mRNA_P-littoralis_Contig610.21.4 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig610.21.4
Unique NamemRNA_P-littoralis_Contig610.21.4
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
BLAST of mRNA_P-littoralis_Contig610.21.4 vs. uniprot
Match: D7FIR2_ECTSI (TPH domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIR2_ECTSI)

HSP 1 Score: 611 bits (1576), Expect = 1.310e-215
Identity = 352/470 (74.89%), Postives = 394/470 (83.83%), Query Frame = 1
Query:    1 MPVKIERVVLTQAELARIRAKVTKTPETDADARRRYLKILSDERVSHWPNTLEAHRQNKENWKKEQEDIIEAKRRDTDKEEAFLQRQLRAETIKRANDKLYEQTGKMKLLRSNLLYAE---TRNDQIAENAERHVDEEALAAAYHQEIKRQVADGDAKEKSAVDARAAKAKVTAKKQQEQLQEFQTAYIASLVKEKEDGDETQRTAKAAIEAEEEEKQALKIKNRAEMEKMLAANQDLHERKAQRISEELDYMEKCRQQRNVLDRAARARKSLEAKRFNEKQAVRQQMIDKATRELEAAXXXXXXXXXXXXXXXXXXXXXXXXRKIKAREDLRQQIDKSRAIQIRQRAEKGEARRAEDKEIKAYFQHRGSEMDRLEKEEEAARXXXXXXXXXXXXXXXXXXXXXXXXXQAFEAVNHARMLSAQGDEDARFKKIVHGYMDEFDARGQSTYLLHRTLNHKNPEMFPSGNLQL 1401
            MPVK ERVVLTQAEL RIRAKVTKTPETDADARRR+LK+LSDERVSHWPNTLEA RQNKENWKK+QED++EAKRRD DKEEA LQRQ+RAETIKRANDKLYEQTGKMKLLRSNLLYAE   TR +QIAE AERH D +ALAAAYHQE+ R+VA+GDA EK+  DARAAKA+ TA+ QQ+QL+EFQT+YIASLVK KEDGDETQR AKAAIEAEE+EK+ALK+KNRAEMEKML AN+DLH+R+A+RISEEL YMEKCRQQR+VLDRAARARKSLE KRFNEKQA+RQQMIDKATRELEA+              XXXXXXX    K KARE+LR QID+SRAIQIRQRAEK EA+RAEDKEI AYF+ R SEMDRL+KEEEAAR                         QA+E VNHAR ++AQGDED RFKKIVHGY+D+F+A+G+STYLLHRTLNHKNP+MFP+GNL L
Sbjct:    1 MPVKNERVVLTQAELDRIRAKVTKTPETDADARRRHLKVLSDERVSHWPNTLEAQRQNKENWKKQQEDLVEAKRRDVDKEEALLQRQMRAETIKRANDKLYEQTGKMKLLRSNLLYAEVIETRKEQIAEKAERHTDAQALAAAYHQEVIRKVAEGDAAEKATADARAAKARTTARDQQQQLREFQTSYIASLVKAKEDGDETQRAAKAAIEAEEDEKRALKLKNRAEMEKMLTANKDLHQRRAERISEELAYMEKCRQQRDVLDRAARARKSLETKRFNEKQAIRQQMIDKATRELEASRKAEDNKEEKEALQXXXXXXXAAANKTKAREELRLQIDRSRAIQIRQRAEKEEAQRAEDKEINAYFRQRTSEMDRLDKEEEAARLAREKQLRNSQKLQARERNAKDRALQAYETVNHARTIAAQGDEDDRFKKIVHGYIDDFNAKGKSTYLLHRTLNHKNPDMFPAGNLNL 470          
BLAST of mRNA_P-littoralis_Contig610.21.4 vs. uniprot
Match: A0A6H5KEN4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KEN4_9PHAE)

HSP 1 Score: 544 bits (1401), Expect = 1.230e-188
Identity = 316/459 (68.85%), Postives = 356/459 (77.56%), Query Frame = 1
Query:   34 QAELARIRAKVTKTPETDADARRRYLKILSDERVSHWPNTLEAHRQNKENWKKEQEDIIEAKRRDTDKEEAFLQRQLRAETIKRANDKLYEQTGKMKLLRSNLLYAE---TRNDQIAENAERHVDEEALAAAYHQEIKRQVADGDAKEKSAVDARAAKAKVTAKKQQEQLQEFQTAYIASLVKEKEDGDETQRTAKAAIEAEEEEKQALKIKNRAEMEKMLAANQDLHERKAQRISEELDYMEKCRQQRNVLDRAARARKSLEAKRFNEKQAVRQQMIDKATRELEAAXXXXXXXXXXXXXXXXXXXXXXXXRKIKAREDLRQQIDKSRAIQIRQRAEKGEARRAEDKEIKAYFQHRGSEMDRLEKEEEAARXXXXXXXXXXXXXXXXXXXXXXXXXQAFEAVNHARMLSAQGDEDARFKKIVHGYMDEFDARGQSTYLLHRTLNHKNPEMFPSGNLQL 1401
            +AEL RIR+KVTKTPETDADARRR+LK+LSDERVSHWPNTLEA RQNKENWKK+QED++EAKRRD DKEEA LQRQ+RAETIKRANDKLYEQTGKMKLLRSNLLYAE   TR +QIAE AERH D +ALAAAYHQE+ R+V +GDA EK+  DARAAKA+ TA+ QQ QL EFQ                      AAIEAEEEEK+ALK+KNRAEMEKMLA NQDLH+R+A+RISEEL YMEKCR+QR+VLDRAARARKSLEAKRFNEKQA+RQQMIDKATRELEA+                XX       K KARE+LR QIDKSRAIQIRQRAEK EA+RAEDKEI AYF+ R SEMDRL+KEE AAR                         QA+E VNHAR ++AQGDED RFKKIVHGY+D+F+A+G+STYLLHRTL+HKNP+MFP+GNL L
Sbjct:   60 RAELDRIRSKVTKTPETDADARRRHLKVLSDERVSHWPNTLEAQRQNKENWKKQQEDLVEAKRRDVDKEEALLQRQMRAETIKRANDKLYEQTGKMKLLRSNLLYAEVIETRKEQIAEKAERHTDAQALAAAYHQEVIRKVTEGDAAEKATADARAAKARTTARDQQRQLHEFQ----------------------AAIEAEEEEKRALKLKNRAEMEKMLAVNQDLHQRRAERISEELAYMEKCRKQRDVLDRAARARKSLEAKRFNEKQAIRQQMIDKATRELEASRKAEDNKEEREALQQRXXEDDAAASKTKAREELRLQIDKSRAIQIRQRAEKEEAQRAEDKEINAYFRQRTSEMDRLDKEEAAARLAREKQLRNSQKLQARERNAKDRALQAYETVNHARTIAAQGDEDDRFKKIVHGYIDDFNAKGKSTYLLHRTLSHKNPDMFPAGNLNL 496          
BLAST of mRNA_P-littoralis_Contig610.21.4 vs. uniprot
Match: A0A835YVV5_9STRA (TPH domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YVV5_9STRA)

HSP 1 Score: 196 bits (498), Expect = 1.170e-53
Identity = 162/447 (36.24%), Postives = 212/447 (47.43%), Query Frame = 1
Query:   25 VLTQAELARIRAKVTKTPETDADARRRYLKILSDERVSHWPNTLEAHRQNKENWKKEQEDIIEAKRRDTDKEEAFLQRQLRAETIKRANDKLYEQTGKMKLLRSNLLYA---ETRNDQIAENAERHVDEEALAAAYHQEIKRQVADGDAKEKSAVDARAAKAKVTAKKQQEQLQEFQTAYIASLVKEKEDGDETQRTAKAAIEAEEEEKQALKIKNRAEMEKMLAANQDLHERKAQRISEELDYMEKCRQQRNVLDRAARARKSLEAKRFNEKQAVRQQMIDKATRELEAAXXXXXXXXXXXXXXXXXXXXXXXXRKIKAREDLRQQIDKSRAIQIRQRAEKGEARRAEDKEIKAYFQHRGSEMDRLEKEEEAARXXXXXXXXXXXXXXXXXXXXXXXXXQAFEAVNHARMLSAQGDEDARFKKIVHGYMDEFDARGQSTYLLHRTL 1356
            +L++AE+A IRAKV   PETD +ARRR LK LSDERV HWPNTLEA R  K+NWK E+E  +E +R   D+ EA LQRQ+R ETI +AN  LYEQT K+K LRS LLY    ETR  Q+ E   R        AAY ++  R     + +                  Q EQL E +  Y+ASLV E+ +G      A                  RAEMEKM+A N  L E++     +E + +++C ++R  L+  A ARK+LE  RF E+QAVRQ MID+AT EL                           R+   R      I++SRA     RA      R E + IKAY++    E    E+ E A                              +A  HAR+ +   +E  RF      + DE  A G+STY+L R L
Sbjct:    1 MLSRAEVATIRAKVAPPPETDLEARRRELKKLSDERVKHWPNTLEATRMKKQNWKLEKEQRLEEERLQIDRREAELQRQMRLETIAKANAALYEQTDKIKSLRSALLYGDILETRAAQVQEAQARRARSSVRDAAYLEQALRGARAVEERXXXXXXXXXXXXXXXXAVQMEQLSECRDKYVASLVAERAEGARVAAEAAXXXXXXXXXXXXXXXXARAEMEKMMAVNTSLREQREAHAQKEQEELQRCEEERGALNALAAARKALEGLRFQERQAVRQAMIDRATAELLKRSADIDNREEREAKEQRAREDAEAERRRDMRTCEHAAIEESRAQARAARAAAAADARLEGERIKAYYRQCAEEAAHQEEAEAAEALRRNLAVKASQVEQRREARERKALEDERQAAQHARLAAVAEEEKRRFAAAAQVHADELQAHGRSTYMLRRAL 447          
BLAST of mRNA_P-littoralis_Contig610.21.4 vs. uniprot
Match: A0A7S3XWQ0_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XWQ0_HETAK)

HSP 1 Score: 179 bits (453), Expect = 3.630e-47
Identity = 152/462 (32.90%), Postives = 232/462 (50.22%), Query Frame = 1
Query:   22 VVLTQAELARIRAKVTKTPETDADARRRYLKILSDERVSHWPNTLEAHRQNKENWKKEQEDIIEAKRRDTDKEEAFLQRQLRAETIKRANDKLYEQTGKMKLLRSNLLYAET---RNDQIAENAERHVDEEALAAAYHQEIKRQVADGDAKEKSAVDARAAKAKVTAKKQQEQLQEFQTAYIASLVKEKEDGDETQRTAKAAIEAEEEEKQALKIKNRAEMEKMLAANQDLHERKAQRISEELDYMEKCRQQRNVLDRAARARKSLEAKRFNEKQAVRQQMIDKATRELEAAXXXXXXXXXXXXXXXXXXXXXXXXRKIKAREDLRQQIDKSRAIQIRQRAEKGEARRAEDKEIKAYFQHRGSEMDRLEKEEEAARXXXXXXXXXXXXXXXXXXXXXXXXXQAFEAVNHAR----MLSAQGDEDARFKKIVHGYMDEFDARGQSTYLLHRTLNHKNPEMFPS 1386
            VV+T+++L R++ KV  TP +D +ARRR+LK LSD RVS WPNTLEA+R+ KENWK E+E+ IE +R++ D+ EA LQ+++R  TI+ AN  LYEQT +MKLL+S  L AE    R  Q  E  +R   +  L   +H E+ RQ+   + +E  A+  + AKA+     QQEQL+E++  YI  L++EK +G+  +  A+A                R   E+ML +N DL  R+  +++ E    +        ++R   ARK+LE +RF   Q  RQ++ID+AT  L AA                      X  K    +  +Q    SR +Q R R E+ EARR +D      F  R  E +   + EEA                           +A E          +L+A  ++  RF+++V     E +A+G  T ++ + + HK  ++ P+
Sbjct:    4 VVITRSDLQRLKEKVKATPMSDHEARRRHLKALSDNRVSRWPNTLEANRKQKENWKIEKEERIEKERQEIDRREAELQKEMRLLTIQNANKVLYEQTDRMKLLKSRKLLAEVVQEREVQKLEKLQRRKGDVDLELQHHDEMVRQLRLAEDREAQALAKKKAKARAVQADQQEQLEEYKAKYIEGLLEEKAEGERVRARAEADFLEXXXXXXXXXXXARRVAEEMLRSNADLQARREAQLAAEKREQDDREAHLVEVERMKGARKALEVRRFEAGQERRQRLIDRATARLLAAESHEEARLAQAQLDLQAAEDARXAAKXXXAKRQQQLCADSREVQARLRRERAEARRLQD----VAFAQRWREANERTEHEEALERLEVRRQNVAVRDDQLRHAAEKKQARAVEXXXXXXXXXXVLAASEEDARRFERLVEAEAAEMEAQGMPTKMVRKLVGHKGIDIQPA 461          
BLAST of mRNA_P-littoralis_Contig610.21.4 vs. uniprot
Match: A0A7S2FT83_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2FT83_9STRA)

HSP 1 Score: 121 bits (303), Expect = 3.370e-26
Identity = 120/458 (26.20%), Postives = 213/458 (46.51%), Query Frame = 1
Query:   25 VLTQAELARIRAKVTKTPETDADARRRYLKILSDERVSHWPNTLEAHRQNKENWKKEQEDIIEAKRRDTDKEEAFLQRQLRAETIKRANDKLYEQTGKMKLLRSNLLYAET---RNDQIAENAERHVDEEALAAAYHQEIKRQVADGDAKEKSAVDARAAKAKVTAKKQQEQLQEFQTAYIASLVKEKEDGDETQRTAKAAIEAEEEEKQALKIKNRAEMEKMLAANQDLHERKAQRISEELDYMEKCRQQRNVLDRAARARKSLEAKRFNEKQAVRQQMIDKATRELEAAXXXXXXXXXXXXXXXXXXXXXXXXRKIKAREDLRQQIDKSRAIQIRQRAEKGEARRAEDKEIKAYFQHRGSEMDRLEKEEEAARXXXXXXXXXXXXXXXXXXXXXXXXXQAFEAVNHARMLSAQGDEDARFKKIVHGYMDEFDARGQSTYLLHRTLNHKNPEMFPSG 1389
            ++++ EL RI++KV     +  +ARR+ LK LSD+R++ WPNTLEA R  KEN + E+   +E +R+  D++E   QR++R + IKRAN  ++E +GKMK LRS  +  +    R +Q+ E        +A    +HQ     +   + +E+  V+    K K  AK Q +QL++ +  ++  L +EK++G E  + A+  ++AE E+    K++ R   E+M  + QD    K +   ++ +  +K   ++   +  A ARK +E   F EKQ  RQ+MID+A  EL                            K + R+     ID+SR  QIR++A +    +     I  +   +  +M+  E  EE                            +    +N    + A  ++D  ++ +    ++E    G++   L + +N K+  + P+ 
Sbjct:   15 IISRGELNRIKSKVQPGQISSKEARRQQLKKLSDDRLTQWPNTLEATRIKKENRRTEKAAALEIERQKIDRQEQEYQRKVRLDAIKRANTIMHESSGKMKNLRSQQMMTDVMAHREEQLEEKELIKQWRKADEDEHHQRTMENLKLEEEREREEVERMVKKTKDLAKMQGDQLEQAKRGHVERLRREKQEGLEIIKKAEDDLQAEAEKMAEKKMRARLAAEEMKCSGQDSRRLKLELKRQDEEADQKAAIEKQKREEFAVARKEMEKIIFTEKQTSRQKMIDRACEELAKLPAVEQKTYDKQVAEKLAKEDEEVRMKEEWRKRQTDAIDRSRKAQIREKARRDANEKTSALAIAQFQAEQVRQMEDEEALEEVRHRQKRIEVSNSRNAHMEDKKLWREREREQRNLNEQATIRAMQEDDEIYQNVARSVIEEAQRDGKNIAPLLKAMNIKDITLLPAS 472          
BLAST of mRNA_P-littoralis_Contig610.21.4 vs. uniprot
Match: A0A1V9Z7K3_9STRA (TPH domain-containing protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9Z7K3_9STRA)

HSP 1 Score: 119 bits (298), Expect = 1.400e-25
Identity = 129/464 (27.80%), Postives = 214/464 (46.12%), Query Frame = 1
Query:   22 VVLTQAELARIRAKVTKTPETDADARRRYLKILSDERVSHWPNTLEAHRQNKENWKKEQEDIIEAKRRDTDKEEAFLQRQLRAETIKRANDKLYEQTGKMKLLRSNLLYAETRNDQIAENAERHV---DEEALAAAYHQEIKRQVADGDAKEKSAVDARAAKAKVTAKKQQEQLQEFQTAYIASLVKEKEDGDETQRTAKAAIEAEEEEKQALKIKNRAEMEKMLAANQDLHERKAQRISEELDYMEKCRQQRNVLDRAARARKSLEAKRFNEKQAVRQQMIDKATRELEAAXXXXXXXXXXXXXXXXXXXXXXXXRKIKAREDLRQQIDKSRAIQIRQRAEKGEARRAEDKEIKAYFQHRGSEMDRLEKEEEAARXXXXXXXXXXXXXXXXXXXXXXXXXQAFEAVNHARMLSAQGDEDARFKKIVHGYMDEFDARG-QSTYLLHRTLNHKNPEMFPSGNLQL 1401
            V +T+A+LARIR+ V++   T+ +A+R  L+ LS  R + WPNTLEA R+ KENWKK++E+  E +RR  D EEA LQ++ R   I+RAN  LYEQT KMK LRS  L  +   D+  + AE+H     ++ +   +    ++Q+AD +AK+ +    R AK    A  Q+ QL+E++  +IASL +EK DG+  +  A+  +  E E +   K + +   E    AN+ L   +AQ  + EL    +  +              L+ ++   K A + +MID AT  L                           ++   R   ++ ID SRA Q+ ++A K     A  KE    +      ++R    EE  R                         +A   +    +  +Q  E   +       +   +A+G ++T+ L + +  K+ ++ P+G  ++
Sbjct:    3 VTITEADLARIRSNVSEPEVTNREAKRAALRELSQARTNKWPNTLEAMRRKKENWKKDKEEREEDERRKIDLEEARLQKEARTRQIERANRLLYEQTDKMKTLRSKELLNDVLADREFQIAEKHALKAMDQRVEEGWTALERQQLADANAKQAAEDARRHAKFLELAAIQKTQLEEYKNNFIASLREEKTDGERIKAKAEQDLRDELEAEADRKRRTKQANEDTRLANERLKALRAQEKAAELAEDIRREEDAQXXXXXXXXXXXLQREKEARKTAQKMRMIDLATESLLKVELKSEQRLENQKKQVRAKEDSELQQRADRRAAQKRAIDHSRAHQLEEKARKRAEELASAKEQTELWAEYNRNVERALVSEENERRLDNMKLAALQRQQANAKRSLDMEERAASILAEETIKISQHTEQELYTTYAAQVLAAAEAKGVKNTFPLKQAMKAKDIDLLPAGGFRI 466          
BLAST of mRNA_P-littoralis_Contig610.21.4 vs. uniprot
Match: A0A067BQ09_SAPPC (TPH domain-containing protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067BQ09_SAPPC)

HSP 1 Score: 119 bits (297), Expect = 1.900e-25
Identity = 138/476 (28.99%), Postives = 217/476 (45.59%), Query Frame = 1
Query:   22 VVLTQAELARIRAKVTKTPETDADARRRYLKILSDERVSHWPNTLEAHRQNKENWKKEQEDIIEAKRRDTDKEEAFLQRQLRAETIKRANDKLYEQTGKMKLLRSNLLYAETRNDQIAENAERHVDEEALAAAYHQEI--------KRQVADGDAKEKSAVDARAAKAKVTAKKQQEQLQEFQTAYIASLVKEKEDGDETQRTAKAAIEAEEEEKQALKIK----NRAEMEKMLAANQDLHERKAQRISE-ELDYMEKCRQQRNVLDRAARARKSLEAKRFNE--KQAVRQQMIDKATRELEAAXXXXXXXXXXXXXXXXXXXXXXXXRKIKAREDLRQQIDKSRAIQIRQRAEKGEARRAEDKEIKAYFQHRGSEMDRLEKEEEAARXXXXXXXXXXXXXXXXXXXXXXXXXQAFEAVNHARMLSAQGDEDARFKKIVHGYMDEFDARG-QSTYLLHRTLNHKNPEMFPSGNLQL 1401
            V +T+++LARI   V++   T+ +A+R +L+ LS  R + WPNTLEA R+ KENWKK++ED  E +RR  D EEA LQ++ R   I+RAN  LYEQT KMK LRS     E  ND +A+  E  + E+A  AA  + +        + Q+AD DAK+ +    R A+    A  Q+ QL+E++  +IA+L +EK DGD      KA +E +  +           ++   E    AN+ L   KA R+ E EL+Y E  ++                 +R  E  K A + +MID AT  L                            +   R   ++ ID SRA Q+ ++A   +  RA  KE    +      +D+    EE  R                         +A + +    +  +Q  E   + +     +   +ARG ++T+ L + +  KN ++ P+G  ++
Sbjct:    3 VTITESDLARILRNVSEPEVTNREAKRAHLRELSQTRTNKWPNTLEAMRRKKENWKKDKEDREEDERRKVDMEEARLQKEARTRQIERANRLLYEQTDKMKTLRSK----ELLNDVLADR-EFQLAEKAALAAMDKRVEDQWIALERAQLADADAKKAADEARRHAQFLALAANQKTQLEEYKNNFIATLREEKRDGDRI----KAKVEQDNRDXXXXXXXXXXXSKQANEDTRLANERL---KALRVREKELEYQEDLKRXXXXXXXXXXXXXXXXLQRQKEERKTAQKMRMIDLATENLLKVEQKSEARLENQKKEVQLKEDTELKHRADRRAAQKRAIDHSRAHQLSEKARVKDEERASAKEQMVQWAEYNRSVDQALIHEENERRLDNMRLAALQQQQAQAKRSLDMEERAAQILAEETIKISQSTEQELYTQYASQVLSAAEARGVKNTFPLKQAMKAKNIDLLPAGGFRI 466          
BLAST of mRNA_P-littoralis_Contig610.21.4 vs. uniprot
Match: A0A5D6Y2N9_9STRA (TPH domain-containing protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6Y2N9_9STRA)

HSP 1 Score: 115 bits (289), Expect = 2.230e-24
Identity = 85/240 (35.42%), Postives = 141/240 (58.75%), Query Frame = 1
Query:   28 LTQAELARIRAKVTKTPETDADARRRYLKILSDERVSHWPNTLEAHRQNKENWKKEQEDIIEAKRRDTDKEEAFLQRQLRAETIKRANDKLYEQTGKMKLLRSNLLYAET---RNDQIAENAERHVDEEALAAAYHQEIKRQVADGDAKEKSAVDARAAKAKVTAKKQQEQLQEFQTAYIASLVKEKEDGDETQRTAKAAIEAEEEEKQALKIKNRAEMEKMLAANQDLHERKAQRISEE 738
            LT  EL RI A V+   ++D +A+R  +K  S++R + WPNTLEA R+ K+ WKK++E+  E  R+  D+EEA LQR+ R + I+RAN  LYEQT +MK LRS  L A+    R  Q+ E       +  +   Y +++  +V  G+ +EK+    +  + +  A+ Q++QL+E++  YI+ L +EK DG+ T+  A+  +  E+E ++A K++ R   E+   AN  L   +  ++ +E
Sbjct:    6 LTSDELERILASVSAPTQSDREAKRLAIKAKSEQRTAQWPNTLEAMRKKKDRWKKDKEEREEEARKKIDEEEAQLQREARTKQIERANHLLYEQTDRMKTLRSKQLLADVVHHRTLQVEEKTMLDEQDRLVDFVYDRQVLAKVLQGEEEEKAERKRKQLEHEKLARVQKQQLEEYKERYISELREEKRDGERTKEKAEQDLRDEQERERARKLRLRQAGEETQLANMRLKAHREVQLEQE 245          
BLAST of mRNA_P-littoralis_Contig610.21.4 vs. uniprot
Match: W4GU32_9STRA (TPH domain-containing protein n=9 Tax=Aphanomyces astaci TaxID=112090 RepID=W4GU32_9STRA)

HSP 1 Score: 112 bits (280), Expect = 3.430e-23
Identity = 92/243 (37.86%), Postives = 141/243 (58.02%), Query Frame = 1
Query:   28 LTQAELARIRAKVTKTPETDADARRRYLKILSDERVSHWPNTLEAHRQNKENWKKEQEDIIEAKRRDTDKEEAFLQRQLRAETIKRANDKLYEQTGKMKLLRSNLLYAETRND---QIAENAERHVDEEALAAAYHQEIKRQVADGDAKEKSAVDARAAKAKVTAKKQQEQLQEFQTAYIASLVKEKEDGDETQRTAKAAIEAEEEEKQALKIKNRAEM--EKMLAANQDLHERKAQRISEEL 741
            L ++EL RIR  ++   +++ +A+R++LK LS +R   WPNTLEA R+ KENWKK++E+  EA+R   D+EE  LQ++ R + I+RAN  LYEQT +MK LRS  L A+   D   QI E  E    ++ +   +   +  Q+ D D K       R  K K     QQ+QL+E++ ++IA+L +E  DG+  +  AKA  +A +EE+  L  K R +   E M  AN+ L+  + Q   +E+
Sbjct:    5 LNESELDRIRQSISDPVQSNHEAKRQHLKELSTQRTGKWPNTLEAMRRKKENWKKDKEEREEAERLKIDEEELRLQKEYRTKQIERANRLLYEQTDRMKTLRSKELLADVLQDREYQIGEKNEFKAMDQKVEDGWTGVLMTQLRDADKKADDERKVRERKHKELVVMQQKQLEEYKNSHIATLREEMRDGERIK--AKAEQDARDEEESELARKRRVKQANEDMRLANERLNLLRKQEAEKEV 245          
BLAST of mRNA_P-littoralis_Contig610.21.4 vs. uniprot
Match: A0A7S1Y0J5_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1Y0J5_9STRA)

HSP 1 Score: 111 bits (278), Expect = 6.520e-23
Identity = 99/290 (34.14%), Postives = 154/290 (53.10%), Query Frame = 1
Query:   22 VVLTQAELARIRAKVTKTPETDADARRRY-LKILSDERVSHWPNTLEAHRQNKENWKKEQEDIIEAKRRDTDKEEAFLQRQLRAETIKRANDKLYEQTGKMKLLRSNLLYAET---RNDQIAENAERHVDEEALAAAYHQEIKRQVADGDAKEKSAVDARAAKAKVTAKKQQEQLQEFQTAYIASLVKEKEDGDETQRTAKAAIEAEEEEKQALKIKNRAEMEKMLAANQDLHERKAQRISEELDYMEKCRQQRNVLDRAARARKSLEAKRFNEKQAVRQQMIDKATREL 879
            VV++++EL R+R  V+  P++  DARRR  L  LS++RV +WPNTL+A R+ KENWK+E+    EA               +RA  I RA   +Y++T +MK LRS  L+ E    RN Q+   A      +     + Q +K+Q+A+ DA+E   ++ R   A+  A+ QQ QL+E +  Y+A L++ +++G+     AK  I  E EE++A   K +  +  M  AN+ L   K      E    EK +Q+R V+++  R               +RQ+MID+AT EL
Sbjct:   11 VVISRSELQRMRDSVSDVPQSTVDARRRERLTKLSEDRVKNWPNTLQAMRRKKENWKREKLAAEEAXXXXXXXXXXXXXATIRANAISRAQKLMYDETDRMKQLRSQKLFTEVVADRNHQVQVRAALRAKSKEEDLVHFQIMKKQLAEADAREAMELERRRENAREVARIQQGQLEECRQRYMAHLIESQKEGEAILAKAKEEIRQELEERRASIAKEKKAIYDMAEANRYLQGMKVGDDVIEAAEEEKRKQERYVIEKRERDXXXXXXXXXXXXXXLRQRMIDRATSEL 300          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig610.21.4 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FIR2_ECTSI1.310e-21574.89TPH domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A6H5KEN4_9PHAE1.230e-18868.85Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A835YVV5_9STRA1.170e-5336.24TPH domain-containing protein n=1 Tax=Tribonema mi... [more]
A0A7S3XWQ0_HETAK3.630e-4732.90Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A7S2FT83_9STRA3.370e-2626.20Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A1V9Z7K3_9STRA1.400e-2527.80TPH domain-containing protein n=1 Tax=Achlya hypog... [more]
A0A067BQ09_SAPPC1.900e-2528.99TPH domain-containing protein n=2 Tax=Saprolegnia ... [more]
A0A5D6Y2N9_9STRA2.230e-2435.42TPH domain-containing protein n=1 Tax=Pythium bras... [more]
W4GU32_9STRA3.430e-2337.86TPH domain-containing protein n=9 Tax=Aphanomyces ... [more]
A0A7S1Y0J5_9STRA6.520e-2334.14Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig610contigP-littoralis_Contig610:56567..66447 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D7FIR2
PFAMsTPH
Model size1424
Max annot lvl2759|Eukaryota
Hectar predicted targeting categoryother localisation
Exons14
Evalue1.21e-216
EggNOG OGs2CIRV@1|root,2QWHX@2759|Eukaryota
Ec32 ortholog descriptionconserved unknown protein
Ec32 orthologEc-20_003260.1
DescriptionTrichohyalin-plectin-homology domain
Cds size1404
COG categoryS
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791273.8987536-UTR-P-littoralis_Contig610:56566..565861680791273.8987536-UTR-P-littoralis_Contig610:56566..56586Pylaiella littoralis U1_48UTRP-littoralis_Contig610 56567..56586 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791273.9130836-CDS-P-littoralis_Contig610:56586..567131680791273.9130836-CDS-P-littoralis_Contig610:56586..56713Pylaiella littoralis U1_48CDSP-littoralis_Contig610 56587..56713 -
1680791273.9277136-CDS-P-littoralis_Contig610:57495..575901680791273.9277136-CDS-P-littoralis_Contig610:57495..57590Pylaiella littoralis U1_48CDSP-littoralis_Contig610 57496..57590 -
1680791273.9395337-CDS-P-littoralis_Contig610:58172..582501680791273.9395337-CDS-P-littoralis_Contig610:58172..58250Pylaiella littoralis U1_48CDSP-littoralis_Contig610 58173..58250 -
1680791273.9534476-CDS-P-littoralis_Contig610:59287..593811680791273.9534476-CDS-P-littoralis_Contig610:59287..59381Pylaiella littoralis U1_48CDSP-littoralis_Contig610 59288..59381 -
1680791273.9681401-CDS-P-littoralis_Contig610:59779..598681680791273.9681401-CDS-P-littoralis_Contig610:59779..59868Pylaiella littoralis U1_48CDSP-littoralis_Contig610 59780..59868 -
1680791273.9793098-CDS-P-littoralis_Contig610:60366..604501680791273.9793098-CDS-P-littoralis_Contig610:60366..60450Pylaiella littoralis U1_48CDSP-littoralis_Contig610 60367..60450 -
1680791273.9942055-CDS-P-littoralis_Contig610:60982..610751680791273.9942055-CDS-P-littoralis_Contig610:60982..61075Pylaiella littoralis U1_48CDSP-littoralis_Contig610 60983..61075 -
1680791274.0069337-CDS-P-littoralis_Contig610:61344..614761680791274.0069337-CDS-P-littoralis_Contig610:61344..61476Pylaiella littoralis U1_48CDSP-littoralis_Contig610 61345..61476 -
1680791274.020998-CDS-P-littoralis_Contig610:62456..625221680791274.020998-CDS-P-littoralis_Contig610:62456..62522Pylaiella littoralis U1_48CDSP-littoralis_Contig610 62457..62522 -
1680791274.031933-CDS-P-littoralis_Contig610:62981..630831680791274.031933-CDS-P-littoralis_Contig610:62981..63083Pylaiella littoralis U1_48CDSP-littoralis_Contig610 62982..63083 -
1680791274.0421999-CDS-P-littoralis_Contig610:64013..641031680791274.0421999-CDS-P-littoralis_Contig610:64013..64103Pylaiella littoralis U1_48CDSP-littoralis_Contig610 64014..64103 -
1680791274.0523908-CDS-P-littoralis_Contig610:64425..646021680791274.0523908-CDS-P-littoralis_Contig610:64425..64602Pylaiella littoralis U1_48CDSP-littoralis_Contig610 64426..64602 -
1680791274.063526-CDS-P-littoralis_Contig610:65193..653341680791274.063526-CDS-P-littoralis_Contig610:65193..65334Pylaiella littoralis U1_48CDSP-littoralis_Contig610 65194..65334 -
1680791274.0743616-CDS-P-littoralis_Contig610:66411..664471680791274.0743616-CDS-P-littoralis_Contig610:66411..66447Pylaiella littoralis U1_48CDSP-littoralis_Contig610 66412..66447 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig610.21.4prot_P-littoralis_Contig610.21.4Pylaiella littoralis U1_48polypeptideP-littoralis_Contig610 56587..66447 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig610.21.4

>prot_P-littoralis_Contig610.21.4 ID=prot_P-littoralis_Contig610.21.4|Name=mRNA_P-littoralis_Contig610.21.4|organism=Pylaiella littoralis U1_48|type=polypeptide|length=468bp
MPVKIERVVLTQAELARIRAKVTKTPETDADARRRYLKILSDERVSHWPN
TLEAHRQNKENWKKEQEDIIEAKRRDTDKEEAFLQRQLRAETIKRANDKL
YEQTGKMKLLRSNLLYAETRNDQIAENAERHVDEEALAAAYHQEIKRQVA
DGDAKEKSAVDARAAKAKVTAKKQQEQLQEFQTAYIASLVKEKEDGDETQ
RTAKAAIEAEEEEKQALKIKNRAEMEKMLAANQDLHERKAQRISEELDYM
EKCRQQRNVLDRAARARKSLEAKRFNEKQAVRQQMIDKATRELEAARRTA
DNKAEKEARQQRQKEDDAAARKIKAREDLRQQIDKSRAIQIRQRAEKGEA
RRAEDKEIKAYFQHRGSEMDRLEKEEEAARLDREKQLRKAQRLQARERNE
KEMALQAFEAVNHARMLSAQGDEDARFKKIVHGYMDEFDARGQSTYLLHR
TLNHKNPEMFPSGNLQL*
back to top

mRNA from alignment at P-littoralis_Contig610:56567..66447-

Legend: polypeptideCDSUTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig610.21.4 ID=mRNA_P-littoralis_Contig610.21.4|Name=mRNA_P-littoralis_Contig610.21.4|organism=Pylaiella littoralis U1_48|type=mRNA|length=9881bp|location=Sequence derived from alignment at P-littoralis_Contig610:56567..66447- (Pylaiella littoralis U1_48)
ATGCCCGTCAAGATCGAGCGCGTTGTATTGACGCAGGTGGGGCAGCGTTT CCACATAAGGGGTCTGCATAGATATGATAGCTCGCGTTGAGATGTTCTTG CCCTCTGTTCGGTGGTGCATCTTCTCCAGTCCATACGATACGCACGCCAA AAAAGCAGAAAAAAGGAGCGTGCGGCGCTATTTTGGGCACGTTCCTTCAT ACATGCCGCGGGCTTGGTCACCCCATCACCCCCCGGGGGCATACTCGTAC AAGCTCAAATGATCTAGATGTACTGTAACTCAGGCCAGCTGGAAAGTTGA CTATTCACAATGGGCCATCTGCGATAAATCCAGCGATAACTAAGGCTTAC CGCTCACCGCCTTGGTCTTGCAGGGTTGTCGCAGTGTCGCAGACGATGGA AAGGAATCATGCGGATATTTACAGCAGTACTCCAACATGCTGAACCTGTG AACTTGTGTTCGTTCATGTTCATGGTCTGTCAGATAAACCAAGATGTTTT TTGTGTATCAAAGCCCACGCAAGACACATACAGCAGTAGACAGCTGCTGT ATCGGTGAAGCTGTTGTTCAGACTAAACGTTGTTATCGTGAATCCCATTT CGACCAATACTGCTGTGTAGAAGAATTAGTTGGTTCCAGTGAGTGGCCGC CCGCTGTTGTTACGTCTTTTGTGTCTCACGAACAGACTATTTCGAACAGC TTGGCATGTCTACTTATAATAAAATAAAGATCGCAACACATCAGATGGCT CGGCCGAAAGCCCGACACCAGCATACAGAGTATTCGTGGAGCTGTAAGAT TCACATTCTGCACGTAGGATGTGGAGTACGGCCCAAAAACACATGAAACA TAAAAAACAACAGCCGTAGTGAACAATTCCCTAATTCTTAGAGCCTGCGT GTTTACATCCCATTTATTCTATAGGCACCAGTCTACATCTTTCGATATAA CTATAAAGTGGGTGCACCAGTCGGGGTCACACAAAAGGAAGGTCACACAT AACTTTTTTTTTTCTCCACCCACCTTCTGCGGCGTGCTTGTCTTTTTTGC TTCTCTTATAATGTACTTGTATTCAAATGAGAAACATTACCTGATACGGT ACATTTTGTCCAGGCGGAGCTTGCTCGGATTCGAGCCAAGGTTACCAAGA CGCCGGAGACCGATGCAGACGCCCGTCGCCGATACCTCAAGATACTTTCC GACGAGCGTGTGAGCCACTGGCCCAACACTCTCGAGGCACACCGCCAGAA CAAGGTAAACACACGGCTGATGCTGTGCGAGTGGAGTCGTAGATCAAGGG CGATTTGTGTGTGTGTCTATCTTCGTATGTTTGACATTTTTTTGGGGCGG GCGATTGTCGTTTGGAGGAATCGCCTTCGACAATGACCTTAACCACGGGT GGGTGTGCATAGATACGAAGATATCACAACATATGGGCAGTATGTGCAGT AGTACGACGAGCATGGAGGGTAAAAATGATGTCAAAATGAGGGGGGGGAA AGCTGCATAACAATAATGGCAGCGGACGAGATTCAGGTTTTTGGGAATGG AGAAGGGGCCTTCATCTGTTGTGCATGCCACACGTATATCAGGTCATTTT AAGACAAGGATTCAAGATATCAACGAGCTCCCCCGTAGTATTACACCACC GGAGGAGCACTTACTGTGGGGCCCGAGGTCAAAGTCCTCGGTGAGGTAAA AGTCCTCGGTACAAGACACACCACCAGAGTCAACATTTTCCCCACCCTCC TCGTAGTACTTATTTCGACATTTTTCTGCGCTCAAATGTCTAATTCACGC AACACCCCCGGATTGGGCGTGGCATCGATCGACCACACGCAACAGGAGAA CTGGAAGAAGGAGCAGGAGGACATCATCGAGGCCAAGAGGAGAGATACCG ATAAGGAAGAAGCATTTCTGCAACGCCAGCTGAGAGCGGAGACCATCAAG AGGGCCAATGATAAGCTGTACGAACAGACGGGGAAGATGAAGCTGCTACG AAGTAACCTGCTCTACGCCGAGGTCATCGAGGCAAGTTGTTGCTGTTGTT ATTGTTTTTGGTGTTGCTGTTGTTGTTGCTTTTCTTGGTGTTGGTGTTGG TGGTGATGGCGTCAGGCCTAACAAATATGGCACGGAAAAAACAGGGAAGC CGATATTATTTTGTGTGCGAACAGGACTGCTGAGAAAGCCTCTCTCTACT GACACCGAGATCTTTGCCGTACGTCGAAAACCAAGAATCAATCACCGATG ATAAAACACACATTGCAGGATAGCCAGTTTCGTCTTGAGATTCACGACGA CGACGGTTTTCACGGCGGCTGGTTGCGCCCTTTCGACTTTTCAGACGCGG AATGACCAGATCGCGGAGAACGCAGAACGCCACGTAGACGAGGAAGCCCT GGCCGCGGCGTATCACCAGGAGATCAAGCGACAAGTGGGTGTGTTGGCAG CGACACAGCACACAGTATGTGCCATACAGCAAGCATGCAAAAAAAACGAT GTGTGCACATCAGTCTGCTGTTGTTGTGCACCTGCCGCGTCGCCTGTGTG TAGTGGGCATTTAATGGCGCAGGGTTTTAAACATTCAAGCATGTAATTCG GTAGTAAGATTGCGTGCATGCCAAGGATGTGTTTCTGGCTTCCCATGGCG GCATCGATGACATGACACGAGAGCTCTTATTTCGCACTGATAGTGATGAA GTCGTTTCCGTTAAAACAGGAAAAAAAAATAGACCACTCACCTAAGAAAG CCGAAAACCAACACCCCCCCCCCTGCTCAAATGGGGCGAACGAAAAAAGA AAAGCAAACACAAACGCACACGCACGTCCAAACTACTATAAAAAAAGACC AAAATAGACAACATAATTGAGTAAACGGCTTGTTGCTTCAATGCAGGTAC AAGTAGTTGCAGTCGGAGCCCAGACAAAAATTCCGCAACAATAAATGGAC GGCACATTCAAGGTTGATATCGCGCGAGGGTCGTCTGCCTACCATAACGG TAGTTTGGTAACGGCGTTGAAACAAAGGGTGCATTTTTTTCGTGTGGGGG GGGGGAGGGGGGGGGGGGTTCTTCTTGCAGCTTGCCATTCGTCAAAAAGC GAGGAATCCAAACGAAACCTAACAGATATCCGAAGCGAGACCTTGTGCTA TAAAATACTCCGTGTATGTAAAAACACGCACCATTGCGTATGCTTGACCT GACCGTGCCGTCTCTATCATTGATGTTTCACCTGCGCCTAGCATGTACAT TTTGGGGCGTATCTTGGGGGAGGTAGAAACCACACAGCAGACAATTTGAT GCTTTTGCGTGGTGGTGGCGGGTTTTTTTCCCTTTTGATGATGCGTTTTC TTCTTTCATAAAAGGTCGCTGACGGGGATGCGAAGGAAAAGTCAGCAGTC GACGCCCGTGCGGCGAAAGCGAAGGTCACCGCTAAGAAACAGCAGGAGCA GCTGCAAGAGTTCCAGGTAATAAGCATTCAAATTATTTTTCGGTTCACGC CAACGTGTAGCAGCTTTTTCAAAAGCACTTGTTGTATTATACACAGAAAA AGCAGCACCGGCATCCTATTGTTGCTGCTCTTGATAGAGACATTAGGCCG TCGGTTCACGGTGCCGCTTGACCGGGGAACCGGGAACAACCGTGTTTTTG TTTCCCTTCGAGAAACCACAACGAAAGTTCCTCTCGTGAAGAATCCGTCC TTTCTCTCCTCTATCGTTCGTGTTGCTTCGAACTCACTCCCGCCTCCTAC CGTAAAGTGGTCAGCAGTAGTAGTAGTATAAAACGTTTGACACTACCAAA CCCCGTTTAGTGCGATGAAATTTTTGTCTTTGGTCTCTTCATAACTAGCA GCTGGGGAACGCTTCAACTTTGAGTGTTCGTGCTTCGCTCGTTGTCGTTT TTTTTGTTAAATACATTGACGACAGACTGCGTACATCGCGAGCTTGGTGA AGGAAAAGGAGGACGGGGACGAGACGCAAAGGACCGCGAAGGTGATGCGC TCATCTTCCCACCAACATTGTGTGTATGTGTGTGCATTCGTGTGTGTGTC TCCCTTAATATGTGATGTAGTAATCACTGCTATACGCTGCTGCTGCTGCT GCCGCTGCTGCTGCTGTAGTAGTAGTAGTAACAAGCAGTTGTTGGGGATG ATGATGGTCTTGGTGCTGCGGCCCACTACATACAGTGGTGTGATCGATGC CTGCTTGTGTGCGCACACCGCCGAATCTTCGAGCCGTCCCATCACGTTCA GCGGCCACAAAGTTCAACGTGCTTCATATGATGTCAAGACGCGGAGTAGA CACTGAGTTCAGGCCGAGTACTGAAGGAAGATTCAAGATTCAATTCAACC TACAGCAGTACGACGTTCAGTCGCGGAAATAAACGACTCGTTCTAGCTGA CGCCTGAATTCTACCACATTCAGCAATGGCCTCGACTGAAAACAACAGCG CCATTCACTCCATAAGACCATGCGTACATGCTGCATAGTCTGCTGGCCAG CAGCGGAGCCTGCCTCTGAGAGGACCCCTCATGCATAAAAATAGCACCGT CTAATAAATGACATGAGATACCCACACCGCCTGGGCTAGTTTTGAAAGTC TGAATACTCTAAAGCAATAATACAAGTGTTAGTGATGATGACAATGTCGC TACTGTAAAAAGATCTCGACAGGTTTTTGAAAACACTTCGTTTGGAAGTG TGAATTCTGTTCGTTGTGGAGTGATCGACCCGTGAGAATCGGTACAGGGG ATGCGGTATCTTACGTCATCTATGGAAAGCCCGTCATGTTTTCCGACGAA AGCCGAACGTGCACAAACAAGTTCTACGAAAGTAAACCCTGTCATATGTA ACCGCAACACAAAGCATAAGTCAGTACTATACCACTGAGAGTCGCCTGTT ATCTGTAAAAAAAGTAAGTTATGACGGTTGTTATACACAACGGTAACCGT GTACTTGTACCAAATGTTCAGGCTGCCATCGAGGCCGAAGAGGAGGAGAA ACAGGCCCTCAAGATCAAGAACCGCGCGGAGATGGAGAAGATGCTTGCGG CGAACCAGGACCTGCACGAGAGGAAAGCCCAGCGTATTTCCGAGGAGCTC GATGTAAGTGACAGGCGAGAGATATTTCGCGACTTCAAAAACTGACTGGT ATAGAGGTTATCTCCATCGCAACAATATTACGTAGTAGGTCAACTTGCCG AAGTTCGTCTGCCTCGCAGACTCTGCTGTGTACTACATACAGCATGAGAG GAAGAACAACACCTCGAAATAAGTCGTACCCTCACTACTTGACACTGCCA TGCTGTGTAGTACGTCGTTCGGGTATGTGTGTACAAAGTACTTCCTTTAA GTTTACATGTTTCAAATTACAGTACATGGAGAAGTGCCGGCAGCAGCGAA ACGTTTTGGACCGGGCCGCTAGAGCGAGAAAGAGCCTGGAGGCCAAGAGA TTCAACGAGAAACAGGTGCGAGGAATAGGCGCACCCACCCGCCGCCCGTT TTTCCGACGTCTTCTCTCTGTCTCTGTCTCTGTCTCTGTCTCTACCTTTG TCTCTCACGATCAATCCCGACTAACCCAACCCAGCAACCCATCACTTTAC TTTTTCCCGGAGATCTCATTTTTGAATCAAAGACTGGAGAGTTCGATCAC ATGATGCTCGATTTGAACGAACCTTCACTGTAGCTGCTGCAGGTTTTGAA ATAAGAGTGCAGCGAACACCTGGTACATGAACAGATGCTGGCGTTTGTGC GTTGTGTAAATGTAGCGGGGGCAGAGGGGGAGGGGAGGGGGATTCTCCGA GTCAGAGTGTCCCTCTACGGCAACGAAATAAACACTCTTGTTGTGTGGGG CCGGTGCTCTCCTGATGCATCCATCCGTCATGTGGTCCCGGTGCTCTCTG CTGATGTGTCCATCCTGCGTACCCCCCCCCCTCCCCCGCCCCCCCGCCTC TTCTTCTTGACGCTCGCGTTGGGTCTACTACCGGCGCCATCAACCAGGCC GTCCGGCAGCAGATGATCGATAAGGCCACGAGGGAGCTCGAAGCCGCCAG AAGGACCGCAGACAACAAGGCGGAGAAAGAGGTGCGACTATCTGTTGATT GGTACGATCGACACGATGAAATAACTGAACTCGTGAACTCGTAAAATTCT TCATTTTTTTACGCCCTTCAGCTCTCTGGATTGGTTGGTTCTCTTGACAC ACACGCGTACGCACGTTACCTCCATGATCGATTGACTCCCAGAGAGCTAT GGTAGGTTTTTGGGTTTTACATTTGATCGATCAAAGATCTCTCTCTCTCT CTCTATCTCTCTCTCTATCTCTCTCTCTCCAAGAAGAAAGAGGCTGACAA CGCGTTTGTTCATGACTCTATAACAGCTTGCAAATCGCAGATCACTGCGA GATAGAGGTCAGATACGTACTTTGTTACGAACTTTTTCTTACAAGGACCC AAAGCAGTAGTAGTAGTCGCGCATGAGTTTCAGGTTTTAGCTCTTGGGGT GGTTGATCAATCAATCAACCAATCAACCAACTAATGAATCAATAAATCAA CCAATCAATCGACCATTTGATGTTCGCAGGCGCGCCAGCAGAGACAGAAA GAAGATGACGCCGCCGCCCGAAAGATCAAGGCCAGAGAGGACCTACGCCA GCAGATCGACAAGAGCAGGTAATCTGCCCTCCGCTGCTTTTTTGTGCGCG AGCCAGTCTCTGCTACGACTACGAGCGAGCGAACACGATTGATTGATTCC AACCAAAACAAATTGAAGAACTAACTAATGTTTAATGCTGTCAGGAGGAC ATTATTGAGAAGGGGCTGGCGAGGGGGCCCAGTCAAGGGAAAACGAGCGG TGCTAAACCCAGCCCCCTCTGGGCGAATAAAACGGGGGATGGTTCACTAT GGCAGGGAATGAAGCTCACGATACCACACAATAATAAAAGTGGTGACAAG GAACGGCGGTTCAATTAAACAATATGGCGCGCGCACAGATAATACCTGGT ACTATACTGTAGCGCAACTATGTACTCCGAACACGCAAGTTTTTTTTTGG CGTCTGTTGTTGTCAGAGCCATCCAGATCAGGCAGCGCGCGGAGAAGGGA GAGGCCAGAAGAGCCGAGGACAAGGAGATCAAGGCTTACTTTCAACACAG AGGCAGCGAGGTCAGTCAGCCAGTCAGTCAGTCAGAGCGTGCTGCGTACA TCCGAAGGGGAATTAAGAGCGCCCGTGCATCGCCTCCAAAAACCCGTTAT GCCCTCTGCAAGGGCGGGGGGGAGTTGTACCAAGGGCGGCACTCCGGTCT CCAACATGTTTCCTGGTGCACAATATGCGTGCGTACGTACATGCCATGCA CCGAGGTGCCGTGTATCCATACACACGGGTCATCACACGTCCACCCTCCT CGACTTCACCTTTACACCCCCTGACATCAACTTCAAAGTAATTATTTTGT TCTTTGAGAGGACAAATTTATACTTCGAAGTACAAGTAATTTAATTTGTA TATAGGTCAGAAAAGAAATACGGTCCTCAGAAAGTAAGCAAATGACCAAT CGATCCCCTCTCACTTTGTACGTTGTTCGAGGATCGAGCCGTCATATCAC CCACCATTCGGTCCAAGTACTACATGGTGCATGTTTGCTTGCACGCAATG GTACAGTTTGACCCCCCCGTCAACCGCATCCCCGTGATTTCGGCGATTTC ATCAAAATATCTCGTCATCTTGGCTGCAACCTCTGCACCATGTGTAGAAA GGTAGGTGTACACGTACAAGAGAGAAAGAAAGAGAGAGGAGGGGGGAGAG GGATATATGGTTTATTACTTAACCGACTAGTGACGAACGGCTCTGGGAGA GCCGCTGCAACCAATACCCGATTTTTTCAAAGAAAACGGCTGCATTCCTC AACTTTTAGAGTTCAAATGTGCTCCTCTGCCTCACGGGGAGGGGAATGTT TTTGTTACATGTGTTTTATTCAACCCGTTGGGGGGTCGGCAGAGGGGCAG AAGTGTGCTCCCCCGCGCCCCCTTTTTCTTCTCCCCTCCCCAACAACGAT GAACGACCAACAACCACAATAACAGTGCAACACTCATTGTCCGTCGATCG AAACTTGTTGGTGATTGTGCGGCTTTTATCACAGATGTATCATATGTATG TCCAAAGTTTGACCCCACCCCTGTGTTTCAAAAACCTCGTGATCTAGATG GATCGGCTGGAGAAGGAAGAGGAGGCGGCTAGACTGGATCGCGAGAAGCA GCTCAGAAAAGCCCAGAGGCTACAGGTGACAGGCGTGACAAATATACCCT TCTTTGTGTATCGCTGATGTTTCTGGGAATGTTGCCGCCGCTGTCTCTAG TGCGGTTCTAGTGCGGTTGTTCTTGTCGTCGTCGTCGTCGTTGTTGTTGT TGTTGTTCTGATTCTACTGCCGACTCCTGCAATCGTTGGTCAGTCTGCAG ACACGACTTACTTCCGCCGTTCCACGGCAGCGCAATAACATGTGTACGAG CACTCGAAATATTTCTAAATATGGAGGCTGCTTTACCTTTTAAGTGCAGG CCCACCCATCGTATATCCATGCTTCAGCCGTGTCTGACTAGAGTGCACTC TTTGTCAGAGCTTTTCTCCCCCCCCTACAGTAGTGGCGAGCGCAGGATAT GCAGTCTTCAGAATTGGAAACAAAATCTATTTGCGGTCTATAGATGAACA CTGTAATAAGTCAGCATGCCTGTTGACAGATGCGTGTTGCGGCACCGACA ACAACAAATGGCGGGGAGATCGGTGATGAGTTATTTGGGCTGTTAAGTCA TGTGGGCCTAAATTTCTCCATGTATGCGGCGTATTGTTACCAAATATGTA CGCGCAGGCGAGAGAGCGAAATGAGAAGGAAATGGCGCTGCAGGCATTCG AGGCCGTAAATCACGCCCGGATGCTGTCCGCCCAGGGAGACGAGGATGCC AGGTATCAAACCCGTCGCTTTTTCACATGATAGGGCGCTCTGCAACTTGT CCACCCTCGACAAACGCCTCCTTGTATACTTGTACCCCGGGTGATCAACA CTCCACCAGAGGTTGTTCGGGCACGCACCATATGCAAGTATGTTTGCTGC TCGCAAGGAGGAGGAGGCCAAAAAGAAAGGCATATTTGCCCCGCGTGTGA GAAATCAGAGGAAAACTTGTAACACACGTACCGATAATTATGTGGGTTTC ACAGGAACGTAAGAGATTGCCTGGTGATGGGGGACAGATATGATGATGTG ACACGGCAAAAAAAGGTAGAAAACCTGACACAACAGCGCCAAAATGAGTG ATGTTACGTGCCGGAACGATGAAGAAACGCTGGCCGCTGGAGCACAAATA AGCAAGAGGATCCACAAGCAAATGGTTCTTTCGCAAGATACGGGAACCAT GAAATAGCACCCAAGTGGACGACCACCCAAATATCTCGGCAGTTCTATCC AACAAATAAAGTAGGAGAGGTGATGAAGTGTTCCGTCTCGAAACCTGTGC GTGTTTGACGGTCAAATGACTCATGGCAAGCCAAAAACAATGAAGAATCT CCCCCCCCCGCTTCTCTGCATCGAACTACGACACATTAAAGTCTACCGTT GCATCCCACATGAACACATATTGGATGGTAGGGGAGCACTTCGTTTACTC CGCACTATACAAATGTTTCTGGCTGTACCGAGGCCCCCATCCCCTTTATC CGTTCCCTCACCTCGACACTTTTTGTTCTGACAGGTTCAAGAAGATCGTC CACGGCTACATGGACGAGTTCGACGCTCGGGGGCAGTCCACCTACCTCCT TCACAGGACCCTCAACCACAAGAACCCGGAGATGTTCCCCTCCGGAAACC TTCAGCTCTGATGTGATACTCTTCGAAGTGG
back to top

Coding sequence (CDS) from alignment at P-littoralis_Contig610:56567..66447-

>mRNA_P-littoralis_Contig610.21.4 ID=mRNA_P-littoralis_Contig610.21.4|Name=mRNA_P-littoralis_Contig610.21.4|organism=Pylaiella littoralis U1_48|type=CDS|length=1404bp|location=Sequence derived from alignment at P-littoralis_Contig610:56567..66447- (Pylaiella littoralis U1_48)
ATGCCCGTCAAGATCGAGCGCGTTGTATTGACGCAGGCGGAGCTTGCTCG
GATTCGAGCCAAGGTTACCAAGACGCCGGAGACCGATGCAGACGCCCGTC
GCCGATACCTCAAGATACTTTCCGACGAGCGTGTGAGCCACTGGCCCAAC
ACTCTCGAGGCACACCGCCAGAACAAGGAGAACTGGAAGAAGGAGCAGGA
GGACATCATCGAGGCCAAGAGGAGAGATACCGATAAGGAAGAAGCATTTC
TGCAACGCCAGCTGAGAGCGGAGACCATCAAGAGGGCCAATGATAAGCTG
TACGAACAGACGGGGAAGATGAAGCTGCTACGAAGTAACCTGCTCTACGC
CGAGACGCGGAATGACCAGATCGCGGAGAACGCAGAACGCCACGTAGACG
AGGAAGCCCTGGCCGCGGCGTATCACCAGGAGATCAAGCGACAAGTCGCT
GACGGGGATGCGAAGGAAAAGTCAGCAGTCGACGCCCGTGCGGCGAAAGC
GAAGGTCACCGCTAAGAAACAGCAGGAGCAGCTGCAAGAGTTCCAGACTG
CGTACATCGCGAGCTTGGTGAAGGAAAAGGAGGACGGGGACGAGACGCAA
AGGACCGCGAAGGCTGCCATCGAGGCCGAAGAGGAGGAGAAACAGGCCCT
CAAGATCAAGAACCGCGCGGAGATGGAGAAGATGCTTGCGGCGAACCAGG
ACCTGCACGAGAGGAAAGCCCAGCGTATTTCCGAGGAGCTCGATTACATG
GAGAAGTGCCGGCAGCAGCGAAACGTTTTGGACCGGGCCGCTAGAGCGAG
AAAGAGCCTGGAGGCCAAGAGATTCAACGAGAAACAGGCCGTCCGGCAGC
AGATGATCGATAAGGCCACGAGGGAGCTCGAAGCCGCCAGAAGGACCGCA
GACAACAAGGCGGAGAAAGAGGCGCGCCAGCAGAGACAGAAAGAAGATGA
CGCCGCCGCCCGAAAGATCAAGGCCAGAGAGGACCTACGCCAGCAGATCG
ACAAGAGCAGAGCCATCCAGATCAGGCAGCGCGCGGAGAAGGGAGAGGCC
AGAAGAGCCGAGGACAAGGAGATCAAGGCTTACTTTCAACACAGAGGCAG
CGAGATGGATCGGCTGGAGAAGGAAGAGGAGGCGGCTAGACTGGATCGCG
AGAAGCAGCTCAGAAAAGCCCAGAGGCTACAGGCGAGAGAGCGAAATGAG
AAGGAAATGGCGCTGCAGGCATTCGAGGCCGTAAATCACGCCCGGATGCT
GTCCGCCCAGGGAGACGAGGATGCCAGGTTCAAGAAGATCGTCCACGGCT
ACATGGACGAGTTCGACGCTCGGGGGCAGTCCACCTACCTCCTTCACAGG
ACCCTCAACCACAAGAACCCGGAGATGTTCCCCTCCGGAAACCTTCAGCT
CTGA
back to top