mRNA_P-littoralis_Contig613.35.2 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig613.35.2
Unique NamemRNA_P-littoralis_Contig613.35.2
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
BLAST of mRNA_P-littoralis_Contig613.35.2 vs. uniprot
Match: D7G8N5_ECTSI (Methylcrotonoyl-CoA carboxylase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8N5_ECTSI)

HSP 1 Score: 885 bits (2287), Expect = 2.800e-314
Identity = 468/599 (78.13%), Postives = 502/599 (83.81%), Query Frame = 2
Query:  302 MSRVAARRAAAAARGHVISSSPPSLRFPTLRGALDVPAETALKSKEAMAEMVDKLRSKLKMVEAGGGDVASKRHKGRGKLLARERIEALVDPATPFLELAPLAGYEASDRGGDDGGIMCGGVVAGIGRVEGLECMIVANDATVKGGTYFPITVKKHLRAQEVARENRLPCIYMVDSGGAFLPKQAEVFPDKDHFGRIFFNQANMSAEGIPQIAVVMGVCTAGGAYVPAMSDESVIVNGTGTVFLAGPPLVRAATGEVISAEELGGADAHTRVSGVADHFAEDDEHAISITRSIIANLNLGTITNPAAAVEA-------------------DGDGPAAVAPQQWDEPLFDPREMGSIIPTDPKKPFDVRKVIARLLDGSRFHEFKERYGPTMVTGFGHLYGQSVGIVANNGVLFSESALKAAHFVELCCQRGIPIIFLQNVTGFMVGKRYEHQGIAKDGAKLVTAVSCAKVPKITCVIGGSYGAGNYGMCGRSYSPRFLFMWPNARISVMGAEQAANVLAQVETDKRERRGEKLREDEEAKIKDPILEKFERESSAYYSSSRLWDDGVIEPADTRKVLGLSLRVATKDAAPPTSFGVFRM 2041
            MSR+A R A AAARG+  SS    +RFP L G LDVPA+TAL+S+ AM EMVD+LRS L  VEAGGGD+A KRH  +GKLLARERIEA+VDP +PFLELAPLAGY        D GI+ GG VAGIGRVEG+ECMI+ANDAT+KGGTY+PITVKKHLRAQEVA+ENRLPCIY+VDSGGAFLPKQAEVFPDK+HFGRIFFNQANMSA GIPQ+AVVMG+CTAGGAYVPAMSDE+VIVNGTGTVFLAGPP  +             G+D   R+SGVADHFAEDDE AISI RSI+AN NL + TNP+  V A                      G    A QQWDEPLFDPREMGSIIPTD KKPFDVRKVIARL+DGSRFHEFKERYG TMVTGFGHLYGQSVGIVANNGVLFSESALKAAHFVELCCQRGIPIIFLQN+TGFMVGKRYEHQGIAKDGAKLV AVSCAKVPKITCVIGGSYGAGNYGMCGR+YSPRFLFMWPNARISVMG EQAANVLAQVE DKRER GE L E+EEAKIKDPIL KFERESS YYSSSRLWDDGVI+PADTRKVLGL+L VATKDAAPPTSFGVFRM
Sbjct:    1 MSRLA-RGARAAARGYASSS----MRFPKLNGDLDVPAKTALESRLAMQEMVDELRSALATVEAGGGDLARKRHSAKGKLLARERIEAIVDPGSPFLELAPLAGY--------DEGIISGGAVAGIGRVEGVECMILANDATIKGGTYYPITVKKHLRAQEVAQENRLPCIYLVDSGGAFLPKQAEVFPDKEHFGRIFFNQANMSAAGIPQVAVVMGICTAGGAYVPAMSDETVIVNGTGTVFLAGPPTRQ-------------GSD---RLSGVADHFAEDDEDAISIARSIVANFNLPSATNPSQRVAAMNAAXXXXXXXXXXXXXXXXXXGATTAAEQQWDEPLFDPREMGSIIPTDSKKPFDVRKVIARLVDGSRFHEFKERYGTTMVTGFGHLYGQSVGIVANNGVLFSESALKAAHFVELCCQRGIPIIFLQNITGFMVGKRYEHQGIAKDGAKLVAAVSCAKVPKITCVIGGSYGAGNYGMCGRAYSPRFLFMWPNARISVMGGEQAANVLAQVEKDKRERSGETLGEEEEAKIKDPILNKFERESSPYYSSSRLWDDGVIDPADTRKVLGLTLHVATKDAAPPTSFGVFRM 570          
BLAST of mRNA_P-littoralis_Contig613.35.2 vs. uniprot
Match: A0A835Z7I2_9STRA (Methylcrotonoyl-CoA carboxylase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z7I2_9STRA)

HSP 1 Score: 742 bits (1916), Expect = 6.120e-259
Identity = 373/533 (69.98%), Postives = 437/533 (81.99%), Query Frame = 2
Query:  443 MAEMVDKLRSKLKMVEAGGGDVASKRHKGRGKLLARERIEALVDPATPFLELAPLAGYEASDRGGDDGGIMCGGVVAGIGRVEGLECMIVANDATVKGGTYFPITVKKHLRAQEVARENRLPCIYMVDSGGAFLPKQAEVFPDKDHFGRIFFNQANMSAEGIPQIAVVMGVCTAGGAYVPAMSDESVIVNGTGTVFLAGPPLVRAATGEVISAEELGGADAHTRVSGVADHFAEDDEHAISITRSIIANLNLGTITNPAAAVEADGDGPAAVAPQQWDEPLFDPREMGSIIPTDPKKPFDVRKVIARLLDGSRFHEFKERYGPTMVTGFGHLYGQSVGIVANNGVLFSESALKAAHFVELCCQRGIPIIFLQNVTGFMVGKRYEHQGIAKDGAKLVTAVSCAKVPKITCVIGGSYGAGNYGMCGRSYSPRFLFMWPNARISVMGAEQAANVLAQVETDKRERRGEKLREDEEAKIKDPILEKFERESSAYYSSSRLWDDGVIEPADTRKVLGLSLRVATKDAAPPTSFGVFRM 2041
            M  +V  L  +L     GGG+ A +RHKGRGKLLARERIEA++D  TPFLEL+PLAG + S  G DD  +  GGVV G+G V G++C+IVANDATVKGGTY+PITVKKHLRAQEVA  N LPC+Y+VDSGGAFLP QA+VFPD+DHFGRIF+NQANMSA G+PQ+AVVMG CTAGGAYVPAMSDE+VIV GTGT+FL GPPLV+AATGE ++AE+LGGAD H  +SGVADH+AEDD HA+ I R I+A LN      P AA        AA A   +DEPL+ P +MG+++P DPK+PFDVRKV+AR+LDGSRF EFK R+G T+VTGFGHLYGQ VGIVANNGVLFSESALKAAHFVELCCQRG+P++FLQN+TGFMVG+++E++GIAK GAK+VTAV+CAKVPKITCVIGGSYGAGNYGMCGRS SPRFLFMWPNARI VMGAEQAANVL QVE DKR  +G  L  +EEA +K P+L +   ESSAYYSS+RLWDDGVI+P DTR+VLG+S+  A +    PT FGVFRM
Sbjct:    1 MDALVADLNRRLAKAMQGGGEAAIRRHKGRGKLLARERIEAVLDAGTPFLELSPLAGGD-SMYGKDD--VAAGGVVTGVGVVSGVKCVIVANDATVKGGTYYPITVKKHLRAQEVALANALPCLYLVDSGGAFLPMQADVFPDRDHFGRIFYNQANMSAAGVPQVAVVMGSCTAGGAYVPAMSDETVIVRGTGTIFLGGPPLVKAATGEEVAAEDLGGADVHCSISGVADHYAEDDAHALEIARGIVAGLNA-----PGAA--------AASAAAAYDEPLYGPHDMGAVVPVDPKRPFDVRKVLARVLDGSRFSEFKARFGTTIVTGFGHLYGQQVGIVANNGVLFSESALKAAHFVELCCQRGVPLVFLQNITGFMVGRKHENEGIAKHGAKMVTAVACAKVPKITCVIGGSYGAGNYGMCGRSMSPRFLFMWPNARIGVMGAEQAANVLTQVEKDKRAAKGLALSPEEEAAMKAPLLSRLGAESSAYYSSARLWDDGVIDPRDTRRVLGMSVAAAMQAPPEPTKFGVFRM 517          
BLAST of mRNA_P-littoralis_Contig613.35.2 vs. uniprot
Match: A0A8K1CHG8_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CHG8_PYTOL)

HSP 1 Score: 725 bits (1871), Expect = 2.880e-251
Identity = 365/551 (66.24%), Postives = 432/551 (78.40%), Query Frame = 2
Query:  389 LRGALDVPAETALKSKEAMAEMVDKLRSKLKMVEAGGGDVASKRHKGRGKLLARERIEALVDPATPFLELAPLAGYEASDRGGDDGGIMCGGVVAGIGRVEGLECMIVANDATVKGGTYFPITVKKHLRAQEVARENRLPCIYMVDSGGAFLPKQAEVFPDKDHFGRIFFNQANMSAEGIPQIAVVMGVCTAGGAYVPAMSDESVIVNGTGTVFLAGPPLVRAATGEVISAEELGGADAHTRVSGVADHFAEDDEHAISITRSIIANLNLGTITNPAAAVEADGDGPAAVAPQQWDEPLFDPREMGSIIPTDPKKPFDVRKVIARLLDGSRFHEFKERYGPTMVTGFGHLYGQSVGIVANNGVLFSESALKAAHFVELCCQRGIPIIFLQNVTGFMVGKRYEHQGIAKDGAKLVTAVSCAKVPKITCVIGGSYGAGNYGMCGRSYSPRFLFMWPNARISVMGAEQAANVLAQVETDKRERRGEKLREDEEAKIKDPILEKFERESSAYYSSSRLWDDGVIEPADTRKVLGLSLRVATKDAAPPTSFGVFRM 2041
            L G L+  +E   +S   M  +  +LRS++  V  GGG+ A +RH  RGKLL R+RI++L+DP +PFLE+APLA Y+    GGD   +   G+V GIGRV G+ECMI+ NDATVKGGTYFP+TVKKHLRAQE+A ENRLPCIY+VDSGGAFLP QAE+FPD+DHFGR FFNQANMSA+GIPQIAVVMG CTAGGAYVPAM DESVIV   GTVFL GPPLV+AATGEV++ EELGGAD H R SGV DH A +D HA+ ITR I++NLN     +P            AV     +EPL+ P E+G IIP D +KPFDVRKVIAR++DGS+F EFK+ YG T+VTGF  LYG  VGI+ANNG+LFSES++KAAHF+ELC QRGIP++FLQN+TGFMVGK+ EH GIAKDGAKLVTAVSCAKVPKITC+IGGSYGAGNYGMCGR++SPRFL+MWPNARISVMG EQAA VLAQV+ D  ER G+   ++EE   K P LEK+E ESSAYYS++RLWDDG+I+P DTRK+LGLSL  A  +    T FGVFRM
Sbjct:   41 LDGKLNTKSEQFQESMAHMEALTQELRSRIAKVRLGGGEKARERHMSRGKLLVRDRIDSLLDPGSPFLEIAPLAAYDM--YGGD---VPAAGIVTGIGRVNGIECMILGNDATVKGGTYFPLTVKKHLRAQEIAMENRLPCIYLVDSGGAFLPLQAEIFPDRDHFGREFFNQANMSAQGIPQIAVVMGSCTAGGAYVPAMCDESVIVQKNGTVFLGGPPLVKAATGEVVTPEELGGADVHCRTSGVTDHLAHNDHHALEITRRIVSNLNYQK--HP------------AVTQVPIEEPLYSPEELGGIIPVDSRKPFDVRKVIARIVDGSKFDEFKQHYGTTIVTGFARLYGNPVGIIANNGILFSESSVKAAHFIELCTQRGIPLLFLQNITGFMVGKKAEHGGIAKDGAKLVTAVSCAKVPKITCIIGGSYGAGNYGMCGRAFSPRFLYMWPNARISVMGGEQAAGVLAQVQRDNIERAGKTWSQEEEDAFKKPTLEKYEHESSAYYSTARLWDDGIIDPKDTRKILGLSLSAALNEEPKETKFGVFRM 572          
BLAST of mRNA_P-littoralis_Contig613.35.2 vs. uniprot
Match: A0A024TF50_9STRA (Methylcrotonoyl-CoA carboxylase n=10 Tax=Aphanomyces TaxID=100860 RepID=A0A024TF50_9STRA)

HSP 1 Score: 723 bits (1865), Expect = 1.680e-250
Identity = 360/551 (65.34%), Postives = 435/551 (78.95%), Query Frame = 2
Query:  389 LRGALDVPAETALKSKEAMAEMVDKLRSKLKMVEAGGGDVASKRHKGRGKLLARERIEALVDPATPFLELAPLAGYEASDRGGDDGGIMCGGVVAGIGRVEGLECMIVANDATVKGGTYFPITVKKHLRAQEVARENRLPCIYMVDSGGAFLPKQAEVFPDKDHFGRIFFNQANMSAEGIPQIAVVMGVCTAGGAYVPAMSDESVIVNGTGTVFLAGPPLVRAATGEVISAEELGGADAHTRVSGVADHFAEDDEHAISITRSIIANLNLGTITNPAAAVEADGDGPAAVAPQQWDEPLFDPREMGSIIPTDPKKPFDVRKVIARLLDGSRFHEFKERYGPTMVTGFGHLYGQSVGIVANNGVLFSESALKAAHFVELCCQRGIPIIFLQNVTGFMVGKRYEHQGIAKDGAKLVTAVSCAKVPKITCVIGGSYGAGNYGMCGRSYSPRFLFMWPNARISVMGAEQAANVLAQVETDKRERRGEKLREDEEAKIKDPILEKFERESSAYYSSSRLWDDGVIEPADTRKVLGLSLRVATKDAAPPTSFGVFRM 2041
            L G ++  ++  ++S E M  +  +L+++L +V  GGG+ A  +H  RGKLLAR+RI++LVDP + FLEL+PLA   A D  G    +   G++ GIGR+ G+ECMI+ANDATVKGGTYFP+TVKKHLRAQE+ARENRLPCIYMVDSGGA+LP QAE+FPDK+HFGR F+NQANMSA GIPQIAVVMG CTAGGAYVPAMSDESVIV G GTVFL GPPLV+AATGEV++AEELGGAD H R SGV DH A++D HAI I R I++NLN  +  N                  + +EP+FDP E+G IIP D +KPFDVRKVIAR++DGS+F EFK+ YG T+VTGF  LYG+ +GI+ANNG+LFSES++KAAHF+ELCCQR IP++FLQN+TGFMVGK+ EH GIAKDGAKLVTAVSCA VPK+TC+IGGSYGAGNYGMCGR++SPRFL+MWPNA+ISVMG EQAA VLA V+ D  ER G+    +EEA  K P L+K+E ESSAYYSS+RLWDDG+I+P DTRKVLGLS   A  +   PT FGVFRM
Sbjct:   28 LDGKINTKSKDFVESIERMNTLTSELKTRLDVVRLGGGEAARSKHVARGKLLARDRIDSLVDPGSAFLELSPLA---AHDMYGTP--VPAAGIITGIGRIHGVECMILANDATVKGGTYFPMTVKKHLRAQEIARENRLPCIYMVDSGGAYLPLQAEIFPDKEHFGREFYNQANMSAAGIPQIAVVMGSCTAGGAYVPAMSDESVIVQGNGTVFLGGPPLVKAATGEVVTAEELGGADVHCRTSGVTDHLAKNDAHAIEIVRRIVSNLNWTSKANANVTQSLT----------EVEEPVFDPAELGGIIPVDGRKPFDVRKVIARIVDGSKFDEFKQHYGTTIVTGFARLYGRPIGIIANNGILFSESSVKAAHFIELCCQRQIPLLFLQNITGFMVGKKAEHGGIAKDGAKLVTAVSCANVPKVTCIIGGSYGAGNYGMCGRAFSPRFLYMWPNAKISVMGGEQAAGVLATVQRDNMERAGKTWSAEEEAAFKQPTLDKYEVESSAYYSSARLWDDGIIDPKDTRKVLGLSFSAALNELPTPTKFGVFRM 563          
BLAST of mRNA_P-littoralis_Contig613.35.2 vs. uniprot
Match: K3X1F2_GLOUD (Methylcrotonoyl-CoA carboxylase n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3X1F2_GLOUD)

HSP 1 Score: 721 bits (1862), Expect = 2.670e-250
Identity = 366/569 (64.32%), Postives = 442/569 (77.68%), Query Frame = 2
Query:  335 AARGHVISSSPPSLRFPTLRGALDVPAETALKSKEAMAEMVDKLRSKLKMVEAGGGDVASKRHKGRGKLLARERIEALVDPATPFLELAPLAGYEASDRGGDDGGIMCGGVVAGIGRVEGLECMIVANDATVKGGTYFPITVKKHLRAQEVARENRLPCIYMVDSGGAFLPKQAEVFPDKDHFGRIFFNQANMSAEGIPQIAVVMGVCTAGGAYVPAMSDESVIVNGTGTVFLAGPPLVRAATGEVISAEELGGADAHTRVSGVADHFAEDDEHAISITRSIIANLNLGTITNPAAAVEADGDGPAAVAPQQWDEPLFDPREMGSIIPTDPKKPFDVRKVIARLLDGSRFHEFKERYGPTMVTGFGHLYGQSVGIVANNGVLFSESALKAAHFVELCCQRGIPIIFLQNVTGFMVGKRYEHQGIAKDGAKLVTAVSCAKVPKITCVIGGSYGAGNYGMCGRSYSPRFLFMWPNARISVMGAEQAANVLAQVETDKRERRGEKLREDEEAKIKDPILEKFERESSAYYSSSRLWDDGVIEPADTRKVLGLSLRVATKDAAPPTSFGVFRM 2041
            A+   V+SS P ++    L G L+  +E   +S   M  +  +L++++  +  GGG+ A  RH  RGKLL R+RI++L+D  +PFLEL+PLA Y+  D     G +   G+V GIGR+ G+ECMI+ NDATVKGGTYFP+TVKKHLRAQE+A ENRLPC+Y+VDSGGAFLPKQA++FPD+DHFGR F+NQANMSA GIPQIAVVMG CTAGGAYVPAMSDESVIV G GTVFL GPPLV+AATGEV++ EELGGAD H R SGV DHFA +D HA+ ITR II+NLN      P            +VA    +EPLF P E+G IIP D +KPFDVRKVIAR++DGS+F EFK+ YG T+VTGF  LYG  VGI+ANNG+LFSES++KAAHF+ELC QRGIP++FLQN+TGFMVGK+ EH GIAKDGAK+V AVSCAKVPKITC+IGGSYGAGNYGMCGR++SPRFL+MWPNARISVMG EQAA VLAQV+ D  ER G+    +EEA  K P L+K+E+ESSAY+S++RLWDDG+I+P DTRKVLGLSL  A  + A  T FGVFRM
Sbjct:    2 ASHAGVLSSVPSNV----LDGKLNTKSEQFKESLVHMDALTAELKARVAKIRLGGGEKARDRHVSRGKLLVRDRIDSLLDRDSPFLELSPLAAYDMYD-----GQVPSAGIVTGIGRINGIECMILGNDATVKGGTYFPLTVKKHLRAQEIAMENRLPCVYLVDSGGAFLPKQADIFPDRDHFGREFYNQANMSAAGIPQIAVVMGSCTAGGAYVPAMSDESVIVKGNGTVFLGGPPLVKAATGEVVTPEELGGADVHCRTSGVTDHFANNDHHALEITRRIISNLNY--TKQP------------SVAQAPIEEPLFSPEELGGIIPVDARKPFDVRKVIARIVDGSKFDEFKKYYGTTIVTGFAKLYGNPVGIIANNGILFSESSVKAAHFIELCSQRGIPLLFLQNITGFMVGKKAEHGGIAKDGAKMVMAVSCAKVPKITCIIGGSYGAGNYGMCGRAFSPRFLYMWPNARISVMGGEQAAGVLAQVQRDNLERAGKTWTAEEEAAFKQPTLDKYEKESSAYFSTARLWDDGIIDPKDTRKVLGLSLSAALNEHAQETKFGVFRM 547          
BLAST of mRNA_P-littoralis_Contig613.35.2 vs. uniprot
Match: A0A485LV68_9STRA (Methylcrotonoyl-CoA carboxylase n=2 Tax=Aphanomyces TaxID=100860 RepID=A0A485LV68_9STRA)

HSP 1 Score: 719 bits (1856), Expect = 1.260e-248
Identity = 357/561 (63.64%), Postives = 435/561 (77.54%), Query Frame = 2
Query:  359 SSPPSLRFPTLRGALDVPAETALKSKEAMAEMVDKLRSKLKMVEAGGGDVASKRHKGRGKLLARERIEALVDPATPFLELAPLAGYEASDRGGDDGGIMCGGVVAGIGRVEGLECMIVANDATVKGGTYFPITVKKHLRAQEVARENRLPCIYMVDSGGAFLPKQAEVFPDKDHFGRIFFNQANMSAEGIPQIAVVMGVCTAGGAYVPAMSDESVIVNGTGTVFLAGPPLVRAATGEVISAEELGGADAHTRVSGVADHFAEDDEHAISITRSIIANLNLGTITNPAAAVEADGDGPAAVAPQQWDEPLFDPREMGSIIPTDPKKPFDVRKVIARLLDGSRFHEFKERYGPTMVTGFGHLYGQSVGIVANNGVLFSESALKAAHFVELCCQRGIPIIFLQNVTGFMVGKRYEHQGIAKDGAKLVTAVSCAKVPKITCVIGGSYGAGNYGMCGRSYSPRFLFMWPNARISVMGAEQAANVLAQVETDKRERRGEKLREDEEAKIKDPILEKFERESSAYYSSSRLWDDGVIEPADTRKVLGLSLRVATKDAAPPTSFGVFRM 2041
            S P ++    L G ++  ++  L S E M  +  +L+S+L +V  GGG+ A  +H  RGK+L R+RI++L+DP +PFLEL+PLA Y+          +   G+V GIGR+ G+ECMI+ NDATVKGGTYFP+TVKKHLRAQE+ARENRLPC+YMVDSGGAFLP QAE+FPDK+HFGR F+NQA MSA GIPQIAVVMG CTAGGAYVPAM DESVIV G GTVFLAGPPLV+AATGEV++AEELGGAD H R SGV DH A+DD HAI I R I++NLN      PA  +               +EP FDP E+G +IP D +KPFDVRKVIAR++DGS+F EFK+ YG T+VTGF  LYG+ +GI+ANNG+LFSES++KAAHF+ELCCQR IP++FLQN+TGFMVGK+ EH GIAKDGAKLVTAVSCA VPK+TC+IGGSYGAGNYGMCGR++SPRFL+MWPNA+ISVMG EQAA VLA V+ D  ER G+   +++EA  K P L+K+E ESS+YYS++RLWDDG+I+P DTRKVLGLS   A  +   PT FGVFRM
Sbjct:   55 SLPYAVASNVLDGKINAKSKDFLDSMERMNGLTSELKSRLDVVRLGGGESARAKHVSRGKMLVRDRIDSLIDPGSPFLELSPLAAYDMYGTS-----VPAAGIVTGIGRINGVECMILGNDATVKGGTYFPMTVKKHLRAQEIARENRLPCVYMVDSGGAFLPLQAEIFPDKEHFGREFYNQATMSAAGIPQIAVVMGSCTAGGAYVPAMCDESVIVQGNGTVFLAGPPLVKAATGEVVTAEELGGADVHCRTSGVTDHLAKDDAHAIDIVRRIVSNLNWQK--TPAQTLTL------------VEEPRFDPAELGGLIPVDARKPFDVRKVIARIVDGSKFDEFKQHYGTTIVTGFARLYGRPIGIIANNGILFSESSVKAAHFIELCCQRQIPLLFLQNITGFMVGKKAEHGGIAKDGAKLVTAVSCASVPKVTCIIGGSYGAGNYGMCGRAFSPRFLYMWPNAKISVMGGEQAAGVLATVQRDNLERAGKTWSDEDEAAFKKPTLDKYEVESSSYYSTARLWDDGIIDPKDTRKVLGLSFSAALNETPSPTKFGVFRM 596          
BLAST of mRNA_P-littoralis_Contig613.35.2 vs. uniprot
Match: H3G9Y1_PHYRM (Methylcrotonoyl-CoA carboxylase n=22 Tax=Peronosporaceae TaxID=4777 RepID=H3G9Y1_PHYRM)

HSP 1 Score: 716 bits (1847), Expect = 8.800e-248
Identity = 356/551 (64.61%), Postives = 430/551 (78.04%), Query Frame = 2
Query:  389 LRGALDVPAETALKSKEAMAEMVDKLRSKLKMVEAGGGDVASKRHKGRGKLLARERIEALVDPATPFLELAPLAGYEASDRGGDDGGIMCGGVVAGIGRVEGLECMIVANDATVKGGTYFPITVKKHLRAQEVARENRLPCIYMVDSGGAFLPKQAEVFPDKDHFGRIFFNQANMSAEGIPQIAVVMGVCTAGGAYVPAMSDESVIVNGTGTVFLAGPPLVRAATGEVISAEELGGADAHTRVSGVADHFAEDDEHAISITRSIIANLNLGTITNPAAAVEADGDGPAAVAPQQWDEPLFDPREMGSIIPTDPKKPFDVRKVIARLLDGSRFHEFKERYGPTMVTGFGHLYGQSVGIVANNGVLFSESALKAAHFVELCCQRGIPIIFLQNVTGFMVGKRYEHQGIAKDGAKLVTAVSCAKVPKITCVIGGSYGAGNYGMCGRSYSPRFLFMWPNARISVMGAEQAANVLAQVETDKRERRGEKLREDEEAKIKDPILEKFERESSAYYSSSRLWDDGVIEPADTRKVLGLSLRVATKDAAPPTSFGVFRM 2041
            L GAL+V +    +S   MA++  +LR ++     GGG+ A  RH+ RGK+  R+RI++L+DP +PFLEL+PLA Y+        GG+   G+V G+GR+ G+ECMI+ NDATVKGGTYFP+TVKKHLRAQE+A+ENRLPC+Y+VDSGGAFLP QA++FPD++HFGR F+NQA MSA GIPQIAVVMG CTAGGAYVPAMSDESVIV G GTVFL GPPLV+AATGEV++ EELGGAD H R SGV DH+A +D HA+ ITR I++NLN                   AV     +EPL+ P E+G +IP D +KPFDVRKVIAR++DGSRF EFK+ YG T+VTGF  LYG  VGIVANNG+LFSES++KAAHF+ELC QRGIP++FLQN+TGFMVGK+ EH GIAKDGAK+V AVS AKVPK+TC+IGGSYGAGNYGMCGR++SPRFL+MWPNARISVMG EQAA VLAQV+ D  ERR E    +EEA  K PIL+K+E ESSAYYS++RLWDDG+I+P DTRKVLGLSL  A  +    T FGVFRM
Sbjct:   32 LDGALNVKSAQFQESLAHMAKLTSELRERVAHARQGGGEAARARHESRGKMPVRDRIDSLLDPGSPFLELSPLAAYDMYG-----GGVPSAGIVTGVGRINGVECMILGNDATVKGGTYFPLTVKKHLRAQEIAQENRLPCVYLVDSGGAFLPLQADIFPDREHFGREFYNQATMSAMGIPQIAVVMGSCTAGGAYVPAMSDESVIVKGNGTVFLGGPPLVKAATGEVVTPEELGGADVHCRTSGVTDHYANNDAHALDITRRIVSNLNYRK--------------QPAVTQTPIEEPLYSPDELGGVIPVDSRKPFDVRKVIARIVDGSRFDEFKKEYGSTIVTGFARLYGNPVGIVANNGILFSESSVKAAHFIELCSQRGIPLLFLQNITGFMVGKKAEHGGIAKDGAKMVMAVSNAKVPKLTCIIGGSYGAGNYGMCGRAFSPRFLYMWPNARISVMGGEQAAGVLAQVQRDNYERRKESWSAEEEAAFKQPILDKYEHESSAYYSTARLWDDGIIDPKDTRKVLGLSLSAALNEEPKETKFGVFRM 563          
BLAST of mRNA_P-littoralis_Contig613.35.2 vs. uniprot
Match: A0A5D6Y6J6_9STRA (Methylcrotonoyl-CoA carboxylase n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6Y6J6_9STRA)

HSP 1 Score: 714 bits (1844), Expect = 3.450e-247
Identity = 365/575 (63.48%), Postives = 440/575 (76.52%), Query Frame = 2
Query:  317 ARRAAAAARGHVISSSPPSLRFPTLRGALDVPAETALKSKEAMAEMVDKLRSKLKMVEAGGGDVASKRHKGRGKLLARERIEALVDPATPFLELAPLAGYEASDRGGDDGGIMCGGVVAGIGRVEGLECMIVANDATVKGGTYFPITVKKHLRAQEVARENRLPCIYMVDSGGAFLPKQAEVFPDKDHFGRIFFNQANMSAEGIPQIAVVMGVCTAGGAYVPAMSDESVIVNGTGTVFLAGPPLVRAATGEVISAEELGGADAHTRVSGVADHFAEDDEHAISITRSIIANLNLGTITNPAAAVEADGDGPAAVAPQQWDEPLFDPREMGSIIPTDPKKPFDVRKVIARLLDGSRFHEFKERYGPTMVTGFGHLYGQSVGIVANNGVLFSESALKAAHFVELCCQRGIPIIFLQNVTGFMVGKRYEHQGIAKDGAKLVTAVSCAKVPKITCVIGGSYGAGNYGMCGRSYSPRFLFMWPNARISVMGAEQAANVLAQVETDKRERRGEKLREDEEAKIKDPILEKFERESSAYYSSSRLWDDGVIEPADTRKVLGLSLRVATKDAAPPTSFGVFRM 2041
            A+R A A+   V++ +     F  L G L+  +    +S   M  +  +LR+++  V  GGG+ A  RH  RGK+L R+RI++L+D  +PFLEL+PLA Y+  D   DD  +   G+V GIGR+ G+ECMI+ NDATVKGGTYFP+TVKKHLRAQE+A+ENRLPC+Y+VDSGGAFLPKQAE+FPD+DHFGR F+NQA MSA GIPQIAVVMG CTAGGAYVPAMSDESVIV GTGTVFL GPPLVRAATGEV++ E LGGAD H R SGV DH A  D HA++ITR I+ANLN+  +  P            AVA    +EP F P E+G ++P D +KPFDVR VIAR++DGSRF EFK+ YGPT+VTGF  LYG  VGIVANNG+LFSESA+KAAHF+ELC QRGIP++FLQN+TGFMVG + EH GIAKDGAK+V AV+CAKVPK+TC+IGGSYGAGNYGMCGR++SPRFL+MWPNARI+VMG EQAA VLAQV+ D   R G +    EEA  K P L+ FERESSAY+S++RLWDDGVI+P DTR+VLGLSL  A  + A  T FGVFRM
Sbjct:   21 AQRVAMASHAGVLNEAD----FNVLDGKLNTRSPEFRESLAHMDALTAELRARVAKVRLGGGEKARARHVARGKMLVRDRIDSLLDRDSPFLELSPLAAYDVYD---DD--VPSAGIVTGIGRIHGVECMILGNDATVKGGTYFPLTVKKHLRAQEIAQENRLPCVYLVDSGGAFLPKQAEIFPDRDHFGREFYNQATMSAAGIPQIAVVMGSCTAGGAYVPAMSDESVIVRGTGTVFLGGPPLVRAATGEVVTPEALGGADVHCRTSGVTDHLAHSDAHALAITRRIVANLNV--VKQP------------AVAQAVIEEPRFSPDELGGVVPVDARKPFDVRHVIARIVDGSRFDEFKQHYGPTIVTGFARLYGNPVGIVANNGILFSESAVKAAHFIELCAQRGIPLLFLQNITGFMVGSKAEHGGIAKDGAKMVMAVACAKVPKLTCIIGGSYGAGNYGMCGRAFSPRFLYMWPNARIAVMGGEQAAGVLAQVQRDNHARAGREWTAAEEAAFKQPTLDTFERESSAYFSTARLWDDGVIDPRDTRRVLGLSLSAAMNEHAQETKFGVFRM 572          
BLAST of mRNA_P-littoralis_Contig613.35.2 vs. uniprot
Match: A0A662XVW0_9STRA (Methylcrotonoyl-CoA carboxylase n=11 Tax=Peronosporaceae TaxID=4777 RepID=A0A662XVW0_9STRA)

HSP 1 Score: 713 bits (1841), Expect = 8.190e-247
Identity = 357/551 (64.79%), Postives = 429/551 (77.86%), Query Frame = 2
Query:  389 LRGALDVPAETALKSKEAMAEMVDKLRSKLKMVEAGGGDVASKRHKGRGKLLARERIEALVDPATPFLELAPLAGYEASDRGGDDGGIMCGGVVAGIGRVEGLECMIVANDATVKGGTYFPITVKKHLRAQEVARENRLPCIYMVDSGGAFLPKQAEVFPDKDHFGRIFFNQANMSAEGIPQIAVVMGVCTAGGAYVPAMSDESVIVNGTGTVFLAGPPLVRAATGEVISAEELGGADAHTRVSGVADHFAEDDEHAISITRSIIANLNLGTITNPAAAVEADGDGPAAVAPQQWDEPLFDPREMGSIIPTDPKKPFDVRKVIARLLDGSRFHEFKERYGPTMVTGFGHLYGQSVGIVANNGVLFSESALKAAHFVELCCQRGIPIIFLQNVTGFMVGKRYEHQGIAKDGAKLVTAVSCAKVPKITCVIGGSYGAGNYGMCGRSYSPRFLFMWPNARISVMGAEQAANVLAQVETDKRERRGEKLREDEEAKIKDPILEKFERESSAYYSSSRLWDDGVIEPADTRKVLGLSLRVATKDAAPPTSFGVFRM 2041
            L GAL+V ++   +S+  M  +  +LR ++     GGG+ A  RH  RGK+  R+RI+ L+D  +PFLEL+PLA       G   GG+   G+V GIGR+ G+ECMI+ANDATVKGGTYFP+TVKKHLRAQE+A+ENRLPC+Y+VDSGGAFLP QA++FPD+DHFGR F+NQANMSA GIPQIAVVMG CTAGGAYVPAMSDESVIV G GTVFL GPPLV+AATGEV++ EELGGAD H R SGV DHFA +D HA+ ITR I++NLN                   +V     +EPLF P E+G +IP D +KPFDVRKVIAR++DGSRF EFK+ YGPT+VTGF  LYG  VGI+ANNG+LFSES++KAAHF+ELC QRG+P++FLQN+TGFMVGK+ EH GIAKDGAK+V AV+ AKVPKITC+IGGSYGAGNYGMCGR++SPRFL+MWPNARISVMG EQAA VLAQV+ D  +RR E    +EEA  K PIL+K+E ESSAYYS++RLWDDG+I+P DTRKVLGLSL  A  +    T FGVFRM
Sbjct:   36 LDGALNVKSKEFRESQARMEALTAELRERVAAARQGGGESARARHVMRGKMPVRDRIDTLLDAGSPFLELSPLAA-----DGVYKGGVPAAGIVTGIGRISGVECMILANDATVKGGTYFPLTVKKHLRAQEIAQENRLPCVYLVDSGGAFLPLQADIFPDRDHFGREFYNQANMSAMGIPQIAVVMGSCTAGGAYVPAMSDESVIVKGNGTVFLGGPPLVKAATGEVVTGEELGGADVHCRTSGVTDHFANNDAHALDITRRIVSNLNYRK--------------QPSVTQTPIEEPLFSPDELGGVIPVDSRKPFDVRKVIARIVDGSRFDEFKQLYGPTVVTGFARLYGNPVGIIANNGILFSESSVKAAHFIELCSQRGVPLLFLQNITGFMVGKKAEHGGIAKDGAKMVMAVANAKVPKITCIIGGSYGAGNYGMCGRAFSPRFLYMWPNARISVMGGEQAAGVLAQVQRDNYDRRNESWSAEEEAAFKQPILDKYEHESSAYYSTARLWDDGIIDPKDTRKVLGLSLSAALNEEPKETKFGVFRM 567          
BLAST of mRNA_P-littoralis_Contig613.35.2 vs. uniprot
Match: A0A4D9CUE1_9STRA (Methylcrotonoyl-CoA carboxylase n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CUE1_9STRA)

HSP 1 Score: 711 bits (1834), Expect = 1.530e-246
Identity = 360/533 (67.54%), Postives = 426/533 (79.92%), Query Frame = 2
Query:  443 MAEMVDKLRSKLKMVEAGGGDVASKRHKGRGKLLARERIEALVDPATPFLELAPLAGYEASDRGGDDGGIMCGGVVAGIGRVEGLECMIVANDATVKGGTYFPITVKKHLRAQEVARENRLPCIYMVDSGGAFLPKQAEVFPDKDHFGRIFFNQANMSAEGIPQIAVVMGVCTAGGAYVPAMSDESVIVNGTGTVFLAGPPLVRAATGEVISAEELGGADAHTRVSGVADHFAEDDEHAISITRSIIANLNLGTITNPAAAVEADGDGPAAVAPQQWDEPLFDPREMGSIIPTDPKKPFDVRKVIARLLDGSRFHEFKERYGPTMVTGFGHLYGQSVGIVANNGVLFSESALKAAHFVELCCQRGIPIIFLQNVTGFMVGKRYEHQGIAKDGAKLVTAVSCAKVPKITCVIGGSYGAGNYGMCGRSYSPRFLFMWPNARISVMGAEQAANVLAQVETDKRERRGEKLREDEEAKIKDPILEKFERESSAYYSSSRLWDDGVIEPADTRKVLGLSLRVATKDAAPPTSFGVFRM 2041
            M ++VD+L   L+ V  GGG++A  +H+ RGKL  RERIE LVDP TPFLEL+PLAG E     G D  +  GG+V GIGRV G+ECM+VANDATVKGGTY+PITVKKHLRAQE+A +N+LPCIY+VDSGGAFLP+Q EVFPD+DHFGRIFFNQANMSA GIPQIAVVMG CTAGGAYVPAMSDES+IV G+GT+FL GPPLV+AATGEV+SAE+LGGAD H R SGV DH+A DD HA+ ITRSI+A+LN+      A +      GP       ++EPL+ P E+G ++P DPK+PFDVR VIAR++DGSRF EFK  YGPT+VTGF  ++G   GIVANNG+LFSESALKAAHF+ELC QR IP++FLQN+TGFMVG++YE++GIAK+GAKLVTAVS +KVPKIT +I GSYGAGNYGMCGR++SPRFLFMWPNA+ISVMG EQAANVLA V       +G+     EE+  K PIL KF +ESS YYSS+RLWDDGVI P DTR+VLGL L VA K+ A  T FGVFRM
Sbjct:    1 MDKLVDRLDGILEEVYQGGGELARSKHEQRGKLYVRERIERLVDPGTPFLELSPLAGRELY---GQDK-VPAGGIVTGIGRVAGVECMLVANDATVKGGTYYPITVKKHLRAQEIASQNKLPCIYLVDSGGAFLPRQDEVFPDRDHFGRIFFNQANMSAAGIPQIAVVMGSCTAGGAYVPAMSDESIIVKGSGTIFLGGPPLVKAATGEVVSAEDLGGADVHCRTSGVVDHYATDDLHALDITRSIVASLNVPEARTAAFSPNGKTGGP-------YEEPLYSPDELGGLVPLDPKRPFDVRSVIARVVDGSRFQEFKALYGPTIVTGFARIHGILTGIVANNGILFSESALKAAHFIELCSQRHIPLVFLQNITGFMVGRKYENEGIAKNGAKLVTAVSTSKVPKITLLIAGSYGAGNYGMCGRAFSPRFLFMWPNAKISVMGGEQAANVLATVAA-----QGKDWTSAEESAFKAPILAKFSKESSCYYSSARLWDDGVIRPRDTRRVLGLGLAVAVKEQAERTQFGVFRM 517          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig613.35.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G8N5_ECTSI2.800e-31478.13Methylcrotonoyl-CoA carboxylase n=1 Tax=Ectocarpus... [more]
A0A835Z7I2_9STRA6.120e-25969.98Methylcrotonoyl-CoA carboxylase n=1 Tax=Tribonema ... [more]
A0A8K1CHG8_PYTOL2.880e-25166.24Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A024TF50_9STRA1.680e-25065.34Methylcrotonoyl-CoA carboxylase n=10 Tax=Aphanomyc... [more]
K3X1F2_GLOUD2.670e-25064.32Methylcrotonoyl-CoA carboxylase n=1 Tax=Globispora... [more]
A0A485LV68_9STRA1.260e-24863.64Methylcrotonoyl-CoA carboxylase n=2 Tax=Aphanomyce... [more]
H3G9Y1_PHYRM8.800e-24864.61Methylcrotonoyl-CoA carboxylase n=22 Tax=Peronospo... [more]
A0A5D6Y6J6_9STRA3.450e-24763.48Methylcrotonoyl-CoA carboxylase n=1 Tax=Pythium br... [more]
A0A662XVW0_9STRA8.190e-24764.79Methylcrotonoyl-CoA carboxylase n=11 Tax=Peronospo... [more]
A0A4D9CUE1_9STRA1.530e-24667.54Methylcrotonoyl-CoA carboxylase n=1 Tax=Nannochlor... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig613contigP-littoralis_Contig613:120015..126808 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D7G8N5
PFAMsCarboxyl_trans
Model size2878
Max annot lvl2759|Eukaryota
KEGG rclassRC00367,RC00942
KEGG koko:K01969
KEGG ReactionR04138
KEGG Pathwayko00280,ko01100,map00280,map01100
KEGG ModuleM00036
Hectar predicted targeting categorymitochondrion
Exons7
Evalue0.0
EggNOG OGsCOG4799@1|root,KOG0540@2759|Eukaryota
EC6.4.1.4
DescriptionCoA carboxylase activity
Cds size1743
COG categoryI
BRITEko00000,ko00001,ko00002,ko01000
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig613.35.2prot_P-littoralis_Contig613.35.2Pylaiella littoralis U1_48polypeptideP-littoralis_Contig613 120316..125974 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791278.8128502-UTR-P-littoralis_Contig613:120014..1203151680791278.8128502-UTR-P-littoralis_Contig613:120014..120315Pylaiella littoralis U1_48UTRP-littoralis_Contig613 120015..120315 +
1680791278.918846-UTR-P-littoralis_Contig613:125974..1268081680791278.918846-UTR-P-littoralis_Contig613:125974..126808Pylaiella littoralis U1_48UTRP-littoralis_Contig613 125975..126808 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791278.8257608-CDS-P-littoralis_Contig613:120315..1207951680791278.8257608-CDS-P-littoralis_Contig613:120315..120795Pylaiella littoralis U1_48CDSP-littoralis_Contig613 120316..120795 +
1680791278.840078-CDS-P-littoralis_Contig613:121473..1216151680791278.840078-CDS-P-littoralis_Contig613:121473..121615Pylaiella littoralis U1_48CDSP-littoralis_Contig613 121474..121615 +
1680791278.850036-CDS-P-littoralis_Contig613:122388..1225781680791278.850036-CDS-P-littoralis_Contig613:122388..122578Pylaiella littoralis U1_48CDSP-littoralis_Contig613 122389..122578 +
1680791278.8603168-CDS-P-littoralis_Contig613:123543..1237811680791278.8603168-CDS-P-littoralis_Contig613:123543..123781Pylaiella littoralis U1_48CDSP-littoralis_Contig613 123544..123781 +
1680791278.8739355-CDS-P-littoralis_Contig613:124321..1245461680791278.8739355-CDS-P-littoralis_Contig613:124321..124546Pylaiella littoralis U1_48CDSP-littoralis_Contig613 124322..124546 +
1680791278.890383-CDS-P-littoralis_Contig613:124922..1251501680791278.890383-CDS-P-littoralis_Contig613:124922..125150Pylaiella littoralis U1_48CDSP-littoralis_Contig613 124923..125150 +
1680791278.9032152-CDS-P-littoralis_Contig613:125734..1259741680791278.9032152-CDS-P-littoralis_Contig613:125734..125974Pylaiella littoralis U1_48CDSP-littoralis_Contig613 125735..125974 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig613.35.2

>prot_P-littoralis_Contig613.35.2 ID=prot_P-littoralis_Contig613.35.2|Name=mRNA_P-littoralis_Contig613.35.2|organism=Pylaiella littoralis U1_48|type=polypeptide|length=581bp
MSRVAARRAAAAARGHVISSSPPSLRFPTLRGALDVPAETALKSKEAMAE
MVDKLRSKLKMVEAGGGDVASKRHKGRGKLLARERIEALVDPATPFLELA
PLAGYEASDRGGDDGGIMCGGVVAGIGRVEGLECMIVANDATVKGGTYFP
ITVKKHLRAQEVARENRLPCIYMVDSGGAFLPKQAEVFPDKDHFGRIFFN
QANMSAEGIPQIAVVMGVCTAGGAYVPAMSDESVIVNGTGTVFLAGPPLV
RAATGEVISAEELGGADAHTRVSGVADHFAEDDEHAISITRSIIANLNLG
TITNPAAAVEADGDGPAAVAPQQWDEPLFDPREMGSIIPTDPKKPFDVRK
VIARLLDGSRFHEFKERYGPTMVTGFGHLYGQSVGIVANNGVLFSESALK
AAHFVELCCQRGIPIIFLQNVTGFMVGKRYEHQGIAKDGAKLVTAVSCAK
VPKITCVIGGSYGAGNYGMCGRSYSPRFLFMWPNARISVMGAEQAANVLA
QVETDKRERRGEKLREDEEAKIKDPILEKFERESSAYYSSSRLWDDGVIE
PADTRKVLGLSLRVATKDAAPPTSFGVFRM*
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mRNA from alignment at P-littoralis_Contig613:120015..126808+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig613.35.2 ID=mRNA_P-littoralis_Contig613.35.2|Name=mRNA_P-littoralis_Contig613.35.2|organism=Pylaiella littoralis U1_48|type=mRNA|length=6794bp|location=Sequence derived from alignment at P-littoralis_Contig613:120015..126808+ (Pylaiella littoralis U1_48)
TCCTCCTCCGCCTTTCTGCCCCTCCTTTGATCTCCTCTGTTGTTCTTTGT ATAATATTCATAGGAGGCGAGCGCTTTTAGTATCTAGACATCCTGGTTTG ACGATCTTTAGAAATCTTGCCTCTGAGTTCAACCTTGAACATCTGCCTTG TAGTCGAAGAGAGTCAGCTCTCTTCGAGACAGAGAGACAGAGAGATCGTA AAGTAGACAAGGAAGGACAAAAAAAGCCCACTGGAGTTGTAAAATCTTCA CTGCTGTTGCCAGTGGAGATAGGACGCACACCGTAAGACCAAGGCTGCAA AATGTCGCGAGTCGCAGCAAGGAGAGCAGCAGCAGCCGCGAGGGGGCATG TTATATCTTCATCACCGCCGTCGTTGCGCTTTCCGACCCTTCGCGGCGCG CTCGACGTGCCTGCCGAAACGGCCCTCAAGAGCAAAGAGGCCATGGCCGA AATGGTCGACAAACTTCGCTCGAAGCTAAAGATGGTGGAGGCCGGGGGCG GAGACGTCGCCAGCAAGAGGCACAAGGGCAGGGGCAAGCTCCTCGCGAGG GAGAGGATAGAAGCGCTCGTGGACCCGGCCACGCCGTTTCTGGAGCTCGC GCCCCTGGCAGGGTACGAGGCTTCTGATCGCGGCGGCGATGACGGCGGGA TCATGTGCGGGGGGGTCGTCGCCGGGATCGGGAGGGTCGAGGGTCTTGAG TGCATGATCGTGGCCAACGATGCCACAGTGAAGGGAGGCACGTACTTCCC GATCACGGTGAAGAAACACTTGAGGGCTCAGGTGAGAGTGGAAGCGTTGT TTCGTTCAGAAGGATACAGACCAGCCCGGTTCGTCGAAGAAAAATAAACA CATCGGTGAAGAAAGTCAGACGGAGATTTTCTTACCGTGTACCAGGTATA GATGAACAGAGCCCCCAGTACTTTACTACTGACTCCGCATTGTGGGAGGA AAGGGGGACAGTCTGGTTGGGCCAGTGCTGGCGCTCTGGGCCACTACGCT CCCCGGCCTCGCAAGCAGGCCAAACGAAACAAGTGCAAGAAAAGCGGGAA AACAGGTACTGGCCTTTTGCATTCGTGCAAGCAATGCCCTCTGGCCGTTT GCCATAAATGCAAGCTAAACCCCGTGTAAAAGCTTTTGAGCACCCCATGC AATAGGCGTTGGGTACGGACTGTAAGCCTTTGGCCTCTTGTAAGAAACTC TGCCTGAGCCTGAATTTCAGTTTTTTACTGTGATAGCAGACGGTATCATA CCGCTGTACTGTACATACACATAAATCTTGTCCGGGTGTAAGTGTGTGTC TACAGGCGGTTGCACCTTCCCTCTCACTCCTTACAGGTGCACGTCGTCTG AACGTATGATACGATTCTGGGAGAACCACTTTGAAGTAAGTCGTCGCACG ATCCCTTACCTCGCCTCCTTGTGTGCGACCCCTACGTTCGGCGTCCGCGC GGGATGCAGGAAGTAGCTCGGGAGAACCGGCTGCCGTGTATCTACATGGT TGATAGCGGCGGGGCATTCCTACCGAAGCAGGCCGAAGTTTTCCCCGACA AGGACCACTTCGGCAGGATTTTCTTTAACCAAGCCAACATGTCCGCGGAA GGTGCGCACTAGGTGCAAAAACACAAAGACAAACACACACACACACACGC ACAAAATTTTTGTACTCTGGACACCACAGAAGCTACGCCAACGGTACCAT TTCTATTTTTTGTTGGTGTGACCATCGTATTTTTCAATTTTTATTTTTTA TTTTCCTCCTGGCACGATACGTGTCTGGTTTGTAACCACGGGCTAGACTT TGGTGTTGAGCTAATGTGAGAATCATCAGCAACATCAACACACACAAGAG GAGAGACGCCGCTTTCTGTCTACCGGTACGCATGCACCGCCTGGACCTCC CACCATACGGGAAACAGATCCGAGTTTTTTATTGTCCCGATCCTTACTAA TCATTTATGTTTGCTGTTTTGTTTGTTTCTGTTGCTCCGTTCATGTACTC TGAATACTCTGAATGTTGTGGTTGTTTCCCTTTGTTTGTCGCCACTGCTG CAAGCAACTCCTGTCTCCCTCGCAACGCGCGTAATTTCCAATTGAGCCCC GGGACCAAATTATACTCTTGACAAAACCCTGGTACTGCTGTAACGTACCG CTTGTAACGTGCGTCTTCGCAAACAGCCCAGGCCGTGGTTGCAGATGGCT GCTTGTGTTACAGTTCACACAGGAAGATGCGGAAACAATGGGCGAAACCG TTACTGCTGTAAATAATTTGTTCGGCCACTTCCCCCCAAAACTCACCGAC CTTTCATTCTCACCCCCCCCCCATCTCCTCCCTCCCCACTTCCCAACGAA ACGGCGCGACACACGAAACGGCAGGAATCCCGCAAATTGCCGTCGTTATG GGGGTCTGTACTGCCGGCGGGGCTTACGTCCCTGCGATGTCGGATGAATC GGTGATCGTGAATGGGACCGGAACCGTGTTCTTGGCCGGGCCGCCACTCG TGAGAGCCGCTACCGGCGAGGTGATATCGGCCGAAGAGCTGGGGGGGGCC GATGCACACACGAGGTGGGTGAGAAGAGGGGGAATGCGCTGCGGTAAAAC GACATGACGTTAGGTGCAAGTAACGGTTGTATGGCAGGCTGAGGAGGGGA CGCGCACGCAGCGCGCACACTCCCCACTGACACTCACACACATACACACA CGCACCACGAGTGGTTATAGGTGGGGCGGGGGGAGACTAAACATGATGTT GTAGTCGAATGGGATACCTGTAGTCGGACGGGTACCTGCTGGTAGTCGCA GTGTTAGTTCAGTTTTTTTCACATCACGGATGACAGTATGGTGGAAGGCG TACTTGTTTCTTCTTCGTCCTTTTTTTTTGTACCCTTCCTTTTACTTTCT GCGTGTTTTCGGATGTTCCTTGGGCTAGGCACACATTTGTGACCACTTGC TACATCGATCCTGGCGATGAAGCTTATGTGAGAATCAACAACACACACAC ACACCACCCACACCCACGCGAAAGTTAGTTGGGTAGGGCACGAGAGTCAG AGTCGGAAAATACCTGGGTGAATGACTTCGGATGCGAGGTACGAGCAAGG GGTAAGAGGGGAGGGGGGGGGCTTTAGTTCAGAGGAAAAGGTGAGAGGGT CAGACGAGCTTTCATGCTCTCGGCTATTGGCGTGGGAATGGAGGGGGGCT TTTGGTAAAGGTCTCGCTGATTGGTTGAAGGGGTCGATCGAAACAAACAT CCCTTGATTAATGAACCCGAAATCGTGAAGGTTTTGGCGCCGTCAGGAGT TTGGAGGACAGAGTACAGACCCTTGTGTCTGCTACGTGGTCCTGTTAGCA CAATGTTACATGGGCACAACTGGTGTGTCAATAAGTCACAGCGCACTTTC GCTGCAAGGGCTCTTGCATGCATCGCTCGAGACACATTCCACATGATCAT ATCTATTTTCTTCACACTGTGTCGCCGCCTCCCGACGCGTAAGAAAAAAA CGCCCTTGGTTTTGTGTTCACCCGGGCAGGGTGTCGGGCGTGGCAGACCA TTTTGCAGAAGACGACGAACACGCGATTTCCATCACCCGAAGCATTATCG CGAACCTCAACCTCGGGACTATCACGAACCCCGCCGCAGCCGTTGAAGCC GATGGCGACGGACCGGCGGCGGTTGCGCCGCAGCAATGGGATGAGCCGCT CTTTGATCCCCGAGAAATGGGGAGCATTATCCCCACGGACCCGAAGAAGC CCTTTGACGTTCGGAAGGTGAGGTACACTAGTAGTAGTGGTAGACTTGAC CGGAAAAACGGACGGAACGAGACTGAGACGGAGAGAAGGGACGGGCAATC GAGGGGACATCGGGAGCTACTGTAGTTGTGCATGCTCCTGCGGCGAGGGC ATAGTGCTTGATAAATCACGCATGCTGCTTCATTTTTTCTCCGTCAGCTC GTTCTCACTCCTGCGCTTGTTCCGGCACCAGCATCTTTCCGTTGCTCTCT CTCCAACTTTACAATTTTTAGCGGCGACCGATCGATGCCTTGGTTTTTAA GTTGTTTTGGCGAGAAGGGAAGGATATTTTGCGCTGGTTTGGTCAGCGGG CATCTGAGCTTCCGCGTCCGCCTCCGCCGACCTCGAAAACTTCCATCTAT CATGCAAGAAATGTTCATATACAACTCGTTCTGTCTGCGTGTTTGTTTGT ATTCCAAACCTTGGGTGACGGCATCCGTCTAATTCCAACTTACCAACCCT CTGACCTCAATCGAAACGCCCCTTTGTGCACCTATTTCTATGATTCACAA TTGGCAGGTCATTGCGCGGTTGCTCGACGGCAGCCGTTTCCACGAGTTCA AGGAGCGTTACGGACCTACGATGGTCACGGGCTTCGGACACCTGTACGGG CAGAGCGTGGGGATCGTGGCCAACAACGGGGTGCTCTTCTCGGAGTCGGC CTTGAAGGCGGCGCACTTCGTCGAGCTGTGCTGCCAGAGAGGCATTCCGA TCATTTTTCTACAAAATGTTACCGGGTTCATGGTGGGTGGTAGGCGTGTA GGCGGTGGGTGCTTTTTCACCAGCCGGGTGGTGGTGGACGTGCTGGTTTT ATGTGAACCACCACGGGCAGCGTGGTGAGTAAGGTACGATGCAGGATCCG AGCGTTGTGTTGCTGGTCGGCGGTGTAGGGGCGAAAGTGATACGGCGCCA CAAGTTGTTTTGCTGGGTGGACGACTCCTGTGCTGCTTGGTTCACATGCG GCGCAGAAAGTGACGTTCTTGCAGAGGAATGGATAACCCCTGCCCATGCC CGTAAAACCCGAGGTTCTCCGCCCCGGCTAAGACGGGGTGCGGGGGATAC GTGGTATCATGTTACTGCCTTGCGTGACCGAATCTAATCTCCCCTCCCTA CAAAGTAGGTGGGGAAGCGGTATGAGCACCAGGGAATTGCCAAGGACGGT GCCAAGCTCGTGACAGCGGTCTCTTGCGCGAAAGTGCCCAAGATAACCTG CGTCATCGGCGGGAGCTACGGGGCGGGAAACTACGGCATGTGCGGCAGGT CATACTCACCCCGCTTCCTCTTTATGTGGCCGAACGCTCGGATCTCGGTG ATGGGAGCGGAACAAGCCGCAAACGTTCTGGCGCAGGTGAGAAAGCAAGC ATCTCCTCTCCTGATTTAAGAAGATTAGTGTAGCTTGTGTAATTGGCTCA TGCTAAATTTATTCTACGAGATGTTGTACACGGTAGTTTTTTCAGAATTT TTTTGTTATCATCGGTTCTAGCCATCATGCTCTCCACAAATTCTGTAGGT TTTGGGCGGAAAATTATCCCCCGGGTGTCTCGGCCACTCTTCCGATTGGT TCTCCGACGTTCCAATGCAAGGCGCGGTCTACCATCTAAACGTTGTTTCC TTGTCGTTGGACGTTTGTTTTTCTTCGGCGTTTCAACGAAAAATAAAAGA AGTAAAACAGCGCTGTAGAATAATTTATTCTGGACGACTACGCTTTGTTA AAAATTGACACACATTTGACATGAATGTGCCCCCTTCAGTTGTCGTTCGT TTCTAAGAAGTACTTCGAAGTAGACTAATGAAGACCACTCACCAGTTGAA ACAACCGTCCGGACTTGAAAAGATACTGAGCAGAGGTCGGAATGTTTTTC GCCTTTGAATACAAAGACAACACAGAAGCACACACACGCACACACGCACA CGCGCACATACACACTGCAGGTGGAGACGGACAAGCGAGAACGCCGCGGA GAGAAGCTCCGCGAGGACGAAGAAGCCAAGATCAAGGACCCGATACTGGA AAAGTTCGAAAGAGAGAGCTCCGCGTACTACTCGAGCTCGCGGCTGTGGG ACGACGGCGTGATCGAACCTGCCGACACTAGGAAAGTACTGGGGCTGAGC CTTCGTGTGGCGACCAAGGACGCGGCTCCGCCCACGTCATTTGGGGTGTT CAGGATGTAGTTTCTTTGGTTGCACCCTTCAAGAAAATTGTCCAGCACGT ACCCGCTTTCCTGGTTGGATGAGCTCGAACATTCTCCATCTACTTTTATT TGATTGGATCCGTAGTTGAGGGTGAAATTCAGCTGGGTGCAAGTGTGTTC AATTATCTTCTTCGTGTATGTACTGCTGTACAGTATGTGCTCTGTGTTGG TTGGATTGGGGGTTTCAGGTTGTTATTTCATACCAGGTAGATGGTTGGTC GGAGAGGGTGTATCAAGACTAGCTGTATTCGAAGACGTAACGGGAGACCC GTTATTCGGTGGCTTGTTAGCTGGCTGGCCTTAGGCTGAATGTGTACAAA TCGGGAGAGATTGATAAGATCACCTTTATACCACGAACGAGTTCGGGACA TGTCCACTACCAGGATAGGTGATGACGTCAAGTGTGTATAGATGGCGACG AACGAAATAATATATTTTTTACAATCGCCTTCGGGTTGTCAATCAATCGT GGTTGGCCTTATTTTTTTTGTTGCTTTCGGGTGTTTGGAACAAGTGGCCC GCATTGCTGTTGAGCAAGTGAAGCGTAGTGTTCTTTTATGACATAGCACG CGAATGGCTACTACCGCTTGAAAATGCAGAGTCGGGTTCGGTGGGATAAT TTACTTGTGTGGGTTTAGCGCTGCGATGTGAAAGACCGCGGTGGCGCGCC GCAATGTGGAATATCGCGGTAGGGATCTATGCGGTGTACTGCGATAAGCC GCCCCTCAATGTTGATCGGGGATAGGCACGAGTTCGCTCCATCAATTCTG AAAGCCTTAGCCTGACCCTTACCAAATCTCTATCGTTTGCCAAG
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Coding sequence (CDS) from alignment at P-littoralis_Contig613:120015..126808+

>mRNA_P-littoralis_Contig613.35.2 ID=mRNA_P-littoralis_Contig613.35.2|Name=mRNA_P-littoralis_Contig613.35.2|organism=Pylaiella littoralis U1_48|type=CDS|length=1743bp|location=Sequence derived from alignment at P-littoralis_Contig613:120015..126808+ (Pylaiella littoralis U1_48)
ATGTCGCGAGTCGCAGCAAGGAGAGCAGCAGCAGCCGCGAGGGGGCATGT
TATATCTTCATCACCGCCGTCGTTGCGCTTTCCGACCCTTCGCGGCGCGC
TCGACGTGCCTGCCGAAACGGCCCTCAAGAGCAAAGAGGCCATGGCCGAA
ATGGTCGACAAACTTCGCTCGAAGCTAAAGATGGTGGAGGCCGGGGGCGG
AGACGTCGCCAGCAAGAGGCACAAGGGCAGGGGCAAGCTCCTCGCGAGGG
AGAGGATAGAAGCGCTCGTGGACCCGGCCACGCCGTTTCTGGAGCTCGCG
CCCCTGGCAGGGTACGAGGCTTCTGATCGCGGCGGCGATGACGGCGGGAT
CATGTGCGGGGGGGTCGTCGCCGGGATCGGGAGGGTCGAGGGTCTTGAGT
GCATGATCGTGGCCAACGATGCCACAGTGAAGGGAGGCACGTACTTCCCG
ATCACGGTGAAGAAACACTTGAGGGCTCAGGAAGTAGCTCGGGAGAACCG
GCTGCCGTGTATCTACATGGTTGATAGCGGCGGGGCATTCCTACCGAAGC
AGGCCGAAGTTTTCCCCGACAAGGACCACTTCGGCAGGATTTTCTTTAAC
CAAGCCAACATGTCCGCGGAAGGAATCCCGCAAATTGCCGTCGTTATGGG
GGTCTGTACTGCCGGCGGGGCTTACGTCCCTGCGATGTCGGATGAATCGG
TGATCGTGAATGGGACCGGAACCGTGTTCTTGGCCGGGCCGCCACTCGTG
AGAGCCGCTACCGGCGAGGTGATATCGGCCGAAGAGCTGGGGGGGGCCGA
TGCACACACGAGGGTGTCGGGCGTGGCAGACCATTTTGCAGAAGACGACG
AACACGCGATTTCCATCACCCGAAGCATTATCGCGAACCTCAACCTCGGG
ACTATCACGAACCCCGCCGCAGCCGTTGAAGCCGATGGCGACGGACCGGC
GGCGGTTGCGCCGCAGCAATGGGATGAGCCGCTCTTTGATCCCCGAGAAA
TGGGGAGCATTATCCCCACGGACCCGAAGAAGCCCTTTGACGTTCGGAAG
GTCATTGCGCGGTTGCTCGACGGCAGCCGTTTCCACGAGTTCAAGGAGCG
TTACGGACCTACGATGGTCACGGGCTTCGGACACCTGTACGGGCAGAGCG
TGGGGATCGTGGCCAACAACGGGGTGCTCTTCTCGGAGTCGGCCTTGAAG
GCGGCGCACTTCGTCGAGCTGTGCTGCCAGAGAGGCATTCCGATCATTTT
TCTACAAAATGTTACCGGGTTCATGGTGGGGAAGCGGTATGAGCACCAGG
GAATTGCCAAGGACGGTGCCAAGCTCGTGACAGCGGTCTCTTGCGCGAAA
GTGCCCAAGATAACCTGCGTCATCGGCGGGAGCTACGGGGCGGGAAACTA
CGGCATGTGCGGCAGGTCATACTCACCCCGCTTCCTCTTTATGTGGCCGA
ACGCTCGGATCTCGGTGATGGGAGCGGAACAAGCCGCAAACGTTCTGGCG
CAGGTGGAGACGGACAAGCGAGAACGCCGCGGAGAGAAGCTCCGCGAGGA
CGAAGAAGCCAAGATCAAGGACCCGATACTGGAAAAGTTCGAAAGAGAGA
GCTCCGCGTACTACTCGAGCTCGCGGCTGTGGGACGACGGCGTGATCGAA
CCTGCCGACACTAGGAAAGTACTGGGGCTGAGCCTTCGTGTGGCGACCAA
GGACGCGGCTCCGCCCACGTCATTTGGGGTGTTCAGGATGTAG
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