TaxID=127549 RepID=A0A7S0JJU0_9EUKA)

HSP 1 Score: 80.1 bits (196), Expect = 1.630e-14
Identity = 43/109 (39.45%), Postives = 68/109 (62.39%), Query Frame = 2
Query:  596 SPTQACVSACLGAYD-NTSPPVEEMVPGGYDFMKLRVQLAVPVPE-EEVDVEAIKKVLPYGELLPIEFQHGGMLTPS-----ANIEDDTDMITAISCITLGYGFHVSPD 901
            +P++ACV AC  A + N+ P + ++VPGGY+ MKL VQ+ VP      VDVE + +V PYG ++ ++ + GG+L  S     A  + ++DMI A++C+T+GY      D
Sbjct:    4 NPSKACVRACRSAIEFNSLPSMRQLVPGGYEAMKLHVQIGVPSAYVSHVDVEQVSRVFPYGNVV-VDVEPGGLLADSGVALEAMGDKNSDMIIAVACVTVGYDRRTETD 111          
BLAST of mRNA_P-littoralis_Contig635.58.2 vs. uniprot
Match: A0A7S0IE99_MICPS (Hypothetical protein n=4 Tax=Micromonas TaxID=38832 RepID=A0A7S0IE99_MICPS)

HSP 1 Score: 80.5 bits (197), Expect = 4.700e-14
Identity = 48/133 (36.09%), Postives = 77/133 (57.89%), Query Frame = 2
Query:  503 AAASRKQLGQQGGIEHAVHVKVGVGYNFPEHSPTQACVSACLGAYD-NTSPPVEEMVPGGYDFMKLRVQLAVPVPEEEVDVEAIKKVLPYGELL-PIEFQHGGMLTPSA----NIEDDTD-MITAISCITLGY 880
            A  SR    +  G+ H + V++G+G +      T+A V AC  A + N+ P + ++VPGGYD MKL +Q+ VP     +D+E I++V PYG++  PIE   GG++  S      + D +D  + A++ IT+GY
Sbjct:   45 AVVSRPPPTEGMGMNHVLFVEIGMGADQHGQDATKAAVRACRNAIEFNSIPSIRQIVPGGYDNMKLHIQIGVPK-GAVLDLEKIRRVFPYGQICEPIEVVEGGLMARSGIKIPEMGDKSDEFVIAVAAITIGY 176          
BLAST of mRNA_P-littoralis_Contig635.58.2 vs. uniprot
Match: A0A7S2KJ50_BIGNA (Hypothetical protein (Fragment) n=1 Tax=Bigelowiella natans TaxID=227086 RepID=A0A7S2KJ50_BIGNA)

HSP 1 Score: 76.6 bits (187), Expect = 2.260e-12
Identity = 40/94 (42.55%), Postives = 59/94 (62.77%), Query Frame = 2
Query:  542 IEHAVHVKVGVGYNFPEHSPTQACVSACLGAYD-NTSPPVEEMVPGGYDFMKLRVQLAVPVPEEEVDVEAIKKVLPYGELLPIEFQHGGMLTPS 820
             E  + V+ G G +    + T+A V AC  A + N+ P + +++PGG D MKL+VQL VPV  +EVD+E + KV PYG+L PI  + GG++  S
Sbjct:  104 FEEVLFVECGFGCDQHGQNATKAAVRACRNAIEFNSLPGIRKVIPGGKDNMKLQVQLGVPVDADEVDLEQVAKVFPYGKLQPIIVEKGGLIGKS 197          
BLAST of mRNA_P-littoralis_Contig635.58.2 vs. uniprot
Match: R1FT88_EMIHU (Uncharacterized protein n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=R1FT88_EMIHU)

HSP 1 Score: 74.7 bits (182), Expect = 2.810e-11
Identity = 50/153 (32.68%), Postives = 78/153 (50.98%), Query Frame = 2
Query:  440 FLVSPALHSCKASHQRDTQTIAAASRKQLGQQGGIEHAVHVKVGVGYNFPEHSPTQACVSACLGAYDNTSPPVEEMVPGGYDFMKLRVQLAVPVPEEEVDVEAIKKVLPYGELLPIEFQHGGMLTPS-----ANIEDDTDMITAISCITLGYG 883
            F  S A+     +  R    +A A+ K      G+ H   V++G G     +  T+A V AC  A +  S  V  ++PG Y+ M+L VQLAVP PE  VD++A+    PYG L+ ++ + GG+   S     A    +  M  A++C+T+G+G
Sbjct:   10 FSTSSAVVLRAVAPHRSRPPVAQATSK------GLTHVALVELGSGCCHGGNG-TKAAVRACNSAIEWNSVKVRTIIPGSYEAMRLHVQLAVPEPEA-VDLDAVAACFPYGTLVRVDVEQGGLRASSRAGLLAEEPAEAHMTVAVACVTVGWG 154          
BLAST of mRNA_P-littoralis_Contig635.58.2 vs. uniprot
Match: A0A6U2AUB5_HEMAN (Hypothetical protein n=1 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A6U2AUB5_HEMAN)

HSP 1 Score: 74.3 bits (181), Expect = 3.940e-11
Identity = 77/250 (30.80%), Postives = 115/250 (46.00%), Query Frame = 2
Query:  539 GIEHAVHVKVGVGYNFPEHSPTQACVSACLGAYD-NTSPPVEEMVPGGYDFMKLRVQLAVPVP-EEEVDVEAIKKVLPYGELLPIEFQHGGM------LTPSANIEDDTDMITAISCITLGYGFHVSPDIRSIRARRAGGGXXTGAR-----SGKGGMKQAVHMMFGFGHDHGESTQNPTEACIRACIDAV--ESPP--KEMAEGGIEGMKLRVQLAVPASEE-EVDVEAIKKLFPYDELMP-IEFQRGG 1231
            G++  +  + G G +      T+A V A   A + N+ P +  +VPGGYD M LRV LAVP      +D+EA+KKV PYG    +  + GG+      L   A++ DD  ++ A   + +  G   SP        +AG       R     +   GM QA+ +  GFG D   +  N    C+RA  +A+   S P  + +  GG+  +   + +AVP S    VD E +  LF    L P +  Q GG
Sbjct:    5 GMKSVLFTETGFGADQHGQDVTKAAVRAARNAIEFNSIPSIRRLVPGGYDNMALRVTLAVPPQYRANLDIEAVKKVFPYGVKTVVVQEGGGVFSSGIALRAMADVNDDMLVVCAHVAVGVSDG---SPPGGEEAMPQAGAAPGEVMREEFSVTEMEGMTQAMFIQAGFGADMPINDVNT--CCMRAVQNAMTFNSHPCLETVIPGGMPNVATHISIAVPKSMVGSVDRERVASLFK--GLTPTVSVQEGG 247          
BLAST of mRNA_P-littoralis_Contig635.58.2 vs. uniprot
Match: A0A7S0EY88_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Phaeocystis antarctica TaxID=33657 RepID=A0A7S0EY88_9EUKA)

HSP 1 Score: 68.6 bits (166), Expect = 1.140e-10
Identity = 33/73 (45.21%), Postives = 48/73 (65.75%), Query Frame = 2
Query:  602 TQACVSACLGAYDNTSPPVEEMVPGGYDFMKLRVQLAVPVPEEEVDVEAIKKVLPYGELLPIEFQHGGMLTPS 820
            T+A + AC  A +  S  V  ++PGGYD ++L VQ+AVP PE  VD++A+ +  PYG+LLP+    GG+L  S
Sbjct:   17 TKAAIRACNDAIEWNSVKVTTIIPGGYDALRLHVQIAVPAPET-VDLDAVARCFPYGQLLPVAVAEGGLLGSS 88          
BLAST of mRNA_P-littoralis_Contig635.58.2 vs. uniprot
Match: A0A6V8M8B9_9BACL (Uncharacterized protein n=2 Tax=Paenibacillus TaxID=44249 RepID=A0A6V8M8B9_9BACL)

HSP 1 Score: 68.9 bits (167), Expect = 1.300e-10
Identity = 41/114 (35.96%), Postives = 71/114 (62.28%), Query Frame = 2
Query:  560 VKVGVGYNFPEHSPTQACVSACLGA-YDNTSPPVEEMVPGG-YDFMKLRVQLAVPVPEEEVDVEAIKKVLPYGELLPIEFQHGGMLTPSANI----EDDTDMITAISC-ITLGY 880
            +++G+G +    + T+A + A   A + N+ P +  ++P G  D MK+RV+LAVP   +++D+EA+KKVLPYG++  +E   GGMLT S  +    +D  D+I  ++  + +GY
Sbjct:    7 IEIGMGADLHGQNVTKAAIRAVQNAIHHNSMPGLRSVLPDGTLDNMKVRVRLAVPCDRDKLDIEAVKKVLPYGQVT-VEVIDGGMLTTSGVVLPDKDDKNDLIYIVNAAVEVGY 119          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig635.58.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G0Z2_ECTSI2.090e-2954.62Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
W7TCK4_9STRA3.580e-2236.99Uncharacterized protein n=2 Tax=Nannochloropsis ga... [more]
A0A4D9D6T6_9STRA8.560e-2039.39Uncharacterized protein n=1 Tax=Nannochloropsis sa... [more]
A0A7S0JJU0_9EUKA1.630e-1439.45Hypothetical protein n=1 Tax=Calcidiscus leptoporu... [more]
A0A7S0IE99_MICPS4.700e-1436.09Hypothetical protein n=4 Tax=Micromonas TaxID=3883... [more]
A0A7S2KJ50_BIGNA2.260e-1242.55Hypothetical protein (Fragment) n=1 Tax=Bigelowiel... [more]
R1FT88_EMIHU2.810e-1132.68Uncharacterized protein n=1 Tax=Emiliania huxleyi ... [more]
A0A6U2AUB5_HEMAN3.940e-1130.80Hypothetical protein n=1 Tax=Hemiselmis andersenii... [more]
A0A7S0EY88_9EUKA1.140e-1045.21Hypothetical protein (Fragment) n=1 Tax=Phaeocysti... [more]
A0A6V8M8B9_9BACL1.300e-1035.96Uncharacterized protein n=2 Tax=Paenibacillus TaxI... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig635contigP-littoralis_Contig635:104503..111778 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog2880.D7G0Z2
PFAMsLin0512_fam
Model size1445
Max annot lvl2759|Eukaryota
Hectar predicted targeting categoryother localisation
Exons8
Evalue2.86e-30
EggNOG OGs2AJ2R@1|root,2RZVV@2759|Eukaryota
Ec32 ortholog descriptionTubulin/FtsZ, 2-layer sandwich domain
Ec32 orthologEc-23_003930.1
DescriptionConserved hypothetical protein (Lin0512_fam)
Cds size1398
COG categoryS
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig635.58.2prot_P-littoralis_Contig635.58.2Pylaiella littoralis U1_48polypeptideP-littoralis_Contig635 104549..111778 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791324.762039-UTR-P-littoralis_Contig635:104502..1045481680791324.762039-UTR-P-littoralis_Contig635:104502..104548Pylaiella littoralis U1_48UTRP-littoralis_Contig635 104503..104548 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791324.7756858-CDS-P-littoralis_Contig635:104548..1050371680791324.7756858-CDS-P-littoralis_Contig635:104548..105037Pylaiella littoralis U1_48CDSP-littoralis_Contig635 104549..105037 +
1680791324.7912269-CDS-P-littoralis_Contig635:106329..1064121680791324.7912269-CDS-P-littoralis_Contig635:106329..106412Pylaiella littoralis U1_48CDSP-littoralis_Contig635 106330..106412 +
1680791324.8121488-CDS-P-littoralis_Contig635:106790..1068991680791324.8121488-CDS-P-littoralis_Contig635:106790..106899Pylaiella littoralis U1_48CDSP-littoralis_Contig635 106791..106899 +
1680791324.8229961-CDS-P-littoralis_Contig635:107419..1075251680791324.8229961-CDS-P-littoralis_Contig635:107419..107525Pylaiella littoralis U1_48CDSP-littoralis_Contig635 107420..107525 +
1680791324.8357701-CDS-P-littoralis_Contig635:108107..1082381680791324.8357701-CDS-P-littoralis_Contig635:108107..108238Pylaiella littoralis U1_48CDSP-littoralis_Contig635 108108..108238 +
1680791324.849244-CDS-P-littoralis_Contig635:109413..1095021680791324.849244-CDS-P-littoralis_Contig635:109413..109502Pylaiella littoralis U1_48CDSP-littoralis_Contig635 109414..109502 +
1680791324.859359-CDS-P-littoralis_Contig635:110355..1104551680791324.859359-CDS-P-littoralis_Contig635:110355..110455Pylaiella littoralis U1_48CDSP-littoralis_Contig635 110356..110455 +
1680791324.87048-CDS-P-littoralis_Contig635:111487..1117781680791324.87048-CDS-P-littoralis_Contig635:111487..111778Pylaiella littoralis U1_48CDSP-littoralis_Contig635 111488..111778 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig635.58.2

>prot_P-littoralis_Contig635.58.2 ID=prot_P-littoralis_Contig635.58.2|Name=mRNA_P-littoralis_Contig635.58.2|organism=Pylaiella littoralis U1_48|type=polypeptide|length=466bp
MRELRGSWKSAWKYVPSRIQVFALRKVVQSPLLSSDTAVVVVGAARSSIK
NEKLEKRLRRGCEPEFVKASVGIRQCLETLVLLSVPLIALASSQLAVPVP
RLERPSPSMHRHRLALPLVAAILGVTTVGHGFLVSPALHSCKASHQRDTQ
TIAAASRKQLGQQGGIEHAVHVKVGVGYNFPEHSPTQACVSACLGAYDNT
SPPVEEMVPGGYDFMKLRVQLAVPVPEEEVDVEAIKKVLPYGELLPIEFQ
HGGMLTPSANIEDDTDMITAISCITLGYGFHVSPDIRSIRARRAGGGGGT
GARSGKGGMKQAVHMMFGFGHDHGESTQNPTEACIRACIDAVESPPKEMA
EGGIEGMKLRVQLAVPASEEEVDVEAIKKLFPYDELMPIEFQRGGMRASS
AKLGGEALCESKFAVVRISSVFTYFRRWSRGRPPPLPLGKNRRDFFRTRK
GRRLQAKGLMTTSIDV
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mRNA from alignment at P-littoralis_Contig635:104503..111778+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig635.58.2 ID=mRNA_P-littoralis_Contig635.58.2|Name=mRNA_P-littoralis_Contig635.58.2|organism=Pylaiella littoralis U1_48|type=mRNA|length=7276bp|location=Sequence derived from alignment at P-littoralis_Contig635:104503..111778+ (Pylaiella littoralis U1_48)
CGATGACATAGTCTACAGACATAGACTAGTCTAACTTTGTCAGCGCATGC GAGAGTTGCGAGGGTCTTGGAAGTCGGCGTGGAAATATGTCCCCAGTCGG ATACAAGTATTTGCACTACGAAAAGTAGTACAGTCTCCACTGCTGTCCTC TGATACTGCTGTTGTTGTAGTCGGTGCTGCAAGATCTTCAATAAAAAATG AAAAACTGGAAAAACGGTTGAGGCGGGGATGCGAGCCTGAGTTTGTCAAA GCCTCCGTTGGAATACGGCAGTGTTTGGAAACCCTCGTCCTGCTCTCGGT GCCGCTGATCGCTCTGGCTTCCTCACAGCTCGCTGTCCCAGTGCCCCGTC TCGAGCGTCCATCGCCGAGCATGCATCGGCATCGGCTGGCACTGCCGCTG GTTGCTGCTATCCTGGGCGTGACCACAGTCGGGCATGGTTTCCTTGTGTC ACCTGCGCTTCATTCCTGTAAAGCAAGTCACCAGCGAGATACGCAAACGA TAGCAGCCGCTTCTCGAAAACAGCTGGGACAACAGGTGCGTTCAACAGCA AGGTGTGTCTACTGCTGTACAAGAGGAATACCTAGCTGTGCTCGGGGCAC TTGCCACTGAAGGGTGCAAGCAGTACGAAAGGGGCAGGCAGAGATTGCAG GTGTTCAGGTATCAACGAGGTTCACTGTGCGTGTGGTGCCTACAGCCCCA TCTGCCTCTGAGGTTTTCAAAAGTGTAAAGAGGGAAACATGAGCCTTTTG ATTCTAAAAAACACTGCTGGTAAAACAGCAGTTGCCCTGCCCTCTGATGT CAAACAACAGCTTAGATTCGCGAACCGGGAGTCGGAAATCGCTCGTTTGA ACGGACCTACCCTCGAGCTAGATTTACATTCTGCCTGAAGGGTTGCAGTG TCCATCCTTTGTGTGAGGTGATATGATATATTATGCATTCATGAGCCGTC TTTTTCATTTTTCACTGATCAGTTGGTTATCCACGCAACCTTCTGACAGT CATGGGTGAGTTCGAATCCCAGTGCAGTAATACGATCTGGGGTTTTTTCT CACATTGCGCGTGAAAGTGGAAAGCGATCAATTCGTGAGTAAACAAAATT CGATCGTACCATCGACGAGGGAACGGGATTGCTGTCCCCTTTCTCGCGAT GAAAGCTCAACCACAAGGCAAGCACCGCAGAGGGAAGTGGAGAAAAAAAA AAAACCTGTGTTGACTTCCCCCTGTGACCCCGGTTGGAGCGTCTACCAAC CCGAAAGGTGTAGAGTGGCGTCCAATTAAAGGGATGACAACACACACACA CTGATCAGTGAAAAGGCTTTTTTCACTACGTATTCACCACCGAATTGTGC ATGTGACGGTGTGTACCACACCCCTTGGAACGATTTGCCCAGAGCTCGAT TAAACTCGATGATATAGCGGTACAGCAGTCTCCAACGAAGCATGCTACCA AACGATGCAAACGGTCCCGACAAATTGTCGACGAAGTGGCTCCAACGCCG CCCGTTTTGGTGCCGGCACTCATCCTTTTGGTGAAGATGTCGAGCTACGA GAATCGGCCCATGTGGTAGTACTTCAGTAAGTCGGATATGATGCGGTGTG TAGGGAGAGCGACCGGTGTTCGTGCGTGCCACACAGCAGTCTGCTTCGTT CAGGAAATCGGAAGTGACCGCGAGACATGCACGCAACCATACCGACGAGT TTTGTAACGGCTTTGTCGTGCTCACTTTTTTCGCAGTGTGGGACGATTTT TCATCCGCTTCGCCACGGGACACTTTACTCTTGTTGCTGCTGCTCGCATG ATGCAACATGACATGAAATGATGATAGGGCGGTATCGAACACGCGGTCCA CGTCAAGGTTGGCGTCGGCTACAACTTCCCCGAGCACAGCCCCACCCAAG CCTGCGTCAGGTAAGTCATTCCTCTGTGCTCTCGGAAGATGATTTCCTGG GAGCCGCTGCTGTACACCGCTGTCTAGACGTTTTGCCATTGTCTACGTAT CGGTGTTTTGCTCCTCTTCCGCCCTCAAGATGTTATTTCCTTTGCACACA CCCCCCTTCAATTCTTGCTCTGTCTCTCGCATACTCCGGCAGCTGTCATA TTTTCGTCTGTGCAACCCCTGCGTGGAAGTCGGAGCCATGTAGAACGACC CCGCTTGCCCGCTCCCGGAATACACGATTCTAACTGAACAAAGAGTAAAA CTGCAGACCGCGTGTCAGAGGCACGAACGACATCATACCTCAAGCCGATG AAACTGCTTCCTGTGACACTTCTGTCTGTTTCCCGCAGTGCCTGTCTCGG CGCATACGACAACACTTCTCCGCCCGTCGAGGAAATGGTTCCCGGGGGTT ACGACTTCATGAAGCTCCGAGTGCAACTGGCCGTCCCCGTGCCGGAGGTG ATCAAACTCTATTGATCTAATTGGTTATAAAAAAAATCGAAAATGTTGTG GACCACATGATATGTTTTGGGTGCTGACAGTTTTCACGATGTCTTGGTCG CATATTTTGCGTGTGAAGAGTTTTGCAAAAACAAATATCGACCTTGAGGC AGCCACAACAGCAGTCGGGCTTGGAATCTGGACTTCCCCATTTCATTTCT CGCTGCACCACTGCCACAATACCCCGTAATCACTTAACTGTATCCATAAC ACGCAAGGCTGGCGGGGTTATTTTTTATATAGAACAAATTTTGTTGTTGG CAAATAGGTTTCGAAAAAAAGTTTTAAACCTTCTTGCGGCGTGACTAACG ACATCCGCGTTTTGTTAATTGTATAAGACATTTGTTAACGGAACATCTTG GGGCAAGTTCCTTGTGCTCAAGTTCTGAAACCCTGACAGCAGTATCTGGG GCCTCCCTGGAATGCCCGACTCCTAACTATGACAGTATTGCGTGTTGTGC CCGGCGCGTCTGTGCAGGAAGAGGTGGATGTTGAGGCAATTAAAAAAGTG CTCCCATACGGCGAGCTGTTACCAATAGAGTTTCAACATGGCGGAATGCT CACGCCTAGCGCAAATATAGAAGGTGAGGCGTGTGAAAATTTGCTACCAA AAATGAGGCGCATTTATTTTTCGCGAGGTGACGTACGTACGGCAGCCAGC AACGCATCCCGGCCCCCGCTGGTCTGTCAAATCCGCACTTGATGGAAGGC CGCAATAACCGAACTGAAGGTTCACGGAAAAGCTCTCTGGTGGAGATATC TGCAACACCACCGGTGTATACGGACATTGCCATCTCATGTTACGTGGGGG TTTTATCGTCGACTCCAACGAAAACAAATCACTGCTGTCATGATAGACGT TTGAAGTATTGACCTTATCGCCGCGACCAACCCATATGCATATCAGCAGT TTTCATGTTTCGTGTGCGATGCACGTCTTTGCTCGCTGCTTAAGAATCTT GGGTCCAAAGTTTCTCTCTGTAGGTTCATGAGAAGAATAAACAAGGCATC GTTCTCGTCAGTCAATGCGCAGACAATACCACGTATGTACCAGGTACCAG GTATATGTTTACCTCGTTTTTTCTGTCCTGCCCCGCGCCCCCCCCTTTTT TTTATCTCCTCGCTTTCCTGTGCCGTCAACACGCTCTGCTCACTCGAAAC AACAGATGATACTGACATGATTACGGCCATAAGCTGCATCACGCTGGGCT ATGGCTTCCACGTGTCACCCGATATACGTTCCATCCGAGCCCGTCGCGCG GGAGGGGGCGGGGGAACGGGAGCGCGATCTGGGAAGGTACAAGTTGCACT TGTAGGTGTGCTATGATATGGTAGGAATGTTCCCCTCCCCGCATGCGCAG GCAACAGTAGGACCTCACTTCCAGCAGTCAGCAACTTGCAGGCAGAGAGT AACCACGAGGCGGCACGTTCGTACTACGCGTGTCAAATGTAACCCCTCCT CCCACGTTCATTTGTACAAGTAGGGAAACACAAACGTTGAGAGAAAGCAG TAGCTGCTGCTGCTGCTGCTGCTGCTGCTGCCTGTCTCAATAAGTACGAC AAACAATGGGTTGAGGCGCGCGCTTTCTGCGGGAGTTGAGACGGAATCTC TCCTTGTGGTGGACATGCACGATCGGACGTGAGGACAACCCTTGTACTCG TGAGGCCTAGATAAAGGCAGCCTGCCGGAAGCGCTGCAGCGCGTCCCGTG CGTGCGTACGGCACAGTGAGCCGTTCACTTATACTTCGTACACCAGAAGC GTGTCCGAAATTACGGTGGCCGGTGTGTATGCCCGAGAATAAGTGGCCGG TTTCGCAATTGCGTCTATACTATTGCAACAATGTCAGTAACCACCGGATG TAGTTGAAGGATGAAAAATAATAGATGAACTGGATGGGAGACCCCGGGGA TAGTTTCAAACGTCCCCCCGGGGATAGTGGGGTTCGCCCAGAGCAGTCCG GGTCGATTTTACGGTAATTTTGCCTCCACCGCCCTGAGCATAATTTACGA CATTTTTCAGTTCAATTTCTTGGCCGTGGTTGACCTTCCACGGGGAGAAA ATACGAAATGGGCCCGAACAAAGAAAAAAAACGTTGAAAAAGATGAAAAA CCGAAAACAAAAGGGTTGAAAAAAAACGAAGAAGACAGACGAAAGAACAC CGCGTTGCTGGGACTCGAACCCGCGATAAAAAATTATCCAGAGCGGCACT GCTTCGCACAAACAGTAATGAACCATTTGGTCTGTGTACCGGCCTCTACA CGTCCGGACGGACAGGGTGGTTACCGGATGTGCTGTCCGCGTGATGATTT CCTCGTCGTGTTGTAAATATTTCAGCTACTCGGCTACCACGGCTACTGCC TGGTAACCACTGACACTGGTCGGTGCCGTGTTTTTCTTGCTGTTTTTTGC TGATCATGCTAACTCTTGCTGCTCTTGTTGCTCTTGCTGCTCTGGCTAAC CCTTGCGATAGGGCGGTATGAAGCAAGCTGTCCATATGATGTTCGGGTTC GGCCACGACCATGGCGAAAGCACGCAAAATCCCACGGAAGCTTGTATCAG GTGTGCTTCTTCTTCCTGAACAGAGTTTTTACGCGACGGTTATCAAGTGC CCAGAAGCCGTGAATCCGAGCCTTGATTTTTTCGGGGCTTCGTGCGGAAA GTGATCCCACCGTTTAGTTTATGGCCTCGCGTGGGAAAGGATTGGACGGG TTTATCATTTTGGGATGGTTCGGAATTTGGCGGGCGGAACGTGAAACAAT CGTGAGTTCTGTGCTACCCACGACCACCCGTCCCATTGAGTCATGTTTTC GACCACCACTCGCCCCCCGTCAAATGGAAGGGGTATGATACGATACTCCC GACTGCTTCACAACTGTTGCCCCCCCCCAGAAAACTAAAAACCATTCCAC TTGACAAGTGGCCGTCACGGAGACGTCCCCCCCTGATGGGTTGTTGTTGA AGGAATCTTGAGTGTTTTCATACTTCAATATTGAAAATATTTTTCATGTT TCCGGACAAATTCGACACCGATGAACCCATTTTTGGTAAACGACATTTTG CGTGCGAGATGAAGACACGTCGATTATAAAATTGTGGAACCGGCCAGGAC ACCCACTACCTCCAGGACGATCGGTTGGTGGCTGGGTGATGTATCTCCTC GAAGAATCGAAGCCATGATACGTATCCCGCCGACATCGTCCCGTCCGATG ATTTCTATCTTCACAGCAGTATTTTATTCGGGCCTGCTCGGAACCTTTCC GCTTTTGCCTTTCCCTCTGCAAATCATCAcccccCCCCCCCCTAAAAAAA AAAGAGCATTCCAAAGCACAGGAGGTCTGAAACGATTGAAATGCTAACTA CGATATTTGTCTCAGCTGACACATGCGGTGACGTTTTGTTTGTTATCTCG CAGGGCATGTATTGACGCGGTCGAGTCTCCCCCCAAGGAGATGGCCGAAG GGGGGATCGAAGGCATGAAGCTTCGAGTACAGCTGGCTGTCCCAGCGTCG GAGGTGATTGCAATCCTCTTGATATAGTTGGTCGAAAGATCGAAAAGTTG TGCATACAAATATCGGCGAGTTGTATTGGTGGCAGGCGTTCGATGTCGCG CACCCATTCGCCCGTCTTGTCACGGCGGTATGGGTAGAATATTATGGTCC AGAACATCACGTACGTGGGGCTCCTTGACGGACGAAGCTGTCCATCCTTG ACTAGCCACGTACTTGTTTTGAAGTTCGTGCGTGGTACGCCTGCTACGGC ATAGTCCGTGGGGCTCATTTGTTATCGTGTCGCGCCTTCCGTTGTAATTA TCAGCGTCGGTTTTAGGCCGAGATATCGAGTTCCTCGCTTTTCGGAAACC ACCGTTCGGGTGTCTCATGCGCAACGTAATGTAGACTTCTTCGTTGCACC GCCGCGGTTGGTTGTGTGCTTGCAATCGGCGACGAAAAACTTTGCTGCGG TGAACGAACGGTATTATAGCGACCGCACGGCTGTGACACTCTTGGCTACT CGCTGATGCTACCGTACTCCTCCCCCGCGCAAACCAAAACGCAACTGCTG TGTGCTTCTCTTTTGCGCTACAGCACGCGACACATGCTAAGAAACTCCTT GGTTGGCTTTGTAAGATTCGCGGCTTATTTCTTCCGCGGGCGTCACCCAA TAGCCACTTTGTAGGTTTAAGTGTAGTATACTATCATAGACTGAGCGCAA ATGCTTACCTGTAAATGCGTAATTTCCAAAAAAAATGAGGCTGGATTTAC TATCTATGAGTTTCTTAACATGTGCCACGTACCAAAAAAAAAGGCTCGCC TTCGTGATACTGTTCCACTGACTAATAAACACCGACAAATTTGAGACAGG AAGGCTGTTGCTGCGTCGACTAGTGTGGCGCTTCTTAAATGCACAGAGCG CTTTGTCTCCGTCTCCGTCGCGCTCATTCTCGTGAAGCTCGGACGAACTC GGGCGTCACTCGTACTCTGTACTCACTTGCCGTTTTGTGTCCGGGTGTGT GTGTGATGTCATGTCTTCTCGGCCCCCACCCGCAGGAGGAGGTGGACGTC GAGGCGATAAAAAAATTGTTCCCGTACGACGAGCTGATGCCAATAGAATT CCAGCGCGGCGGCATGCGCGCGTCCAGCGCGAAGTTAGGAGGTGAGGCGT TATGTGAAAGTAAGTTTGCTGTGGTGAGGATATCATCGGTGTTTACTTAC TTCCGTAGATGGAGTCGTGGACGCCCCCCGCCCCTCCCTCTGGGGAAAAA TCGACGCGACTTCTTCCGCACAAGGAAAGGACGCAGACTCCAAGCGAAAG GTTTAATGACAACATCTATTGACGTG
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Coding sequence (CDS) from alignment at P-littoralis_Contig635:104503..111778+

>mRNA_P-littoralis_Contig635.58.2 ID=mRNA_P-littoralis_Contig635.58.2|Name=mRNA_P-littoralis_Contig635.58.2|organism=Pylaiella littoralis U1_48|type=CDS|length=1398bp|location=Sequence derived from alignment at P-littoralis_Contig635:104503..111778+ (Pylaiella littoralis U1_48)
ATGCGAGAGTTGCGAGGGTCTTGGAAGTCGGCGTGGAAATATGTCCCCAG
TCGGATACAAGTATTTGCACTACGAAAAGTAGTACAGTCTCCACTGCTGT
CCTCTGATACTGCTGTTGTTGTAGTCGGTGCTGCAAGATCTTCAATAAAA
AATGAAAAACTGGAAAAACGGTTGAGGCGGGGATGCGAGCCTGAGTTTGT
CAAAGCCTCCGTTGGAATACGGCAGTGTTTGGAAACCCTCGTCCTGCTCT
CGGTGCCGCTGATCGCTCTGGCTTCCTCACAGCTCGCTGTCCCAGTGCCC
CGTCTCGAGCGTCCATCGCCGAGCATGCATCGGCATCGGCTGGCACTGCC
GCTGGTTGCTGCTATCCTGGGCGTGACCACAGTCGGGCATGGTTTCCTTG
TGTCACCTGCGCTTCATTCCTGTAAAGCAAGTCACCAGCGAGATACGCAA
ACGATAGCAGCCGCTTCTCGAAAACAGCTGGGACAACAGGGCGGTATCGA
ACACGCGGTCCACGTCAAGGTTGGCGTCGGCTACAACTTCCCCGAGCACA
GCCCCACCCAAGCCTGCGTCAGTGCCTGTCTCGGCGCATACGACAACACT
TCTCCGCCCGTCGAGGAAATGGTTCCCGGGGGTTACGACTTCATGAAGCT
CCGAGTGCAACTGGCCGTCCCCGTGCCGGAGGAAGAGGTGGATGTTGAGG
CAATTAAAAAAGTGCTCCCATACGGCGAGCTGTTACCAATAGAGTTTCAA
CATGGCGGAATGCTCACGCCTAGCGCAAATATAGAAGATGATACTGACAT
GATTACGGCCATAAGCTGCATCACGCTGGGCTATGGCTTCCACGTGTCAC
CCGATATACGTTCCATCCGAGCCCGTCGCGCGGGAGGGGGCGGGGGAACG
GGAGCGCGATCTGGGAAGGGCGGTATGAAGCAAGCTGTCCATATGATGTT
CGGGTTCGGCCACGACCATGGCGAAAGCACGCAAAATCCCACGGAAGCTT
GTATCAGGGCATGTATTGACGCGGTCGAGTCTCCCCCCAAGGAGATGGCC
GAAGGGGGGATCGAAGGCATGAAGCTTCGAGTACAGCTGGCTGTCCCAGC
GTCGGAGGAGGAGGTGGACGTCGAGGCGATAAAAAAATTGTTCCCGTACG
ACGAGCTGATGCCAATAGAATTCCAGCGCGGCGGCATGCGCGCGTCCAGC
GCGAAGTTAGGAGGTGAGGCGTTATGTGAAAGTAAGTTTGCTGTGGTGAG
GATATCATCGGTGTTTACTTACTTCCGTAGATGGAGTCGTGGACGCCCCC
CGCCCCTCCCTCTGGGGAAAAATCGACGCGACTTCTTCCGCACAAGGAAA
GGACGCAGACTCCAAGCGAAAGGTTTAATGACAACATCTATTGACGTG
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