mRNA_P-littoralis_Contig617.67.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig617.67.1 vs. uniprot
Match: A0A6H5J9C0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J9C0_9PHAE) HSP 1 Score: 97.8 bits (242), Expect = 6.500e-20 Identity = 61/159 (38.36%), Postives = 86/159 (54.09%), Query Frame = 3
Query: 183 WLAIPSFSPHASRSFWASHALNTGQVNAHNVDDFSSYLQVSTATLRAKRLLGPT-PGAHKLGNEV*GRW*MLLGFGRNDRKGAPSRSPRNWVPGGWSSLLMLAPLCR----STAAKPGYCFVI**SSVKLGSSEDEKWFAWSQTFFENADYRNFKKFIN 644
WL+I +F PH RSFWAS ALN+GQVN++N++DFSS+LQVS+ATLR + AH LGNEV G + G + + S + A L + +T+ K + ++ +L EDEKWF W TFF D R F++F++
Sbjct: 645 WLSIENFGPHVCRSFWASSALNSGQVNSNNLEDFSSFLQVSSATLRNSYMAATANTAAHTLGNEVLGAVSNMACTGETTERANRPYGKKLCAKRNEFSADIQAYLAKHRGTTTSRKVFRALIRKRAASQL--LEDEKWFRWENTFFGEGDERLFQRFVD 801
BLAST of mRNA_P-littoralis_Contig617.67.1 vs. uniprot
Match: A0A6H5L2T2_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L2T2_9PHAE) HSP 1 Score: 94.4 bits (233), Expect = 1.010e-18 Identity = 58/161 (36.02%), Postives = 86/161 (53.42%), Query Frame = 3
Query: 180 HWLAIPSFSPHASRSFWASHALNTGQVNAHNVDDFSSYLQVSTATLRAKRLLGPT-PGAHKLGNEV*GRW*MLLGFGRNDRKGAPSRSPRNWVPGGWSSLLMLAPLCRSTAAK-PGYCFVI**SSVKLGSS----EDEKWFAWSQTFFENADYRNFKKFIN 644
HWL I +F PH R+FW++HALN+GQ++ N++DFSS+LQVS+ TLR + AH +GNEV G G KGA + L A R++ AK G ++ + ++ ++ E EKWF W TFF +D R F++F++
Sbjct: 606 HWLGISNFGPHVCRTFWSTHALNSGQISGSNLEDFSSFLQVSSTTLRNSYMAAAANTAAHTVGNEVLGAVVNSACTGETTEKGARPYGKKLSA-----RRLEFAGEIRASLAKYSGNGRLLFRALLQKRNASQLAEGEKWFRWENTFFSQSDERLFQRFVD 761
BLAST of mRNA_P-littoralis_Contig617.67.1 vs. uniprot
Match: A0A6H5JJP2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJP2_9PHAE) HSP 1 Score: 94.0 bits (232), Expect = 1.510e-18 Identity = 42/58 (72.41%), Postives = 51/58 (87.93%), Query Frame = 1
Query: 1 PVSHFNLSAEQSMIVHFLARVGHRFCNGSMEDDKRRLLLNSKGEGWTQADIRSRFKNI 174
PVSHFNLS QSM+VHF+A VGHRFCN +M+DDKR+LLLNSKG+G+ Q+DI+S FK I
Sbjct: 1102 PVSHFNLSPGQSMMVHFIAVVGHRFCNANMKDDKRKLLLNSKGQGYVQSDIKSPFKKI 1159
BLAST of mRNA_P-littoralis_Contig617.67.1 vs. uniprot
Match: A0A6H5K0T8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K0T8_9PHAE) HSP 1 Score: 93.6 bits (231), Expect = 1.870e-18 Identity = 57/161 (35.40%), Postives = 86/161 (53.42%), Query Frame = 3
Query: 180 HWLAIPSFSPHASRSFWASHALNTGQVNAHNVDDFSSYLQVSTATLRAKRLLGPT-PGAHKLGNEV*GRW*MLLGFGRNDRKGAPSRSPRNWVPGGWSSLLMLAPLCRSTAAK-PGYCFVI**SSVKLGSS----EDEKWFAWSQTFFENADYRNFKKFIN 644
HWL I +F PH R+FW++HALN+GQ++ N++DFSS++QVS+ TLR + AH +GNEV G G KGA + L A R++ AK G ++ + ++ ++ E EKWF W TFF +D R F++F++
Sbjct: 606 HWLGISNFGPHVCRTFWSTHALNSGQISGSNLEDFSSFIQVSSTTLRNSYMAAAANTAAHTVGNEVLGAVVNSACTGETTEKGARPYGKKLSA-----RRLEFAGEIRASLAKYSGNGRLLFRALLQKRNASQLAEGEKWFRWENTFFSQSDERLFQRFVD 761
BLAST of mRNA_P-littoralis_Contig617.67.1 vs. uniprot
Match: D8LP31_ECTSI (EsV-1-213 n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LP31_ECTSI) HSP 1 Score: 90.9 bits (224), Expect = 1.600e-17 Identity = 65/184 (35.33%), Postives = 89/184 (48.37%), Query Frame = 3
Query: 126 G*GMDPG*HSVEIQEHRGHWLAIPSFSPHASRSFWASHALNTGQVNAHNVDDFSSYLQVSTATLRAK-RLLGPTPGAHKLGNEV*G-----RW*MLLGFGRNDRKGAPSRSPRNWVPGGWSSLLMLAPLCRSTAAKPG---YCFVI**SSVKLGS-SEDEKWFAWSQTFFENADYRNFKKFING 647
G G P ++ +WL I +FSPH R+FWA+HALN+GQVN+ N+DDFSSYLQVS+ATLR+ AH +GN V G + + + +G R R L LA + S G + F K+G E EKWF TF+++ R F +F+ G
Sbjct: 617 GEGWTPNDTRSRFKKIGAYWLGIENFSPHVCRTFWATHALNSGQVNSSNIDDFSSYLQVSSATLRSSYAAASANTAAHTIGNVVLGGVVNSACRVEIAENGDGPQGPKLRKIR---------LEFLADIRASLLKYSGDAKHMFQDLVRKRKVGQLGESEKWFRKENTFWKDEHERVFLRFVGG 791
BLAST of mRNA_P-littoralis_Contig617.67.1 vs. uniprot
Match: A0A6H5JVT4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JVT4_9PHAE) HSP 1 Score: 90.9 bits (224), Expect = 1.780e-17 Identity = 65/185 (35.14%), Postives = 90/185 (48.65%), Query Frame = 3
Query: 123 EG*GMDPG*HSVEIQEHRGHWLAIPSFSPHASRSFWASHALNTGQVNAHNVDDFSSYLQVSTATLRAKR-LLGPTPGAHKLGNEV*G-----RW*MLLGFGRNDRKGAPSRSPRNWVPGGWSSLLMLAPLCRSTAAKPG---YCFVI**SSVKLGS-SEDEKWFAWSQTFFENADYRNFKKFING 647
+G G P ++ +WL I +FSPH R+FWA+HALN+GQVN+ N+DDFSSYLQVS+ATLR+ AH +GN V G + + + +G R R L LA + S G + F K+G E EKWF TF+++ R F +F+ G
Sbjct: 598 KGEGWTPNDTRSRFKKIGAYWLGIENFSPHVCRTFWATHALNSGQVNSSNIDDFSSYLQVSSATLRSSYGAASANTAAHTIGNVVLGGVVNSACHVEIAENGDGPQGPKLRKIR---------LEFLADIRASLLKYSGDAKHMFQDLVRKRKVGQLGESEKWFRKENTFWKDEHERVFLRFVGG 773
BLAST of mRNA_P-littoralis_Contig617.67.1 vs. uniprot
Match: D7FL01_ECTSI (EsV-1-213 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FL01_ECTSI) HSP 1 Score: 88.2 bits (217), Expect = 1.270e-16 Identity = 63/160 (39.38%), Postives = 82/160 (51.25%), Query Frame = 3
Query: 183 WLAIPSFSPHASRSFWASHALNTGQVNAHNVDDFSSYLQVSTATLRAKRL-LGPTPGAHKLGNEV*GRW*MLLGFGRNDRKGA-PSRSPRNWVPGGWSSLLMLAPLCRSTAAKPG----YCFVI**SSVKLGS-SEDEKWFAWSQTFFENADYRNFKKFI 641
WL I F PHA RSF+A+HALNTGQV NV++FSS+LQVS+ATLR + G AH LG+EV G G ++GA P N S L R++ K G F + G ++DEKWF + TFF R F++F+
Sbjct: 457 WLGIQKFCPHACRSFYATHALNTGQVTPANVENFSSFLQVSSATLRNSYMSAGAHTAAHTLGSEVLGSVVNAACTGATTKEGAAPYGKKLN------SRRLEFVEQIRASLVKYGGNGRLMFRDLVQKREAGRLADDEKWFRFDSTFFSEKKERLFQRFL 610
BLAST of mRNA_P-littoralis_Contig617.67.1 vs. uniprot
Match: Q8QN77_ESV1K (EsV-1-213 n=2 Tax=root TaxID=1 RepID=Q8QN77_ESV1K) HSP 1 Score: 87.0 bits (214), Expect = 3.410e-16 Identity = 41/58 (70.69%), Postives = 45/58 (77.59%), Query Frame = 1
Query: 1 PVSHFNLSAEQSMIVHFLARVGHRFCNGSMEDDKRRLLLNSKGEGWTQADIRSRFKNI 174
PVSHFNLS QSM+VHF+A VGHRFCN M+D KR+LLLNSKG G Q DI S FK I
Sbjct: 567 PVSHFNLSPGQSMMVHFIAVVGHRFCNADMKDSKRKLLLNSKGRGCVQNDINSPFKKI 624
BLAST of mRNA_P-littoralis_Contig617.67.1 vs. uniprot
Match: D7FZG9_ECTSI (EsV-1-213 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZG9_ECTSI) HSP 1 Score: 86.7 bits (213), Expect = 4.270e-16 Identity = 40/58 (68.97%), Postives = 46/58 (79.31%), Query Frame = 1
Query: 1 PVSHFNLSAEQSMIVHFLARVGHRFCNGSMEDDKRRLLLNSKGEGWTQADIRSRFKNI 174
PVSHFNLS QSM+VHF+A VGHRFC+ M+D KR+LLLNSKG G+ Q DI S FK I
Sbjct: 377 PVSHFNLSPGQSMMVHFIAVVGHRFCDADMKDSKRKLLLNSKGRGYVQNDINSPFKKI 434
BLAST of mRNA_P-littoralis_Contig617.67.1 vs. uniprot
Match: B2KWI6_ECTSI (EsV-1-213-like protein 2 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=B2KWI6_ECTSI) HSP 1 Score: 81.3 bits (199), Expect = 3.320e-14 Identity = 57/186 (30.65%), Postives = 87/186 (46.77%), Query Frame = 3
Query: 102 KKAASQFEG*GMDPG*HSVEIQEHRGHWLAIPSFSPHASRSFWASHALNTGQVNAHNVDDFSSYLQVSTATLRAKRLLGP-TPGAHKLGNEV*GRW*MLLGFGRNDRKGAPSRSPRNWVPGGWSSLLMLAPLCRSTAAKPGYCFVI**SSVKLGSS----EDEKWFAWSQTFFENADYRNFKKFIN 644
K +S+F+ GM WL I +F PH RSFW++HAL++GQV+A N+++FSS+LQVS++TLR + AH +GN+V G G KG + L + S A G + ++ ++ + E WF W TFF D R F++F++
Sbjct: 619 KDVSSRFKRIGMQ--------------WLGIQNFGPHVCRSFWSTHALSSGQVSASNLENFSSFLQVSSSTLRNSYMSATGNSAAHTVGNQVLGAVVNAACTGETTEKGTRPYGKKLSA----RRLEFAGEIRASLARFQGNGRRLFREMLQKRNASQLGDTETWFRWENTFFCEGDERLFQRFLD 786 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig617.67.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 14
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig617.67.1 >prot_P-littoralis_Contig617.67.1 ID=prot_P-littoralis_Contig617.67.1|Name=mRNA_P-littoralis_Contig617.67.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=75bp MIVHFLARVGHRFCNGSMEDDKRRLLLNSKGEGWTQADIRSRFKNIEDIGback to top mRNA from alignment at P-littoralis_Contig617:174130..174782- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig617.67.1 ID=mRNA_P-littoralis_Contig617.67.1|Name=mRNA_P-littoralis_Contig617.67.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=653bp|location=Sequence derived from alignment at P-littoralis_Contig617:174130..174782- (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig617:174130..174782- >mRNA_P-littoralis_Contig617.67.1 ID=mRNA_P-littoralis_Contig617.67.1|Name=mRNA_P-littoralis_Contig617.67.1|organism=Pylaiella littoralis U1_48|type=CDS|length=225bp|location=Sequence derived from alignment at P-littoralis_Contig617:174130..174782- (Pylaiella littoralis U1_48)back to top |