mRNA_P-littoralis_Contig630.11.4 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig630.11.4
Unique NamemRNA_P-littoralis_Contig630.11.4
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
BLAST of mRNA_P-littoralis_Contig630.11.4 vs. uniprot
Match: A0A6H5KMF5_9PHAE (DDE_Tnp_1_7 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KMF5_9PHAE)

HSP 1 Score: 442 bits (1138), Expect = 8.710e-146
Identity = 235/471 (49.89%), Postives = 305/471 (64.76%), Query Frame = 1
Query:    4 NAPPRKLPNGEANPDYDTKHHIRLLEEVLNKAWAENVDVNQWLAYDEQMVKIVSTYAAALGRYMPEKLITHGIKIWALCDHKGYCLISSVDGGMQGASKLRQWFNCPLDRTTRQVLWVLLGASPVLSKKLDGSGVYIAMDSFFTNPMLFECLASHDIFAVGTCRSDRTAGAAAYLESLDRTLVERGDMNFCRAGEMAFVRWKDSKDVTLCSTIHIAQPGEKECARNEGIDHFTPLPYEKRKKD-----REDDDDSTETTMQPEMRKDYCAYMGGVDTADQQNGSNAHYHKSCNNYWRRVM---IEQSLTNDFLCFRQWVPVLKCEAQRRVEDDVGDTAQKERLGCAINELGRRAKLERAK*DEVMARGLMGRCDIGSLNTGGRRQAPAKRPED-GRVWGSVRVKGARDCMNPDCTQRSSSGCSCAE-CKEGGDSGTLMCRTCFKKEASHTAAAVARVNGTTAKRRRKPMEW 1386
            NAPPR+LP GE NP+YD+K HIR LE++LN AW+ENVD+ QWL YDEQMVK  ST++  L  + P K ITHG+K++A+CD  GYCLI+S+DG  +G   LR   +CPL +TTR VL VLL     L  KL GSGV+IAMD++FT+P LF CLASH+IFAVGTCRS RT GA  Y++SL+RT    GDM FCR+GEMAFV+W+DSK++ LCST+HI + GE+       I+HF P+P   + K      +E D        QP MR DY  YMGGVD ADQQN S+ H H+S  N+WRRV    I Q LTN+FL FR WV +L  E    ++       + + L     EL R +K ER   DE ++  LM RC++G++  GG+    ++R +  G+VWGSV +K  R CM+P C++R+  GC+C E C   G  G LMC+TCF  +  + AAA A  +G     RR  MEW
Sbjct:   64 NAPPRQLPTGEDNPEYDSKWHIRDLEKILNCAWSENVDLGQWLCYDEQMVKTASTFSKGLAHFNPAKPITHGMKLYAVCDRNGYCLINSIDGSFKGDPSLRSLEDCPLGKTTRHVLHVLLEECETLRGKLVGSGVFIAMDNYFTSPTLFACLASHEIFAVGTCRSPRTCGALPYIQSLERTTPNPGDMTFCRSGEMAFVQWRDSKEILLCSTVHIGETGEE----GGDINHFKPVPLALKGKGWAGKHKEHD--------QPVMRMDYVKYMGGVDRADQQNESHYHDHRSYTNHWRRVFDAKIMQMLTNNFLLFRMWVRLLMSEVDVLMDAHNTPFEEVQELADVKKELERLSKRERVDWDEELSEILMRRCNVGTIRKGGKVPRSSERQQPRGKVWGSVEIKSHRVCMDPACSKRTLKGCTCEEFCTFEGQRGVLMCKTCFLDKDRYAAAAEANWHGVDVLPRRSQMEW 522          
BLAST of mRNA_P-littoralis_Contig630.11.4 vs. uniprot
Match: A0A6H5JJP9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJP9_9PHAE)

HSP 1 Score: 444 bits (1142), Expect = 9.090e-139
Identity = 241/477 (50.52%), Postives = 314/477 (65.83%), Query Frame = 1
Query:    1 GNAPPRKLPNGEA-NPDYDTKHHIRLLEEVLNKAWAENVDVNQWLAYDEQMVKIVSTYAAALGRYMPEKLITHGIKIWALCDHKGYCLISSVDGGMQGASKLRQWFNCPLDRTTRQVLWVLLGASPVLSKKLDGSGVYIAMDSFFTNPMLFECLASHDIFAVGTCRSDRTAGAAAYLESLDRTLVERGDMNFCRAGEMAFVRWKDSKDVTLCSTIHIAQP----GEKECARNEG-IDHFTPLPYE----------------KRKKDREDDDDSTETTMQPEMRKDYCAYMGGVDTADQQNGSNAHYHKSCNNYWRRVM---IEQSLTNDFLCFRQWVPVLKCEAQRRVEDDVGDTAQKERLGCAINELGRRAKLERAK*DEVMARGLMGRCDIGSLNTGGRRQAPAKRPEDGRVWGSVRVKGARDCMNPDCTQRSSSGCSCAEC---KEGGDSGTLMCRTCFKKEASHTAAAVARVN 1347
            GNAPPR     +  NP++D+K HIR LE++LN AW EN+D N+WL YDEQM++ VST+A  L R  P++ ITHG+K++A+CD +GYC +SSVDGGM G  KLR WF+CPL RTTR VL VLLGA      K+DGSGV+IAM + FT+P LFECLASHDIFAVGTCRS+RT GA  YL+SLDR  VERG+M+F RAG +AFV+W DSK++ LCS+IHIAQP    GE +   ++G  DHF PLPY                  RK  +      +    QP MRKDY A MGGV+TAD+QNGS+ H H+S  N+WR VM    +Q+ TN F+ F+++V +L+ +A +R+E    +    E+L   + ELGR AK+ERA  DE+++  LM RC++G  N GGR       P+  +VWGS+ VK  R CM+P C  ++  GC+CAE    K+ GD G LMC+ CF     H  A  A+ N
Sbjct:  702 GNAPPRWTGEDKTPNPEFDSKWHIRELEDILNNAWTENMDFNEWLCYDEQMMRTVSTFAHYLMRDNPKEPITHGMKLFAICDIEGYCFVSSVDGGMNGDPKLRVWFDCPLGRTTRHVLHVLLGACKKFGDKIDGSGVHIAMSNNFTSPTLFECLASHDIFAVGTCRSNRTGGAVPYLQSLDRRPVERGEMHFARAGNVAFVQWLDSKEIILCSSIHIAQPHAAIGEPKKEDDDGGDDHFAPLPYRCFVCIPPSRPHPFMFSLRKAGQAG---KSLELQQPWMRKDYVANMGGVNTADRQNGSHTHDHESYTNHWRGVMEGKFKQTFTNIFVMFKKYVSLLEGQANKRIEGGGVELEVVEKLDRLLVELGRLAKMERAVWDEMLSTELMARCNVGRPNNGGRPAEVTGAPD--KVWGSISVKTQRKCMHPGCKSKTWKGCACAELCVGKQAGDRGVLMCQACFNNPVRHGRAGDAQRN 1173          
BLAST of mRNA_P-littoralis_Contig630.11.4 vs. uniprot
Match: A0A6H5LEE0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LEE0_9PHAE)

HSP 1 Score: 397 bits (1019), Expect = 2.730e-124
Identity = 254/617 (41.17%), Postives = 311/617 (50.41%), Query Frame = 1
Query:    4 NAPPRKLPNGEANPDYDTKHHIRLLEEVLNKAWAENVDVNQWLAYDEQMVKIVSTYAA--------------------------------------------------------------------------ALGRYMPEK---------------------------------------------------------LITHG-------------------IKIWALCDHKGYCLISSVDGGMQGASKLRQWFNCPLDRTTRQVLWVLLGASPVLSKKLDGSGVYIAMDSFFTNPMLFECLASHDIFAVGTCRSDRTAGAAAYLESLDRTLVERGDMNFCRAGEMAFVRWKDSKDVTLCSTIHIAQP--GEKECARNEGIDHFTPLPYEKRKKDREDDDDSTETTMQPEMRKDYCAYMGGVDTADQQNGSNAHYHKSCNNYWRRVM---IEQSLTNDFLCFRQWVPVLKCEAQRRVEDDVGDTAQKERLGCAINELGRRAKLERAK*DEVMARGLMGRCDIGSLNTGGRRQAPAKRPEDGRVWGSVRVKGARDCMNPDCTQRSSSGCSCAE-CKEGGDSGTLMCRTCFKKEASHTAAAVARVNGTTAKRRRKPMEW 1386
            NAP R LP+GE NPD D+K HIR LEE+LN AWA NV+ + WL+YDEQM+K VS Y++                                                                          +LGR +P +                                                         L T G                   +K+ A CD   YCL SSVDGGM+G  KLR + +CPL RTTR VL VLLG   VL +K+DGSGV+IAMD++FT+P LFECLASHDIFAVGTCR+DRTAGA AYLESL RT+  RGDMNFCR+G++A V+W DSKD+ L STIH+AQP  G++E     GIDHF PLP   R K R  +        QP MR DY   M GVD ADQQNGS+ H HKS  N+WRRV    +EQ+LTN FL FR+WV +L  E + +    +    + E L  A  EL   +K+ERA  DE MA  LM  C++   N GG+R A   +P D  VWGSV +K  R C+NP C   S  GCSC + C  G  +G LMC TC+K   SH  AA A  +  +  R R   EW
Sbjct:  206 NAPERLLPDGEENPDDDSKWHIRELEEILNTAWAANVECDNWLSYDEQMIKTVSKYSSKMDCLLDRTTRHVLHVLLGECGVLRQKIDGSGVFIAMDNYFTSPTLFECLASHDIFAVGTCRADRTAGADAYLESLGRTIPNRGDMNFCRSGQVAYVQWADSKDIFISTIHVAQPAKGKGGGRWNRPLQAFASIVSLNISLTTAGPFGLPVGGRSSVFYFMCASMKLLAACDITSYCLTSSVDGGMKGDPKLRPYMDCPLGRTTRHVLHVLLGECGVLRQKIDGSGVFIAMDNYFTSPTLFECLASHDIFAVGTCRADRTAGADAYLESLGRTIPNRGDMNFCRSGQVACVQWADSKDIFLISTIHVAQPAKGKEEAG---GIDHFKPLPLSLRAKGRNGE---PLDLQQPYMRMDYVLNMLGVDLADQQNGSHTHDHKSYTNFWRRVYDAKLEQALTNAFLIFRKWVELLIREVEAK--KPIAPGGELEELELASTELATLSKVERAVWDEQMATLLMAECNVARPNKGGKRPASDNKPAD-PVWGSVTLKSGRLCLNPTCKTTSMKGCSCKQFCTWGDKAGVLMCETCWKSPESHEQAAKAYWDSVSEGRNRTGFEW 813          
BLAST of mRNA_P-littoralis_Contig630.11.4 vs. uniprot
Match: A0A6H5KCK7_9PHAE (DDE_Tnp_1_7 domain-containing protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KCK7_9PHAE)

HSP 1 Score: 367 bits (941), Expect = 1.030e-117
Identity = 203/403 (50.37%), Postives = 261/403 (64.76%), Query Frame = 1
Query:  220 IKIWALCDHKGYCLISSVDGGMQGASKLRQWFNCPLDRTTRQVLWVLLGASPVLSKKLDGSGVYIAMDSFFTNPMLFECLASHDIFAVGTCRSDRTAGAAAYLESLDRTLVERGDMNFCRAGEMAFVRWKDSKDVTLCSTIHIAQP----GE-KECARNEGIDHFTPLPYE----------------KRKKDREDDDDSTETTMQPEMRKDYCAYMGGVDTADQQNGSNAHYHKSCNNYWRRVM---IEQSLTNDFLCFRQWVPVLKCEAQRRVEDDVGDTAQKERLGCAINELGRRAKLERAK*DEVMARGLMGRCDIGSLNTGGRRQAPAKRPEDGRVWGSVRVKGARDCMNPDCTQRSSSGCSCAEC---KEGGDSGTLMCRTCFKKEASHTAAAVARVN 1347
            +K++A+CD + YC +SSVDGGM G  KLR WF+CPL RTTR VL VLLGA      K+DGSGVYIAMD++FT+P LFECLASHDIFAVGTCRS+RT GA  YL+SLDR  VERG+M+F RAG +AFV+W DSK++ LCS+IHIAQP    GE K+   + G DHF PLPY                  RK  +      +    QP MRKDY A MGGV+TADQQN S+ H HKS  N+WRRV+    E+  TN  + F+++V +L+ +A +R++    +    E+L   + ELGR AK+ERA  DE+++  LM RC++G  N GGR  A    P+  +VWGS+ VK  R CM+P C  ++S GC+CAE    K+ GD G LMC+ CF     H  A  A+ N
Sbjct:    1 MKLFAICDIERYCFVSSVDGGMNGDPKLRVWFDCPLGRTTRHVLHVLLGACKKFGDKIDGSGVYIAMDNYFTSPTLFECLASHDIFAVGTCRSNRTGGAVPYLQSLDRRPVERGEMHFARAGNVAFVQWLDSKEIILCSSIHIAQPHAAIGEPKKEDSDGGDDHFAPLPYRCFVCPLPSRPHPFMFSLRKAGQAG---KSLELQQPWMRKDYVANMGGVETADQQNVSHTHDHKSYTNHWRRVIEGKFERRFTNIVVMFKKYVSLLEDQANKRIKGGGLELEVVEKLDRVLVELGRLAKMERAVWDEMLSTELMARCNVGRPNKGGRPAAVTGAPD--KVWGSISVKTQRKCMHPGCKSKTSKGCACAELCVGKQAGDRGVLMCQACFNNPVKHARAGDAQRN 398          
BLAST of mRNA_P-littoralis_Contig630.11.4 vs. uniprot
Match: A0A6H5KJJ0_9PHAE (DDE_Tnp_1_7 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJJ0_9PHAE)

HSP 1 Score: 356 bits (914), Expect = 3.890e-112
Identity = 214/470 (45.53%), Postives = 277/470 (58.94%), Query Frame = 1
Query:    1 GNAPPRKLPNGEANPDYDTKHHIRL---LEEVLNKAWAENVDVNQWLAYDEQMVKIVSTYAAALGRYMPEKLITHGIKIWALCDHKGYCLISSVDGGMQGASKLRQWFNCPLDRTTRQVLWVLLGASPVLSKKLDGSGVYIAMDSFFTNPMLFECLASHDIFAVGTCRSDRTAGAAAYLESLDRTLVERGDMNFCRAGEMAFVRWKDSKDVTLCSTIHIAQP--GEKECARNEGIDHFTPLPYEK--RKKDREDDDDSTETTMQPEMRKDYCAYMGGVDTADQQNGSNAHYHKSCNNYWRRVMIEQSLTNDFLCFRQWVPVLKCEAQRRVEDDVGDTAQKERLGCAINELGRRAKLERAK*DEVMARGLMGRCDIGSLNTGGRRQAPAKRPEDGRVWGSVRVKGARDCMNPDCTQRSSSGCSCAE-CKEGGDSGTLMCRTCFKKEASHTAAAVARVNGTTAKRRRKPMEW 1386
            G   PRK+   ++ P      H+R    LEE+LN AWA NV+ + WL+YDEQM+K VS Y++ +  Y P K I HG+K+ A CD  GYCL SSVDGGM+G  KLR + +CPL R TR VL VLLG   VL +K+DGSGV+IAMD++FT+P +FECLAS+DIFAVGTCR+DRTAGA AYLESL RT+  RGDMN CR+G++A V+W DSK + L STIH AQP  G++E     GIDH  PLP  +   KK      +  E     E+     A +  V+ A           + CN       + +  T + L       + + EA++     +    + E L  A  EL   +K+ERA  DE MA  LM +C++   N GGRR A   +P D  VWGSV +K  R C+NP C  RS+ GCSC + C  G +SG  MC TC+K   SH  AA A  +G +  R RK  EW
Sbjct:   85 GTGAPRKVE--DSPPSTAPLFHVRAVWELEEILNTAWAANVECDNWLSYDEQMIKTVSKYSSKVSFYCPAKPIKHGMKLLAACDITGYCLTSSVDGGMKGDPKLRPYMDCPLGRATRHVLHVLLGECGVLRQKIDGSGVFIAMDNYFTSPTVFECLASYDIFAVGTCRADRTAGADAYLESLGRTIPNRGDMNLCRSGQVACVQWADSKGIFLISTIHFAQPAKGKEEAG---GIDHIKPLPLSEVEAKKPIAPGGELEEL----ELASTELATLSKVERAVWDEQKATLLMEKCN-------VARPNTVELL-------IREVEAKK----PIAPGGELEELELASTELATLSKVERAVWDEQMATLLMAKCNVARPNKGGRRPASDNKPAD-PVWGSVTLKSGRLCLNPTCKTRSTKGCSCEQFCTRGDESGVFMCETCWKSPESHEQAAKAYWDGLSKGRNRKGFEW 526          
BLAST of mRNA_P-littoralis_Contig630.11.4 vs. uniprot
Match: A0A6H5JW40_9PHAE (HTH La-type RNA-binding domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JW40_9PHAE)

HSP 1 Score: 369 bits (946), Expect = 5.350e-110
Identity = 204/379 (53.83%), Postives = 248/379 (65.44%), Query Frame = 1
Query:    1 GNAPPRKLPNGEA-NPDYDTKHHIRLLEEVLNKAWAENVDVNQWLAYDEQMVKIVSTYAAALGRYMPEKLITHGIKIWALCDHKGYCLISSVDGGMQGASKLRQWFNCPLDRTTRQVLWVLLGASPVLSKKLDGSGVYIAMDSFFTNPMLFECLASHDIFAVGTCRSDRTAGAAAYLESLDRTLVERGDMNFCRAGEMAFVRWKDSKDVTLCSTIHIAQP----GE-KECARNEGIDHFTPLPYE----------------KRKKDREDDDDSTETTMQPEMRKDYCAYMGGVDTADQQNGSNAHYHKSCNNYWRRVM---IEQSLTNDFLCFRQ--------WVPVLKCEAQRRV--EDDVGDTAQKERLGCAINELG 1032
            GNAPPR     +  NP++D+K HIR LE++LN AW EN+D NQWL YDEQMVK VST+A  L R+ P+K ITHG+K++A+CD +GYC +SSVDGGM G  KLR WF+CPL RTTR VL VLLGA      K+DGSG YIAMD++F +P LFECLASHDIFAVGTCRS+RT GA  YL+SLDR  VERG+M+F RAG +AFV+W DSK++ LCS+IHIAQP    GE K+   + G DHF PLPY                  RK  +      +    QP MRKDY A MGGVDTADQQNGS+ H HKS  N+WRRVM    EQ+ TN F+ F++        W  +L  E   R    + V   A +E  G  + E G
Sbjct:  756 GNAPPRWAGEDKTPNPEFDSKWHIRELEDILNNAWTENMDFNQWLCYDEQMVKTVSTFAHYLMRHSPKKPITHGMKLFAICDIEGYCFVSSVDGGMNGDPKLRVWFDCPLGRTTRHVLHVLLGACKKFGDKIDGSGAYIAMDNYFKSPTLFECLASHDIFAVGTCRSNRTGGAVPYLQSLDRRPVERGEMHFARAGNVAFVQWLDSKEIILCSSIHIAQPHAAIGEPKKEDSDGGDDHFAPLPYRCFVCPLPSRPHPFMFSLRKAGQAG---KSLELQQPWMRKDYVANMGGVDTADQQNGSHTHDHKSYTNHWRRVMEGKFEQTFTNIFVMFKKLGKMERAVWDEMLSTELMARPLNTETVAAPASEEGSGPVVAEDG 1131          
BLAST of mRNA_P-littoralis_Contig630.11.4 vs. uniprot
Match: A0A6H5KCC7_9PHAE (DDE_Tnp_1_7 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KCC7_9PHAE)

HSP 1 Score: 301 bits (770), Expect = 1.030e-91
Identity = 150/238 (63.03%), Postives = 177/238 (74.37%), Query Frame = 1
Query:    4 NAPPRKLPNGEANPDYDTKHHIRLLEEVLNKAWAENVDVNQWLAYDEQMVKIVSTYAAALGRYMPEKLITHGIKIWALCDHKGYCLISSVDGGMQGASKLRQWFNCPLDRTTRQVLWVLLGASPVLSKKLDGSGVYIAMDSFFTNPMLFECLASHDIFAVGTCRSDRTAGAAAYLESLDRTLVERGDMNFCRAGEMAFVRWKDSKDVTLCSTIHIAQP--GEKECARNEGIDHFTPLP 711
            NAP R LP+GE NPDYD+K HIR LEE+LN AWA NV+   WL+YDEQM+K VS Y               G+K+ A CD  GYCL SSVDGGM+G  KLR + +CPL RTTR VL VLLG   VL +K+DGSGV+IAMD++FT+P LFECLASHDIFAVGTCR+DRTAGA AYLESL RT+  RGDMNFCR+G++A V+W DS D+ L STIH+AQP  G++E     GIDHF PLP
Sbjct:   86 NAPERLLPDGEENPDYDSKRHIRELEEILNTAWATNVECGNWLSYDEQMIKTVSKYE-------------QGMKLLAACDITGYCLTSSVDGGMKGDPKLRPYMDCPLGRTTRHVLHVLLGECGVLRQKIDGSGVFIAMDNYFTSPTLFECLASHDIFAVGTCRADRTAGADAYLESLGRTIPNRGDMNFCRSGQVACVQWADSNDIFLISTIHVAQPVKGKEEAG---GIDHFKPLP 307          
BLAST of mRNA_P-littoralis_Contig630.11.4 vs. uniprot
Match: A0A6H5JVE2_9PHAE (DDE_Tnp_1_7 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JVE2_9PHAE)

HSP 1 Score: 283 bits (724), Expect = 4.420e-87
Identity = 146/269 (54.28%), Postives = 180/269 (66.91%), Query Frame = 1
Query:    4 NAPPRKLPNGEANPDYDTKHHIRLLEEVLNKAWAENVDVNQWLAYDEQMVKIVSTYAAALGRYMPEKLITHGIKIWALCDHKGYCLISSVDGGMQGASKLRQWFNCPLDRTTRQVLWVLLGASPVLSKKLDGSGVYIAMDSFFTNPMLFECLASHDIFAVGTCRSDRTAGAAAYLESLDRTLVERGDMNFCRAGEMAFVRWKDSKDVTLCSTIHIAQPGEKECARNEGIDHFTPLPYEKRKKDREDDDDSTETTMQPEMRKDYCAYMGG 810
            NAPPR+LP GE NP+YD K HIR LE++LN+AW   VD+ QW+ YDEQMVK VST++  L  + P K ITHG+K +A  D  GYCLI+S+DG  +G   L    +CPL +TTR VL VLL     L  KL GSGV+IAM ++FT+P LF CLASHDIFAV TCRS RT GA  Y+ESL  T+  RGDM FCR+GEMAFV+W+DSK++ L ST+HI + G        GI+HF P+    + K R       +   QP MR DY  YMGG
Sbjct:   39 NAPPRQLPTGEDNPEYDLKWHIRDLEKILNRAWY--VDLGQWMCYDEQMVKTVSTFSKGLAHFNPAKPITHGMKQYAASDRNGYCLINSIDGSFKGDPSLGPLEDCPLGKTTRHVLHVLLEECETLRGKLVGSGVFIAMANYFTSPTLFACLASHDIFAVATCRSPRTCGALPYMESLGHTIPNRGDMTFCRSGEMAFVQWRDSKEILLYSTVHIGETG----GEGGGINHFKPVLLALKGKGRAGKHKEHD---QPVMRMDYVKYMGG 298          
BLAST of mRNA_P-littoralis_Contig630.11.4 vs. uniprot
Match: A0A6H5KH92_9PHAE (DDE_Tnp_1_7 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KH92_9PHAE)

HSP 1 Score: 272 bits (695), Expect = 7.240e-82
Identity = 134/236 (56.78%), Postives = 166/236 (70.34%), Query Frame = 1
Query:    4 NAPPRKLPNGEANPDYDTKHHIRLLEEVLNKAWAENVDVNQWLAYDEQMVKIVSTYAAALGRYMPEKLITHGIKIWALCDHKGYCLISSVDGGMQGASKLRQWFNCPLDRTTRQVLWVLLGASPVLSKKLDGSGVYIAMDSFFTNPMLFECLASHDIFAVGTCRSDRTAGAAAYLESLDRTLVERGDMNFCRAGEMAFVRWKDSKDVTLCSTIHIAQPGEKECARNEGIDHFTPLP 711
            NAPPR+LP GE NP YD+K HIR LE++LN+A    VD+ QWL YDEQ++K VST++  L  + P K ITHG+K +A  D  GYCLI+S+DG   G   LR   +CPL +TTR VL VLL     L  KL GS V+IAMD++FT+P LF CLASHDIFAVGT RS RT GA  Y+ESL RT     DM FCR+ EMAFV+W+DSK++ LCST+HI + GE+      GI+HF P+P
Sbjct:   39 NAPPRQLPTGEDNPKYDSKWHIRDLEKILNRACPWXVDLGQWLCYDEQVLKTVSTFSKGLAHFNPAKPITHGMKQYAASDRNGYCLINSIDGSFTGDPSLRPLEDCPLGKTTRHVLHVLLEECETLRGKLVGSSVFIAMDNYFTSPTLFTCLASHDIFAVGTWRSPRTCGALPYMESLGRTTPNPDDMTFCRSVEMAFVQWRDSKEILLCSTVHIGETGEE----GGGINHFKPVP 270          
BLAST of mRNA_P-littoralis_Contig630.11.4 vs. uniprot
Match: A0A6H5KVX6_9PHAE (DDE_Tnp_1_7 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KVX6_9PHAE)

HSP 1 Score: 268 bits (686), Expect = 2.740e-80
Identity = 130/203 (64.04%), Postives = 156/203 (76.85%), Query Frame = 1
Query:    4 NAPPRKLPNGEANPDYDTKHHIRLLEEVLNKAWAENVDVNQWLAYDEQMVKIVSTYAAALGRYMPEKLITHGIKIWALCDHKGYCLISSVDGGMQGASKLRQWFNCPLDRTTRQVLWVLLGASPVLSKKLDGSGVYIAMDSFFTNPMLFECLASHDIFAVGTCRSDRTAGAAAYLESLDRTLVERGDMNFCRAGEMAFVRWKD 612
            NAP R LP GE NPDYD+K     LEE+LN AWA NV+ + WL+YDEQM+K VS Y++ +  Y P K I HG+K+ A CD  GYCL SSVDGGM+G  KLR + +CPLDRTTR VL VLLG   VL +K+DGSGV+IAMD++FT+P L ECLASHDIFAVGTCR+D TAGA  YLESL RT+  RGDMNFCR+G++A V+W D
Sbjct:  186 NAPKRLLPAGEENPDYDSKE----LEEMLNTAWATNVECDNWLSYDEQMIKTVSKYSSKVSFYCPAKPIKHGMKLLAACDITGYCLTSSVDGGMKGDPKLRPYMDCPLDRTTRHVLHVLLGECGVLRQKIDGSGVFIAMDNYFTSPTLLECLASHDIFAVGTCRADLTAGADTYLESLGRTIPNRGDMNFCRSGQVACVQWAD 384          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig630.11.4 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KMF5_9PHAE8.710e-14649.89DDE_Tnp_1_7 domain-containing protein n=1 Tax=Ecto... [more]
A0A6H5JJP9_9PHAE9.090e-13950.52Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5LEE0_9PHAE2.730e-12441.17Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KCK7_9PHAE1.030e-11750.37DDE_Tnp_1_7 domain-containing protein n=3 Tax=Ecto... [more]
A0A6H5KJJ0_9PHAE3.890e-11245.53DDE_Tnp_1_7 domain-containing protein n=1 Tax=Ecto... [more]
A0A6H5JW40_9PHAE5.350e-11053.83HTH La-type RNA-binding domain-containing protein ... [more]
A0A6H5KCC7_9PHAE1.030e-9163.03DDE_Tnp_1_7 domain-containing protein n=1 Tax=Ecto... [more]
A0A6H5JVE2_9PHAE4.420e-8754.28DDE_Tnp_1_7 domain-containing protein n=1 Tax=Ecto... [more]
A0A6H5KH92_9PHAE7.240e-8256.78DDE_Tnp_1_7 domain-containing protein n=1 Tax=Ecto... [more]
A0A6H5KVX6_9PHAE2.740e-8064.04DDE_Tnp_1_7 domain-containing protein n=1 Tax=Ecto... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig630contigP-littoralis_Contig630:144876..148019 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog8128.ENSONIP00000004133
PFAMsDDE_Tnp_1_7
Model size1954
Max annot lvl33208|Metazoa
Hectar predicted targeting categoryother localisation
Exons4
Evalue4.54e-16
EggNOG OGs2CXJS@1|root,2RY1K@2759|Eukaryota,39VGM@33154|Opisthokonta,3BJCI@33208|Metazoa,3CWQ6@33213|Bilateria
DescriptionPiggyBac transposable element-derived protein
Cds size915
COG categoryS
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig630.11.4prot_P-littoralis_Contig630.11.4Pylaiella littoralis U1_48polypeptideP-littoralis_Contig630 145260..147127 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791317.1508439-UTR-P-littoralis_Contig630:144875..1449461680791317.1508439-UTR-P-littoralis_Contig630:144875..144946Pylaiella littoralis U1_48UTRP-littoralis_Contig630 144876..144946 +
1680791317.1737247-UTR-P-littoralis_Contig630:145183..1452591680791317.1737247-UTR-P-littoralis_Contig630:145183..145259Pylaiella littoralis U1_48UTRP-littoralis_Contig630 145184..145259 +
1680791317.217841-UTR-P-littoralis_Contig630:147127..1480191680791317.217841-UTR-P-littoralis_Contig630:147127..148019Pylaiella littoralis U1_48UTRP-littoralis_Contig630 147128..148019 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791317.1855235-CDS-P-littoralis_Contig630:145259..1453291680791317.1855235-CDS-P-littoralis_Contig630:145259..145329Pylaiella littoralis U1_48CDSP-littoralis_Contig630 145260..145329 +
1680791317.1962557-CDS-P-littoralis_Contig630:145960..1464591680791317.1962557-CDS-P-littoralis_Contig630:145960..146459Pylaiella littoralis U1_48CDSP-littoralis_Contig630 145961..146459 +
1680791317.2070916-CDS-P-littoralis_Contig630:146781..1471271680791317.2070916-CDS-P-littoralis_Contig630:146781..147127Pylaiella littoralis U1_48CDSP-littoralis_Contig630 146782..147127 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig630.11.4

>prot_P-littoralis_Contig630.11.4 ID=prot_P-littoralis_Contig630.11.4|Name=mRNA_P-littoralis_Contig630.11.4|organism=Pylaiella littoralis U1_48|type=polypeptide|length=305bp
MVKIVSTYAAALGRYMPEKLITHGIKIWALCDHKGYCLISSVDGGMQGAS
KLRQWFNCPLDRTTRQVLWVLLGASPVLSKKLDGSGVYIAMDSFFTNPML
FECLASHDIFAVGTCRSDRTAGAAAYLESLDRTLVERGDMNFCRAGEMAF
VRWKDSKDVTLCSTIHIAQPGEKECARNEGIDHFTPLPYEKRKKDREDDD
DSTETTMQPEMRKDYCAYMGGVDTADQQNGSNAHYHKSCNNYWRRVMIEQ
SLTNDFLCFRQWVPVLKCEAQRRVEDDVGDTAQKERLGCAINELGRRAKL
ERAK*
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mRNA from alignment at P-littoralis_Contig630:144876..148019+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig630.11.4 ID=mRNA_P-littoralis_Contig630.11.4|Name=mRNA_P-littoralis_Contig630.11.4|organism=Pylaiella littoralis U1_48|type=mRNA|length=3144bp|location=Sequence derived from alignment at P-littoralis_Contig630:144876..148019+ (Pylaiella littoralis U1_48)
GGTAATGCGCCCCCGCGGAAATTGCCAAACGGAGAGGCCAACCCTGACTA CGACACGAAACATCACATCAGGCGAGAGAGCCACCAAATCGCCGCATGCA TGCGAAGGGCACCCTGTAGTATTGTTTCAGTGGTGATTTTTGAATCGAAA TAATCCTTCCACAATTTTGGTGGCACGCATATCCGGACTTTTGTTGTCGT TAGGTTGTCGTTGTGGATCGATACATACCGCACTGCAGGACACAAAATAG CATATTTTGCAGTGATTTCTGTTTTTTCTTCGTCACTCTTTCGCACCTTG GCCGGCAGGCTACTCGAGGAGGTCTTGAACAAGGCATGGGCGGAAAACGT CGACGTCAACCAGTGGCTCGCGTACGATGAACAAATGGTGAAGATTGTCT CCACGTATGCTGCCGCCCTCGGCAGGTACATGCCTGAGAAACTCATCACT CATGGTGAGTCACTGCGTGACGGGACGTTCGTGTTCTTTTCAGCACTGGA TCGGGGCGGTGTTTGTTTTTTCTAGCCCCGGACTTTTGTTTGTTTATAGC GTCTGTATTTGTTCTCTGTTTTTCCCTTCTTACCATCAAATACGAAATGT GTGTGACTTTGTTTGTGTCGGAAAGGGTATGTATCTATAAATTTTTGGGG CCGCGTATTTTTTTTGAGGCGAAAAGCGGCCGTAATTTTCTCGTTTTCAA GGCGAGACGTTTTTTTCCGTTTTTTTTCACGCGGCTGGCCTTGCAGACAG TTCGTGTTTTCTAACGGCACGACAGCAGTAATGTATTTCTCGGTTCATCA ATAGTCCATACCTCACAAAACAAATACTCCGTATGGCAGTCATCCACACG TAATACACACAGGATCGGTTAGATCACATGGAGATATGATTATGGTATAT TCGGTGCAGATGATATGAATAGTTTTATGAACCCGCTATCTATATACTGT AACTAGACGATCTCGTCCTATGTTCAATTTCTAATGTACACAAAGCAGGT GACCTACACCATGATCTGTCCCAAGTAATCTTGCCCTCGCTTTTGCTGTT TCTGTTATCCGGTGAGTTGTTTTCGAAACAAACAGGCATCAAGATATGGG CTCTTTGTGACCACAAGGGATACTGCTTGATCAGCAGCGTCGACGGTGGG ATGCAAGGGGCCTCGAAGCTGCGCCAGTGGTTCAACTGCCCGCTGGACCG GACGACGCGCCAGGTGCTTTGGGTCTTGTTGGGTGCATCCCCTGTGCTGA GCAAGAAACTGGATGGCTCCGGCGTTTACATCGCTATGGACAGCTTCTTC ACGAACCCGATGCTGTTCGAGTGCCTCGCTAGCCACGACATCTTCGCCGT GGGTACCTGCCGCAGTGACAGGACCGCTGGTGCGGCTGCTTACTTGGAGA GCCTCGACCGCACACTCGTAGAGCGTGGAGACATGAACTTCTGTCGAGCT GGCGAAATGGCGTTCGTACGATGGAAGGACTCGAAGGACGTTACACTCTG TAGCACCATTCACATCGCACAGCCGGGCGAGAAAGAGTGCGCGCGAAACG AGGGGATCGACCACTTTACTCCCTTACCGTACGAGTGAGTATCTCGTTTT TCATGCTTATCCTACTACCCTGTATACTTGAAAATCGCAGAGATTCATGT GCCGTACCCCCCCCCCCCGCGACGCTTGGAACGAACCCGCGTGAATTTGT TTTGTTTTCCCCTCTTATTTGTATGTATACATACCTTTCAATGCCCGCGG GTGTTGCGCTCATGTACTGGCTAGTGTTTTTCCGTCGTGCTTTATCTTGT GTGACGAACGGGTTCGATGGGTCGTAAGACAGTGAGCTGTGGCTGGAGCA ACATCTAATCGGTACAGTATTCTCTCTCCGCTGTTCATGTAATTGCTTTT ACACAGGAAGCGCAAAAAAGACCGGGAGGATGACGACGATTCGACGGAGA CTACGATGCAACCAGAGATGAGGAAGGACTATTGCGCGTACATGGGGGGT GTAGACACGGCTGACCAGCAGAACGGGTCGAACGCGCATTACCATAAGTC CTGCAACAACTACTGGAGGCGCGTGATGATCGAACAATCCCTGACTAATG ATTTTTTGTGTTTCAGGCAGTGGGTGCCCGTGCTAAAGTGTGAAGCGCAG AGAAGGGTAGAGGACGATGTCGGGGACACGGCGCAAAAGGAAAGGTTGGG GTGTGCAATCAATGAGCTAGGCAGGCGGGCCAAACTAGAGCGGGCTAAGT GAGATGAGGTTATGGCGCGAGGTTTGATGGGAAGGTGCGACATCGGCAGC CTTAACACTGGCGGGAGACGGCAGGCGCCAGCAAAGCGACCCGAAGACGG TCGTGTTTGGGGTAGCGTCAGAGTGAAGGGTGCGCGTGATTGTATGAACC CTGACTGCACGCAGAGGTCTTCGAGTGGGTGCAGTTGCGCAGAGTGTAAA GAAGGAGGTGATTCGGGGACTTTGATGTGTAGGACATGCTTTAAAAAGGA GGCTTCACACACGGCCGCGGCAGTAGCTCGGGTGAACGGCACAACGGCGA AGCGTAGAAGAAAGCCCATGGAGTGGCTCAAGAAGTGAAAACAAGTACTT CGAAGTATTATTTTTCCGTTGACGTTGATTTCGTCTGAGAAGCCATTTAT GTGGAGGGCTTGACTACAAGAAATGGAACAAATTGTAACGAAACGTTTCT TGGCGCAACGCAAGTTCGACTGGCAGAAAATACGCTCGTTTCTCTCTGTG TAAAGAATAGAAACGTAATGCTGGCTCCGCTTGCCATTGACTACAGCGTG ATTGCACGACGTGGGGGGGGGCAAGCCAGGGGTGGCGGGCGCATGGGCCT GTGTTCAGGTTGGGTGTGCATGCGACCTTTTTATTTGGATGTTTGATCTG TGCTTCGTCAGAGAATATATTTCGCAGGGGAGTAACTGTTGTACTTCGAA GTAGCTTTTTTCGGGCGTTGTTATGTCCGTGTACACTAATTTTTGGGGGA ATGCTTGATTCGTTGGTTTGTGTCGCATGCATTGCTCAGTCAGTCGCACA CCAATATCAGCCCCCTCGACATTTTTGGCAAATTTTGGCGTGTATTCGTC GTGTATCTCATTCCTCGCGTTGACGCCTGGATAAAACTGTTGAC
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Coding sequence (CDS) from alignment at P-littoralis_Contig630:144876..148019+

>mRNA_P-littoralis_Contig630.11.4 ID=mRNA_P-littoralis_Contig630.11.4|Name=mRNA_P-littoralis_Contig630.11.4|organism=Pylaiella littoralis U1_48|type=CDS|length=915bp|location=Sequence derived from alignment at P-littoralis_Contig630:144876..148019+ (Pylaiella littoralis U1_48)
ATGGTGAAGATTGTCTCCACGTATGCTGCCGCCCTCGGCAGGTACATGCC
TGAGAAACTCATCACTCATGGCATCAAGATATGGGCTCTTTGTGACCACA
AGGGATACTGCTTGATCAGCAGCGTCGACGGTGGGATGCAAGGGGCCTCG
AAGCTGCGCCAGTGGTTCAACTGCCCGCTGGACCGGACGACGCGCCAGGT
GCTTTGGGTCTTGTTGGGTGCATCCCCTGTGCTGAGCAAGAAACTGGATG
GCTCCGGCGTTTACATCGCTATGGACAGCTTCTTCACGAACCCGATGCTG
TTCGAGTGCCTCGCTAGCCACGACATCTTCGCCGTGGGTACCTGCCGCAG
TGACAGGACCGCTGGTGCGGCTGCTTACTTGGAGAGCCTCGACCGCACAC
TCGTAGAGCGTGGAGACATGAACTTCTGTCGAGCTGGCGAAATGGCGTTC
GTACGATGGAAGGACTCGAAGGACGTTACACTCTGTAGCACCATTCACAT
CGCACAGCCGGGCGAGAAAGAGTGCGCGCGAAACGAGGGGATCGACCACT
TTACTCCCTTACCGTACGAGAAGCGCAAAAAAGACCGGGAGGATGACGAC
GATTCGACGGAGACTACGATGCAACCAGAGATGAGGAAGGACTATTGCGC
GTACATGGGGGGTGTAGACACGGCTGACCAGCAGAACGGGTCGAACGCGC
ATTACCATAAGTCCTGCAACAACTACTGGAGGCGCGTGATGATCGAACAA
TCCCTGACTAATGATTTTTTGTGTTTCAGGCAGTGGGTGCCCGTGCTAAA
GTGTGAAGCGCAGAGAAGGGTAGAGGACGATGTCGGGGACACGGCGCAAA
AGGAAAGGTTGGGGTGTGCAATCAATGAGCTAGGCAGGCGGGCCAAACTA
GAGCGGGCTAAGTGA
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