|
|
Homology
BLAST of mRNA_P-littoralis_Contig63.87.2 vs. uniprot
Match: D7FI21_ECTSI (UBC core domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FI21_ECTSI) HSP 1 Score: 343 bits (880), Expect = 9.500e-114 Identity = 169/178 (94.94%), Postives = 174/178 (97.75%), Query Frame = 2
Query: 275 SKRKMSLLSSFENISPQVISRVGREIQDLERNPPDGIRFLPQEEDTIAEIHAEIKGPVGTPYDGGSFHIKLVLSNDFPHSPPRGFFLTKIYHPNVAPNGDICVNTLKRDWTAEVTLTHVLQVIRCLLIVPFPESSLNDEAGRMFMESYTEYERRVKVWVNVHASKSLSAGVEGSGELT 808
+KRKMSLLSSFENISPQVISRVGREIQDL+RNPPDGIRFLPQEEDTIAEIHAEIKGPVGTPYDGGSFHIKLVLSNDFPHSPPRGFFLTKIYHPNVAPNGDICVNTLKRDWTAEVTLTHVLQVIRCLLIVPFPESSLNDEAGR+FMESYTEYERRVKVWVNVHASKSLS+ +G GE T
Sbjct: 3 NKRKMSLLSSFENISPQVISRVGREIQDLQRNPPDGIRFLPQEEDTIAEIHAEIKGPVGTPYDGGSFHIKLVLSNDFPHSPPRGFFLTKIYHPNVAPNGDICVNTLKRDWTAEVTLTHVLQVIRCLLIVPFPESSLNDEAGRLFMESYTEYERRVKVWVNVHASKSLSSAPDG-GEAT 179
BLAST of mRNA_P-littoralis_Contig63.87.2 vs. uniprot
Match: A0A7S2GD37_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2GD37_9STRA) HSP 1 Score: 236 bits (603), Expect = 1.340e-72 Identity = 110/162 (67.90%), Postives = 133/162 (82.10%), Query Frame = 2
Query: 278 KRKMSLLSSFENISPQVISRVGREIQDLERNPPDGIRFLPQEEDTIAEIHAEIKGPVGTPYDGGSFHIKLVLSNDFPHSPPRGFFLTKIYHPNVAPNGDICVNTLKRDWTAEVTLTHVLQVIRCLLIVPFPESSLNDEAGRMFMESYTEYERRVKVWVNVHA 763
KRK++ S EN+SPQVI RV REI L ++PPDGIR++ E++ I+EIH ++ GP GTPY GG F +KLVLS DFP SPPRGFF TKIYHPNV+ G+ICVNTLKRDWTA+V++ H+LQVIRCLLIVPFPESSLNDEAG++FMESYTEY R ++W VHA
Sbjct: 8 KRKLN--SGVENLSPQVIVRVSREIAALAKSPPDGIRYVAMEDEKISEIHVKMAGPDGTPYQGGIFRVKLVLSYDFPQSPPRGFFQTKIYHPNVSTKGEICVNTLKRDWTADVSIVHILQVIRCLLIVPFPESSLNDEAGKLFMESYTEYAERARLWTRVHA 167
BLAST of mRNA_P-littoralis_Contig63.87.2 vs. uniprot
Match: A0A8K1CMN2_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CMN2_PYTOL) HSP 1 Score: 236 bits (603), Expect = 2.240e-72 Identity = 104/154 (67.53%), Postives = 129/154 (83.77%), Query Frame = 2
Query: 308 ENISPQVISRVGREIQDLERNPPDGIRFLPQEEDTIAEIHAEIKGPVGTPYDGGSFHIKLVLSNDFPHSPPRGFFLTKIYHPNVAPNGDICVNTLKRDWTAEVTLTHVLQVIRCLLIVPFPESSLNDEAGRMFMESYTEYERRVKVWVNVHASK 769
EN++PQVI RV +EI+ L NPP+GIR++PQE++ + EIH EI GP TPYDGG F +KL LS+ FPH+PP+G FLTKI+HPN+A NG+ICVNTLK+DWT+ + + HVLQVIRCLLIVPFPESSLNDEAGR+FMESY EY RR ++W N+HA K
Sbjct: 6 ENLAPQVIQRVAKEIRQLVTNPPNGIRYVPQEDEVLTEIHVEIAGPENTPYDGGYFQVKLTLSDGFPHAPPKGVFLTKIFHPNIATNGEICVNTLKKDWTSTLGIAHVLQVIRCLLIVPFPESSLNDEAGRLFMESYDEYARRARLWTNIHAPK 159
BLAST of mRNA_P-littoralis_Contig63.87.2 vs. uniprot
Match: A0A4D9CPA5_9STRA (UBC core domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CPA5_9STRA) HSP 1 Score: 233 bits (595), Expect = 2.580e-71 Identity = 111/165 (67.27%), Postives = 131/165 (79.39%), Query Frame = 2
Query: 296 LSSFENISPQVISRVGREIQDLERNPPDGIRFLPQEEDTIAEIHAEIKGPVGTPYDGGSFHIKLVLSNDFPHSPPRGFFLTKIYHPNVAPNGDICVNTLKRDWTAEVTLTHVLQVIRCLLIVPFPESSLNDEAGRMFMESYTEYERRVKVWVNVHASKSLSAGVE 790
+SS+EN+SPQVI+R+ REIQDL R P GIR D IAEIHAEI GP TPY G+FH+KLVLS DFP+SPPRG+FLT+IYHPNV+ GDICVNTLKRDW+ VTL HVLQVIRCLLIVPFPESSLNDEAG+ FMESY +Y RR ++ +VHA + ++ E
Sbjct: 1 MSSYENLSPQVITRIAREIQDLVRKPSPGIRLAQNNCDNIAEIHAEIDGPEDTPYVDGTFHVKLVLSQDFPNSPPRGYFLTRIYHPNVSSAGDICVNTLKRDWSPSVTLAHVLQVIRCLLIVPFPESSLNDEAGKQFMESYADYARRARLLTSVHARRKVNGSSE 165
BLAST of mRNA_P-littoralis_Contig63.87.2 vs. uniprot
Match: A0A836CAV4_9STRA (Ubiquitin-conjugating enzyme E2S n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CAV4_9STRA) HSP 1 Score: 231 bits (588), Expect = 1.090e-70 Identity = 105/154 (68.18%), Postives = 127/154 (82.47%), Query Frame = 2
Query: 308 ENISPQVISRVGREIQDLERNPPDGIRFLPQEEDTIAEIHAEIKGPVGTPYDGGSFHIKLVLSNDFPHSPPRGFFLTKIYHPNVAPNGDICVNTLKRDWTAEVTLTHVLQVIRCLLIVPFPESSLNDEAGRMFMESYTEYERRVKVWVNVHASK 769
EN SPQ ISR+ RE+ +L R P+G F+P E D IAEI +I+GPVGTPY+GGSF +KLVLS+D+P SPPRGFFLT+IYHPNV P GDICVNTLK+DWT VT+ H+ QVIRCLLIVPFPESSLNDEAG++FMESY E+ RR ++ +VHA+K
Sbjct: 7 ENFSPQTISRLHREVGELARASPEGCTFVPSETDNIAEIMCDIEGPVGTPYEGGSFRVKLVLSSDYPSSPPRGFFLTRIYHPNVGPTGDICVNTLKKDWTQAVTMAHIFQVIRCLLIVPFPESSLNDEAGKLFMESYEEFSRRARLMTSVHAAK 160
BLAST of mRNA_P-littoralis_Contig63.87.2 vs. uniprot
Match: A0A425CV13_9STRA (UBC core domain-containing protein n=5 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A425CV13_9STRA) HSP 1 Score: 228 bits (581), Expect = 1.230e-69 Identity = 103/164 (62.80%), Postives = 133/164 (81.10%), Query Frame = 2
Query: 278 KRKMSLLSSFENISPQVISRVGREIQDLERNPPDGIRFLPQEEDTIAEIHAEIKGPVGTPYDGGSFHIKLVLSNDFPHSPPRGFFLTKIYHPNVAPNGDICVNTLKRDWTAEVTLTHVLQVIRCLLIVPFPESSLNDEAGRMFMESYTEYERRVKVWVNVHASK 769
K+ ++S+ EN SPQ+I RV +EI+ L NPP GIR+LPQ+++++AEIH E+ GP TPY GG F +KL+L+ FP PP+G FLTKI+HPNVA NGDICVNTLKRDW+A++ L+HVLQVIRCLLIVPFPESSLNDEAG++FME Y EY +R ++ ++HASK
Sbjct: 2 KKAACMMSAHENFSPQIIQRVAKEIRQLATNPPSGIRYLPQDDESLAEIHVELVGPEDTPYAGGFFEMKLLLTEGFPTVPPKGHFLTKIFHPNVASNGDICVNTLKRDWSADLDLSHVLQVIRCLLIVPFPESSLNDEAGKLFMECYDEYAQRARILTSIHASK 165
BLAST of mRNA_P-littoralis_Contig63.87.2 vs. uniprot
Match: K3WZA4_GLOUD (UBC core domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WZA4_GLOUD) HSP 1 Score: 230 bits (586), Expect = 1.310e-69 Identity = 104/154 (67.53%), Postives = 127/154 (82.47%), Query Frame = 2
Query: 308 ENISPQVISRVGREIQDLERNPPDGIRFLPQEEDTIAEIHAEIKGPVGTPYDGGSFHIKLVLSNDFPHSPPRGFFLTKIYHPNVAPNGDICVNTLKRDWTAEVTLTHVLQVIRCLLIVPFPESSLNDEAGRMFMESYTEYERRVKVWVNVHASK 769
EN+ PQVI RV REI+ L P DGIR+LPQ+++ + EI AEI+GP TPY+GG F IKLVLS+ FP +PPRG FLTKI+HPN+A NGD+CVNTLK+DW+ ++ + HVLQVIRCLLIVPFPESSLNDEAGR+FMESY EY RR ++W N+HA K
Sbjct: 5 ENLPPQVIQRVAREIRQLVVTPLDGIRYLPQDDEQLTEIRAEIQGPENTPYEGGFFRIKLVLSDGFPQTPPRGVFLTKIFHPNIATNGDVCVNTLKKDWSPQLGIAHVLQVIRCLLIVPFPESSLNDEAGRLFMESYEEYARRARIWTNIHAPK 158
BLAST of mRNA_P-littoralis_Contig63.87.2 vs. uniprot
Match: A0A067BZY2_SAPPC (UBC core domain-containing protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067BZY2_SAPPC) HSP 1 Score: 226 bits (577), Expect = 2.810e-69 Identity = 102/159 (64.15%), Postives = 133/159 (83.65%), Query Frame = 2
Query: 296 LSSFENISPQVISRVGREIQDLERNPPDGIRFLPQEEDTIAEIHAEIKGPVGTPYDGGSFHIKLVLSNDFPHSPPRGFFLTKIYHPNVAPNGDICVNTLKRDWTAEVTLTHVLQVIRCLLIVPFPESSLNDEAGRMFMESYTEYERRVKVWVNVHASKS 772
+++ EN SPQ++ RV +E++ L NPPDGIR L E+D++AEIH E++GP TPY GG F +KL+L++ FP +PP+G FLTKI+HPN+APNGDICVNTLKRDW+A++ L+HVLQVIRCLLIVPFPESSLNDEAG++FME Y EY RR K+ ++HA+KS
Sbjct: 1 MAAHENFSPQILQRVAKEVRQLATNPPDGIRLL--EQDSLAEIHVELRGPEETPYVGGFFEVKLLLTDGFPTTPPKGVFLTKIFHPNIAPNGDICVNTLKRDWSADLDLSHVLQVIRCLLIVPFPESSLNDEAGKLFMECYDEYARRAKILTDIHATKS 157
BLAST of mRNA_P-littoralis_Contig63.87.2 vs. uniprot
Match: A0A7S2W2W0_9STRA (Hypothetical protein (Fragment) n=1 Tax=labyrinthulid quahog parasite QPX TaxID=96639 RepID=A0A7S2W2W0_9STRA) HSP 1 Score: 227 bits (578), Expect = 3.820e-69 Identity = 106/169 (62.72%), Postives = 138/169 (81.66%), Query Frame = 2
Query: 272 MSKRKMSLLSSFENISPQVISRVGREIQDLERNPPDGIRFLPQEEDTIAEIHAEIKGPVGTPYDGGSFHIKLVLSNDFPHSPPRGFFLTKIYHPNVAPNGDICVNTLKRDWTAEVTLTHVLQVIRCLLIVPFPESSLNDEAGRMFMESYTEYERRVKVWVNVHASKSLS 778
M+KRKMS SS EN+SPQV+ + RE++ L P +GI L EED + +I A+I+GPVGTPY+GG+F KLVLSNDFP+SPPRGFFLTKI+HPNVAPNGDICVNTLKRDW A++ ++H+ QVIRCLLI+PFPES+LN++A ++F+ESY EY +R K+ ++HA+K S
Sbjct: 1 MTKRKMS--SSHENLSPQVLQSIARELRKLAVKPLEGIHILINEED-LTDIQADIEGPVGTPYEGGAFRCKLVLSNDFPNSPPRGFFLTKIFHPNVAPNGDICVNTLKRDWKADLGMSHIFQVIRCLLIIPFPESALNEDASKLFLESYNEYAKRAKLMTSIHAAKKCS 166
BLAST of mRNA_P-littoralis_Contig63.87.2 vs. uniprot
Match: A0A7S2WL03_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WL03_9STRA) HSP 1 Score: 227 bits (579), Expect = 6.660e-69 Identity = 109/185 (58.92%), Postives = 143/185 (77.30%), Query Frame = 2
Query: 299 SSFENISPQVISRVGREIQDLERNPPDGIRFLPQEEDTIAEIHAEIKGPVGTPYDGGSFHIKLVLSNDFPHSPPRGFFLTKIYHPNVAPNGDICVNTLKRDWTAEVTLTHVLQVIRCLLIVPFPESSLNDEAGRMFMESYTEYERRVKVWVNVHASKSLS---AGVEGSGELTAGSGSGSGATIE 844
++ +NI+P+VI R+ RE++DL ++PP+G+RFLP + DT+ E+H E+ GP TPY GG+F +KLVL D+P +PPRGFFLTKI+HPNV+ NGDICVNTLK+DW+ VTL+H+L VIRCLLIVPFPESSLNDEAG++FMESY +Y R ++ VHA + +S A S E TAG SG+GA E
Sbjct: 21 ATMQNINPRVIGRLNRELRDLTKSPPEGVRFLPGDMDTLTEVHVELDGPEETPYFGGTFRMKLVLGQDYPQAPPRGFFLTKIFHPNVSNNGDICVNTLKKDWSQTVTLSHILAVIRCLLIVPFPESSLNDEAGKLFMESYDDYAERARLMTQVHAMRRISGQSATCAASDEGTAGVESGTGAAEE 205
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
| Stop | 1 |
| Start | 1 |
| Seed ortholog | 2880.D7FI21 |
| Preferred name | UBE2S |
| PFAMs | UQ_con |
| Model size | 1247 |
| Max annot lvl | 2759|Eukaryota |
| KEGG ko | ko:K10583,ko:K13764,ko:K14292 |
| KEGG Pathway | ko03013,ko04120,ko04744,map03013,map04120,map04744 |
| Hectar predicted targeting category | other localisation |
| GOs | GO:0000151,GO:0000152,GO:0000209,GO:0000278,GO:0000280,GO:0003674,GO:0003824,GO:0004842,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005680,GO:0005737,GO:0005829,GO:0006464,GO:0006508,GO:0006511,GO:0006807,GO:0006996,GO:0007049,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009893,GO:0009987,GO:0010458,GO:0010498,GO:0010604,GO:0010992,GO:0010994,GO:0016043,GO:0016567,GO:0016740,GO:0019222,GO:0019538,GO:0019725,GO:0019787,GO:0019899,GO:0019941,GO:0022402,GO:0022607,GO:0030163,GO:0031145,GO:0031323,GO:0031325,GO:0031396,GO:0031398,GO:0031399,GO:0031401,GO:0031461,GO:0031625,GO:0031974,GO:0031981,GO:0032268,GO:0032270,GO:0032446,GO:0032991,GO:0034622,GO:0035519,GO:0036211,GO:0042592,GO:0043085,GO:0043161,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043412,GO:0043632,GO:0043933,GO:0044085,GO:0044093,GO:0044237,GO:0044238,GO:0044248,GO:0044257,GO:0044260,GO:0044265,GO:0044267,GO:0044314,GO:0044389,GO:0044422,GO:0044424,GO:0044428,GO:0044444,GO:0044446,GO:0044464,GO:0044770,GO:0044772,GO:0048285,GO:0048518,GO:0048522,GO:0050789,GO:0050790,GO:0050794,GO:0051171,GO:0051173,GO:0051246,GO:0051247,GO:0051258,GO:0051338,GO:0051347,GO:0051438,GO:0051443,GO:0051603,GO:0060255,GO:0061630,GO:0061631,GO:0061650,GO:0061659,GO:0065003,GO:0065007,GO:0065008,GO:0065009,GO:0070013,GO:0070534,GO:0070647,GO:0070979,GO:0071704,GO:0071840,GO:0080090,GO:0085020,GO:0140014,GO:0140096,GO:1901564,GO:1901565,GO:1901575,GO:1902494,GO:1903047,GO:1903320,GO:1903322,GO:1904666,GO:1904668,GO:1990234 |
| Exons | 4 |
| Evalue | 1.25e-116 |
| EggNOG OGs | COG5078@1|root,KOG0423@2759|Eukaryota |
| Ec32 ortholog description | Ubiquitin-conjugating enzyme E2 |
| Ec32 ortholog | Ec-10_003200.1 |
| EC | 2.3.2.23 |
| Description | exit from mitosis |
| Cds size | 873 |
| COG category | O |
| BRITE | ko00000,ko00001,ko01000,ko04121 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
| 1680791314.6129382-UTR-P-littoralis_Contig63:433143..433414 | 1680791314.6129382-UTR-P-littoralis_Contig63:433143..433414 | Pylaiella littoralis U1_48 | UTR | P-littoralis_Contig63 433144..433414 + |
| 1680791314.6862066-UTR-P-littoralis_Contig63:443103..443206 | 1680791314.6862066-UTR-P-littoralis_Contig63:443103..443206 | Pylaiella littoralis U1_48 | UTR | P-littoralis_Contig63 443104..443206 + |
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
| 1680791314.6268172-CDS-P-littoralis_Contig63:433414..433512 | 1680791314.6268172-CDS-P-littoralis_Contig63:433414..433512 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig63 433415..433512 + |
| 1680791314.640828-CDS-P-littoralis_Contig63:434081..434158 | 1680791314.640828-CDS-P-littoralis_Contig63:434081..434158 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig63 434082..434158 + |
| 1680791314.6515207-CDS-P-littoralis_Contig63:441183..441374 | 1680791314.6515207-CDS-P-littoralis_Contig63:441183..441374 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig63 441184..441374 + |
| 1680791314.6698332-CDS-P-littoralis_Contig63:442596..443103 | 1680791314.6698332-CDS-P-littoralis_Contig63:442596..443103 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig63 442597..443103 + |
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig63.87.2 >prot_P-littoralis_Contig63.87.2 ID=prot_P-littoralis_Contig63.87.2|Name=mRNA_P-littoralis_Contig63.87.2|organism=Pylaiella littoralis U1_48|type=polypeptide|length=291bp
MSKRKMSLLSSFENISPQVISRVGREIQDLERNPPDGIRFLPQEEDTIAE IHAEIKGPVGTPYDGGSFHIKLVLSNDFPHSPPRGFFLTKIYHPNVAPNG DICVNTLKRDWTAEVTLTHVLQVIRCLLIVPFPESSLNDEAGRMFMESYT EYERRVKVWVNVHASKSLSAGVEGSGELTAGSGSGSGATIEGGVVKAGGS GHAGAAAAAAAAAAAAAAASADAKKKSASVGGAKKGSSSGRGGAAGENGV SGGGKRREDLSAAGARAVPTPRKTVKDRQKEAKKKGLKRL* back to topmRNA from alignment at P-littoralis_Contig63:433144..443206+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_P-littoralis_Contig63.87.2 ID=mRNA_P-littoralis_Contig63.87.2|Name=mRNA_P-littoralis_Contig63.87.2|organism=Pylaiella littoralis U1_48|type=mRNA|length=10063bp|location=Sequence derived from alignment at P-littoralis_Contig63:433144..443206+ (Pylaiella littoralis U1_48) GATCTCACTCATCACACGGAACACGGAACGCTCGTGCCTAGGCTTGATCC
TCGGATCGTTTGTTCAATTCCTGGAATATCGAGAAGGGGCGGAGAGACAG
AGAAAGAAGGAGGAGGAAGAGGACTGGCTGAAAGACGCGCCGCACGCGGG
CCCGCCGGAATTCACGAACTGCCAATTTTGTGTGTTTATCAAGAAAAACA
CAGGCGGTGTGGCGCTCTGCAGCAACAGGGCGGTGGTGTGGTGTGACTTC
GTGTGTGCTGCTCCCACGGCCATGAGCAAGAGAAAAATGTCACTTCTGTC
GTCATTCGAAAACATATCACCCCAGGTCATCAGCCGGGTCGGGCGGGAGA
TACAGGACCTTGAGCGAAAGTGAGTGTGAGCAAGAGCAGCGCCCTCGTGA
GGTTGCTAATTTACGATATCATACTTGCAGTCAAGAACAGGTTCATCCCC
ACAATATCTCGGGTGGACTCTCTTTCTCTCTCTGTTTGGGTCGTAGGCAG
CAGAGTCGAGCGTCGAACCGATTTACTGCAGCTCAATGACGCTTCTTCAA
GCAGCGGACCCGCAACATCACCCTCGCGCCGGGCGCTGGGCGCGGGGTGG
AGGAGGGTCGAGAGCTTTACGAAAGTGTGCGTGCCAATCTTGCGTGCGCC
TTCCGTAGGTTACTGGTTTCAACGGGTGTCGATGAAAAGAGAGAATACTC
TCGAGTACATATTAGGGCCTTCGTATTATCGTATTCGTATTATTATCGAA
GATGCGATGCAACACCACGAAGAGTTTTCCTTTTCTTCATGTGAAACAAG
GAGCAAGCAAACGTCTTGGTTGTTGCCGCAGCCCTCCGTGTGTAAGCTGC
GCCCCCTCCCCCCTGATATCACGACCTTGCCGCTTAGATTGACCCTCCCG
CCGCTGGCCATTTCTTCGGCTTCCTTTTCTTACCGCAGCCCACCAGACGG
CATCCGGTTTTTGCCTCAGGAAGAGGACACCATCGCTGAAATCCACGCGG
AAATTAAGGGTCCAGGCAAGTTGATATTTCCGGATATTGCGACGTTTCGA
AACACGAAACTTCGTTCCGTGTCTAATCATGTCATATCTATGATGTCATA
TCATGTATGCTTACTACTGCTGCTACGTTGTACTCCGTATATACTTCGAA
GTATCGTATTCCGTTGTACTCCGGAGTACTCGGTATGATATACATATATA
CAGAGTACCAGGTATATTTTTATGTCCGAAGTACGAGTATATCTTCGTCC
GTCTAGTTGGGGTCCTGAGACTTTTTAATTTTTAGTCGATCGCCAGAGAG
AAAAATCAGGACACATGTTGATGGTTCACCCAAACGTCCACAATCCACTC
AAAGCCAAAGTATCATCTTGGTACAGCGGTGTCATAAGATACACCCTTTT
CCTGCCTACAACACTGCTGGAACTAACGACAGTGGTTTGTGTCACTGACT
CTCATGACCAAGATATAAGGCCAAAACGTAAAACTCAGCAGCAGCCAGCA
GAGCAGCCAGCAGCGCCGGGGCGGAGTTAGAATTTGATGTGTTTGAGGGC
TCACGTATTGTTATGCCTTGCTTTGGTTGACCCGATAACGCAAACATCGG
CAGCTACTTGTACTATTCGCGGAGGGATGGAAATACACACACATTATTAT
TCGGGGATTCCCATGTAATAATACAGCAGTCCTTGTGATGAGGGCGATCC
GACAAGGGCCTTGAGTACCGGTCGTATTACATTACTTCGCTGCTTCGCTG
GTGCGCAGGCAGCGGTGCACGTATGCATGTACTCGTACTGCACGTGATGG
CGCACCTCCCGAAAGCAGTCGGTCATTCGAAAAAATAATCTGCTGTGGTC
GCACGAACTTGTTTCCAAGAAACTTGCACCCAAGGAGAACGAACCTGCAA
TACGAAGTACATATCATACCAGTCTGTTCCGGAATATATTTCCTGTTTGG
GCACGAACCGAATAACGTGGGAACACTGAGGAATTTGCCGATATCGGTTC
GACCCCCAGATTCGTGAATTCGTTTTTTTTTTTCGCGGGCAACTTTTTTT
TTTTTCCGGTTTGTTTTTCCCGGTATTCCGCGACAAAAATATCTTTCGCC
GGGAAAAGTACTGGTTGAGCAATAGAAAGGGCACAGTTGAGACACTTTTT
TTGTATACTTATATATATATTTGAACAGGGGACCCACACAACACCTAAAA
AAAAAAATCTCAAAACGACAATACAGTATCTGACTTCGCAAGGAGCACTT
TAAAAAAAGTAAATTTCCTTACTGTACTGGGAAAGAACGGAAATCCCAGG
GAATCCCCGGGGATGATGATTTACAGTCATTCCCGGGTCAAAATGGTATA
TTTCACCCCACTCCAACTCGGACGGTGTGAGCACACCTTTCATGCTTCCA
GATGTGCTCTCCATCCTCGTCATTATACTAAACATACGCTCAGGGGAGCT
GCAACGGTACATTATCTGATGAGTAGAAACACTAGGGTGTTTGCGGAGAC
CTGACTCGACTCAGGTTTCACTCAGGTTTCGGAGTGGTCCGTTCGCCCTT
TATTTTTATTTTTTTCCTTCGAGATGCTGCTAACACTCCGCACACGTACT
TTTGTACTCCCTCTCTAGCCCATGAATGCGTGCCTGTGCAGCTAGCTCTT
CTGCATTTCTCTGAGCTGATCACTTTTATACATTTTGGCGGTAGACTGAC
ACGAGAGGTTTTGCGTGTTATTACGTACCACGTGGGGTCTTCGTTGCGAG
AGCAGTCTGTACGTGGCTGTGGTGTTGTATTTCTGCAGCATGCTGCAGCG
GGAGTACTGCTGTGGTCCCGCATAAACCCAACCATGGGCCCTGACGTCAG
GGGGCATCTTGGGCATCCTGCCAATCAAGCAGCTGTTCCATAAGAAGACC
TGAGCAAAAACTAACTGAGTCGCTTTTTGCTCAGGTCTTTTGACACGAAA
GGTCGGAGGAAAAGACCAAAGTGGGTTTTTAACCCTTTGACCCCCCAGGG
GTCTGAAAAATATAATCGTGGAGACAAAAAAAAAATGATTCCGGTGCGCC
GATGATTGGCGAATGGTCGACAGTCTCAAAAAAAAAAAAAGTACTTATGT
CTCGCTGACTCCCTGCTCTCTCCGGGTGAAAAAAGGGGTGTGACTTGATT
ATACACAGAAATTTGTCCCCAATTTGCCCTGAAACAAATGGGGACAGATG
TCAGTCTAAAGCTACACCAAACGTTTTTGGGGGAGTCAACTTACAATAGT
TGTTTGTTTAGTTTTACAAGAATATTGCTTCAAAGGGATACTGCTGTATG
AAAGGTAGCACGCAGCAACACCGCCACTTAGCATGGCAGATCAGGGTACC
CCACTCGACAACCACACAGCAATAGGGTTCCACTCCGCAAGGGTTGTACC
CGCGCACGACATTCATTCAGGGTCTACAGCATCTCACCAGCAGGAGCAAG
CAGCAGCTGCACTAGCCTCTGAAGTCAAACATATCATGTTGCATGTGATC
AACGCAAGGCTGTCGGCATGTAATGGTACCCATGTGATGATACTCGTACG
AGATCGCCGGGTATGTTTGTGAGCTTTCAAACGTGCGTGGCGCGATGTGT
CTGTTTGTAGTGTCGGCCCCCGTGTGCGCGGTGTGTGTCTCACCAACCCA
TCGCACGACACATCATCAGCTAGCTGATTGCTGCAGCATGCACAGCAGCA
GCAGCAGCAGCAGCACAAAAATAGTTGCATAATCAGGGTATGTATGTGAG
TTCAGCAGTACGTCAGCATCATCAGCGTTTCATAGCGGTAGTCTAACATG
GTCTATGTATCATGTCTTCTGTATGTGTGCATGTTGTGTGCAATGCAGGG
AGGGTTGCCGGCATGAAGTGTGATACAAGACGATCGCCGTTGTGTCTACT
ATGCTGTCGAGGGAAGAGAATAACACACAACAAACCTAACGGTCGGGCGC
GCTTGGTCTCCCATGATAATAAAATAAAACAAATGTAGCACCGAGGCAGC
CAACTATTGGTCGATCCACATACATTCCATCGAGCTCACGGAACCACACC
CAAAATTCCTGTAGATAGCCGCCTTCAAAACCCAAGTAAAAAAAAAAAAG
TGTCCCCAAATTGTCCCCAATTGGGATTGGGGGGTTCAAAGGGTTAAGGG
ACCAAATTGGGTCTTTTCCTAAAGATCCCTTTTTGCCTACTTCAAAAATG
TGCACAAAGACCAAAGCGAAACCTTAATCTAGCCCGCTGTGCGCAAACAC
CCTACTGGTAGATAGATTTATGTGTTCGTTGTCATATCTGTTCGAGATCC
TTGTCTGGAGAGAGGCGAACACAATGATTTTTTTTTTTTCTTACAAAGAC
ATCCGTGTGTTCGCCTCTCTCAACACATGATGTACGTGTGTCACACAAGA
CGACCACTAAATTGTCTTGTTGAGCCTGATACCCTCAGGGGAGCTGCAAC
GGTACATTATCTGATGAGTATAGAAACACTGGTAGACGTATTTTCCTCTT
TGTGTTCGTTGCAATATCTGCTCTAGATCCTCGTCTGGAGAGAGACGAAC
ACATTGATGTTTTTGTAAGTTTAAGAAAAAAAAAGACATCAGTGTGTTCG
CCTCTCCCTAGACGAGGATCCAGCAAGATTAGCAACGAACACAGTGAGTA
ATATAATATACGGATCTACTTGTTTTTGTAAGTTAAAAAAAAAAACATGA
AACCGGAACTATATTTCCAAATGCCTAAATCGGAACTTTATTCCCGAACA
GACTGGTACGGTACATATATGTTATCCTGCACAACGGCAACAGCAGCAGC
ATACCTGGCGTACTGCAGCATGAATCACGTGTATTGGTGGGCACAGCAGG
TATGTGGGTGTGTGTGCTACGTGCGTGTTGCCATCCCATATATTCTGGAC
GCCAGTCTTCACCGTTGGGTACAATGAAGGTGGGCGCACCGCACCAGCCG
GGGTCATATCATACGTGCGGGATTCTGGCCAAACATGGATTTTTTTTTAT
TGTTTTTTGCTCCACCTTCCTTTTTCATGTGGTGCTTGTTTTTGTTTGGA
TCGCGAGAAAGGGTTCGACTAAATATGTGATATACTTTCCCTTCTCCTCG
TCGACTTTTTTTTTTATTCGAAACTAATGTTGAAAACTCGCGAAATCATC
TTGGAAATTTTTAGTCGTGCAACAACGTATATACTGTATCACACGAGTAC
AGCAGGGCCACTCCTAGGTTTTCGCAAACCCGACCGGAATTCCAAGTCAC
AACCTATTTTACAGCGGTATGATACGATTCTAGCTGAAGGTGTCAAAGGG
TTTCGAGGTTATCGACCGCACATGCGTTACAGCAGTACTGCTGTAACATA
ATGTTGGAAACCCATCACGTGATATCATACCTGCAGCAGTACAGCAGGTA
CCTGAGGTACCTGGTGCCAGTATTCAATATCGCGCCAGGGGGCTTTATTC
TTCAATATCACTACGTCATATATCAATGGTTTTTACACGTAGAACATTGA
ATATTTTCTTTCTTTTTTATTTTATTTCAAAGATCTTGCTAATTTTCGCT
GGACCCTCGTCTGGAACACATCGATGTATTTGTAGGAAAAATGAAAAAAA
ATGTCGTGGAAACGGACAAACCCTCGTTTCTTTTCACGTATCTCCCAGAA
AGGGCTCGTGGTGAAAGAAACAAACAAATTGCACTTCACGTCGTGAGACA
GCAGCAGAGCCTCTAGGCTTTTTTGAGTCCTGCATGTTTCGAAACAACTT
TCATCGTATGTTTTTGGCCCTCGACGGCGCCGCCCTCACGCTGTTGTTCC
ACCTCTCGCGTGCTGGTTAGGCAGGGGTCCCGAGAAGAGGGTGCGTTCGT
CAAGGTGGTTCCAGATCCCCGAGTTCTTGCGATAAAAATCATTAAATCTT
CACTTTTACGACTTCACGGCATGAGAGACAGATAACACAGCTTTGGAGGC
CTCCCTAGTACCAAGTACTGAGATTGATTATGTCGAAGTGGATGCCTACA
TAATACACTTGCCCTCGGCGCCGCTGCCTCCATGCAGTTGTCACTGCTTT
GTGTGCTGGCCAGAAAAGGGCTGCTACAACAGAAGCGGTGCGGCGGTGCT
GGAAAAAATAATACTCGTGAGGCGGCAGTCATACTTGAATATTACGTCGT
GAAGTCAATATTTTCGACAATCTCTGGCCACACCTGGCCAACTGCCCTGC
TGTAAGCAGGAATGGATTTGCTTGCTAGTGTGTGTTGTCTTCGTGTGCGC
TGTTCGTCCTGCTCATGCCTGCACTGCTGCTGCTGCTTATGTTGTAGGCG
GGGTTGGGTCAAGGGGTGTGTTCGTTGAAAATCTGGAAAATAACTTTGCT
CGTGGAAAACGAATTTTGTCAATTTTTTCGTTACGGCGTGGTATTTTTCA
GGGAGTTTTCGCGGTCGTGAGGAAAGTCGTTGGAAAAAATGGTTCCAGCA
ACGAACCGTCTAGGTGTTCGGACGATGACTGAAAGAAATCGCATAGGTAC
GGTGATAGAGCGCCTTCACAATTGTCCTCGTACATGTGATACGCGCATCA
TGCTTATATACCTGGCACGTTGTTTACAACAGCAGTCACCACGGGTACGT
TGTACTGCAAGTTGTACAGGAGGCGTGATTTGGCTGTGACGGAGGAATCG
TGCCTGGAAGTGTTGCTACGGGTATTCGTTCGTGTAACTACAATGCTACG
TAAAACACGACGCGTAATATATTTATATCTGCTTCGGTGAAGCATCCTCA
GCGGATAAATGAAGAAATTCCGCGAACTAGTGTTGTGATCCTGTGTATGT
AGCCGGCAAGCCTGGCACGTGTCGTACTATTTTATGTTTTTTTCGTTTCT
GGTTGCCTTTTCGATTTCTGCTGGGTAAATCACCGACGTCGTAAGTTCGA
GTCCCGGTCGGGGTTTTCTGGCGTACATCCTCAGAGTGCAAAGCGAATAT
GTCGTGAGTACGCACTGGCTTGAAAAAGCTAGCGAGGGAAAGAGACGGCT
GAACCCCTCTCGTGATAGGTCTCTCTCTCCTGAAATGACGACCGGGGTTT
CCTTTCCTGAATTTTGGCAAGCCCCGAAAAATGAAGGTGGAAAAGGAACA
AAAAACTCTTGTGTTCACCTTGTTCCTGTCTGTCGTGACCCCGGCTGGTC
CGCCCACGAATACCTCAAGGTGTAGACTGGCGCCCAGTTTATGGGGATGA
CAAACACACACATAGAGCAGCAGTTTAACGGGCGGGGGGGTGGATCCAAC
TTTCGAAGCAGTGCTTTTTGGTGATACTCCTTCCTTGTCCTTTCTTTGCA
TAGCCTGAACTGGTGCCAGATGTGTGTGTGTGTGTTGTCATCCCTTTAAT
TGGACGCCACTCTAACACCTTTCGGGTAGGTGGACGCTCCAACCGGGGTC
ACACAGCAGGAAGCCAACATAGGAGTTTTTTTTTTTTTCTCCACTTCCCA
CTGCGGTACTTGCCTTAATTTTTTCTCGCGAGAAAGGGTACAGCAATCCC
TTTCCCTCGTCGACACTTTGAATTTTGTTTACTCACGAATTAATCGCTTT
CCACCCTCACGCATGACATGAGAAAAATCCCTGATCGTGTTACTGCACCG
GGATTCGAACTCAAGCGTGAGTAGGTGTACATGCCGTTTATCGTGGACCC
ACGAGCTGTAGGTACGGTTTAATTTTCCCGCAGTCGCTTTTTCCAGCGAT
GGTTTGATTATTCGCCGTGATTTTTCAGCAACCCGCTCGTTGTTCTCCGA
CCAATCCCTTCCCATCATACATCGAATTTGTTTCAGATAATACAAACCTG
AAACAAACGGTACGGAGTTAATGTATTCCACACGTGTATTTGTTTCTTGA
ATCATGCACAGAAATTATGACGACGACACTGCTGTACACGTACTGCTGTC
TTGTGTCTTTCTTAACCTTCTGCTGGATACCGCCACAACCTCGCTATTTG
TATCCTGCTTTTGCTTTTTTTAGTTTTATCCCCAAAATCCACACCTTGAG
TCTTACCTCAAAATGCATCCCCGACAATAAAAAAAAACAGTCGGGACGCC
GTACGACGGGGGCTCGTTCCACATCAAGCTCGTCCTCAGCAACGACTTCC
CGCATTCACCGCCCCGCGGGTTCTTCCTCACGAAGATCTACCACCCGAAC
GTCGCACCCAACGGGGACATCTGCGTCAATACGCTCAAGAGAGACTGGAC
GGCAGAGGTCACCCTCACCCACGTCTTGCAGGTATGATATGCAGTAATAT
GTAACAACATCGCATTCTCGGGATCCGGCGGACGGAGAGAGGTGTGTCGT
TTCTTTTTTCAAGGTGCTTAAGCGGGTGAGGGAGGCGAGGGGTGACTCAT
GCATGCTTCGTCCTGTGTGCCATGTAGATTGGTATTACTTGGAGTATATA
TTATACAGATACTTCGAGTATGATGTTATCCGGATGTAAGTGGTCGCCAC
CTTTCTCCTCGCCCTCAACTTTCAGGCACGATAAGGAGTATGCTGCTGCT
GCTGCTGCGGTACATCTTGTTGTTGTTGTACGGTTTGCGACGGCGGTGGG
TCACGCAGGGTAGAGAAGGCACCGGTTGAGAGATAGATGCGATACACGCG
AGATTGTTTTAGGACGTAATTTGCCGTGGTGGTGGTGTTCTGGACGCGGG
CGGCTTGTTGTTGCCCGCCCGGTGCGCGCTGCTCTTGTGGTGGCTACCAC
GGCGGGTTTGTGGATCCTTCACCTTGCCTACGCCTGGCCCGTGCATATAT
ATGTACAAGTATGATGGCAAGCGAGCCGCTTTTACACGGCAGACGGGGAA
CCGTGTCCCAAGCTCTTCCCTTGAAATATCGCATAACGTGGTTCGGGAGT
AGGGGGAAAGGTGCGGTCACACGGTGGAACGGCACGGCGGCGCGGGGCCG
TGTGTAATCGGTCTGAAGCAGCTGCGGTTGCCGCCGCTTCTGGTGCTGTT
GCTGTTGCTGCCACCGCTTGTTCTGACCATACATCACACCCCTTTCCTTT
TGAGCGCAAAGTACTATGAGGGTAAAAATTGTAGGTGGTGAGCGCAAAGT
ACTATGAGGGTAAGAATTGTTGGTGGCCTTGACAGATTTCTCGCCGTTGG
TTTGCATAGAGCAGCTGCGCTCAGAAAGCAGTGCAGTGTGCATTCTATCA
GGTAGTATCTTCAAGATGGGACGGAGACATGTTCCAGATCATGTCCCGAG
CAATTTTGTGTATCCCCCCGTTGTACCGAGGGTAATCCATCACCTGCTGT
CGCGTTGTGTGCTCTTGTGGAACAGGCAGTTCGGCGCTGTTCTGTACCTG
CCGTCGTTCCTCCTTAATTTCGCCCTGTTCCGTAGTTTCAATGCCTTCAC
TTGTTCGGCGGCAGGGACTCTCCTTCGACTCACACACTCTTTTCTCACGT
TTGTATCGGTTTTGTATTTTACTGGTCGCCCTGCCCCACCGCGATCCACC
CAGGTGATTCGATGCTTGCTTATCGTACCGTTCCCGGAGTCAAGCTTGAA
CGACGAGGCCGGGCGGATGTTCATGGAGAGCTACACCGAGTACGAGCGGC
GCGTGAAGGTGTGGGTGAACGTCCATGCCTCCAAGTCGCTCTCCGCAGGA
GTGGAGGGGAGCGGTGAGTTGACCGCTGGCAGCGGGAGCGGGAGCGGAGC
GACCATCGAAGGAGGCGTCGTGAAGGCAGGGGGGAGCGGGCATGCGGGAG
CGGCGGCGGCAGCGGCAGCGGCGGCGGCAGCGGCGGCGGCGGCATCTGCT
GATGCGAAGAAGAAATCGGCATCGGTAGGTGGGGCCAAAAAGGGTTCGTC
GTCCGGCAGAGGAGGAGCCGCTGGGGAGAACGGGGTCTCCGGCGGCGGTA
AACGTCGGGAGGATTTGTCAGCGGCGGGAGCGAGGGCGGTGCCGACGCCG
AGGAAGACGGTGAAGGACCGCCAAAAGGAGGCCAAGAAGAAAGGACTCAA
GCGATTGTAGAAACGCTACCTTTTACCTCTTTTTTCGTTTCATTTTGCCC
TCGTTTTCGGCGAAATGAAATACTTGATTGCCTCTTGTGCTTTTGCAGTG
GAGTTCCTGGGTA back to topCoding sequence (CDS) from alignment at P-littoralis_Contig63:433144..443206+ >mRNA_P-littoralis_Contig63.87.2 ID=mRNA_P-littoralis_Contig63.87.2|Name=mRNA_P-littoralis_Contig63.87.2|organism=Pylaiella littoralis U1_48|type=CDS|length=873bp|location=Sequence derived from alignment at P-littoralis_Contig63:433144..443206+ (Pylaiella littoralis U1_48) ATGAGCAAGAGAAAAATGTCACTTCTGTCGTCATTCGAAAACATATCACC CCAGGTCATCAGCCGGGTCGGGCGGGAGATACAGGACCTTGAGCGAAACC CACCAGACGGCATCCGGTTTTTGCCTCAGGAAGAGGACACCATCGCTGAA ATCCACGCGGAAATTAAGGGTCCAGTCGGGACGCCGTACGACGGGGGCTC GTTCCACATCAAGCTCGTCCTCAGCAACGACTTCCCGCATTCACCGCCCC GCGGGTTCTTCCTCACGAAGATCTACCACCCGAACGTCGCACCCAACGGG GACATCTGCGTCAATACGCTCAAGAGAGACTGGACGGCAGAGGTCACCCT CACCCACGTCTTGCAGGTGATTCGATGCTTGCTTATCGTACCGTTCCCGG AGTCAAGCTTGAACGACGAGGCCGGGCGGATGTTCATGGAGAGCTACACC GAGTACGAGCGGCGCGTGAAGGTGTGGGTGAACGTCCATGCCTCCAAGTC GCTCTCCGCAGGAGTGGAGGGGAGCGGTGAGTTGACCGCTGGCAGCGGGA GCGGGAGCGGAGCGACCATCGAAGGAGGCGTCGTGAAGGCAGGGGGGAGC GGGCATGCGGGAGCGGCGGCGGCAGCGGCAGCGGCGGCGGCAGCGGCGGC GGCGGCATCTGCTGATGCGAAGAAGAAATCGGCATCGGTAGGTGGGGCCA AAAAGGGTTCGTCGTCCGGCAGAGGAGGAGCCGCTGGGGAGAACGGGGTC TCCGGCGGCGGTAAACGTCGGGAGGATTTGTCAGCGGCGGGAGCGAGGGC GGTGCCGACGCCGAGGAAGACGGTGAAGGACCGCCAAAAGGAGGCCAAGA AGAAAGGACTCAAGCGATTGTAG back to top
|