mRNA_P-littoralis_Contig61.111.2 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig61.111.2
Unique NamemRNA_P-littoralis_Contig61.111.2
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
BLAST of mRNA_P-littoralis_Contig61.111.2 vs. uniprot
Match: D8LMS0_ECTSI (SNF2-related domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LMS0_ECTSI)

HSP 1 Score: 1014 bits (2623), Expect = 0.000e+0
Identity = 733/1165 (62.92%), Postives = 786/1165 (67.47%), Query Frame = 1
Query:  307 MEFTCMWSKDAQQKKRKRWTDGVARFFPSTGVLSIWDQDASAKVSSTRLKPEEAAAVLQEDGDEARVG-GISLQIMAAIQQQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSGKEGIASRLGGLAAG---GSGFRRGKLGAARRSLQHATGPLASGSSSSVSAGAVARTADXXXXXXXXXXXXXXXXXGAGRGIGGARRFHAPRSFSSGTAAQATSNANPPASSSARRETGSCGSAGPAEAGEGPSDFSGASHGXXXXXXXXXXXXXXXXXXVAKTAPGGFSGNHKRGDTHAAGAAASPEGLVLEWTAGDPPRPLLAGASLARRLHPHQREGLKVLWECLAGRGGYEGRGAILADEMGLGKTATAIALCTCVLRHRRAECLKAVVVCPSSLVRNWANEFKKWCPLGANAVPVDQAGAAAAQLVADFKIGAPSAYPILVISYELYRNHGKVINATSGLGLLIADEGHRLKNSSETKTTRALKACPAVMRLVLTGTPMQNDLDEFFAVADFVNPGLLGSLKSFRSRYTRPIKAAWDRDADEDVADFSTERTRELAQITGKFVLRRTKDVIRGSLPPASEVVIFCRPSARQLSLYESCIASSADARSLLYGDAERGGGXXXXXXXXXXXXQLDGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRPVSLQGVLPLISTLRRLCNHPDLVAGTDGVVASGGGGLGGESNVEDARDDTLGELR---GNGGGKENSRSTV---TASRAAFKRPWKVPRSSGGVVAAA--------------------------------------------AAMVEPRYETEASGKLLVLEALLKAVRREFPCDKVVVTSNFTSALDVLEKLAERNAWGFLRLDGGTPTNSRQNLVDRFNKAPPENAFLFFLSAKAGGVGLNLVGANRIVLFDSDWNPATDDQAMARVWRLGQTKKVWMYRLLSTGTLEESIFQRQIFKGALYDLIQDSNEASGAHSSSSTGAVDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNRGFSQEELKELFVLKTETTSDTYDKLRXXXXXXXXXXXXXXXXXXAPEGNSRYEQTTAKEPGEERGEGTGQEGDGVIGAALTPVGGE---WKDYLGPSEVLDKALRLALLEETTGT 3630
            MEFTC+WSKDAQQKKRKRWTDG+ARF P+TGVLSIWDQDASAKVSSTRLKP+EA+AVLQEDGDE+R     + +  +                                        GK G  S L   AA    G+G R G +G    ++   T  L  G       G + RT                   GAGRG+GGARRFHAPRS  SG AA A   AN     S   E G    +       G       S GXXXXXXXXXXXXXXXXXX       G S                P+GLVLEWTAGDPP+P++AGASLARRLHPHQREGLK+LWECLAGRGGYEGRGAILADEMGLGKTATAIALCTCVLRHRRAEC KAVV+CPSSLV NWANEF+KWCPLG  AV VDQAGAAAAQLV+DFKIGA + YPILVISYELYRNHGKVINAT GLGLLIADEGHRLKNS+ETKTTRALKACPAVMRLVLTGTPMQNDLDEFFAVADFVNPGLLGSLKSFRSRYTRPIKAAWDRDA+ED A+ S ERTREL ++T KFVLR+TKDVIRGSLP A EVV+FCRPSARQLSLYESCIA SA ARSLLYGD    GG  XXXXXXXXXX        XXXXXXXXXXXXXXXXXXXXXXXX        R + LQGVLPLIS LRRLCNHPDLV   D   A       GE + E       GE R   G+G GKEN  +     TA RA  K  WKVPR+SG   A                                              AA+  P YET ASGK+ VLEALLKAVRRE+P DKVVV SNFTSALDVLE LAERNAWGFLRLDGGT TN+RQNLVDRFN+A PE+ FLF+LS KAGGVGLNLVGANRIVLFDSDWNPATDDQAMARVWRLGQTK+V MYRLLSTGTLEESIFQRQIFKGALYDLI DSN+                      XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX    RGFSQEELKELFVL+TET SDTYDKLR                  A EG  RY++ T +     RG+G    G G   AA   V  E   W+DY GPS V+DKALRLALLEE TGT
Sbjct:    1 MEFTCLWSKDAQQKKRKRWTDGIARFSPATGVLSIWDQDASAKVSSTRLKPDEASAVLQEDGDESRSTLDAASETASTTGGGSAAASGKVTGTPVRLATASGVKLGPSKKLGATSMLGKAGPRSLLSAPAAAAPLGNGIRSGVVGPVAGTM---TSVLGGG-------GGIKRTG----------------LGGAGRGVGGARRFHAPRS--SGAAAVAA-GANE--RESKNHELGGSEKSLARRVSPGTGGSFSRSAGXXXXXXXXXXXXXXXXXXXXXXXASGLS----------------PDGLVLEWTAGDPPQPVMAGASLARRLHPHQREGLKMLWECLAGRGGYEGRGAILADEMGLGKTATAIALCTCVLRHRRAECRKAVVICPSSLVGNWANEFRKWCPLGGGAVAVDQAGAAAAQLVSDFKIGAAARYPILVISYELYRNHGKVINATEGLGLLIADEGHRLKNSAETKTTRALKACPAVMRLVLTGTPMQNDLDEFFAVADFVNPGLLGSLKSFRSRYTRPIKAAWDRDANEDAAELSAERTRELGEMTEKFVLRKTKDVIRGSLPAALEVVVFCRPSARQLSLYESCIAGSAGARSLLYGD----GGDAXXXXXXXXXXXXX-----XXXXXXXXXXXXXXXXXXXXXXXXRTQQGQRRRRIGLQGVLPLISKLRRLCNHPDLVE-EDSSAA-------GELSAE-------GEERQGGGSGSGKENRNTREEHSTAGRAGAKGAWKVPRASGAAAAVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAL--PLYETGASGKMTVLEALLKAVRREYPGDKVVVASNFTSALDVLETLAERNAWGFLRLDGGTTTNARQNLVDRFNRASPEDLFLFYLSTKAGGVGLNLVGANRIVLFDSDWNPATDDQAMARVWRLGQTKEVSMYRLLSTGTLEESIFQRQIFKGALYDLIHDSND------------------DPSKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGKSGRGFSQEELKELFVLRTETRSDTYDKLRRGRAAATPTAAGAAS---AHEGG-RYQEVTPEREAGARGDGEEDGGRGATAAAAPVVAVEEEAWEDYGGPSAVVDKALRLALLEEPTGT 1070          
BLAST of mRNA_P-littoralis_Contig61.111.2 vs. uniprot
Match: A0A6H5JTI7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTI7_9PHAE)

HSP 1 Score: 969 bits (2505), Expect = 0.000e+0
Identity = 728/1178 (61.80%), Postives = 787/1178 (66.81%), Query Frame = 1
Query:  403 LSIWDQDASAKVSSTRLKPEEAAAVLQEDGDEARVGGISLQIMAAIQQQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSGK---------EGIASRLGGLAAGGSGFRRGKLGA-ARRSLQHATGPLASGSSSSVSAGAVARTADXXXXXXXXXXXXXXXXXGAGRGIGGARRFHAPRSFSSGTAAQATSNANPPASSSARRETGSCGSAGPAEAGEGPSDFS---GASHGXXXXXXXXXXXXXXXXXXVAKTAPGGFSGNHKRGDTHAAGAAASPEGLVLEWTAGDPPRPLLAGASLARRLHPHQREGLKVLWECLAGRGGYEGRGAILADEMGLGKTATAIALCTCVLRHRRAECLKAVVVCPSSLVRNWANEFKKWCPLGANAVPVDQAGAAAAQLVADFKIGAPSAYPILVISYELYRNHGKVINATSGLGLLIADEGHRLKNSSETKTTRALKACPAVMRLVLTGTPMQNDLDEFFAVADFVNPGLLGSLKSFRSRYTRPIKAAWDRDADEDVADFSTERTRELAQITGKFVLRRTKDVIRGSLPPASEVVIFCRPSARQLSLYESCIASSADARSLLYGDAERGGGXXXXXXXXXXXXQLDGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRPVSLQGVLPLISTLRRLCNHPDLVAGTDGVVASGGGGLGGESNVEDARDDTLGELRGNGGGKENSRSTV---TASRAAFKRPWKVPRSSGGVVA---------------------AAAAMVEPRYETEASGKLLVLEALLKAVRREFPCDKVVVTSNFTSALDVLEKLAERNAWGFLRLDGGTPTNSRQNLVDRFNKAPPENAFLFFLSAKAGGVGLNLVGANRIVLFDSDWNPATDDQAMARVWRLGQTKKVWMYRLLSTGTLEESIFQRQIFKGALYDLIQDSNEASGAHSSSSTGAVDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNRGFSQEELKELFVLKTETTSDTYDKLRXXXXXXXXXXXXXXXXXXAPEGNSRYEQTTAKEPGEERGEGTGQEGDGVIGAALTPVGGE---WKDYLGPSEVLDKALRLALLEETTGTDAAAFVGDRGGSANNKVATAASSAVTFVREVPRGGEPKXXXXXXXSGAEAASRSPFAPRENA 3816
            L++   DAS KVSSTRLKP+EA+ VLQEDG+E RVGGIS+QIMA +  QXXXXXXXXXXXXXXXXXXXXXXXXXXX       SGK         E    +LG     G+    GK+G  +  S+  A  PL +G  S     A   T     XXXXXX        GAGRG+GGARRFHAPRS  SG AA   + AN   S + +        A     G G S FS   GA HG      XXXXXXXXXXXX                         SPEGLVLEWTAGDPP+P++AGASLARRL+PHQREGLK+LWECLAGRGGYEGRGAILADEMGLGKTATAIALC CVLRHRRAEC KAVVVCPSSLVRNWANE +   P G  AV VDQAGAAAAQLV+DFKIGA + YPILVISYELYRNHGKVINAT GLGLLIADEGHRLKN++ETKTTRALKACPAVMRLVLTGTPMQNDLDEFFAVADFVNPGLLGSLKSFRSRYTRPIKAAWDRDA+ED A+ STERTREL ++T KFVLRRTKDVIRGSLP A EVV+FCRPS RQLSLY+SCIA SA ARSLLYGD                     G          XXXXXXXXXXXXXXXXXXXXXXXXXXRP+ LQGVLPLIS LRRLCNHPDLV   +   A+G         + D  ++  G   G+G GKENS +     TA RA  K  WKVPR+S                          AA A   P YETEASGK+ VLEALLKAVRRE+P DKVVV SNFTSALDVLE LAERN+WGFLRLDGGT TN RQNLVDRFN+A PE+ FLFFLSAKAGGVGLNLVGANRIVLFDSDWNPATDDQAMARVWRLGQTK+V MYRLLSTGTLEESIFQRQIFKGALYDLI DSN+                                    XXXXXXXXXXXXXXXXXXXXXXX    RGFSQEELKELFVLK ET SDTYDKLR                        RY++ T +     RG+G      G   AA   V  E   W+DY+GPS V+DKALRLALLEE TGT +        G +           VTFVREV RGG P+   XXXX G   AS S FA  E A
Sbjct:    3 LTLPAADASVKVSSTRLKPDEASVVLQEDGNETRVGGISIQIMADVGGQXXXXXXXXXXXXXXXXXXXXXXXXXXXS------SGKVTRTPVRPAEASGVKLGPRKRLGATSMLGKVGPRSLLSVPAAAVPLGNGIRSGAVGPAAGTTTSVLGXXXXXXGIKRTGLGGAGRGVGGARRFHAPRS--SGAAAVVAAGANERESKNHKLGGSEKSLARRVSPGRGGS-FSRSAGAGHGRDSGGGXXXXXXXXXXXXXXXXXXXXXG--------------LSPEGLVLEWTAGDPPQPVIAGASLARRLYPHQREGLKMLWECLAGRGGYEGRGAILADEMGLGKTATAIALCMCVLRHRRAECPKAVVVCPSSLVRNWANEVQSRGP-GGGAVAVDQAGAAAAQLVSDFKIGAAARYPILVISYELYRNHGKVINATEGLGLLIADEGHRLKNAAETKTTRALKACPAVMRLVLTGTPMQNDLDEFFAVADFVNPGLLGSLKSFRSRYTRPIKAAWDRDANEDAAELSTERTRELGEMTEKFVLRRTKDVIRGSLPAALEVVVFCRPSTRQLSLYQSCIAGSAGARSLLYGDG--------------------GDADSDDAERGXXXXXXXXXXXXXXXXXXXXXXXXXXRPIGLQGVLPLISKLRRLCNHPDLVE--EDTSAAG--------ELSDEGEERQGG--GSGSGKENSNTPEEHSTAGRAGAKGAWKVPRASEAAAXXXXXXXXXXXXXXXXXXXXXXAAEAAALPLYETEASGKVTVLEALLKAVRREYPGDKVVVASNFTSALDVLETLAERNSWGFLRLDGGTTTNERQNLVDRFNRASPEDLFLFFLSAKAGGVGLNLVGANRIVLFDSDWNPATDDQAMARVWRLGQTKEVCMYRLLSTGTLEESIFQRQIFKGALYDLIHDSNDDPSKEXXXXXXXX-----------------------XXXXXXXXXXXXXXXXXXXXXXXGKSGRGFSQEELKELFVLKAETRSDTYDKLRRGRAAATPRAAGAAGVREG----GRYQEVTLEREVGARGDGEEDGWQGPTAAAAPVVDVEEQAWEDYVGPSAVVDKALRLALLEEATGTPSQV------GGSXXXXXXXXXXVVTFVREVKRGGRPEQQRXXXXVGTGGASHSQFAAFEGA 1091          
BLAST of mRNA_P-littoralis_Contig61.111.2 vs. uniprot
Match: UPI001889348C (DNA repair and recombination protein RAD54B-like n=2 Tax=Rhipicephalus microplus TaxID=6941 RepID=UPI001889348C)

HSP 1 Score: 355 bits (911), Expect = 1.720e-100
Identity = 243/620 (39.19%), Postives = 317/620 (51.13%), Query Frame = 1
Query: 1267 SLARRLHPHQREGLKVLWECLAGRGGYEGRGAILADEMGLGKTATAIALCTCVLR---HRRAECL-KAVVVCPSSLVRNWANEFKKWCP-LGANAVPVDQAGAAAAQLVADFKIGAPSAYPILVISYELYRNHGKVINATSGLGLLIADEGHRLKNSSETKTTRALKACPAVMRLVLTGTPMQNDLDEFFAVADFVNPGLLGSLKSFRSRYTRPIKAAWDRDADEDVADFSTERTRELAQITGKFVLRRTKDVIRGSLPPASEVVIFCRPSARQLSLYESCIASS---ADARSLLYGDAERGGGXXXXXXXXXXXXQLDGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRPVSLQGVLPLISTLRRLCNHPDLVAGTDGVVASGGGGLGGESNVEDARDDTLGELRGNGGGKENSRSTVTASRAAFKRPWKVPRSSGGVVAAAAAMVEPRYETEASGKLLVLEALLKAVRREFPCDKVVVTSNFTSALDVLEKLAERNAWGFLRLDGGTPTNSRQNLVDRFNKAPPENAFLFFLSAKAGGVGLNLVGANRIVLFDSDWNPATDDQAMARVWRLGQTKKVWMYRLLSTGTLEESIFQRQIFKGALYDLIQDSNE 3102
            SL R L PHQREG+  L+EC+     ++G GAILADEMGLGKT   I L   +LR   +    CL K ++V PSSLV+NW  EFKKW P        VDQ          D  +  PS YP+L++SYE+Y      ++  +   LLI DE HRLKN++  KTT +L+    + R++LTGTP+QNDL EFFA+ DF NPG+LG   SFR  Y  PI  +    A E+  +    R  EL Q T  F+LRRT+DVI+  LP   E V+FCRP   QL+LY++ + +S   A   S L  DA                                                                 L  I  LR+LCNHP LVA                S     +D+ +G    +   +   +S           P  +   SG                  SGKL+VL A+L ++    P +++V+ SNFT  LD+LE +  +  + FLRLDG T +  R  LV+RFN +P  N F+F LS KAGGVGLNLVGA+RIVL+D DWNPA D QAMARVWR GQ++ V +YRLL+TGT+EE IFQRQ+ K  L   + DS +
Sbjct:  306 SLTRCLRPHQREGVVFLYECIMQMRAFDGCGAILADEMGLGKTLQCITLIWTLLRQGPYGGQPCLRKVIIVTPSSLVKNWVKEFKKWLPNRNLRVYHVDQNNKI------DIFLNDPSMYPVLILSYEMYMRASDRLSRIN-FDLLICDEAHRLKNAN-IKTTESLQNLGTLRRILLTGTPVQNDLQEFFALVDFCNPGILGKSSSFRRIYEEPILRSQLPGATEEEKELGPARANELMQTTSPFILRRTQDVIQSYLPGKVECVVFCRPQPLQLALYQNMLETSMVRACLSSYLSTDANCH--------------------------------------------------------------LACILALRKLCNHPLLVA----------------SQEFADKDEDVGLAALHAEARRGLQSEFD--------PTMMELESG------------------SGKLVVLAAMLHSLWTSQPRERIVLVSNFTKTLDILEDICMQKGYPFLRLDGSTSSTQRLELVERFN-SPHSNCFVFLLSCKAGGVGLNLVGASRIVLYDVDWNPANDLQAMARVWRDGQSRHVSIYRLLTTGTIEEKIFQRQVTKQELSGAVLDSKK 812          
BLAST of mRNA_P-littoralis_Contig61.111.2 vs. uniprot
Match: A0A8D2Q142_VARKO (RAD54 homolog B n=2 Tax=Varanus komodoensis TaxID=61221 RepID=A0A8D2Q142_VARKO)

HSP 1 Score: 352 bits (902), Expect = 3.080e-100
Identity = 238/616 (38.64%), Postives = 321/616 (52.11%), Query Frame = 1
Query: 1270 LARRLHPHQREGLKVLWECLAGRGGYEGRGAILADEMGLGKTATAIALCTCVLRHR----RAECLKAVVVCPSSLVRNWANEFKKWCPLGANAVPV---DQAGAAAAQLVADFKIGAPSAYPILVISYELYRNHGKVINATSGLGLLIADEGHRLKNSSETKTTRALKACPAVMRLVLTGTPMQNDLDEFFAVADFVNPGLLGSLKSFRSRYTRPIKAAWDRDADEDVADFSTERTRELAQITGKFVLRRTKDVIRGSLPPASEVVIFCRPSARQLSLYESCIASSADARSLLYGDAERGGGXXXXXXXXXXXXQLDGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRPVSLQGVLPLISTLRRLCNHPDLVAGTDGVVASGGGGLGGESNVEDARDDTLGELRGNGGGKENSRSTVTASRAAFKRPWKVPRSSGGVVAAAAAMVEPRYETEASGKLLVLEALLKAVRREFPCDKVVVTSNFTSALDVLEKLAERNAWGFLRLDGGTPTNSRQNLVDRFN-KAPPENAFLFFLSAKAGGVGLNLVGANRIVLFDSDWNPATDDQAMARVWRLGQTKKVWMYRLLSTGTLEESIFQRQIFKGALYDLIQD 3093
            +   L PHQREG+  L+EC+ G       GAILADEMGLGKT   IAL   +LR      +    +A++V P SLV+NW  EF+KW  LG   + V   DQ        V +F I +P  +P+L+ISYE++      I  T   GL++ DEGHRLKNSS  KTT AL + P   R++L+GTP+QNDL EF+A+ +FVNPG+LGSL ++R  Y  PI+ + +  A ++  +    R  ELA++TG F+LRRT+DVI   LPP  E ++FCRP+A QL LY   ++S    +S L G  E                                                                L  I  L++LCNHP L+  T                +E   D T         G E  +  +             P S               +    SGKL VL  LL A+R   P ++VV+ SN+T  LD+L+++ +R+ + + RLDG TP + RQ +VD FN K  P  AF+F LS+KAGGVGLNL+GA+ ++L+D DWNPATD QAMARVWR GQ + V +YRLL+TGT+EE I+QRQI K  L   + D
Sbjct:  230 IVTHLRPHQREGILFLYECVMGMRANMKFGAILADEMGLGKTLQCIALTWTLLRQGPYGGKPIIKQALIVAPGSLVKNWGKEFQKW--LGNERLKVFLVDQD-----HKVEEF-INSPL-HPVLIISYEMFLRSLDQIQKTE-FGLVVCDEGHRLKNSS-IKTTTALASLPCERRVILSGTPVQNDLQEFYALIEFVNPGILGSLSAYRKVYEEPIRRSREPSATKEEIELGERRAEELARLTGLFILRRTQDVINKFLPPKRESILFCRPTALQLDLYRRLLSSQV-VKSCLQGSLEN------------------------------------------------------------SPHLICIGALKKLCNHPCLLFKTI---------------LEKGHDPT---------GDEQVKQNLCEGLLDIFSQGCPPAS---------------FSESDSGKLKVLVQLLAAIREFSPSERVVLVSNYTQTLDILQEVCKRSGYCYTRLDGNTPVSQRQQIVDAFNGKFCP--AFIFLLSSKAGGVGLNLIGASHLILYDIDWNPATDIQAMARVWRDGQKRTVHIYRLLTTGTIEEKIYQRQISKQGLSGAVVD 732          
BLAST of mRNA_P-littoralis_Contig61.111.2 vs. uniprot
Match: UPI001895261B (DNA repair and recombination protein RAD54B-like n=1 Tax=Rhipicephalus sanguineus TaxID=34632 RepID=UPI001895261B)

HSP 1 Score: 354 bits (908), Expect = 4.370e-100
Identity = 245/629 (38.95%), Postives = 320/629 (50.87%), Query Frame = 1
Query: 1267 SLARRLHPHQREGLKVLWECLAGRGGYEGRGAILADEMGLGKTATAIALCTCVLR---HRRAECL-KAVVVCPSSLVRNWANEFKKWCP-LGANAVPVDQAGAAAAQLVADFKIGAPSAYPILVISYELYRNHGKVINATSGLG--LLIADEGHRLKNSSETKTTRALKACPAVMRLVLTGTPMQNDLDEFFAVADFVNPGLLGSLKSFRSRYTRPIKAAWDRDADEDVADFSTERTRELAQITGKFVLRRTKDVIRGSLPPASEVVIFCRPSARQLSLYESCIASS---ADARSLLYGDAERGGGXXXXXXXXXXXXQLDGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRPVSLQGVLPLISTLRRLCNHPDLVAGTDGVVASGGGGLGGESNVEDARDDTLGELRGNGGGKENSRSTVTASRAAFKR-------PWKVPRSSGGVVAAAAAMVEPRYETEASGKLLVLEALLKAVRREFPCDKVVVTSNFTSALDVLEKLAERNAWGFLRLDGGTPTNSRQNLVDRFNKAPPENAFLFFLSAKAGGVGLNLVGANRIVLFDSDWNPATDDQAMARVWRLGQTKKVWMYRLLSTGTLEESIFQRQIFKGALYDLIQDSNE 3102
            SLAR L PHQREG+  L+EC+     ++G GAILADEMGLGKT   I L   +LR   +    CL K ++V PSSLV+NW  EFKKW          VDQ          D  +  PS YP+L++SYE+Y    ++ N+ +G+   LLI DE HRLKN++  KTT +L     + R++LTGTP+QNDL EFFA+ DF NPG+LG   SFR  Y  PI  +    A E+  +    R  EL Q T  F+LRRT+DVI+  LP   E V+FCRP   QL+LY++ + ++   A   S L  DA                                                                 L  I  LR+LCNHP LVA                S     +DD  G               + A  A  +R       P  +   SG                  SGKL+VL A+L ++    P +++V+ SNFT  LD+LE +  +  + FLRLDG T +  R  LV+RFN +P  N F+F LS KAGGVGLNLVGA+RIVL+D DWNPA D QAMARVWR GQ++ V +YRLL+TGT+EE IFQRQ+ K  L   + ++ +
Sbjct:  306 SLARCLRPHQREGVVFLYECIMQMRAFDGCGAILADEMGLGKTLQCITLIWTLLRQGPYGGQPCLRKIIIVTPSSLVKNWVKEFKKWLQNRNLRVYHVDQNNKI------DVFLNQPSTYPVLILSYEMYM---RISNSLAGINFDLLICDEAHRLKNAN-IKTTESLHNLGTLRRILLTGTPVQNDLQEFFALVDFCNPGILGKSSSFRRIYEEPILRSQLPGATEEEKELGQARANELMQATSPFILRRTQDVIQSYLPGKVECVVFCRPQPLQLALYQNMLKTNMVRACLSSYLSTDANCH--------------------------------------------------------------LACILALRKLCNHPLLVA----------------SQEFADKDDDAG---------------LAALHAEARRVLPPEFNPMTMDLESG------------------SGKLMVLAAMLHSLWTSLPRERIVLVSNFTKTLDILEDVCMQKGYPFLRLDGSTSSTQRLELVERFN-SPHSNCFVFLLSCKAGGVGLNLVGASRIVLYDVDWNPANDLQAMARVWRDGQSRHVSIYRLLTTGTIEEKIFQRQVTKQELSGAVLENKK 812          
BLAST of mRNA_P-littoralis_Contig61.111.2 vs. uniprot
Match: A0A8C9W359_SCLFO (RAD54 homolog B n=1 Tax=Scleropages formosus TaxID=113540 RepID=A0A8C9W359_SCLFO)

HSP 1 Score: 344 bits (883), Expect = 8.140e-100
Identity = 245/644 (38.04%), Postives = 325/644 (50.47%), Query Frame = 1
Query: 1222 EWT---AGDPPRPLLAGASLARRLHPHQREGLKVLWECLAGRGGYEGRGAILADEMGLGKTATAIALCTCVLRH----RRAECLKAVVVCPSSLVRNWANEFKKWCPLGANAV---PVDQAGAAAAQLVADFKIGAPSAYPILVISYELYRNHGKVINATSGLGLLIADEGHRLKNSSETKTTRALKACPAVMRLVLTGTPMQNDLDEFFAVADFVNPGLLGSLKSFRSRYTRPIKAAWDRDADEDVADFSTERTRELAQITGKFVLRRTKDVIRGSLPPASEVVIFCRPSARQLSLYESCIASSADARSLLYGDAERGGGXXXXXXXXXXXXQLDGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRPVSLQGVLPLISTLRRLCNHPDLVAGTDGVVASGGGGLGGESNVEDARDDTLGELRGNGGGKENSRSTVTASRAAFKRPWKVPRSSGGVVAAAAAMVEPRYETEASGKLLVLEALLKAVRREFPCDKVVVTSNFTSALDVLEKLAERNAWGFLRLDGGTPTNSRQNLVDRFNKAPPENAFLFFLSAKAGGVGLNLVGANRIVLFDSDWNPATDDQAMARVWRLGQTKKVWMYRLLSTGTLEESIFQRQIFKGALYDLIQDSNEASGAHSS 3123
            +WT    G P   ++    L  RL PHQREG+  L+EC+ G       GAILADEMGLGKT   I L   +LR           +A+VV P SLV+NWA EF KW  LG   +    VDQ        V +F + +P  + +LVISYE+     + ++     GL++ DEGHRLKNS+  KT+ AL +     R++LTGTP+QNDL EF+A+ +FVNPG+LGS  ++R  Y  PI  +    A E+      ER  EL  +TG F+LRRT+++I   LPP  E ++FCRPS  QL +Y   +      R+ L G  E                                                                L  I  L++LCNHP L+  T  V   G      +S  +D  + TL +                      +  +    S+GG            + T  SGKLLVL  LL AV+   P D+VV+ SN+T  LD+L+ L     + F RLDG TP   RQ LVDRFN     + F+F LS+KAGGVGLNLVGA+ ++L+D DWNPA D QAMARVWR GQ K V +YRLL+TGT+EE I+QRQ+ K  L   + DS++ +  HSS
Sbjct:    9 QWTFNQGGLPVVDVVVDPHLTSRLRPHQREGVLFLYECVMGMRATRRHGAILADEMGLGKTLQCITLVWTLLRQGPYGSHPVARRALVVTPGSLVKNWAAEFNKW--LGKERIGVFTVDQD-----HRVEEF-LSSPR-FTVLVISYEMLLRSVEQVSRVE-FGLVVCDEGHRLKNSN-IKTSTALSSLACNRRIILTGTPVQNDLQEFYAIIEFVNPGVLGSPSAYRKVYEEPIVRSRQPSATEEEKRLGEERAAELNCLTGLFILRRTQEIINRYLPPKLEWIVFCRPSQLQLEVYRKLLTHRV-VRACLQGALEN------------------------------------------------------------SPHLVCIGALKKLCNHPSLLYAT--VQEKG------DSIAQDPSESTLYQ--------------------GLEELFPEGYSAGG------------FHTAHSGKLLVLCDLLAAVKEFSPSDRVVLVSNYTQTLDLLQDLCGHLGYSFCRLDGQTPVAQRQRLVDRFNNRYSTD-FVFLLSSKAGGVGLNLVGASHLILYDIDWNPANDIQAMARVWRDGQRKTVHIYRLLTTGTIEEKIYQRQVSKQGLSGAVVDSSKRA-EHSS 538          
BLAST of mRNA_P-littoralis_Contig61.111.2 vs. uniprot
Match: UPI001899AA45 (DNA repair and recombination protein RAD54B-like isoform X1 n=2 Tax=Dermacentor silvarum TaxID=543639 RepID=UPI001899AA45)

HSP 1 Score: 352 bits (903), Expect = 2.070e-99
Identity = 245/621 (39.45%), Postives = 313/621 (50.40%), Query Frame = 1
Query: 1267 SLARRLHPHQREGLKVLWECLAGRGGYEGRGAILADEMGLGKTATAIALCTCVLRHR----RAECLKAVVVCPSSLVRNWANEFKKWCP-LGANAVPVDQAGAAAAQLVADFKIGAPSAYPILVISYELYRNHGKVINATSGLGLLIADEGHRLKNSSETKTTRALKACPAVMRLVLTGTPMQNDLDEFFAVADFVNPGLLGSLKSFRSRYTRPIKAAWDRDADEDVADFSTERTRELAQITGKFVLRRTKDVIRGSLPPASEVVIFCRPSARQLSLYESCIASS---ADARSLLYGDAERGGGXXXXXXXXXXXXQLDGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRPVSLQGVLPLISTLRRLCNHPDLVAGTDGVVASGGGGLGGESNVEDARDDTLGELRGNGGGKENSRSTVTASRAAFKRPWKVPRSSGGVVAAAAAMVEPRYETEA-SGKLLVLEALLKAVRREFPCDKVVVTSNFTSALDVLEKLAERNAWGFLRLDGGTPTNSRQNLVDRFNKAPPENAFLFFLSAKAGGVGLNLVGANRIVLFDSDWNPATDDQAMARVWRLGQTKKVWMYRLLSTGTLEESIFQRQIFKGALYDLIQDSNE 3102
            SLAR L PHQREGL  L+EC+     ++G GAILADEMGLGKT   IAL   +LR      +    K ++V PSSLV+NW  EFKKW          VDQ          D  +  PS YP+L++SYE+Y      + A+    LLI DE HRLKN++  KTT +L     + R++LTGTP+QNDL EFFA+ DF NPG+LG   SFR  Y  PI  +    A E+  +    R  EL Q+T  F+LRRT+DVI+  LP   E V+FCRP   QL LY++ + ++   A   + L  DA                                                                 L  I  LR+LCNHP LVA  D                EDA   TL                     A  +R       S               + EA SGKL VL A+L ++    P +++V+ SNFT  LD+LE +  +  + FLRLDG T +  R  LV+RFN +P  N F+F LS KAGGVGLNLVGA+RIVL+D DWNPA D QAMARVWR GQ++ V +YRLL+TGT+EE IFQRQ+ K  L   + D+ +
Sbjct:  305 SLARCLRPHQREGLVFLYECIMQMRAFDGCGAILADEMGLGKTLQCIALIWTLLRQGPYGGQPFLRKIIIVTPSSLVKNWVKEFKKWLQNRNLRVYHVDQNNKI------DVFLNQPSIYPVLILSYEMYMRVSNSL-ASINFDLLICDEAHRLKNAN-IKTTESLYNLGTLRRILLTGTPVQNDLQEFFALVDFCNPGILGKSASFRRIYEEPILRSQLPGATEEEKELGQARANELMQVTAPFILRRTQDVIQSYLPGKVECVVFCRPQPLQLMLYQNLLDTNMVRACLSNYLSTDANC--------------------------------------------------------------TLACILALRKLCNHPLLVASQDF-----------SDKDEDAGSATL--------------------HAEARRGLNSELDS------------MMMDLEAGSGKLRVLAAMLHSLWTSLPRERIVLVSNFTKTLDILEDVCTQKEYPFLRLDGSTSSMQRLELVERFN-SPHSNCFVFLLSCKAGGVGLNLVGASRIVLYDVDWNPANDLQAMARVWRDGQSRHVSIYRLLTTGTIEEKIFQRQVTKQELSGAVLDNKK 811          
BLAST of mRNA_P-littoralis_Contig61.111.2 vs. uniprot
Match: R7QM18_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QM18_CHOCR)

HSP 1 Score: 352 bits (903), Expect = 4.630e-99
Identity = 245/632 (38.77%), Postives = 325/632 (51.42%), Query Frame = 1
Query: 1249 PLLAGASLARRLHPHQREGLKVLWECLAG---RGGYEGRGAILADEMGLGKTATAIALCTCVLRHR---RAECLKAVVVCPSSLVRNWANEFKKWCPLGANAV-PVDQAGAAAA----QLVADFKIGAPSAYPILVISYELYRNHGKVINATSGLGLLIADEGHRLKNSSETKTTRALKACPAVMRLVLTGTPMQNDLDEFFAVADFVNPGLLGSLKSFRSRYTRPIKAAWDRDADEDVADFSTERTRELAQITGKFVLRRTKDVIRGSLPPASEVVIFCRPSARQLSLYESCIASSADARSLLYGDAERGGGXXXXXXXXXXXXQLDGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRPVSLQGVLPLISTLRRLCNHPDLVAGTDGVVASGGGGLGGESNVEDARDDTLGELRGNGGGKENSRSTVTASRAAFKRPWKVPRSSGGVVAAAAAMVEPRYETEASGKLLVLEALLKAVRREFPCDKVVVTSNFTSALDVLEKLAERNAWGFLRLDGGTPTNSRQNLVDRFNKAPPENAFLFFLSAKAGGVGLNLVGANRIVLFDSDWNPATDDQAMARVWRLGQTKKVWMYRLLSTGTLEESIFQRQIFKGALYDLIQDSNEASG 3111
            P++    LA+R+ PHQREG+K L+ C+ G     G  G+GAILADEMGLGK+  AI L   VL+          KAV+VCP+SLV+NW NE KKW  LG + + PV  A  ++     + +A F  G  +   +L+ISYE++R++ + +   S +GLL+ DEGHRLK+S   KT  ALK  P   R++LTGTP+QNDL+EFFAV DFVNPG L SL SFR+ +  PI A+ D +A          R REL +IT +FVLRRT +++   LPP  EV IFCR   RQ + YE      A +R  +  +  R                                                               L  I+ LR++C HPDLV          G  L       D+ D+ LG                      F    +V      V+         +++   S K+ +  ++ KA  R    D+V++ SN+TS LD L++   R    F RLDG T    R ++V RFN     + FL  LSAKAGGVGLNL+GANR++LFD DWNPATD QAMARVWR GQ K V++YRLL TGT+EE IFQRQ+FKG L   +   +   G
Sbjct:  215 PIVLDPFLAKRMRPHQREGVKFLYHCVQGLFFMTGEGGQGAILADEMGLGKSLQAIGLIWTVLKQHPGGNPGVRKAVIVCPASLVQNWVNEVKKW--LGDDRLEPVAVASGSSTFESKEALAAFING--NVRRLLIISYEMFRSYAEQMYK-SKIGLLVCDEGHRLKSSQGNKTIEALKKLPCRGRVILTGTPVQNDLEEFFAVCDFVNPGCLNSLASFRTVFANPIIASRDSNASNSAMTIGDSRARELGRITSQFVLRRTSNILAKYLPPKHEVAIFCRLQQRQQTAYEK----EAQSRFAVVSNTRR-----------------------------------------------------------FSAALSAINFLRKICCHPDLV----------GASL-------DSEDEDLG----------------------FSDEEEVVHDKKEVLR--------QFQIGDSSKIQITLSICKASLRVQ--DRVILVSNYTSTLDFLQEALSRKNIQFCRLDGSTTVGHRGDIVRRFNAGSLGDVFL--LSAKAGGVGLNLIGANRLILFDPDWNPATDLQAMARVWRDGQKKHVFVYRLLCTGTIEEKIFQRQLFKGELQSAVDREHHRDG 727          
BLAST of mRNA_P-littoralis_Contig61.111.2 vs. uniprot
Match: UPI0010FAE37E (LOW QUALITY PROTEIN: DNA repair and recombination protein RAD54B n=1 Tax=Labrus bergylta TaxID=56723 RepID=UPI0010FAE37E)

HSP 1 Score: 349 bits (895), Expect = 2.490e-98
Identity = 248/647 (38.33%), Postives = 327/647 (50.54%), Query Frame = 1
Query: 1222 EWT---AGDPPRPLLAGASLARRLHPHQREGLKVLWECLAGRGGYEGRGAILADEMGLGKTATAIALCTCVLRHR----RAECLKAVVVCPSSLVRNWANEFKKWCPLGANAVPV---DQAGAAAAQLVADFKIGAPSAYPILVISYELYRNHGKVINATSGLGLLIADEGHRLKNSSETKTTRALKACPAVMRLVLTGTPMQNDLDEFFAVADFVNPGLLGSLKSFRSRYTRPIKAAWDRDADEDVADFSTERTRELAQITGKFVLRRTKDVIRGSLPPASEVVIFCRPSARQLSLYESCIASSADARSLLYGDAERGGGXXXXXXXXXXXXQLDGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRPVSLQGVLPLISTLRRLCNHPDLVAGTDGVVASGGGGLGGESNVEDARDDTLGELRGNGGGKENSRSTVTASRAAFKRPWKVPRSSGGVVAAAAAMVEPRYETEASGKLLVLEALLKAVRREFPCDKVVVTSNFTSALDVLEKLAERNAWGFLRLDGGTPTNSRQNLVDRFNKAPPENAFLFFLSAKAGGVGLNLVGANRIVLFDSDWNPATDDQAMARVWRLGQTKKVWMYRLLSTGTLEESIFQRQIFKGALYDLIQDSNEASGAHSSSST 3132
            +W+   AG P   ++    L   L PHQR+GL  L+EC+ G       GAILADEMGLGKT  ++ L   +L+      +A   + +VV P SLV+NW  EF KW  LG   + V   DQ        V  F +     + +LVISYE+     + +      GL+I DEGHRLKNS+  KT+ AL +     R++LTGTP+QNDL EF+A+ +FVNPG+LGS  ++R  Y  PI  +      E+V     ER  EL+++TG F+LRRT+++I   LPP  +  +FC PS  QL LYE  +      R+ L G  +                                                                L  I+ L++LCNHP L+  T      GG       ++E +  D L EL                    F   +    SSGG+             T  SGKLLVL  LL A+R+  P D+VVV SN+T  LD+L+ L     + F RLDG TPTN RQ LVD FN +P  N FLF LS+KAGGVGLNLVGA+ +VL+D DWNPA D QAMARVWR GQ K V +YRLL+ GT+EE IFQRQ+ K  L   + D  + +  H+S S+
Sbjct:  304 QWSNNKAGLPVVDVVIDPHLTHHLRPHQRDGLLFLYECVTGMRAVGRYGAILADEMGLGKTLQSVXLSWTLLKQGPYGGKAVAKRVLVVTPGSLVQNWGAEFNKW--LGRERISVFTVDQD-----HRVEQFVLSP--LHSVLVISYEMLLRCLEQVQKVE-FGLIICDEGHRLKNST-IKTSSALCSLSCTRRVILTGTPVQNDLQEFYAIIEFVNPGILGSSTAYRKVYEEPILRSRQPSCTEEVRVLGEERAAELSRLTGMFILRRTQEIINRYLPPRLDWTLFCEPSPLQLELYEQLLCHRV-FRACLQGSTQT------------------------------------------------------------HTHLACITALKKLCNHPGLLHSTVKGRTDGG-------SLESSLYDGLIEL--------------------FPESY----SSGGL------------NTADSGKLLVLSDLLTAIRQLSPSDRVVVVSNYTKTLDLLQDLCAHMGYTFCRLDGQTPTNQRQRLVDNFN-SPYSNHFLFLLSSKAGGVGLNLVGASHLVLYDIDWNPANDIQAMARVWRDGQKKTVHIYRLLTAGTIEERIFQRQVSKQGLSGTVVDLGKGA-EHTSFSS 833          
BLAST of mRNA_P-littoralis_Contig61.111.2 vs. uniprot
Match: A0A517LQ73_9PEZI (Uncharacterized protein n=3 Tax=Venturia TaxID=5024 RepID=A0A517LQ73_9PEZI)

HSP 1 Score: 347 bits (891), Expect = 8.950e-98
Identity = 235/629 (37.36%), Postives = 322/629 (51.19%), Query Frame = 1
Query: 1270 LARRLHPHQREGLKVLWECLAGRGGYEGRGAILADEMGLGKTATAIALCTCVLRHRRAE-----CLKAVVVCPSSLVRNWANEFKKWCPLGANAVPVDQAGAAAAQLVADFKIGAPSAYPILVISYELYRNHGKVINATSGLGLLIADEGHRLKNSSETKTTRALKACPAVMRLVLTGTPMQNDLDEFFAVADFVNPGLLGSLKSFRSRYTRPIKAAWDRDADEDVADFSTERTRELAQITGKFVLRRTKDVIRGSLPPASEVVIFCRPSARQLSLYESCIASSADARSLLYGDAERGGGXXXXXXXXXXXXQLDGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRPVSLQGVLPLISTLRRLCNHPDLVAGTDGVVASGGGGLGGESNVEDARDDTLGELRGNGGGKENSRSTVTASRAAFKRPWKVPRSSGGVVAAAAAMVEPRYETEASGKLLVLEALLKAVRREFPCDKVVVTSNFTSALDVLEKLAERNAWGFLRLDGGTPTNSRQNLVDRFNKAPPENAFLFFLSAKAGGVGLNLVGANRIVLFDSDWNPATDDQAMARVWRLGQTKKVWMYRLLSTGTLEESIFQRQIFKGALYDLIQDSNEASGAHSSSSTGAV 3141
            LAR L  HQREG+K ++EC+ G     G GAILADEMGLGKT   IAL   +L+    +       KA++VCP +L++NW  EF+KW  LG + V V          + DF  G    Y +++I YE  R   K +N    + ++IADEGHRLK +++ K   A+++     R+VL+GTP+QNDL EFFA+ D VNPGLLG   +F+  +  PI  A   +A     +    R+ ELA++TG+F+LRRT DVI   LPP +E ++FCRP+  Q +LY + + S   A S+  G  E                                                          VSLQ    LI+ L+++CN P L+                + + ED  D T               ST+ AS      P K  +   G                AS K+LVL +LL  +R     +K+V+ SN+TS LD+L  L   + + FLRLDG TP + RQ LVD+FNK  PE +F F LSAKAGG GLNL+GA+R+VLFD DWNPATD QAMAR+ R GQ    ++YR +  G L+E I+QRQ+ K  L D + DS +++   S     A+
Sbjct:  280 LARHLRDHQREGVKFMYECVMGMR-ESGEGAILADEMGLGKTLQTIALLWTLLKQGPIDGNAPVVKKALIVCPVTLIQNWRKEFRKW--LGTDKVGVFVVDNDKKIRIKDFTKGR--IYNVMIIGYEKLRTVQKELNEGDAIDIVIADEGHRLK-TAQNKAAAAIRSLRTERRIVLSGTPLQNDLSEFFAMVDLVNPGLLGKYTTFKREFETPIIKARQPEATAKDTEKGEGRSEELARLTGQFILRRTADVIAKYLPPKTETILFCRPTPPQAALYRAVLESPMFAASMGSGSTE----------------------------------------------------------VSLQ----LINILKKICNSPALLT---------------KQSPEDNSDST---------------STLLASL-----PSKFLKVDNG----------------ASAKILVLNSLLHQLRNNTQ-EKIVLVSNYTSTLDILGNLLTSHGYNFLRLDGSTPASKRQVLVDKFNKEKPEQSFAFLLSAKAGGAGLNLIGASRLVLFDVDWNPATDLQAMARIHRDGQKHHCFIYRFVVKGALDEKIYQRQVTKMGLADAVVDSKKSNQTFSKEELKAL 788          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig61.111.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LMS0_ECTSI0.000e+062.92SNF2-related domain-containing protein n=1 Tax=Ect... [more]
A0A6H5JTI7_9PHAE0.000e+061.80Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
UPI001889348C1.720e-10039.19DNA repair and recombination protein RAD54B-like n... [more]
A0A8D2Q142_VARKO3.080e-10038.64RAD54 homolog B n=2 Tax=Varanus komodoensis TaxID=... [more]
UPI001895261B4.370e-10038.95DNA repair and recombination protein RAD54B-like n... [more]
A0A8C9W359_SCLFO8.140e-10038.04RAD54 homolog B n=1 Tax=Scleropages formosus TaxID... [more]
UPI001899AA452.070e-9939.45DNA repair and recombination protein RAD54B-like i... [more]
R7QM18_CHOCR4.630e-9938.77Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
UPI0010FAE37E2.490e-9838.33LOW QUALITY PROTEIN: DNA repair and recombination ... [more]
A0A517LQ73_9PEZI8.950e-9837.36Uncharacterized protein n=3 Tax=Venturia TaxID=502... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig61contigP-littoralis_Contig61:621356..632925 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D8LMS0
Preferred nameRAD54B
PFAMsDUF2439,Helicase_C,SNF2_N
Model size4541
Max annot lvl2759|Eukaryota
KEGG koko:K06811,ko:K10779,ko:K10875,ko:K10877
KEGG Pathwayko03440,ko05226,map03440,map05226
Hectar predicted targeting categoryother localisation
GOsGO:0000003,GO:0000280,GO:0000724,GO:0000725,GO:0000819,GO:0003674,GO:0003676,GO:0003677,GO:0003678,GO:0003690,GO:0003724,GO:0003824,GO:0004003,GO:0004386,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0006139,GO:0006259,GO:0006281,GO:0006302,GO:0006310,GO:0006312,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0006996,GO:0007049,GO:0007059,GO:0007127,GO:0007131,GO:0007135,GO:0007275,GO:0007568,GO:0008026,GO:0008094,GO:0008150,GO:0008152,GO:0008340,GO:0009314,GO:0009628,GO:0009987,GO:0010212,GO:0010259,GO:0015616,GO:0016043,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0022402,GO:0022414,GO:0030491,GO:0032392,GO:0032501,GO:0032502,GO:0032508,GO:0033554,GO:0034641,GO:0035825,GO:0042221,GO:0042493,GO:0042623,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0045132,GO:0045144,GO:0046483,GO:0048285,GO:0048856,GO:0050896,GO:0051276,GO:0051321,GO:0051716,GO:0061982,GO:0061983,GO:0070035,GO:0070192,GO:0071103,GO:0071704,GO:0071840,GO:0090304,GO:0097159,GO:0098813,GO:0140013,GO:0140097,GO:0140098,GO:1901360,GO:1901363,GO:1903046
Exons11
Evalue0.0
EggNOG OGsCOG0553@1|root,KOG0390@2759|Eukaryota
EC3.6.4.12
DescriptionDNA repair and recombination protein
Cds size3519
COG categoryL
BRITEko00000,ko00001,ko01000,ko03000,ko03036,ko03400,ko04516
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig61.111.2prot_P-littoralis_Contig61.111.2Pylaiella littoralis U1_48polypeptideP-littoralis_Contig61 621662..632209 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791272.2278764-UTR-P-littoralis_Contig61:621355..6216611680791272.2278764-UTR-P-littoralis_Contig61:621355..621661Pylaiella littoralis U1_48UTRP-littoralis_Contig61 621356..621661 +
1680791272.3856442-UTR-P-littoralis_Contig61:632209..6329251680791272.3856442-UTR-P-littoralis_Contig61:632209..632925Pylaiella littoralis U1_48UTRP-littoralis_Contig61 632210..632925 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791272.241849-CDS-P-littoralis_Contig61:621661..6217751680791272.241849-CDS-P-littoralis_Contig61:621661..621775Pylaiella littoralis U1_48CDSP-littoralis_Contig61 621662..621775 +
1680791272.2544239-CDS-P-littoralis_Contig61:622628..6235511680791272.2544239-CDS-P-littoralis_Contig61:622628..623551Pylaiella littoralis U1_48CDSP-littoralis_Contig61 622629..623551 +
1680791272.2658587-CDS-P-littoralis_Contig61:624019..6241791680791272.2658587-CDS-P-littoralis_Contig61:624019..624179Pylaiella littoralis U1_48CDSP-littoralis_Contig61 624020..624179 +
1680791272.2763157-CDS-P-littoralis_Contig61:624728..6248681680791272.2763157-CDS-P-littoralis_Contig61:624728..624868Pylaiella littoralis U1_48CDSP-littoralis_Contig61 624729..624868 +
1680791272.290663-CDS-P-littoralis_Contig61:625322..6254611680791272.290663-CDS-P-littoralis_Contig61:625322..625461Pylaiella littoralis U1_48CDSP-littoralis_Contig61 625323..625461 +
1680791272.305705-CDS-P-littoralis_Contig61:627488..6275861680791272.305705-CDS-P-littoralis_Contig61:627488..627586Pylaiella littoralis U1_48CDSP-littoralis_Contig61 627489..627586 +
1680791272.3191352-CDS-P-littoralis_Contig61:627903..6279941680791272.3191352-CDS-P-littoralis_Contig61:627903..627994Pylaiella littoralis U1_48CDSP-littoralis_Contig61 627904..627994 +
1680791272.3341794-CDS-P-littoralis_Contig61:628853..6295761680791272.3341794-CDS-P-littoralis_Contig61:628853..629576Pylaiella littoralis U1_48CDSP-littoralis_Contig61 628854..629576 +
1680791272.3490868-CDS-P-littoralis_Contig61:630359..6305621680791272.3490868-CDS-P-littoralis_Contig61:630359..630562Pylaiella littoralis U1_48CDSP-littoralis_Contig61 630360..630562 +
1680791272.3608468-CDS-P-littoralis_Contig61:631094..6311551680791272.3608468-CDS-P-littoralis_Contig61:631094..631155Pylaiella littoralis U1_48CDSP-littoralis_Contig61 631095..631155 +
1680791272.3741007-CDS-P-littoralis_Contig61:631342..6322091680791272.3741007-CDS-P-littoralis_Contig61:631342..632209Pylaiella littoralis U1_48CDSP-littoralis_Contig61 631343..632209 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig61.111.2

>prot_P-littoralis_Contig61.111.2 ID=prot_P-littoralis_Contig61.111.2|Name=mRNA_P-littoralis_Contig61.111.2|organism=Pylaiella littoralis U1_48|type=polypeptide|length=1173bp
MEFTCMWSKDAQQKKRKRWTDGVARFFPSTGVLSIWDQDASAKVSSTRLK
PEEAAAVLQEDGDEARVGGISLQIMAAIQQQQQRSQDATAAASTAETTVS
SVAATGGVGDGGGGGSGKEGIASRLGGLAAGGSGFRRGKLGAARRSLQHA
TGPLASGSSSSVSAGAVARTADASSGTSAAGSVKRTGFGGAGRGIGGARR
FHAPRSFSSGTAAQATSNANPPASSSARRETGSCGSAGPAEAGEGPSDFS
GASHGSGASAAGANTATAAAASAVAKTAPGGFSGNHKRGDTHAAGAAASP
EGLVLEWTAGDPPRPLLAGASLARRLHPHQREGLKVLWECLAGRGGYEGR
GAILADEMGLGKTATAIALCTCVLRHRRAECLKAVVVCPSSLVRNWANEF
KKWCPLGANAVPVDQAGAAAAQLVADFKIGAPSAYPILVISYELYRNHGK
VINATSGLGLLIADEGHRLKNSSETKTTRALKACPAVMRLVLTGTPMQND
LDEFFAVADFVNPGLLGSLKSFRSRYTRPIKAAWDRDADEDVADFSTERT
RELAQITGKFVLRRTKDVIRGSLPPASEVVIFCRPSARQLSLYESCIASS
ADARSLLYGDAERGGGGGGGGRGGRGAQQLDGEGELEEEEEEEEEEGGDG
EESEEDGRGKQQQQQQKQRPVSLQGVLPLISTLRRLCNHPDLVAGTDGVV
ASGGGGLGGESNVEDARDDTLGELRGNGGGKENSRSTVTASRAAFKRPWK
VPRSSGGVVAAAAAMVEPRYETEASGKLLVLEALLKAVRREFPCDKVVVT
SNFTSALDVLEKLAERNAWGFLRLDGGTPTNSRQNLVDRFNKAPPENAFL
FFLSAKAGGVGLNLVGANRIVLFDSDWNPATDDQAMARVWRLGQTKKVWM
YRLLSTGTLEESIFQRQIFKGALYDLIQDSNEASGAHSSSSTGAVDKRSS
SSSSSSNGSGSGSTQQMRGKRGGGDDEDSLAAAAAAKGGGAQSSNRGFSQ
EELKELFVLKTETTSDTYDKLRRRRVASAAAAAAATATTTAPEGNSRYEQ
TTAKEPGEERGEGTGQEGDGVIGAALTPVGGEWKDYLGPSEVLDKALRLA
LLEETTGTDAAAFVGDRGGSANNKVATAASSAVTFVREVPRGGEPKQQQQ
QQQSGAEAASRSPFAPRENACI*
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mRNA from alignment at P-littoralis_Contig61:621356..632925+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig61.111.2 ID=mRNA_P-littoralis_Contig61.111.2|Name=mRNA_P-littoralis_Contig61.111.2|organism=Pylaiella littoralis U1_48|type=mRNA|length=11570bp|location=Sequence derived from alignment at P-littoralis_Contig61:621356..632925+ (Pylaiella littoralis U1_48)
AGCAGGCACGCCTGCCCAACACAGAGAGGGAGAGAGAGGTGCGCGCCGCA TACTTCAGCGGCAGCCTGCCCGCAGCGCTTTCGGTGCGCACATCCGGTGC AGTTCTATCCTTGCCGACTGTGCAGCCATCGAGGAGTCGACGCCATGTCC TTGTGGGCGCTGTGTATATCGCCTACGGAAAAGTACTGTCTGTAGTCCCA AATTTTAAATTTGTTTACCCTGCAGCAGCAGCAGCAGCACTCGGAGAGGA AAGAGGAAGGCCGACTGAGTTCGCGCATCTGGAGAAGCCGCAACCTGCCT CCTGCTATGGAATTCACATGCATGTGGTCCAAGGATGCCCAGCAGAAGAA AAGAAAGCGGTGGACGGATGGAGTAGCACGCTTTTTCCCGTCCACGGGTG TACTCAGCATATGGGACCAGGTGTGGTGCGGGCCCGATTTTTCCACTGAT TTTTCGATTTTGCAAGTATGTGTGCACTTTCTGTGCGTCAAAGCAAACCT CCTCATCCGGTCTCCTATTGATCTAACACAGAGAAATGCTGTAGGCTCTG TATCACATACGTAGGCGGTTGCATTAGTACCAGGAAACCAGCAACCATGT TCCCCAATGTAACGCAAGTCCTCAATGTTCTGATTGCCATCGTTTTCATC AACCCCTTACTTCCTTGTACTACGAGCACTCCTGTCAACTCCTGAACAGG AGTTCAGATTCCGCCAAGTTGGCCGGGTTCACCGAACTCTTCAAAAACGC CAATGATTCTTCGCATCCCCTGCAGGTCCGACACCTGTTCGACAAGTAAC CGGTCGAGTGGATACAGCAGTAGGTGGCACGCCCTTTCCTGATTGGTCCA AATGACTTGCGGCGAAATTAGAAATCGAGACGATAGAAGTTCCTTGGATG ACGGTTGGTGTCATTTCAGATCGATCGGGGTGGACGGAATCATTGGCACA GACAGACGGATGCCGCACCTGGAGGGTCACTTGGACTGTAAGACCATCTG GCATGGTCACATTGGACTGTAAACCCATCTGGCAACATCAGAAGGACCTG GAAGATCCCCCACGGAGAACATGCCTTGCTCTCTGGGGCGGGCCCTTCAA ATAAACACGTCATACCCGAAGATATATACCAACGTCATACAGTACCCAAA AGTAGTGTGCGGTATCTTTTCGTCCCCCCCCCCCCCCAACCTGCCGACCC CCCTGCGCCCTGGCTAATTCATCTGCCGCGATGTTTTTTTACTTTCCCAT ACCCCAACCGACCAAACGAAAAGGACGCGTCCGCGAAAGTGTCCTCGACG CGCCTCAAACCCGAAGAAGCCGCCGCCGTCCTGCAAGAAGACGGCGATGA GGCGAGGGTGGGTGGTATCAGCTTACAGATTATGGCCGCAATTCAACAAC AACAGCAGCGCTCGCAAGACGCTACAGCCGCAGCGTCAACAGCGGAGACC ACCGTCAGCAGCGTTGCGGCTACCGGCGGTGTCGGCGACGGCGGCGGCGG CGGTAGTGGCAAAGAAGGAATTGCCTCGCGGCTGGGCGGCCTAGCAGCGG GAGGTTCCGGGTTCAGGCGAGGAAAATTGGGCGCGGCACGCCGGTCGTTG CAACACGCCACCGGCCCTCTCGCCAGCGGTAGCAGCAGCAGCGTGTCAGC AGGAGCGGTGGCAAGAACTGCTGACGCTAGCTCGGGTACCAGTGCCGCCG GCAGCGTCAAACGAACGGGGTTCGGGGGCGCCGGGAGAGGTATCGGCGGG GCGCGGCGCTTCCACGCTCCTCGGTCGTTTTCGTCTGGCACAGCGGCACA GGCGACGTCGAACGCAAATCCACCCGCTTCTTCCTCTGCCCGGCGTGAGA CTGGGAGCTGTGGATCAGCAGGACCAGCAGAAGCAGGTGAAGGACCTTCC GATTTCTCGGGTGCCAGCCACGGGAGTGGTGCTTCAGCCGCTGGTGCAAA CACCGCTACTGCTGCTGCTGCTTCTGCGGTTGCCAAAACGGCCCCAGGAG GCTTCTCCGGGAATCACAAAAGAGGTGACACTCACGCGGCGGGGGCCGCG GCGAGTCCGGAAGGATTGGTCTTGGAGTGGACAGCAGGGGACCCGCCCAG GCCCTTGCTGGCAGGCGCCTCTCTGGCGCGCAGGCTGCACCCTCACCAGC GGGAAGGGCTGAAAGTGCTGTGGGAGTGCCTGGCGGGGCGAGGAGGGTGA GTTGTGTTGCGTGAATGCTGCGAACGACGAGTGTGCGGGGGGGGCAAGAT ATCATATTGTCGACTTTTTCACCCCAGCCAGCCCTGTTCAGCAAAACTCT CAAGTTTTTTTCTTTCAACGCTGGAATATTCAGGCCGGTTACATGCGGGT TCACCTCGCGTGTTGTTGGCCCTTGACACTGTTTGGCCTGATTTGGATTT GACTTGCTGCCGTTGTATCGGGTATCCCTTTATGGTTGAACGTAAGAAGC TGCACCTGATAGTCCAACATCAGTAACAAGACCTTGCCTGCTGCAATCGA GGCTACGAAAGACCGACGAGGCTAAACGAAATTTCCGGGGTTGCCTCGCA AGTGCAACGCTGTCTGTCAGCTCTCACCGGTTGTTCTTCTGTTCTTGGTT GCTGCTGCGGCGGCTGCTGGCGCCGCCGCTGCTGGTGCCTCCGCTGACTG TGCTGCTGCGACAGGTACGAGGGCCGAGGGGCAATTCTGGCAGACGAGAT GGGGCTCGGGAAAACCGCTACGGCAATCGCCCTGTGCACTTGCGTGCTGC GCCACCGCAGGGCGGAGTGCCTGAAGGCGGTCGTGGTGTGTCCGTCTTCG CTCGTCAGGAACTGGGCGAATGAGGTGTGTGTGTGTGTGTGTGTGCAGTT TGCAGTTGCTGGTTGGTTGAAAAATACTGCTTCTCGTGGTTGCACACATG CATATTCAAGACGACGAGTTTGGCCCTTTTCGATTCCCGCGCGGCTCCTC CCTGCCCACGCCGTTCAACATGCACCTCCAGCGCCAACAAAAAACTCACC GTCCCCGGTGCGACTGCTGTGCTGCACGCATCCTTGAATGTTCCTGCGGC GTGTGCGACCATTGTCTGGGCTTAGAGTACGACCGCTCACGCTCCAATCA GCTAAACCAATTATCCCCGGACGATGCCGTGATTTATCAGCGTTTTCGTT ACGCGCGTTGGAACCTCTCTCGTGGGCTGACTCTTTCGTGCACCACCGTG CGTGCACAAAACGCGTGTAAGCGCGCACCCCAGCAAGCGATCCCGCCTGA TTTTGTTCTTTTCTTTTTTTACCATGGGTCCAAACTTGCCCCCAGAACGT GTTGGTTTCGTCGCTCGTCTTCCTCGCGCGTGTGTGTGTGTGTGTGTGTG TGTGTGTGACTGCGCGGCGGCAGTTCAAGAAATGGTGTCCGCTCGGTGCG AACGCGGTCCCCGTTGACCAGGCGGGGGCCGCGGCGGCGCAGCTCGTGGC GGACTTCAAGATCGGAGCGCCGTCCGCCTACCCCATCCTCGTCATCAGCT ACGAGCTCTACAGGTGAAGTTCCACACCACTGCTGCCTGGCGATGTCTGT CGAGCGAGTAGGCAGAACGCAAGGAGAAGAAGCGAGTTCGATTTCCTCGT CATACGGAACATACATTGTCGACGTACTTGGAGGTAGGTGGTAGATAGGT GGGGTTCATTCACAGTCCTGTACGTGCAGTACGTGCTGTGCGAGGTGTGG GGGATGATGCTTCACCCACGTGGGTTGGCAGAGATACAACTTGTTCCTGG AAGGAGAATAATTCGTGTCGCGCAGCCCCGTGCTCCTGCCAGCCCCAAAG TAGAGTCAGCGGTAGGTGTTCCTGTTTCACTGCAAATATCGCAAAGCGGA CATGATTCATGGGATGAAAGTGATCGGCGCTTCACGTGTCATGGTCTCGA CCGATGCTGCGTGGCAGCGGAATGTTTGTTTCACCCCTCTCCTGTGCGCG GCGGGCGGCCTTTGCAGGAATCACGGCAAGGTCATCAACGCAACGAGCGG GCTGGGACTCCTGATTGCCGACGAGGGTCACCGGCTGAAGAATTCATCGG AGACCAAGACCACGAGAGCTCTCAAGGCCTGTCCGGCCGTGATGCGCCTG GTTCTGGTGAGCTTTGGTGTTTGGGAGACGTTGTTGCCGTTTTTGATGCT GCCGTGTTTTATTCTGTGGCAGCGTGGCGGTGTCGTTGGTGTTCTAGTTA AGTTGTGCTGAGAGGCACCGCGTTTGCTTTACGACATACTCGGTGTCCGT GCATGTTGTTGCTTGTGCGTGCCATGTCTACTCGGCAAAATTTCCTTTCT GTACTTCTCACTGTAATATCTGGGGTCAGATACGCTGAGACTGCTCACCC CCCACCCTCCCTCCTGTAGAAACCGCGCTTGTGGTGAGTTGAAAAGTTCC TGGAAAGGCAGTATTTTTTTGCCATTTTATGGACCGAGAGGTGTTGGAGA GTTGCGGAGGCATCCCTGAACACTGATCCTTTTTTTCGCGCACGCGGCAA TAGGAACTCGCTGGTCCAATACCCGTGCCTCCTGGGCTCCTTCAATCGAC CGGCGTTGAGTTCATGAATTGCATAAGTCGCGCCGAGCTTCCGCATCGTA CAGCAGCACTACGGAAAGACCTTACACCCACATTCATGAGATCTTACTAG TTTGGCGAAACCTTGATAAACATTTGTTGAGGCGAATGGTCGATCGGGTA CCGGTGCTTTGGGGTCAGAAGTCTTCATTCGAAAAAAAAATGGTGTTAAA ACGCGACGAAATTGGACTATGGCAACGTCCACCGCGATTTGGACCCCAAA TCAATCACTGCGCCAAAAATCTGAACATAGCGAGCTCGTAGATGGCTTGG TGCAACCCTAGAGTCACTGCCGTGCCAACACCTTGGCCGCTGGTATGTGG CGGAAGCAGGCCAGGCACGTAAGAATAAGTAATTTCAGGAGTGAGATTTT CAAAGGCATTGGCTGACGTGGATGTGACACCTCAGGCACAGCCGTTGACG GCGACATCAGATCACCACAGTTCACGTTTTCGCACCCTACCACCTATCAA GGTGGAACCTTCGTGGGTGTCACCCCCCAGTCGCTGCTCTTTGTCGCCAC ACCTTTATCATAGATCCGCGATGGGCTCATTCAATTGGCCGAGAGAAGCA TGGCTCGTGATCTGACCTGCCAAGCTGAAAATGTAAAATACACATACCCA CTTTTTGCACTCGAAAGTCGATTACGTGCTCAGCCGCCTCAAGAATATTT CTAGAGGCAGATGTTCGATACACAGTTATGCCTCCTTCTGCCGGTTGAAT AAGCCCACCGCGAAGCCAGAGATGTGCCGACACAGGGCAGTGCATTGCAC GGGGGCGACAGCCAGCAAGGTTTCACCTTGACAGGTGGTGTTGGCAGCGA GAACGCGAGAACGCGATTGATTGTGGTGTTCTTATGTCACCTTCATCGGC TATTCCTGAGGTGTCACACGCACGTCAGCCAATGCCTTTCATAATCTCAC CCTTAAAATGATTGGTCTTGCATTCCTGGCGCGCTTCCGCCACACACCAC CGGCCGAGGTGTTGGCACATTGACTCTAGGGGTTGCACCGAGCACTCCAC GATCTCGCTACTGTACGTTCAGATTTCATGGCACAGTGGAACGGGTTGTT GACTGAAGCGTGATGGTGTACCATGATCCCGCCGCCGCAAGTTCTTGGCT ACTTCTGAAATCTGCGAATCTCGGACCAACGTTCGCCAAGTCGGTCCGGT TTCGGCTGATCTTGAAATCTTTTGCGAGATTTTGGACAATTTTTTGTTCT CTTTTCGGCAGAATGAAATTGTATTGTCCTAAACACGTCGGCAAAACTTT CACGTATGATATGTTGGCAATATCTGGCCACCATTAATACGGGTGCTACT TTAGTATAGCCTTCCCGGTATCCCTGTCCCCACTGTCGCCCTTTGAGTCA TGGACGCCACCAGGTTGGCTTGCAGTACACCCACCCACTGATGCACGCCT CCCTCGCACCCCAAGCTGGCCACCCCGTTCGAAAAATGAAATCTGGTAGA AGGGTTCACATGAAATGTTTCCCTACCCCCCTAACACGCTGGTCCCGTCC GATGCTGCCTTTTCCTTGTCGCACCTCTTGTAGACGGGCACTCCGATGCA GAACGACCTGGACGAGTTCTTCGCGGTGGCCGATTTTGTCAACCCTGGTC TACTGGGCAGCCTGAAAAGCTTCCGATCCAGGTTTGATGCTGGCTTGTTT TGTTCATCTCCTCCCGCCGACTTTGTAAAGTTTCGGTTATTTTTGTTCAG CATGAGAACGTGATAGTTGCGTGTGCTCCTCCGAACTCAAAAATCGTTTT TTTTGTTCAGACGTTTTGAGCTTTTTTTTTTGCGCACGAACGCCGCTGCA ACCCAATGTTCCTTTCCTTCCCTGGCTCTCTCTGTTTTTCCCTGTAAATG GCCATTTCATCACCCAACCTAAGACTAACACTATCACCCACACCAATGCC AACGCCGACGCCGACGCCGACGCCACCGCTCCTGCGGCCGCGCGGCAGAT ACACCCGCCCGATCAAGGCAGCGTGGGATCGCGACGCGGACGAGGATGTC GCAGATTTTTCGACGGAAAGGACTCGCGAACTGGCGCAGGTGAAGGCAGG ATGGGATGTAATACGATACGACATGATGCGCTACGTACGCCTTGCTGCGG TGTTCGAAAGAAACCCGCCGCGACGTCCGTTTGAAATTATAAATTTTTCC CTTGAGGGTTTGGTGTTAATTATTTCTTTGCCATGTAATCTGGAGCATCG ACCGGACCCCAGTCCTTCGCTGCTGAAAAGGGTCGCGAAAAGTAAATTCA AGGGTGTTGCTGTTGTGCTTCCACACTTCATACCCGTTTGAGCGGCGGAC TCGTGTACTTCGCACGTTTCAGAAACTTTTGCCGGAGGTCAGTTGCCACT ATTTAAACGAAGAAATATTTTTCCTTTTTTTATACGCATCGTTAATTCAA ACATATTGTAAACTAATTGCTCTTTTTTTTGTGTTCGTTTCATTTTATTG ACGATTGTTTCATGATTTTCTGATATATTCGTCATGTATGGAAAGAATGT GTAATTCTAGAAATATAAACAACAAAAACTTTTGGAAGAAGTCTAACAAA GAGGGTTTTTCAATCCAGTATACGAAGTATAATTTTTTAAACCGATCAGT ATTCTTTACACATGGTCCATTAACAAAGTTTAAGATCTTTTCAGTTCGCG ACCTTACAGTCTCATGTCGACTCCAGTCAGATAGGGCCCGTTCTGTTTGG CGGATTCCTCGCTGTGGCAGTATGCCACCGTCCCCTCCCCCCACATTGTT TGACGATAGTTTATTCCACCGCGGTATATGATATATGTGTGTGTGTGACC GCCACCATCCCCTCCATCCACACTGTTTAACAACAGTTTTTTCCACCGCG GTGTATGTGTGTGTATGCATGTGTGCGTGCGGTTTCTTCCGAGAAAAGAT CACGGGAAAATTCGTCCTGCGTCGAACCAAGGACGTCATCCGAGGGTCCC TTCCCCCGGCGTCGGAGGTGGTGATCTTCTGCCGCCCGTCCGCGCGGCAG CTATCCCTCTACGAGAGCTGCATCGCAAGCTCGGCGGATGCGAGGTCCCT CCTTTACGGTGACGCCGAGAGAGGGGGGGGGGGAGGGGGAGGGGGACGGG GGGGACGGGGGGCACAGCAGTTGGACGGGGAAGGAGAATTAGAGGAGGAG GAGGAGGAGGAGGAGGAGGAAGGAGGGGATGGAGAGGAGAGCGAGGAAGA CGGCAGGGGGAAGCAGCAGCAGCAGCAGCAAAAACAGCGGCCGGTCAGTC TTCAGGGGGTCCTGCCCCTCATATCCACCCTGCGCAGGCTTTGCAACCAT CCGGATCTAGTTGCTGGAACGGACGGCGTCGTTGCCAGCGGCGGCGGCGG GTTGGGCGGTGAAAGCAACGTCGAGGATGCTCGGGACGACACCCTTGGAG AATTGCGTGGGAACGGCGGCGGTAAGGAGAACAGCAGAAGCACCGTCACC GCGAGTCGAGCAGCTTTCAAGCGTCCTTGGAAAGTTCCTCGCTCAAGCGG GGGGGTTGTGGCGGCGGCGGCGGCGATGGTGGAACCTCGGTACGAGACAG AGGCATCTGGAAAGTTGCTGGTGCTAGAGGCGTTGCTGAAGGCCGTTCGG CGAGAGTTTCCTTGCGACAAGGTGCGCGGCCGCTGTTCCCTTGCTTTGTC TCCTCTTAAAAGCTTGCCACAACCCGGCCTTCCTCAGCATGCTTTGTTGT GAGGTGAGGCCGCATTGTCTGCCCTCAACTCACACGACCTTTTTACATCG TGTGATACATTGGAGAAATTTTGTGGAGTAAGGGTGGATAATCGGGGTGA ATAGTTGACTTGTCCTTTTGATCGAGAGATTTGTGAAGGCTCTCATTATT CACATGAGCTCTGCTTGCTTTCCGGAGCCAGCTGCGCGGCTTCCCTCAAA CCACCCGTGCTGGGATTTGGGATCTCCTTGGGCTAGGGGCAGTTACTTTT CATCGCACAATGTTTGGAACGCATCACGCCGCGCTCTGTGGCAAACGCTT GCGGTATTTCCTCGAAAACAAAAAGTGCCATATGTATTTGCATTTCACAC CCACCTCCTTGTATTTCTCCCCGCTTCTTGAAGCTCCCAACTTTCAATTA CGGCCTAGAGCCCACCCTTATACCTCCCGCCGTATTTTCATCGTTCACAC AAAATAATTGGTATGAACGCCACAATTCGCGGTATGTGTAAGAGTTGCCC CTCCCCCGCTCCCTCCCCCGCCCTCTCGCCAAACTAAACCGCACAGAACC GAACCGAACCGAACCGAACCAAGCCGAGAGAAACTAGAGCGAACCGAACT GAACCTAATTGTATCAAAGCGGGCCGGCCGAATATAATCGAGCAGAATGT CAGCCTGAACCAGAAAAATCGAACCGAACCGAACCGAACCGAACCAACTT GAAGGTGGTGGTCACGTCGAACTTCACCTCCGCCTTGGACGTCCTCGAAA AGCTAGCGGAGAGGAACGCCTGGGGTTTCCTGAGGCTGGACGGAGGAACA CCCACCAACTCTCGACAGAACCTCGTCGACCGCTTCAACAAGGCCCCGCC GGAGAATGCTTTCTTGTTTTTCCTTTCGGCGAAGGCGGGCGGCGTTGGCC TCAACTTGTGAGTGTGTTAGGCGATTGGTTGCTGACTCGGACAGGGCGAA GAAGGAGGAAATAAGCTATACTGCTGATGCGAGGGTTAGAGGGGCCGGTG GTGCAGATCGTGAATGCGTGATGGGGCGGGGGGCGGGTGTAGTTTGGGTA TACTCCTGAGAGAGGGAGGGTGGGGGGGTCTACACGCGCATTGCGTCGAC GCTCTGAAAGCTCCCGCAATCTGCAACAACGAAAGGATTTGATCTTGGAT GAACCGAACGCGGCACACTGGTTCCTCCCAAGGTTGAAGACGTGATTCTG ATTGTGTAGGGTTCGCGCGTGTATGAAAAAACCTGCTGTGTGTATCGTGT CCGGAACGGTTTTTTCCCAGGCAAAGGCCGCGCGAGACTGGGACTCGACT CTCGTCATTTATCGCGTTGAAGCTCGGTTTCCGGTCAGCCTGCCCTCGCT GATTTTACCATTCCCTTTATCATGACATTCCCACCTCTTTGTACTGGTAT CTCTACCGACCGCCTCCCTTCTGTTGGTATCTAACCAAGGGTCGGAGCAA ACCGCATCGTCCTGTTCGACTCGGACTGGAACCCAGCCACCGACGATCAG GTGACAGTAAAACCTGTATGACATGACATGAATAACTTTTGTGAAGGGCT GGGCTCGTGGCGTATGTTTCGCAACTTTCCGGTTGTGGGTGGCGATCGAA AAACACCGCGTGTTGGGTCCCCCCCAACCCATCGTTTTATCTGATAGCGC GCTCCTGTCTCTACCCGATCCCAACACTCCCGAATAGGCGATGGCTCGCG TGTGGCGGCTCGGCCAGACGAAGAAAGTGTGGATGTACCGCCTGCTCAGC ACAGGAACACTGGAGGAAAGCATATTCCAGCGCCAAATCTTCAAGGGCGC GCTCTACGACCTTATCCAAGACTCCAACGAAGCAAGCGGTGCGCACAGCA GCAGTAGCACGGGTGCGGTGGACAAAAGAAGCAGCAGCAGCAGCAGCAGC AGCAATGGCAGCGGAAGTGGCAGTACGCAACAAATGCGAGGGAAAAGGGG AGGCGGGGATGACGAGGACAGCCTGGCGGCGGCGGCGGCGGCCAAAGGGG GAGGGGCGCAAAGCAGCAACAGGGGCTTCAGCCAGGAAGAACTCAAAGAA CTGTTTGTTCTCAAGACCGAGACCACAAGTGACACCTACGACAAGCTCCG GCGAAGGCGGGTTGCTTCCGCTGCTGCTGCTGCTGCTGCTACGGCAACGA CGACGGCTCCAGAGGGAAACAGTCGCTACGAGCAAACCACGGCCAAAGAG CCAGGGGAGGAAAGGGGAGAAGGAACCGGCCAAGAAGGTGATGGGGTGAT CGGTGCTGCTCTCACCCCCGTCGGCGGGGAGTGGAAAGACTACCTCGGGC CGTCAGAGGTTTTGGACAAGGCTCTGCGGCTGGCCCTCCTGGAGGAGACG ACGGGGACAGATGCGGCAGCGTTTGTGGGTGACCGCGGCGGGAGCGCGAA CAACAAAGTCGCGACAGCCGCGAGCAGTGCTGTGACCTTTGTGAGGGAGG TGCCAAGGGGCGGAGAGCCAAAGCAGCAGCAGCAGCAGCAGCAGAGTGGA GCGGAGGCCGCTTCTCGTAGCCCATTTGCTCCGAGGGAAAACGCCTGCAT TTAGCCCGAAGGAAAACGGCCGTTTTATTTGCAGTGGTGTGTGTTGAAGG AAGACGAGTGATTGAGTACAAACAGTGCAACGAGAAGGAGCATAGAAAAC TGGCATGGTTCGGGGTTGCCGTTTGGTGTAGAGGCAGCACCGGCAATACA AAAAGGCGATGGTGCCGGCTTTCGGCAAGACGTTGGAAAAGGACGGGGGG GCATATACCCGGAGGCGTGAAAAAAGCAAAATTTCCAGGGGGTGTCTCGG TAACGGTTTTTGATCGCGGTAACGATTCACCGTGGTACTCAACCACCACG GTAATGCGCGGTAATTGGGACCACGGTACGCAACCTTGGTACTCGACCCT ATACTTTGATGTAGATATCACTGTTCGAGTACCACGGTACCACTGTTCGG CAACGAATGGTAATCTCAAAGTTTCACGGTAGCTACCGCGGTACCGGGTA CCGCGGTAAATTACCGCGGTATTTTACCGCGGTAAAACTACCGAGACACC CCTTGAAAATTTCGTAAAGTTTAGGAGGAGGAAGGGTCGGGAAACGCCCT TCATATCGTGGGACCCTCTCGTGCCTTCCGAATGGAGAGCGAATCTGAGC TAGGTATCATAGTAGGACGGACACGAATATATGATACGCATGCACAGATG AATTATATGGTTGTACACGCTCGTTCCCTCAACGCAATAGTACTCGCTTT TCGGGCTGAGCGACAGACCC
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Coding sequence (CDS) from alignment at P-littoralis_Contig61:621356..632925+

>mRNA_P-littoralis_Contig61.111.2 ID=mRNA_P-littoralis_Contig61.111.2|Name=mRNA_P-littoralis_Contig61.111.2|organism=Pylaiella littoralis U1_48|type=CDS|length=3519bp|location=Sequence derived from alignment at P-littoralis_Contig61:621356..632925+ (Pylaiella littoralis U1_48)
ATGGAATTCACATGCATGTGGTCCAAGGATGCCCAGCAGAAGAAAAGAAA
GCGGTGGACGGATGGAGTAGCACGCTTTTTCCCGTCCACGGGTGTACTCA
GCATATGGGACCAGGACGCGTCCGCGAAAGTGTCCTCGACGCGCCTCAAA
CCCGAAGAAGCCGCCGCCGTCCTGCAAGAAGACGGCGATGAGGCGAGGGT
GGGTGGTATCAGCTTACAGATTATGGCCGCAATTCAACAACAACAGCAGC
GCTCGCAAGACGCTACAGCCGCAGCGTCAACAGCGGAGACCACCGTCAGC
AGCGTTGCGGCTACCGGCGGTGTCGGCGACGGCGGCGGCGGCGGTAGTGG
CAAAGAAGGAATTGCCTCGCGGCTGGGCGGCCTAGCAGCGGGAGGTTCCG
GGTTCAGGCGAGGAAAATTGGGCGCGGCACGCCGGTCGTTGCAACACGCC
ACCGGCCCTCTCGCCAGCGGTAGCAGCAGCAGCGTGTCAGCAGGAGCGGT
GGCAAGAACTGCTGACGCTAGCTCGGGTACCAGTGCCGCCGGCAGCGTCA
AACGAACGGGGTTCGGGGGCGCCGGGAGAGGTATCGGCGGGGCGCGGCGC
TTCCACGCTCCTCGGTCGTTTTCGTCTGGCACAGCGGCACAGGCGACGTC
GAACGCAAATCCACCCGCTTCTTCCTCTGCCCGGCGTGAGACTGGGAGCT
GTGGATCAGCAGGACCAGCAGAAGCAGGTGAAGGACCTTCCGATTTCTCG
GGTGCCAGCCACGGGAGTGGTGCTTCAGCCGCTGGTGCAAACACCGCTAC
TGCTGCTGCTGCTTCTGCGGTTGCCAAAACGGCCCCAGGAGGCTTCTCCG
GGAATCACAAAAGAGGTGACACTCACGCGGCGGGGGCCGCGGCGAGTCCG
GAAGGATTGGTCTTGGAGTGGACAGCAGGGGACCCGCCCAGGCCCTTGCT
GGCAGGCGCCTCTCTGGCGCGCAGGCTGCACCCTCACCAGCGGGAAGGGC
TGAAAGTGCTGTGGGAGTGCCTGGCGGGGCGAGGAGGGTACGAGGGCCGA
GGGGCAATTCTGGCAGACGAGATGGGGCTCGGGAAAACCGCTACGGCAAT
CGCCCTGTGCACTTGCGTGCTGCGCCACCGCAGGGCGGAGTGCCTGAAGG
CGGTCGTGGTGTGTCCGTCTTCGCTCGTCAGGAACTGGGCGAATGAGTTC
AAGAAATGGTGTCCGCTCGGTGCGAACGCGGTCCCCGTTGACCAGGCGGG
GGCCGCGGCGGCGCAGCTCGTGGCGGACTTCAAGATCGGAGCGCCGTCCG
CCTACCCCATCCTCGTCATCAGCTACGAGCTCTACAGGAATCACGGCAAG
GTCATCAACGCAACGAGCGGGCTGGGACTCCTGATTGCCGACGAGGGTCA
CCGGCTGAAGAATTCATCGGAGACCAAGACCACGAGAGCTCTCAAGGCCT
GTCCGGCCGTGATGCGCCTGGTTCTGACGGGCACTCCGATGCAGAACGAC
CTGGACGAGTTCTTCGCGGTGGCCGATTTTGTCAACCCTGGTCTACTGGG
CAGCCTGAAAAGCTTCCGATCCAGATACACCCGCCCGATCAAGGCAGCGT
GGGATCGCGACGCGGACGAGGATGTCGCAGATTTTTCGACGGAAAGGACT
CGCGAACTGGCGCAGATCACGGGAAAATTCGTCCTGCGTCGAACCAAGGA
CGTCATCCGAGGGTCCCTTCCCCCGGCGTCGGAGGTGGTGATCTTCTGCC
GCCCGTCCGCGCGGCAGCTATCCCTCTACGAGAGCTGCATCGCAAGCTCG
GCGGATGCGAGGTCCCTCCTTTACGGTGACGCCGAGAGAGGGGGGGGGGG
AGGGGGAGGGGGACGGGGGGGACGGGGGGCACAGCAGTTGGACGGGGAAG
GAGAATTAGAGGAGGAGGAGGAGGAGGAGGAGGAGGAAGGAGGGGATGGA
GAGGAGAGCGAGGAAGACGGCAGGGGGAAGCAGCAGCAGCAGCAGCAAAA
ACAGCGGCCGGTCAGTCTTCAGGGGGTCCTGCCCCTCATATCCACCCTGC
GCAGGCTTTGCAACCATCCGGATCTAGTTGCTGGAACGGACGGCGTCGTT
GCCAGCGGCGGCGGCGGGTTGGGCGGTGAAAGCAACGTCGAGGATGCTCG
GGACGACACCCTTGGAGAATTGCGTGGGAACGGCGGCGGTAAGGAGAACA
GCAGAAGCACCGTCACCGCGAGTCGAGCAGCTTTCAAGCGTCCTTGGAAA
GTTCCTCGCTCAAGCGGGGGGGTTGTGGCGGCGGCGGCGGCGATGGTGGA
ACCTCGGTACGAGACAGAGGCATCTGGAAAGTTGCTGGTGCTAGAGGCGT
TGCTGAAGGCCGTTCGGCGAGAGTTTCCTTGCGACAAGGTGGTGGTCACG
TCGAACTTCACCTCCGCCTTGGACGTCCTCGAAAAGCTAGCGGAGAGGAA
CGCCTGGGGTTTCCTGAGGCTGGACGGAGGAACACCCACCAACTCTCGAC
AGAACCTCGTCGACCGCTTCAACAAGGCCCCGCCGGAGAATGCTTTCTTG
TTTTTCCTTTCGGCGAAGGCGGGCGGCGTTGGCCTCAACTTGGTCGGAGC
AAACCGCATCGTCCTGTTCGACTCGGACTGGAACCCAGCCACCGACGATC
AGGCGATGGCTCGCGTGTGGCGGCTCGGCCAGACGAAGAAAGTGTGGATG
TACCGCCTGCTCAGCACAGGAACACTGGAGGAAAGCATATTCCAGCGCCA
AATCTTCAAGGGCGCGCTCTACGACCTTATCCAAGACTCCAACGAAGCAA
GCGGTGCGCACAGCAGCAGTAGCACGGGTGCGGTGGACAAAAGAAGCAGC
AGCAGCAGCAGCAGCAGCAATGGCAGCGGAAGTGGCAGTACGCAACAAAT
GCGAGGGAAAAGGGGAGGCGGGGATGACGAGGACAGCCTGGCGGCGGCGG
CGGCGGCCAAAGGGGGAGGGGCGCAAAGCAGCAACAGGGGCTTCAGCCAG
GAAGAACTCAAAGAACTGTTTGTTCTCAAGACCGAGACCACAAGTGACAC
CTACGACAAGCTCCGGCGAAGGCGGGTTGCTTCCGCTGCTGCTGCTGCTG
CTGCTACGGCAACGACGACGGCTCCAGAGGGAAACAGTCGCTACGAGCAA
ACCACGGCCAAAGAGCCAGGGGAGGAAAGGGGAGAAGGAACCGGCCAAGA
AGGTGATGGGGTGATCGGTGCTGCTCTCACCCCCGTCGGCGGGGAGTGGA
AAGACTACCTCGGGCCGTCAGAGGTTTTGGACAAGGCTCTGCGGCTGGCC
CTCCTGGAGGAGACGACGGGGACAGATGCGGCAGCGTTTGTGGGTGACCG
CGGCGGGAGCGCGAACAACAAAGTCGCGACAGCCGCGAGCAGTGCTGTGA
CCTTTGTGAGGGAGGTGCCAAGGGGCGGAGAGCCAAAGCAGCAGCAGCAG
CAGCAGCAGAGTGGAGCGGAGGCCGCTTCTCGTAGCCCATTTGCTCCGAG
GGAAAACGCCTGCATTTAG
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