mRNA_P-littoralis_Contig618.38.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig618.38.1 vs. uniprot
Match: A0A6H5LCT1_9PHAE (MULE domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LCT1_9PHAE) HSP 1 Score: 248 bits (634), Expect = 8.100e-76 Identity = 128/296 (43.24%), Postives = 179/296 (60.47%), Query Frame = 1
Query: 28 QRFPDTKLLRAAVGRFFAHDSRSFTSSKNSGGKQKAYVCSGKEGGCLAQVRAFKIASGEWRVNKITSTHTNCAGGKTPGRSSALQHIADQAVKDNPGTTGVALKRKMQRDAGMKVGHRTATRMKNTSKKSHQAAAAGSYQQLTSLCAELQTGCPGTVAEVERNADGKFKRLFCMLGRAAYVCANSPFKLLCVDAGHLKGEWKGVMLVATCKDANNTLVQAATVVCDKENADNYTWLYKMMKKNAEMKVLLDSPKTTIFTDQHLSHAPAINYEAGNCQWRFCLRHMINNLTQKVGEN 915
+ + D K LR V F+ RSF S K GG+QK Y+C+G GGC A VRA + SGE++V H +C+GGK +++AL+ A A+ NP G LKR +++ G++V + A+R+K + ++ + Y+ + S C EL CPG+VA VER G+F+ +F MLGRAA+ SP K++ +D GHLKGEW G+ML TCKDANN + ATV+ KE+ Y L + KKN +M+ LL+ KTT FTDQH A+ EA Q R+CLRH+I NL +K+G N
Sbjct: 6 KHYKDAKALRLDVAAMFSAAGRSFHSGKG-GGRQKKYICNGAAGGCQATVRACRQRSGEFKVTFFIPEHNDCSGGKVGAKAAALEGFASDAMVSNPTMKGTDLKRSLEQSTGLRVSYSAASRLKVAATRASKEQLEHGYRIMDSYCKELVKDCPGSVAVVERETTGRFRSVFVMLGRAAHAAVRSPIKVVGMDGGHLKGEWNGMMLTLTCKDANNENIHVATVIGPKEDTSLYKTLLRNCKKNLKMRDLLEDSKTTFFTDQHKGATCALRGEAPLAQHRYCLRHLILNLEEKIGSN 300
BLAST of mRNA_P-littoralis_Contig618.38.1 vs. uniprot
Match: A0A6H5JUM0_9PHAE (MULE domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUM0_9PHAE) HSP 1 Score: 233 bits (593), Expect = 8.940e-70 Identity = 125/292 (42.81%), Postives = 174/292 (59.59%), Query Frame = 1
Query: 40 DTKLLRAAVGRFFAHDSRSFTSSKNSGGKQKAYVCSGKEGGCLAQVRAFKIASGEWRVNKITSTHTNCAGGKTPGRSSALQHIADQAVKDNPGTTGVALKRKMQRDAGMKVGHRTATRMKNTSKKSHQAAAAGSYQQLTSLCAELQTGCPGTVAEVERNADGKFKRLFCMLGRAAYVCANSPFKLLCVDAGHLKGEWKGVMLVATCKDANNTLVQAATVVCDKENADNYTWLYKMMKKNAEMKVLLDSPKTTIFTDQHLSHAPAINYEAGNCQWRFCLRHMINNLTQKVGEN 915
D + LR V F+ RSF S K GG+QK Y+C+G GGC A VRA + SGE++V +C+GGK +++AL+ A A+ NP G LKR + + G++V + TA+R+K +K++ + Y+ + S C EL CPG VA V+R G+F +F MLGRAA SP K++ +D GHLKGEW G+ML TCKDA+N ++ ATV+ KE+ Y L + K N +M+ LL+ KTT FTDQH A+ EA Q R+CLRH+I NL +K+G N
Sbjct: 52 DAEALRLDVAAMFSAAGRSFHSGKG-GGRQKKYICNGAAGGCQATVRACRHWSGEFKVTFFIPEQNDCSGGKVGAKAAALEGFASAAMVSNPTMKGTDLKRSLVQGTGLRVSYSTASRLKVAAKRASKEQLEHGYRIMDSYCKELVKDCPGPVAVVQRETTGRFPSVFVMLGRAARAAVRSPVKVVGMDGGHLKGEWNGMMLTLTCKDAHNEMINVATVIGPKEDTSLYKTLLRNCK-NPKMRDLLEDSKTTFFTDQHKGATCALRREAPLAQHRYCLRHLILNLEEKIGSN 341
BLAST of mRNA_P-littoralis_Contig618.38.1 vs. uniprot
Match: A0A6H5KMN6_9PHAE (MULE domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KMN6_9PHAE) HSP 1 Score: 226 bits (576), Expect = 7.070e-69 Identity = 120/281 (42.70%), Postives = 167/281 (59.43%), Query Frame = 1
Query: 28 QRFPDTKLLRAAVGRFFAHDSRSFTSSKNSGGKQKAYVCSGKEGGCLAQVRAFKIASGEWRVNKITSTHTNCAGGKTPGRSSALQHIADQAVKDNPGTTGVALKRKMQRDAGMKVGHRTATRMKNTSKKSHQAAAAGSYQQLTSLCAELQTGCPGTVAEVERNADGKFKRLFCMLGRAAYVCANSPFKLLCVDAGHLKGEWKGVMLVATCKDANNTLVQAATVVCDKENADNYTWLYKMMKKNAEMKVLLDSPKTTIFTDQHLSHAPAINYEAGNCQWRFC 870
+++ D K L+ V FA RSF S N GG+QK ++C+G +G CLA+VRA K SGE++V I H +C+GGK RS+AL+ A A+ NP G LKR +++ G+KV + A+R+K + ++ + Y+ +TS C EL CPG++A V+R G+F+ LF MLGRAAY SP K++ +D HLKG+W G ML TCKDANN + AT + EN D Y L + KKN +M+ L+ KTT +TDQH A+ EA Q R C
Sbjct: 6 KQYKDAKALKVHVAALFAGAGRSFHSG-NGGGRQKKHICNGAKGRCLAEVRACKQRSGEFKVTFIIPDHNDCSGGKVGARSAALEGFASAAMVSNPTVKGTDLKRSLEQQTGLKVSYSAASRLKVAATRASKEQLEHGYRIMTSYCKELVKDCPGSIAVVQRETTGRFRSLFFMLGRAAYAAVRSPIKVVGMDGAHLKGKWNGQMLTLTCKDANNENIHVATAIGPVENTDLYKTLIRGCKKNPKMRDFLEDSKTTFYTDQHKGGKCALEGEAPLAQHRNC 285
BLAST of mRNA_P-littoralis_Contig618.38.1 vs. uniprot
Match: A0A6H5JW23_9PHAE (MULE domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JW23_9PHAE) HSP 1 Score: 222 bits (566), Expect = 3.050e-67 Identity = 120/300 (40.00%), Postives = 170/300 (56.67%), Query Frame = 1
Query: 76 FAHDSRSFTSSKNSGGKQKAYVCSGKEGGCLAQVRAFKIASGEWRVNKITSTHTNCAGGKTPGRSSALQHIADQAVKDNPGTTGVALKRKMQRDAGMKVGHRTATRMKNTSKKSHQAAAAGSYQQLTSLCAELQTGCPGTVAEVERNADGKFKRLFCMLGRAAYVCANSPFKLLCVDAGHLKGEWKGVMLVATCKDANNTLVQAATVVCDKENADNYTWLYKMMKKNAEMKVLLDSPKTTIFTDQHLSHAPAINYEAGNCQWRFCLRHMINNLTQKVGENWTSRTGYWPSWTQRTISPPT 975
F+ RSF S K GG+QK Y+C+G GGC A VRA + SGE++V H C+GGK +++AL+ A A+ NP G LKR +++ G++V + +R+ + ++ + Y+ + S C EL CPG+VA VER G+F+ +F MLGRAA+ SP +++ +D G+LKGEW +ML CKDANN + AT++ KE+ Y L KKN +M+ LL+ KTT FT QH A+ EA Q R+CLRH+I NL +K+G N S W S PT
Sbjct: 2 FSAAGRSFHSGKG-GGRQKKYICNGAAGGCQATVRACRQRSGEFKVTFFIPEHNECSGGKVGAKAAALEGFASAAMASNPTIKGTDLKRSLEQSTGLRVSYSAVSRLNVAATRASKEQLEHGYRIMDSYCRELVKDCPGSVAVVERETTGRFRSIFVMLGRAAHAAVRSPMQVVGMDGGYLKGEWNAMMLTLACKDANNKNIHVATMIGPKEDTSLYKTLLLNCKKNPKMRDLLEDSKTTFFTGQHKGATCALRGEAPLAQNRYCLRHLILNLKEKIGSNANS-------WVSFAASAPT 293
BLAST of mRNA_P-littoralis_Contig618.38.1 vs. uniprot
Match: A0A6H5L490_9PHAE (MULE domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L490_9PHAE) HSP 1 Score: 218 bits (556), Expect = 5.740e-62 Identity = 117/294 (39.80%), Postives = 167/294 (56.80%), Query Frame = 1
Query: 28 QRFPDTKLLRAAVGRFFAHDSRSFTSSKNSGGKQKAYVCSGKEGGCLAQVRAFKIASGEWRVNKITSTHTNCAGGKTPGRSSALQHIADQAVKDNPGTTGVALKRKMQRDAGMKVGHRTATRMKNTSKKSHQAAAAGSYQQLTSLCAELQTGCPGTVAEVERNADGKFKRLFCMLGRAAYVCANSPFKLLCVDAGHLKGEWKGVMLVATCKDANNTLVQAATVVCDKENADNYTWLYKMMKKNAEMKVLLDSPKTTIFTDQHLSHAPAINYEAGNCQWRFCLRHMINNLTQKVG 909
+ + D K LR V + RSF S K G +QK Y+C+G GGC VRA + S E++V H +C+GG+ ++AL+ A + G LKR +++ G++V + TA+R+K + ++ Y+ + S C EL CPG+VA VER G+F+ +F ML RAA+ SP K++ +D GHLKGEW G+ML TCKDANN + A V+ KE+ Y L + KKN +M+ LL+ KTT FTDQH A+ EA Q R CLRH+I N+ +K+G
Sbjct: 9 KHYKDAKALRLDVAAMLSAAGRSFHSGKG-GDRQKKYICNGAAGGCQVTVRACRQRSREFKVTFFIPGHNDCSGGEVGAIAAALEGFASANMVSTLTMKGTDLKRSLEQSTGLRVSYSTASRLKVAAARASNEQLEHGYRIMDSYCKELVKDCPGSVAVVERETTGRFRSVFVMLRRAAHAAVRSPMKVVGMDGGHLKGEWNGMMLTLTCKDANNENIHVAAVIGPKEDTSLYNTLLRNCKKNPKMRDLLEDSKTTFFTDQHKEATCALRGEAPLAQHRHCLRHLILNIEEKIG 301
BLAST of mRNA_P-littoralis_Contig618.38.1 vs. uniprot
Match: A0A6H5JAG6_9PHAE (MULE domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JAG6_9PHAE) HSP 1 Score: 188 bits (478), Expect = 5.820e-53 Identity = 112/294 (38.10%), Postives = 157/294 (53.40%), Query Frame = 1
Query: 28 QRFPDTKLLRAAVGRFFAHDSRSFTSSKNSGGKQKAYVCSGKEGGCLAQVRAFKIASGEWRVNKITSTHTNCAGGKTPGRSSALQHIADQAVKDNPGTTGVALKRKMQRDAGMKVGHRTATRMKNTSKKSHQAAAAGSYQQLTSLCAELQTGCPGTVAEVERNADGKFKRLFCMLGRAAYVCANSPFKLLCVDAGHLKGEWKGVMLVATCKDANNTLVQAATVVCDKENADNYTWLYKMMKKNAEMKVLLDSPKTTIFTDQHLSHAPAINYEAGNCQWRFCLRHMINNLTQKVG 909
+ + D K LR V + RSF S K GG+Q Y+C+G GGC A VRA + GE++V H + +GGK +++AL+ A A+ NP G LKR +++ G++V + A+R+K AA S +QL E F+R+ MLGRAA SP K++ D GHLKGEW G++L TCKDANN ++ ATV+ KE+ Y L + KKN +M+ LL+ KT FTDQH A+ EA Q R+CLRH+I N+ +K+G
Sbjct: 6 KHYKDVKALRLDVAAMISAAGRSFHSGKG-GGRQNKYICNGAAGGCQATVRACRQRLGEFKVTFFIPEHNDLSGGKVGAKAAALEGFASAAMVSNPTMKGADLKRSLEQSTGLRVSYSAASRLKV-------AATRASKEQL----------------EHGYRIMDSFRRVILMLGRAARAAVRSPMKVVGKDGGHLKGEWNGMVLTLTCKDANNEMIHVATVIGPKEDTSLYKTLLRNCKKNPKMRDLLEDSKTIFFTDQHKGATCALRGEAPLAQHRYCLRHIILNI-EKIG 274
BLAST of mRNA_P-littoralis_Contig618.38.1 vs. uniprot
Match: A0A6H5JC04_9PHAE (MULE domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JC04_9PHAE) HSP 1 Score: 176 bits (445), Expect = 2.520e-48 Identity = 110/304 (36.18%), Postives = 161/304 (52.96%), Query Frame = 1
Query: 16 LTLQQRFPDTKLLRAAVGRFFAHDSRSFTSSKNSGGKQKAYVC----SGKEGGCLAQVRAFKIASGEWRVNKITSTHTNCAGGKTPGRSSA--LQHIADQAVKDNPGTTGVALKRKMQRDAGMKVGHRTATRMKNTSKKSHQAAAAGSYQQLTSLCAELQTGCPGTVAEVERNADGKFKRLFCMLGRAAYVCANSPFKLLCVDAGHLKGEWKGVMLVATCKDANNTLVQAATVVCDKENADNYTWLYKMMKKNAEMKVLLDSPKTTIFTDQHLSHAPAINYEAGNCQWRFCLRHMINNLTQKVG 909
+T Q F + AV A RS + K +G +Q VC S GCL + G++++ K+ +H +CAGG GR+S+ +Q + DQ V+ NP G A+KR ++ G V R + R K + + AG+ +L SL ++ CPG+VA VE + D +F R F MLG+AAYV A+S ++ +DAGHLKG WKGVM V D+NN ++ +TV+ DKENA NY +L + +N M LL S + T F D H A+ WR C+RH+ N + + +G
Sbjct: 63 VTAGQVFSSRHDAKVAVAAELAATGRSMKNGKGAGSRQIHLVCKTCTSWVVKGCLQK-------GGDFKITKVEGSHVDCAGG---GRTSSAVVQPLVDQLVRANPKIAGPAIKRTLK-TVGFTVSDRQSQRAKKRIATASKEDEAGAISRLPSLFEGIERDCPGSVATVEVSPDNRFVRSFLMLGKAAYVAAHS---MVAMDAGHLKGSWKGVMYVLCMHDSNNKIIHVSTVLADKENATNYKFLLQQTCRNEHMHRLLSSGEVTFFIDGHKGSPAALRAVLPQAPWRACVRHLTNKIMKAMG 352
BLAST of mRNA_P-littoralis_Contig618.38.1 vs. uniprot
Match: A0A6H5K747_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K747_9PHAE) HSP 1 Score: 168 bits (426), Expect = 1.090e-47 Identity = 85/160 (53.12%), Postives = 111/160 (69.38%), Query Frame = 1
Query: 61 AVGRFFAHDSRSFTSSKNSGGKQKAYVCSGKEGGCLAQVRAFKIASGEWRVNKITSTHTNCAGGKTPGRSSALQHIADQAVKDNPGTTGVALKRKMQRDAGMKVGHRTATRMKNTSKKSHQAAAAGSYQQLTSLCAELQTGCPGTVAEVERNADGKFKRL 540
AVG+ FA D RSF +SKNSGG+QK Y +G GGC AQVR +K A G W+V+ I + HT+C+GG T GR++ALQH+A AVKD+ G+ LKRK++RD G+ V HRTA RMK T+K +A A YQ L + C LQ CPG+VAE +++ D FKR+
Sbjct: 15 AVGQMFAADGRSFVASKNSGGRQKTYRGAGHTGGCKAQVRGYKGADGVWKVHTIDAAHTDCSGGNTKGRTAALQHLASTAVKDHSPMNGMELKRKLERDTGINVAHRTANRMKMTAKDGDKATTAAGYQLLGTFCDLLQQQCPGSVAETQKHPDRTFKRV 174
BLAST of mRNA_P-littoralis_Contig618.38.1 vs. uniprot
Match: A0A6H5K832_9PHAE (MULE domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K832_9PHAE) HSP 1 Score: 172 bits (435), Expect = 7.670e-47 Identity = 98/228 (42.98%), Postives = 120/228 (52.63%), Query Frame = 1
Query: 325 GVALKRKMQRDAGMKVGHRTATRMKNTSKKSHQAAAAGSYQQLTSLCAELQTGCPGTVAEVERNADGKFKRLFCMLGRAAYVCANSPFKLLCVDAGHLKGEWKGVMLVATCKDANNTLV-----------------------------QAATVVCDKENADNYTWLYKMMKKNAEMKVLLDSPKTTIFTDQHLSHAPAINYEAGNCQWRFCLRHMINNLTQKVGENWT 921
G LKRK++RD G+ V HRTA RMK T++ +A A YQ L S C LQ CPG+VAE + +LCVDAGHLKG+W G+MLVAT KDA+ LV AT +CDKEN DNY+W Y MMK N +M +L+SPKTT+FTD+H SH PAI A N WR+CLRH I L + G+ T
Sbjct: 3 GKELKRKLERDTGINVAHRTANRMKMTARDGDKATTAAGYQLLGSFCDLLQQQCPGSVAETQ---------------------------VLCVDAGHLKGDWNGMMLVATSKDADTKLVXXXXXXXXXXXXXXXXXXXXXXXXXXXXVHVATSICDKENTDNYSWFYLMMKNNVDMAEVLNSPKTTLFTDKHKSHEPAITLHAPNTVWRWCLRHHIKALPEAPGQTVT 203
BLAST of mRNA_P-littoralis_Contig618.38.1 vs. uniprot
Match: A0A6H5KNP1_9PHAE (MULE domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNP1_9PHAE) HSP 1 Score: 162 bits (411), Expect = 3.550e-45 Identity = 88/187 (47.06%), Postives = 114/187 (60.96%), Query Frame = 1
Query: 334 LKRKMQRDAGMKVGHRTATRMKNTSKKSHQAAAAGSYQQLTSLCAELQTGCPGTVAEVERNADGKFKRLFCMLGRAAYVCANSPFKLLCVDAGHLKGEWKGVMLVATCKDANNTLVQAATVVCDKENADNYTWLYKMMKKNAEMKVLLDSPKTTIFTDQHLSHAPAINYEAGNCQWRFCLRHMINNL 894
L R ++ G K R+ R K + + QAAAAGS QQ C EL PG+VA VER+ DG FKR+ ++ RAA V A FK L VD GH+KG WKG++LVA KD NN LV A V+CDKEN+ NY +L+ MKKN +K L+SP TTI++D++ AI EA + R C +H+ NN
Sbjct: 6 LGRLYKKQKGHKADGRSVRRYKKNAVDALQAAAAGSIQQAPGYCRELVKMSPGSVANVERHPDGSFKRIAIVVNRAALVIARGLFKFLQVDGGHMKGTWKGMVLVAAGKDTNNNLVLVAFVICDKENSTNYEFLFSEMKKNVHLKAPLESPLTTIYSDENNGIKSAIEIEASDIIHRLCCKHLANNF 192 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig618.38.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig618.38.1 >prot_P-littoralis_Contig618.38.1 ID=prot_P-littoralis_Contig618.38.1|Name=mRNA_P-littoralis_Contig618.38.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=345bp MSNDYLTLQQRFPDTKLLRAAVGRFFAHDSRSFTSSKNSGGKQKAYVCSGback to top mRNA from alignment at P-littoralis_Contig618:149852..163973+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig618.38.1 ID=mRNA_P-littoralis_Contig618.38.1|Name=mRNA_P-littoralis_Contig618.38.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=14122bp|location=Sequence derived from alignment at P-littoralis_Contig618:149852..163973+ (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig618:149852..163973+ >mRNA_P-littoralis_Contig618.38.1 ID=mRNA_P-littoralis_Contig618.38.1|Name=mRNA_P-littoralis_Contig618.38.1|organism=Pylaiella littoralis U1_48|type=CDS|length=1035bp|location=Sequence derived from alignment at P-littoralis_Contig618:149852..163973+ (Pylaiella littoralis U1_48)back to top |