mRNA_P-littoralis_Contig634.26.1 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig634.26.1
Unique NamemRNA_P-littoralis_Contig634.26.1
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
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BLAST of mRNA_P-littoralis_Contig634.26.1 vs. uniprot
Match: D7FT86_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FT86_ECTSI)

HSP 1 Score: 534 bits (1375), Expect = 4.150e-186
Identity = 287/409 (70.17%), Postives = 321/409 (78.48%), Query Frame = 2 
Query:  110 MLIARALLAKIRPPRLNPREMQEQVDITRAAVLTSAYALARQXXXXXXXXXXXXXXXXYSYDMLEKEIEAMKPSARKRRTQIALNEQVVNYFALVHAAQNATPPPGLLDTSGGSGGASPVEGLSCPGTEQEGTTPTSATXXXXXXXXXXXXXLGAGTVVEREAERTAERKAVEAWRRKLLKEMLRSELGFNTLVKDSSLPGGGAGLGLFVEGSAAEGAVVAIYPGVVHLPEHLRSQKYAAALLPDEEHFLMGRADGCLVDGRTAGLLPSSPLTFAHAANHPPKGEAANVLQVAYDYPALSDGDVGIAKGGRFPERLRPLVPNRYHRPPKAVFGGKLDQSAMVETVVLVACRGGLHNQEVFMDYRFNPNMPHPDWYSPVDPTATDKMWAVGRGDGAARTILDYSWFRRRS 1336
            MLIARA+LAKIRPP LNPRE+Q QVDI+RAA LT+AYA  +Q                 S+D LEKEI A+ P  RKRR Q A+N+QVV YF LVHAA  ATPPP  LD +GG+  A        PG +QE  +P+S               L    V E++ E+ AE KAV+ WRRK LKEMLRSELGFNT+VKDS+L G  AGLGLFVEGSA EGAVVAIYPG+VHLPEHLRSQKYAA+LLPDE+HFLMGRADGCLVDGRTAGLLPSSPLTFAHAANHPP+G+AANVLQVAYD+PALS+ DVGIAKGGRFPERLRPLVPNRYHR PKA+FGGKLDQSAMVETVVLVACRGGLH+QEVFMDYRFNPNM HPDWYSPVDP AT +MWAV + D  A+T+L+ SWFRRRS
Sbjct:    1 MLIARAMLAKIRPPPLNPREIQNQVDISRAAGLTAAYAAQQQQDKESSC----------SFDQLEKEIAALNPLERKRRAQTAINDQVVTYFTLVHAAHTATPPP-TLDINGGNSVA--------PGKDQE--SPSSEGSATDTPSALRGTSLSG--VEEKKTEKAAEGKAVKRWRRKHLKEMLRSELGFNTVVKDSTLSG--AGLGLFVEGSAPEGAVVAIYPGLVHLPEHLRSQKYAASLLPDEDHFLMGRADGCLVDGRTAGLLPSSPLTFAHAANHPPEGQAANVLQVAYDFPALSEDDVGIAKGGRFPERLRPLVPNRYHRAPKALFGGKLDQSAMVETVVLVACRGGLHDQEVFMDYRFNPNMRHPDWYSPVDPEATAEMWAVDKQDSTAQTLLNNSWFRRRS 384
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BLAST of mRNA_P-littoralis_Contig634.26.1 vs. uniprot
Match: W7TPU3_9STRA (Uncharacterized protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TPU3_9STRA)

HSP 1 Score: 149 bits (377), Expect = 3.520e-37
Identity = 122/383 (31.85%), Postives = 175/383 (45.69%), Query Frame = 2 
Query:  164 REMQEQVDITRAAVLTSAYALARQXXXXXXXXXXXXXXXXYSYDMLEKEIEAMKPSARKRRTQIA---LNEQVVNYFALVHAAQNATPPP-------GLLDTSGGSGGASPVEGLSCPGTEQEGTTPTSATXXXXXXXXXXXXXLGAGTVVEREAERTAERKAVEAWRRKLLKEMLRSELGFNTLVKDSSLPGGGAGLGLFVEGSAAEGAVVAIYPGVVHLPEHLRSQKYAAALLPDEEHFLMGRADGCLVDGRTAGLLPSSPLTFAHAANHPPKGEAANVLQVAYDYPALSDGDVGIAKGGRFPERLRPLVPNRYHRPPKAVFGGKLDQSAMVETVVLVACRGGLHNQEVFMDYRFNPNMPH---PDWYSPVDPTATDKMWA 1273
            R++QEQ DI  A +LTS +                          L++E E M+  A  ++  I    L++Q++  F  + AA+             G  + +GG+GG++       P   +     +S                     + R  ER     A E+ RR  + + LR +LGF      SS+    AG G+F+EG A  G++V IYPG+V+LPEHLR  +  A L PD + FL  R D  +VDGR A  +P +    AH  NH       NV+ VAYD+P    G       G FP  LRP +PN + RP   +  G  DQSA++++VVLVA       +E+F++YR NP       P WY PVD     + WA
Sbjct:   20 RDLQEQADIETALLLTSWWKCIT-------------IGHQEDRQTLQQEAERMQSMAGYKQVNILRKNLDQQILRMFLAIDAARTVEETTKASRMHHGFEEINGGTGGSTQAREDWRPPNRRRRPQTSS---------------------ISRRGEREDMESARESARRGRVFKSLRQDLGFTLCHGPSSILS--AGRGVFLEGRARIGSLVGIYPGLVYLPEHLRKAEEVAELFPDPDIFLFQRYDKIVVDGRAAEKMPHNEYALAHLCNH----GKPNVMAVAYDFPQDPLG------WGGFPHELRPYIPNAFARPRSLL--GSPDQSALIQSVVLVATTDLEDGEELFLNYRLNPKHGSESLPPWYVPVDAKEDQRRWA 354
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BLAST of mRNA_P-littoralis_Contig634.26.1 vs. uniprot
Match: A0A835ZBE7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZBE7_9STRA)

HSP 1 Score: 140 bits (354), Expect = 1.340e-34
Identity = 81/186 (43.55%), Postives = 114/186 (61.29%), Query Frame = 2 
Query:  644 LLKEMLRSELGFNTLVKDSSLPGGGAGLGLFVEGSAAEGAVVAIYPGVVHLPEHLRSQKYAAALLPDEEHFLMGRADGCLVDGRTAGLLPSSPLTFAHAANHPPKGEAANVLQVAYDYPALSDGDVGIAKGGRFPERLRPLVPNRYHRPPKAVFGGKLDQSAMVETVVLVACRGGLHNQEVFMDYR 1201
            LL+  LR+ LG++  +K S L G  AGLGL+VEG A  G+V+ ++ G+V+ P+++R  +Y A L PD+   L+ R D  ++DGR        PL  A  ANHPP+G   NV+QVAYDYP    G         +P  LRP VPN+Y   P   +GGK+D + M+E++VLVA    L ++EVFM+YR
Sbjct:  106 LLQRELRATLGYSVALKPSRLKG--AGLGLWVEGYAPTGSVIGLFSGLVYAPQYVRRPEYQAELFPDDNMQLIMRYDNYIIDGRKTQGCNWHPLGVASMANHPPEGRLPNVMQVAYDYPT-EVGSTAATTRTTYPAELRPYVPNQYRAVP-TFWGGKIDSTVMMESMVLVATTD-LQDEEVFMNYR 286
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BLAST of mRNA_P-littoralis_Contig634.26.1 vs. uniprot
Match: W4GU79_9STRA (Uncharacterized protein n=2 Tax=Aphanomyces astaci TaxID=112090 RepID=W4GU79_9STRA)

HSP 1 Score: 137 bits (346), Expect = 3.370e-33
Identity = 84/220 (38.18%), Postives = 123/220 (55.91%), Query Frame = 2 
Query:  620 AVEAWRRKLLKEMLRSELGFNTLVKDSSLPGGGAGLGLFVEGSAAEGAVVAIYPGVVHLPEHLRSQKYAAALLPDEEHFLMGRADGCLVDGRTAGLLPSSPLTFAHAANHPPKGEAANVLQVAYDYPALSDGDVGIAKGGRFPERLRPLVPNRYHRPPK--AVFGGKLDQSAMVETVVLVACRGGLHNQEVFMDYRFNPNMPHPDWYSPVDPTATDKMWA 1273
            A EA   + L E++R ELG++  V+DSS+PG  AG GLF+EG A  G  +A+YPG V+L EH R +KY   +      F   R DG ++D     +  ++PL  A   NHPP     NV+ +AYD+P                +    L+PNR+  PP   A+FG +    A+V ++VLVA    + ++EVF++YR+NPNM +P WY+PV+      MW+
Sbjct:  112 AQEAKGAETLDEIVRRELGYSLHVRDSSIPG--AGRGLFLEGRATAGTAIALYPGTVYLSEHYR-KKYLHVV--SNNPFARARFDGAIIDATGEAIPHANPLALAQLVNHPPPDTMPNVIPMAYDFPPADPFQT---------DPHHALIPNRFVHPPSMLAMFGKR----ALVHSLVLVALTD-IEDEEVFLNYRYNPNMEYPPWYTPVNRDEDLNMWS 312
[Close]
BLAST of mRNA_P-littoralis_Contig634.26.1 vs. uniprot
Match: A0A024UXH6_9STRA (Uncharacterized protein n=2 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024UXH6_9STRA)

HSP 1 Score: 134 bits (337), Expect = 6.240e-32
Identity = 79/220 (35.91%), Postives = 124/220 (56.36%), Query Frame = 2 
Query:  620 AVEAWRRKLLKEMLRSELGFNTLVKDSSLPGGGAGLGLFVEGSAAEGAVVAIYPGVVHLPEHLRSQKYAAALLPDEEHFLMGRADGCLVDGRTAGLLPSSPLTFAHAANHPPKGEAANVLQVAYDYPALSDGDVGIAKGGRFPERLRPLVPNRYHRPPK--AVFGGKLDQSAMVETVVLVACRGGLHNQEVFMDYRFNPNMPHPDWYSPVDPTATDKMWA 1273
            A+ +  ++ + +++R ELG++  V+DS++PG  AG GLFVEG A  G  +A+YPG V+L EH R +KY   +      F   R DG ++D     +  ++PL  A   NHPP+    NV+ +A+D+P                E    L+PN +  PP   A+FG +    A+V ++VLVA    + ++EVF++YR+NPNM +P WY+PV+      MW+
Sbjct:  112 AIPSKTKETIDDIVRRELGYSLQVRDSTIPG--AGRGLFVEGRATAGTAIALYPGTVYLSEHYR-KKYMHVV--SNNPFARARFDGAIIDATNEAVPHTNPLALAQMVNHPPQDTLPNVIPMAFDFPPEDPFQS---------EPYHSLIPNHFVHPPSMLAMFGKR----ALVHSLVLVALTD-IEDEEVFLNYRYNPNMEYPPWYTPVNREEDLNMWS 312
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BLAST of mRNA_P-littoralis_Contig634.26.1 vs. uniprot
Match: A0A1V9Z388_9STRA (Uncharacterized protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9Z388_9STRA)

HSP 1 Score: 127 bits (320), Expect = 1.470e-29
Identity = 77/214 (35.98%), Postives = 118/214 (55.14%), Query Frame = 2 
Query:  641 KLLKEMLRSELGFNTLVKDSSLPGGGAGLGLFVEGSAAEGAVVAIYPGVVHLPEHLRSQKYAAALLPDEEHFLMGRADGCLVDGRTAGLLPSSPLTFAHAANHPPKGEAANVLQVAYDYPALSD-GDVGIAKGGRFPERLRPLVPNRYHRPPK--AVFGGKLDQSAMVETVVLVACRGGLHNQEVFMDYRFNPNMPHPDWYSPVDPTATDKMWA 1273
            K ++  L+  +GF+  V +SS+ G  AG GLF++G+A  G +VA+YPG V+L EH R + +          +   R DG ++D R   +   + L  A   NHPPKG + NVL VA+D+P+         AK           +PNRY   P   A+FG +     +V  + LVA    + ++E+ ++YR+NP +P+P+WYSPVD  A +KMW+
Sbjct:  118 KSIESYLQEAIGFSLRVSESSIAG--AGDGLFLDGTAVAGTLVALYPGTVYLSEHYRKKYFDVV---SNNPYARARFDGAIIDARHEAIPHVNHLGLAQKVNHPPKGLSPNVLPVAFDFPSTEPFTSADFAK----------YIPNRYVEEPSRFALFGRR----GLVPGLALVALHD-ISDEELLLNYRYNPALPYPEWYSPVDREADEKMWS 311
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BLAST of mRNA_P-littoralis_Contig634.26.1 vs. uniprot
Match: A0A485L2C1_9STRA (Aste57867_14760 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485L2C1_9STRA)

HSP 1 Score: 127 bits (320), Expect = 1.500e-29
Identity = 75/207 (36.23%), Postives = 115/207 (55.56%), Query Frame = 2 
Query:  659 LRSELGFNTLVKDSSLPGGGAGLGLFVEGSAAEGAVVAIYPGVVHLPEHLRSQKYAAALLPDEEHFLMGRADGCLVDGRTAGLLPSSPLTFAHAANHPPKGEAANVLQVAYDYPALSDGDVGIAKGGRFPERLRPLVPNRYHRPPK--AVFGGKLDQSAMVETVVLVACRGGLHNQEVFMDYRFNPNMPHPDWYSPVDPTATDKMWA 1273
            +R ELG++  V+DS++PG  AG GLF++G A  G  +A YPG V+L EH R +KY   +      F   R DG ++D   A +   +P   A   NHPP     NV+ +A+D+P                E     +PNR+  PP   A++G +    ++V ++VLVA    + ++EVF++YR+NP+M +PDWY+PV+     KMW+
Sbjct:  125 VRQELGYSLSVRDSTIPG--AGRGLFLDGHAPAGTAIAFYPGTVYLSEHYR-KKYLHVV--SNNPFARARFDGAIIDASEAAIPHVNPFALAQMINHPPAETMPNVIPMAFDFPPEEPFTS---------EPHHSFIPNRFVHPPSMLAMYGKR----SLVHSLVLVALND-IQDEEVFLNYRYNPSMEYPDWYTPVNRDEDLKMWS 312
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BLAST of mRNA_P-littoralis_Contig634.26.1 vs. uniprot
Match: A0A1V9YV75_9STRA (Uncharacterized protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9YV75_9STRA)

HSP 1 Score: 126 bits (317), Expect = 3.840e-29
Identity = 72/212 (33.96%), Postives = 115/212 (54.25%), Query Frame = 2 
Query:  641 KLLKEMLRSELGFNTLVKDSSLPGGGAGLGLFVEGSAAEGAVVAIYPGVVHLPEHLRSQKYAAALLPDEEHFLMGRADGCLVDGRTAGLLPSSPLTFAHAANHPPKGEAANVLQVAYDYPALSDGDVGIAKGGRFPERLRPLVPNRY-HRPPKAVFGGKLDQSAMVETVVLVACRGGLHNQEVFMDYRFNPNMPHPDWYSPVDPTATDKMWA 1273
            K ++E ++  +GF+  V +SS+P   AG GLF++GSA  G VVA+YPG V L EH R + +          +   R DG +++ +   +  ++    A   NHPP G   NVL +A+D+P L              E     +PN+Y  +P     G +L  S   + + LVA    +H++E+ ++YR+NP++P+P WY+PVD  A +KMW+
Sbjct:  117 KSIEEYVQDRIGFSLKVGESSIPD--AGRGLFLQGSALAGTVVALYPGTVFLSEHYRKKYFDVV---SNNPYARARFDGAIINAKDEAIPHANHFALAQLVNHPPSGTLPNVLPMAFDFPNLEPFTN---------EEFAKYIPNKYIEQPSLLAMGNQLKSSC--KGLALVALYD-IHDEELMLNYRYNPSLPYPSWYTPVDKEADEKMWS 311
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BLAST of mRNA_P-littoralis_Contig634.26.1 vs. uniprot
Match: A0A067C2W7_SAPPC (Uncharacterized protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067C2W7_SAPPC)

HSP 1 Score: 125 bits (315), Expect = 7.300e-29
Identity = 70/206 (33.98%), Postives = 114/206 (55.34%), Query Frame = 2 
Query:  659 LRSELGFNTLVKDSSLPGGGAGLGLFVEGSAAEGAVVAIYPGVVHLPEHLRSQKYAAALLPDEEHFLMGRADGCLVDGRTAGLLPSSPLTFAHAANHPPKGEAANVLQVAYDYPALSDGDVGIAKGGRFPERLRPLVPNRYHRPPK--AVFGGKLDQSAMVETVVLVACRGGLHNQEVFMDYRFNPNMPHPDWYSPVDPTATDKMW 1270
            ++  +GF+  V+DS++    AG GLF++G+A  G +VA+YPG V+L EH R + +          F   R DG +++ +   +  ++    A   NHPP G + NVL VA+D+PA               +   P +PNRY   P   A+FG +     +V  + LV     + ++E+F++YR+NP++P+P+WY+PVD  A +KMW
Sbjct:  124 VQDHVGFSLQVQDSTIDN--AGRGLFLQGTAVAGTLVALYPGTVYLSEHYRKKYFDVV---SNNPFARARFDGAIINAKDQVIPHANHYALAQMVNHPPAGTSPNVLPVAFDFPAAEPFTS---------DAFAPYIPNRYVEQPSLFAMFGKR----GLVPGIALVTLHD-VTDEELFLNYRYNPSLPYPEWYTPVDKDADEKMW 310
[Close]
BLAST of mRNA_P-littoralis_Contig634.26.1 vs. uniprot
Match: A0A482SV53_9ARCH (Uncharacterized protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SV53_9ARCH)

HSP 1 Score: 122 bits (307), Expect = 5.900e-28
Identity = 75/186 (40.32%), Postives = 103/186 (55.38%), Query Frame = 2 
Query:  677 FNTLVKDSSLPGGGAGLGLFVEGSAAEGAVVAIYPGVVHLPEHLRSQKYAAALLPDEEHFLMGRADGCLVDGRTAGLLPSSPLTFAHAANHPPKGEAANVLQVAYDYPALSDGDVGIAKGGRFPERLRPLVPNRYHRPPKAVFGGKLDQSAMVETVVLVACRGGLHNQEVFMDYRFNPNMPHPDWY 1234
            F+  VK S LP  G G+ +    S   G V+A+YPG+VHL EHLR+++   ALLPD    LM R D  +VD RTA L P +P    H  NH  K +  NV+QV+YD+P     D+   K   FPE +R L+PN+Y + P  V+G     +  +++VV ++        EV MDYR +P    P WY
Sbjct:   90 FSLEVKQSLLPNAGEGVFVHTSASLIPGTVMALYPGLVHLKEHLRNKQNLFALLPDPHLMLMSRMDQSIVDARTAHLCPPNPYALGHKINHCGK-KKPNVMQVSYDFPE----DLLQPKNS-FPEEMRYLIPNKYAKDP-TVWGKMEMHNVAMKSVVFISTGFIEDGDEVVMDYRLDPIKELPQWY 268
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig634.26.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FT86_ECTSI4.150e-18670.17Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
W7TPU3_9STRA3.520e-3731.85Uncharacterized protein n=2 Tax=Monodopsidaceae Ta... [more]
A0A835ZBE7_9STRA1.340e-3443.55Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
W4GU79_9STRA3.370e-3338.18Uncharacterized protein n=2 Tax=Aphanomyces astaci... [more]
A0A024UXH6_9STRA6.240e-3235.91Uncharacterized protein n=2 Tax=Aphanomyces invada... [more]
A0A1V9Z388_9STRA1.470e-2935.98Uncharacterized protein n=1 Tax=Achlya hypogyna Ta... [more]
A0A485L2C1_9STRA1.500e-2936.23Aste57867_14760 protein n=1 Tax=Aphanomyces stella... [more]
A0A1V9YV75_9STRA3.840e-2933.96Uncharacterized protein n=1 Tax=Thraustotheca clav... [more]
A0A067C2W7_SAPPC7.300e-2933.98Uncharacterized protein n=2 Tax=Saprolegnia TaxID=... [more]
A0A482SV53_9ARCH5.900e-2840.32Uncharacterized protein n=1 Tax=archaeon TaxID=190... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig634contigP-littoralis_Contig634:130668..139395 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D7FT86
Model size1481
Max annot lvl2759|Eukaryota
Hectar predicted targeting categorymitochondrion
Exons6
Evalue6.11e-188
EggNOG OGs28PNT@1|root,2QWAW@2759|Eukaryota
Ec32 ortholog descriptionconserved unknown protein
Ec32 orthologEc-06_003720.1
Cds size1230
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig634.26.1prot_P-littoralis_Contig634.26.1Pylaiella littoralis U1_48polypeptideP-littoralis_Contig634 130810..139286 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791323.4074855-UTR-P-littoralis_Contig634:130667..1308091680791323.4074855-UTR-P-littoralis_Contig634:130667..130809Pylaiella littoralis U1_48UTRP-littoralis_Contig634 130668..130809 -
1680791323.49356-UTR-P-littoralis_Contig634:139286..1393951680791323.49356-UTR-P-littoralis_Contig634:139286..139395Pylaiella littoralis U1_48UTRP-littoralis_Contig634 139287..139395 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791323.4203417-CDS-P-littoralis_Contig634:130809..1308281680791323.4203417-CDS-P-littoralis_Contig634:130809..130828Pylaiella littoralis U1_48CDSP-littoralis_Contig634 130810..130828 -
1680791323.4354186-CDS-P-littoralis_Contig634:131158..1312951680791323.4354186-CDS-P-littoralis_Contig634:131158..131295Pylaiella littoralis U1_48CDSP-littoralis_Contig634 131159..131295 -
1680791323.444708-CDS-P-littoralis_Contig634:133908..1340141680791323.444708-CDS-P-littoralis_Contig634:133908..134014Pylaiella littoralis U1_48CDSP-littoralis_Contig634 133909..134014 -
1680791323.454599-CDS-P-littoralis_Contig634:135499..1357951680791323.454599-CDS-P-littoralis_Contig634:135499..135795Pylaiella littoralis U1_48CDSP-littoralis_Contig634 135500..135795 -
1680791323.469273-CDS-P-littoralis_Contig634:137918..1383291680791323.469273-CDS-P-littoralis_Contig634:137918..138329Pylaiella littoralis U1_48CDSP-littoralis_Contig634 137919..138329 -
1680791323.4837737-CDS-P-littoralis_Contig634:139025..1392861680791323.4837737-CDS-P-littoralis_Contig634:139025..139286Pylaiella littoralis U1_48CDSP-littoralis_Contig634 139026..139286 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig634.26.1

>prot_P-littoralis_Contig634.26.1 ID=prot_P-littoralis_Contig634.26.1|Name=mRNA_P-littoralis_Contig634.26.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=410bp
MLIARALLAKIRPPRLNPREMQEQVDITRAAVLTSAYALARQQQQQHQQQ
HGHGDSEAYSYDMLEKEIEAMKPSARKRRTQIALNEQVVNYFALVHAAQN
ATPPPGLLDTSGGSGGASPVEGLSCPGTEQEGTTPTSATASPSPSLSSTT
TTLGAGTVVEREAERTAERKAVEAWRRKLLKEMLRSELGFNTLVKDSSLP
GGGAGLGLFVEGSAAEGAVVAIYPGVVHLPEHLRSQKYAAALLPDEEHFL
MGRADGCLVDGRTAGLLPSSPLTFAHAANHPPKGEAANVLQVAYDYPALS
DGDVGIAKGGRFPERLRPLVPNRYHRPPKAVFGGKLDQSAMVETVVLVAC
RGGLHNQEVFMDYRFNPNMPHPDWYSPVDPTATDKMWAVGRGDGAARTIL
DYSWFRRRS*
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mRNA from alignment at P-littoralis_Contig634:130668..139395-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig634.26.1 ID=mRNA_P-littoralis_Contig634.26.1|Name=mRNA_P-littoralis_Contig634.26.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=8728bp|location=Sequence derived from alignment at P-littoralis_Contig634:130668..139395- (Pylaiella littoralis U1_48)
CTGCATGACTGCTGTTATCCTCCCCTAGTTGTCAATCCAAACCAAACTCA
ACCGCGGTTCACCTCCTGTCGCACACACAACGCCAACGCAACTGCTGCTG
GGCGTTACCATGCTGATTGCCAGGGCGCTGTTGGCGAAGATTCGTCCACC
GCGGCTGAACCCTAGAGAAATGCAGGAACAGGTGGACATTACCCGTGCGG
CTGTCCTGACCTCTGCCTATGCCCTTGCTCGGCAGCAGCAGCAGCAGCAC
CAGCAGCAGCACGGCCATGGGGACAGTGAGGCGTACTCGTACGACATGCT
CGAGAAGGAAATCGAGGCGATGAAACCATCGGCGAGGAAGCGGAGGACAC
AGATAGCACTGAATGAACAGGTGAGCACGACGCTCCACCGCCGTATTCTA
CATGCAACGAGCAGTATGAGGTCACTGCTGATGCTGCTGCGAGATATGTA
CCTGTGTACCTGCTACTGATCTGCGTCTTGCGGCCTGACCAACGGCGCGA
ACGTACAAGTACAGCGCAATCAATCGCCAGTCCTGTGTTTACCGCCATTG
CTGCTCCGCCCAGTGAAATAGATCGCACAGACAGCAGCAGCAGCACTTGC
AAACGTTCGCGGTCTGTGTCGTTGGCAGTCCAAACGAGAAAGCAAGGACA
AATGTCAAACACACTGTGTGTTGTCATCCCATATTCTCTGGCACACTAGT
CTGCAAACTACAGGCTAGGCCCATCGACGGGGTCACACAGGAGGAAGGTG
AACACAGGAGGAGTTACCCCCACCTTCCTTCTGCGGTACATGCGTGAGGT
GTTTTCTCGCGAGCAGGGGTCCGCGGTTCCTACCCTCGTCGGCGAAGCCG
AATCTGCTTTTACTAACAGCATCGCCGCTTTCAAAGTAGCAAAGGGACAC
TGATAGTCGAGGTCTGATTGGTCGAATCAAAAACCCTTTTGCGTACTGTA
TGATCATGTGTGTTACAGCATGTCCGCCGCACCCCGACTCCTGCGCCTAC
GGACGCTCGCTCGCCCTCGTCCTCGCCCTCGTCCTCGCCACCCCCCCCCC
CAAACAAAATGCACAGGTGGTGAATTACTTTGCTCTTGTCCACGCGGCCC
AAAACGCAACCCCTCCTCCGGGCCTCCTCGACACTAGCGGCGGTAGTGGC
GGCGCTAGTCCTGTCGAGGGCCTCAGCTGCCCCGGCACAGAACAGGAGGG
CACCACTCCCACCTCCGCCACCGCGTCGCCATCGCCATCGTTGTCGTCGA
CTACGACGACGCTTGGCGCAGGTACCGTCGTCGAGCGAGAAGCGGAGAGA
ACAGCCGAGAGAAAAGCCGTCGAGGCGTGGAGACGGAAGCTGCTGAAGGA
GATGCTAAGGTCGGAGCTGGGTTTCAACACCCTGGTGAAGGATTCCAGCT
TGCCCGGCGGGGGAGCCGGGCTGGGGCTGTTCGTAGAAGGTTCGGCTGCG
GAAGGCGCCGTTGTGGCAATATATCCGGTATGTATGTGTTCGTGTGTGAC
ACAGAGGAAGAGAACGAGAGAGACACTTTTGTTTGGACGGCATGAACCGG
GCCATAAGATATTCTGAGACAGAAAAAAAGATTGAATTGAACCCCCCACC
TCGCCAAACCCACACACCAACACACACAAACAACGTCGATACCTCTTACA
GTATATGAGGTGGCTATCCTGCCGCACTCTAGGGCTTTGACTCCCACGGT
CGCAACCGTAACGCGATAAAAGGGGGGCTCGTTGACATACACGATCACCT
GCCAAGCACGCATAACGTGCCATCTCCCTGTGTCTCCACCACGCATAATC
AATCGTTCACGCGTTCAACAAAAAAATGCGGTTTCATGTCATGCCTCTCT
CAGTCATGCTGGCGCCGTGCGCGCGTGAGCCAACCTCTGTCGTAGACCCG
GTGGTGCATCACCGATCACCGCAGTGGGTGGCAGAGGCTAGCGCCGGGCC
GCCGTAAGGCTAAGCCCCTTTGCTGTAAAGTCAGCAGGAAAAGTCGAGAG
ATGCCACAGCAGTGGGCTCTCTGTTGAGCCGAAGCTCGGAGAAGATAGTT
GTTGTGCTGGTGACTCTGACCAGGCTTTGTTGACTATCTTGGTAGACGAA
GAGAGAGTGAGAGAGTGGGGGCGGGTAAGCCATGCACAATGCACGCTCCT
AGAGCTCTCCAAAACAAAATCTTGAAACAAAAACAAAATAAACTAACGGG
CTATTTGGGGTCACGGTTCTCCGGGTCACCGCCTTGCTATTCCCCCGAGG
GTTCTACTGAAACGGTAATTTACCAACCGCTCTACAGTTTCCTGTCCGTA
CTTCGTCTGAACTAAGCAGGCTGAGCTACATACATACACACATCATGTCT
ATACTTCTTGCTGATAGCAAACTTACACTATCCATCGACAGCGAAACCAA
TAGGGCTGCTATGTGTTGTCATCCCATATTCTCTGGCACACTAGTCTGCA
CCTTGCGGTTCAAACTACAGGCTAGGCCCATCGACGGGGTCACACAGGAG
GAAGGTCAACACAGGAGGAGTTACCCCCACCTTCCTTCTGCGGTACATGC
GTGAGATTTTTTCTCGCGAGCAGGGATCCGCGGTCCCTACCCTCGTCGGC
GAAGCCGAATCTGCTTTTTACTAACAGCATAGCCGCTTTCAAAGTAGCAA
AGGAACATATTCGCCGGGAATCGAACCCCCGTTCCTCTGCATCTAGTGGT
TAACGAGGGGACCACTAGTCCACCGGGGCGACCAATAGTTATGTATTACT
TCTTCGTGCAATCATATCCTCTGTAACAGTGGTGTTTGCGATATGTACTT
TCAGCTCGAGCCACCTATCTAAATTATGTACAGCAGTGTACAGCAGTGCA
TGCCTCAAAGCAGAGCCTACATCTAACAACCTCTCCCCCTGTCCTTTTCG
CTTCGTTCTGAGGGCGGCGGTTTCCGGTGTAGAGATACCATCGACCGTGT
TATCTTTTTCGTGTTTCGCGCTCCTCTGTAGCAGAGGGGGGTGCTTTTCT
TTCGCCCATCATATCATACCTGCTCAAGCACCCTGCGCAGGCAGCCCGCA
CTCTTGAGTACAGTGTGAACAGCAGTCTGCTTGAGACAATTCGAACAGTT
GCGTCAGCGACCGACCTCAGTTCCCGAATCCTAGAACAGGTGTACTTGTA
TGTACTTCGAGAATGCATGTACTGTATGTACGTATGTACTTCGTACCCCC
CCAGACGAGGAGCGCTCGCTCACTTCTCCCTCATACAGCACGAGAAAGCC
GAGAGACGAAATCAGTTTGGTGCATTCCAAGCAAGAACAACATCGACACA
TCCCCTTTCTCCCGTCTTCCTCGCCGCCTCCTCCTCCTCCTCCTCCTCCT
CCTCCTCCTCCTCCTCCTCAACCTGCTCTTGGCCCCCGGGTCCAATCTAC
TCTTAATTCATCGTCGCTTTTTTTCTTCGTTTTTTTTTTTTGCACTTGTC
GTCTTTAGGTACGTACGTATCATATGATATGTAGCATTTCTAATTTATTT
GCGTGTGATACCATCAACCGTTTGCATGATAACAATACGTCATGTGTATG
ATGACCATACGCCATATGATATCGCGTGCAAATAAAAATAAAAATAAAAG
GGCGTGGTCCACCTTCCCGAGCACCTGCGGAGCCAAAAGTACGCCGCCGC
CCTGTTGCCGGACGAGGAGCACTTCCTCATGGGAAGGGCCGACGGGTGCC
TCGTGGACGGGCGCACCGCGGGGCTGCTGCCCTCCTCCCCGCTCACGTTC
GCGCACGCGGCGAACCACCCCCCGAAGGGCGAGGCGGCGAACGTCCTTCA
GGTGGCGTACGACTACCCGGCCCTCAGCGACGGCGACGTGGGGATCGCGA
AGGGGGGCAGGTTTCCGGAGCGGTTGCGGCCGCTCGTACCCAACAGGTAT
GGCAGAGAAATGTTTACGCTGTATGATATTATTTTCTTCTCCTTCTTCAT
GCGATATCATACATCGCTATTCTTTGTTTTCCTTCTTGCGCGCACCTATG
TATGATATCATACGATATTCGAGGCCTGCTTTTTGTAAACGTATGCATGG
GATAGCTGACCGACTACACAGCAGCAGTAGTCCTGAAAGAGACAGTTTTT
TCGCTCGAGTTTTGACATCATCCATCCACGTGTGTCGAATCGGTTTGTGG
GGGGAGGCGAGTCCCCTCTTTTCACGGGACATGAAAATCTTTCACCGCTC
CAAGGCTCTCGTTCAGGCAGATTCATACCGTTATCGTCGCGGCATATCTT
TCGCTTTCGTCGCCGGGCTGGAGTCATACCCCCCCCTTCCCGGCGAAATT
TGATCCAGATTTTGTTTTTGCTCGATTTTTTACAAGCGATCTGAATGTAT
GATGTCCCCTCGAGGAGAAAATTTGAAAATTCCTGTCAGAGAAAATTTTA
AAAATATTTGAATATTTGGTATTCCAGAGCGGGATATTTGGCGAAAAATC
CACACTTTTTTGGTGCTCCAGCTATCGAGGTTTTATTTAGCGCAAAATTA
GCACGGCGAATGCGCCGAAGAACTCCTCAGAGTGGGACGATTTGGGCCTG
TATCGAGGAACTTTTTTTTTCAAGAAAGTCTTTCCGTCGGGCGATATGTC
GTGCGTCGAAGTTGGTTTTTCTTCACTAGTCCACGGTGTACTTTGTGGAA
AACAACATTTCACCAAAGTTTTGCACTCGTCGCAGGTAGTTCAAAGCACG
CAGTAGTGTCTGTTGCCCACCTCGCAGGTATTCGCTCTCAAATAGTCGCT
GAATATTCGCAAAAGTAGTTACTGCATCATTCCAACTTCAATGGGTTTTG
TGACGTGGTACATGGAATGAACACACACGCACACACACACACACACGCAC
ACCGGATTATTGTTTGCCCTGCCCATGCGACAACTGCAGTGTGCTTGGTT
TCACTTTTCAACTCTCAAAAATGACGGAGAAATGAAGGACCCCCGTGCAT
TGTACGAGTAGTGAAACGTTTGTTGCGTGGACCAAATGATGCGCATTGCA
TACTCCGAGCTTGCACGAGTATCGTGTGTTCGTGCAGCACTCTTTTACCA
GTTTAGTAAGCGATAAATGAAAGAAAGCACCGCGATTTCCTTTCCTTTCG
TGTGACACGTAAAATACTTAAAGCACAATGTAGTATGATACCGCATCATA
TCATACGCACGACCTGTTTTTTCCCCTTGCTGCCGTGTGCCTACCTGACT
ACTTTGCGCCTTGAGTTGGGTCACCTGATTTGGGCCGGCTGTGTTGAATC
CGACGGTAGGCACTTCCTGGTTGTATCACCCCCATCTCTGCAGAGCCAAA
ATTATGGCTCCTGAACCATTCAGAGTGATTTGATCGTCTTGCTTGTGTCG
ATTGAATCGGTTGGGGCACCGGCGCCTTTAGGTATCACCGCCCTCCGAAA
GCGGTGTTCGGAGGCAAGCTTGACCAGTCGGCCATGGTCGAGACCGTCGT
CCTGGTGGCCTGCAGGGGCGGGCTGCACAACCAAGAGGTGCTTTTGCTGA
AGGATAAGTTGTCGCAGAAGTAGTAGATCTGGTACTGTTACTAGTAGTAG
TGAGGAAAGTAGCAATAGTGGTGTTTGTTGTTGTCGTGAGTGAAATGTCG
TAAGTGTAGCAGCTGTTGTTGTCGTCGTTGGTGGTGGTGGTGGCGGTAGT
GGTTATGGTGGTGCTGGTGCTGGTGGTGGTGGTGGTGGTGCTGTTGTTCC
TGTTGTTGCCGTTGTAGCCTTCATATTGTGAACCGTTCGGGCCTTCCTTC
TCTTTCTGCGGTGCCGCTATTTAGCCCACGACGACGCTTCCTGCCATCGT
TGCCGTGCTGTCCTAAATGTTCCCACCCGGACAAACAATCATCGAACGCT
ATGATTGCCCATCGTACTGTGCTGGCAAGAGAAGTTCGGAATACTGTAGT
TCAATCGAGGAGGCAGAAAAATGTGCGCCCGGACGAACAATTATGGGCCG
AAAGTTACCGCGCAGTAGAATGAGGACACAAGCTTGGAGCACAGGAAGGT
CCGTGGTTGATAGGTTTGGGGAAGAAAGAGGTAACGGATGAGATCATCTC
GATCCTCATCTCGATCCTCAAAACCGCCCACAAACACACACCTGCTGGCG
AACAAGATGGGTAGAGTGAGGACGCTCAACGAGAGCACGAAAGACAGCGC
AGGAGAGTCCATCAGTATTTCCAGCAGCAACGGCAGCAGCAGCAGTCTAG
CAGCAGCAAAAAGAGAGAGAACAAACAAAACTGCTGTAGCAGTGTCGCTG
CAGAACCGCAGGACGCACACACGAAACACACACGGGTGTCGTCTTTGTCC
TGGCAACACACGCGAACGTGAATAGAGGTGGCTCTGGGTGGAGAAGCGGG
TACACGCTCGATGGGGTTCGCAGTTCTGTTTAGGAGGGCAGAGGCCATTA
TCGATGGAAATAGGCAAAGGCAGGCATATTGGCACGTTCTTTGGAGTCAG
TCGAGATTATGACGTGGAACTCACTGTGTGAGCGTGTTGTCATATTATCT
ATTCTGGACGGCAGTCTACACCTTGCGGTAAAAGCTGGGCGCACTAGCTG
GGGTCACACAGGAGGACAAAGTTGTCGTTTTTCTCAAGGTTTCGCGAAAA
CGGGAACACAGGTGCAGATAGTTTTTGGACAGCCGAGCCTGTTTAAGCTG
AAGGGTAACGATTTCTTATCGAGTGTCAAGACGAATAAAAAATGCTGGTC
TCGCAAAAGCGAGACCAGGTAACGAGAGGTGGTACGCGAGCTGCTTCTCT
CTCTCTCACACACACACACACACACACACACATTCGCATGGCGTAACGAG
GATTGCCAAGAACGACCGCCTGTATCCGTTTTCCTTTCTCCTCGCAATGC
CATGCGAATGTGTAAATAATACAGAACAGCGCGCGCGTCACCCTTCCCGC
GGCTGGGTCTCGCTCCCTGACGGTTGCCGGTTTTGCTGCATGCCAAAAGA
AACAAGCGGCACACGTCATATATTTTTTATCAGGGTTCATCGTCTCTCCA
TCCATTCGGGGTGGGTCGATCCCCCGAGTCACATCTGCTGTGTGTTTTGT
GTTTTTTGTGCCCGGAGCGGAGCGTGTCGTTTTCTTTTTTTCTTTTTTTT
CACTGCCGTGTGTTGATCAACTCTCCTCTCTGAGCCCCAAAAAAAACTTA
CGTATCATACAAAATCCCTGCGGTAACGATGTGTATGCCTTGTCGACGTA
CAAGTATGCGTGCGGCAAAAAGCGGGCGTCCGGCGAGAAGAGCGAGAGAA
GGGTGGCACGCGCGTCCTGATCCTTGTGCATGCCTCTCGCGCGGCACAAC
GAGGGCAATTAAAAAACTGGTGCTCGGGCACCCGCTTCATGCATGGTCTC
CTCCTCCTCATCCCTGGCAACCGAGCGCCCGCTTCGTGTATGGTCTCCTC
TTCCTCATCCCTAGCAACCTTGCAGCAGGGTTGGAAGGGGTGTGTGGAAG
GAAGAGGCGGACACGCGTGAAGCGCGCCCCCAAGGACCCATTTTTTAATT
GCCCTCGTTGTGCCGCGCAAGAGATGTATTCTAGGATCAGGGCGCACGTG
TCACCCCTCGCTTCTTCACTCCGGCCGACGGATTTTGCCGCATGCCTCAA
CAAGCGGCAGCACATCATGATGTTTTTTATCAGGATATACAGCAGTACTG
CTTTGTCTGTCCGTCCGGGTTCTCACCGCCGTTTGTCGATCGATCGTCCT
GAAAGCCAACCCAACTCATATTAACCCCCCCCCCCTTCCGTTCCGTACCG
TAATGCGTGGTATTTGGGTGACATAAGGACAAAATGTTATGTTTGTTAAT
TTTATAGAGGCGAGAGGAGGTTGCTTTGCTTGCTTAAGGGGCATAGGAAA
CAGAGATGCAAAAGTGACCGAACCTGGCCTGCCTGGTTTGTCTGCTTGCT
TGTCCTCGCGGGTGAAACGGCAAGGTACGCCACCAACCAAATCAACCTGT
GACATCAATCAAACCATCAAGAGGTTTGCGTGCCGCACCACACCTTCCCC
TTGACCCTCCAACCTCCTTCTTCCCTGTCTCCCATCCTCCCCCCCTCTCT
CTCTCTCCCCGTCCACCGGCGGTTGTGAACCGAAACGTACCGCCTTCCAG
GTCTTCATGGACTACCGTTTTAACCCCAACATGCCTCATCCTGACTGGTA
CAGCCCCGTGGACCCCACGGCGACCGACAAGATGTGGGCCGTCGGCAGGG
GAGATGGCGCTGCGCGGACTATTTTAGATTATTCCTGGTGTGTGACGAAG
CGTGAACCGGGTACCTTTGCCTTGTTGTTGCTTTGTGTTGCGTGCCGGCC
GTGGCGTACGTCAGGAGGAGGTATGATATGTGTGCGTGTTTTGGTGGACT
TTTCTTTTTCAATGCCAAACAAATGCCAAATGCCACTGCTGCTGCTGCTG
CTGCTGCTGCTGCGGGTACCTGCACAGGCGTGTCTTGGTTGGGCGTGCGC
AGGGAATGCACGCCACAGGCATCGTCTCCATACGTCGTCTTAACGGTCGT
TTGTTGTGTCGATCGCCCCGCGCTACAACGGTTGTGCGTGTGTGCCCACG
CGCGTGTGTGTGTGCAGGTTCCGACGACGTTCCTGAGCTATTTCATCGGC
AAATACCTACAAAACGGGGCTCACCACGACAAGCACGACCGGGTCATCCC
CATCCCCCGACCATGCATGCCGTGGACTAGTCTACCGTCCTGTTGTGTCG
TCTAGAAATACCCCCCCACCTCCCCCCC
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Coding sequence (CDS) from alignment at P-littoralis_Contig634:130668..139395-

>mRNA_P-littoralis_Contig634.26.1 ID=mRNA_P-littoralis_Contig634.26.1|Name=mRNA_P-littoralis_Contig634.26.1|organism=Pylaiella littoralis U1_48|type=CDS|length=1230bp|location=Sequence derived from alignment at P-littoralis_Contig634:130668..139395- (Pylaiella littoralis U1_48)
ATGCTGATTGCCAGGGCGCTGTTGGCGAAGATTCGTCCACCGCGGCTGAA
CCCTAGAGAAATGCAGGAACAGGTGGACATTACCCGTGCGGCTGTCCTGA
CCTCTGCCTATGCCCTTGCTCGGCAGCAGCAGCAGCAGCACCAGCAGCAG
CACGGCCATGGGGACAGTGAGGCGTACTCGTACGACATGCTCGAGAAGGA
AATCGAGGCGATGAAACCATCGGCGAGGAAGCGGAGGACACAGATAGCAC
TGAATGAACAGGTGGTGAATTACTTTGCTCTTGTCCACGCGGCCCAAAAC
GCAACCCCTCCTCCGGGCCTCCTCGACACTAGCGGCGGTAGTGGCGGCGC
TAGTCCTGTCGAGGGCCTCAGCTGCCCCGGCACAGAACAGGAGGGCACCA
CTCCCACCTCCGCCACCGCGTCGCCATCGCCATCGTTGTCGTCGACTACG
ACGACGCTTGGCGCAGGTACCGTCGTCGAGCGAGAAGCGGAGAGAACAGC
CGAGAGAAAAGCCGTCGAGGCGTGGAGACGGAAGCTGCTGAAGGAGATGC
TAAGGTCGGAGCTGGGTTTCAACACCCTGGTGAAGGATTCCAGCTTGCCC
GGCGGGGGAGCCGGGCTGGGGCTGTTCGTAGAAGGTTCGGCTGCGGAAGG
CGCCGTTGTGGCAATATATCCGGGCGTGGTCCACCTTCCCGAGCACCTGC
GGAGCCAAAAGTACGCCGCCGCCCTGTTGCCGGACGAGGAGCACTTCCTC
ATGGGAAGGGCCGACGGGTGCCTCGTGGACGGGCGCACCGCGGGGCTGCT
GCCCTCCTCCCCGCTCACGTTCGCGCACGCGGCGAACCACCCCCCGAAGG
GCGAGGCGGCGAACGTCCTTCAGGTGGCGTACGACTACCCGGCCCTCAGC
GACGGCGACGTGGGGATCGCGAAGGGGGGCAGGTTTCCGGAGCGGTTGCG
GCCGCTCGTACCCAACAGGTATCACCGCCCTCCGAAAGCGGTGTTCGGAG
GCAAGCTTGACCAGTCGGCCATGGTCGAGACCGTCGTCCTGGTGGCCTGC
AGGGGCGGGCTGCACAACCAAGAGGTCTTCATGGACTACCGTTTTAACCC
CAACATGCCTCATCCTGACTGGTACAGCCCCGTGGACCCCACGGCGACCG
ACAAGATGTGGGCCGTCGGCAGGGGAGATGGCGCTGCGCGGACTATTTTA
GATTATTCCTGGTTCCGACGACGTTCCTGA
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