mRNA_P-littoralis_Contig609.46.1 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig609.46.1
Unique NamemRNA_P-littoralis_Contig609.46.1
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
BLAST of mRNA_P-littoralis_Contig609.46.1 vs. uniprot
Match: A0A6H5K6L9_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K6L9_9PHAE)

HSP 1 Score: 259 bits (663), Expect = 1.790e-80
Identity = 151/347 (43.52%), Postives = 196/347 (56.48%), Query Frame = 1
Query:   10 FQKRFNAWYYRFPKRNRFSIRRKTSVGQKKPEGWEGKAWAFVQKLRAILREHAQDA------------------------------IFALLYNMNQTPIQAEMPSETTLEKTGAKSACITTGGEAEKLRYTVVLTVRKPGK-----------------------------NSISYEHLPEKRTSFDYPAGGISLGVQESSWCDGVQSDEWVTQDSMRRPGY-TLRDQRPSVLVLDDFRCHREEKFQQKLKDLANTLVVMLGGGLTPVCQPLDRNINKEFKRGFRARYTIWIRDNFG--RSGEKVSAPSRGLVATWVKEVWEGISERTIPSCFKVCGLTLNLDGSEDH 864
            F+ +FN+WY RF KRN FSIRR+TSVGQK P+G EG AWA V KLR  L + A +                               +F  L NM+QTP+Q E+P ETTLEKTGAK A I+TGG+ EK R+T+VL V   GK                             NS+++E  P  R    +PA G+S GVQE SW D  + + W++     RP   ++  QRP +LVLDDF+CH++E F   LK  ANT+V+ + G LTP+ QPLDR +NK+ KR  R +YT +        RSG K+  P RG+V+TW KE WE  +  T+ +CF +CGLTL LDGSEDH
Sbjct:   27 FKVKFNSWYQRFRKRNGFSIRRRTSVGQKLPKGDEGMAWATVMKLREALVKRAGEIYARRHPPAPDESPIKGEDLTSEQLASVEAEVFEELGNMDQTPVQHEIPVETTLEKTGAKDARISTGGK-EKERFTLVLAVMADGKKVSPRIIFKGTPFTPPTVSGKGKSTLPRKNSVAWEIHPANRAKHGHPANGMSFGVQEKSWSDQRECNGWISGSWKLRPNNGSIVQQRPCILVLDDFKCHKDEGFIAALKRDANTIVIFIPGRLTPLLQPLDRMLNKQMKRLLRRKYTAYSASAVADARSG-KLKPPERGVVSTWCKEAWESSTPETVKTCFMICGLTLALDGSEDH 371          
BLAST of mRNA_P-littoralis_Contig609.46.1 vs. uniprot
Match: A0A6H5JUK2_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUK2_9PHAE)

HSP 1 Score: 257 bits (656), Expect = 5.310e-80
Identity = 156/376 (41.49%), Postives = 201/376 (53.46%), Query Frame = 1
Query:   10 FQKRFNAWYYRFPKRNRFSIRRKTSVGQKKPEGWEGKAWAFVQKLRAIL---------REH---------------------AQDAIFALLYNMNQTPIQAEMPSETTLEKTGAKSACITTGGEAEKLRYTVVLTVRKPGK-----------------------------NSISYEHLPEKRTSFDYPAGGISLGVQESSWCDGVQSDEWVTQDSMRRPGY-TLRDQRPSVLVLDDFRCHREEKFQQKLKDLANTLVVMLGGGLTPVCQPLDRNINKEFKRGFRARYTIWIRDNFG--RSGEKVSAPSRGLVATWVKEVWEGISERTIPS-----------------------------CFKVCGLTLNLDGSEDH 864
            F+ + N+WY RF KRN FSIRR+TSVGQK P+G+EG AWA V KLR  L         R H                      +  +F  L NM+QTP+Q EMP ETTLEKTGAK A I+TGG+ EK R+T+VL V   GK                             NS+++E  P  R   D+PA G+S GVQE SW D  + + W++     RP   ++  QRP +LVLDDF+CH++E +   LK  ANT+V+++ GGLTP+ QPLDR +NK+ KR  R +YT +        RSG K+  P RG+V+TW KE WE I+  T+ S                             CFK+CGLTL LDGSEDH
Sbjct:   27 FKVKINSWYQRFRKRNGFSIRRRTSVGQKLPKGYEGMAWATVMKLREALVRRAGEIYARRHPPAPDESPIKGEDLTFEQLASVEAEVFKELGNMDQTPVQHEMPVETTLEKTGAKDARISTGGK-EKERFTLVLAVMADGKKVSPRIIFKGTPFIPPAVSGKGKSTLPRKNSVAWEIHPANRAKHDHPANGMSFGVQEKSWSDQRECNGWISGSWKLRPNNGSIVQQRPCILVLDDFKCHKDEGYIAALKRDANTIVIVIPGGLTPLLQPLDRMLNKQMKRLLRGKYTAYSASAVADARSG-KLKPPERGVVSTWCKEAWESITPETVSSVRKERFALGDVRAWSGENPACSVXETVKTCFKICGLTLALDGSEDH 400          
BLAST of mRNA_P-littoralis_Contig609.46.1 vs. uniprot
Match: A0A6H5JHT8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHT8_9PHAE)

HSP 1 Score: 261 bits (668), Expect = 5.030e-79
Identity = 149/347 (42.94%), Postives = 195/347 (56.20%), Query Frame = 1
Query:   10 FQKRFNAWYYRFPKRNRFSIRRKTSVGQKKPEGWEGKAWAFVQKLRAILREHAQDA------------------------------IFALLYNMNQTPIQAEMPSETTLEKTGAKSACITTGGEAEKLRYTVVLTVR-----------------------------KPGKNSISYEHLPEKRTSFDYPAGGISLGVQESSWCDGVQSDEWVTQDSMRRPGY-TLRDQRPSVLVLDDFRCHREEKFQQKLKDLANTLVVMLGGGLTPVCQPLDRNINKEFKRGFRARYTIWIRDNFG--RSGEKVSAPSRGLVATWVKEVWEGISERTIPSCFKVCGLTLNLDGSEDH 864
            F+ +FN+WY RF KRN FSIRR+TSVGQK P+G+EG AWA V KL   L + A +                               +F  + NM+Q P+Q EMP ETTL+KTGAK A I+TGG  EK R+T+VL V                              +P KN +++E  P  R    +PA G+S GVQE SW D  + + W++     RP   ++  QRP +LVLDDF+CH +E F   LK  ANT+V+ + GGLTP+ QPLDR +NK+ KR  R +YT +        RSG K+  P RG+V+TW KE WE I+  T+ +C K+CGLTL LDGSEDH
Sbjct:  221 FKFKFNSWYQRFRKRNGFSIRRRTSVGQKLPKGYEGMAWATVMKLCEALVKRAGEIYARRHPPAPDESPIKGEDLNSEQLASVEAEVFEEVGNMDQMPVQHEMPVETTLDKTGAKDARISTGGGNEKERFTLVLAVTADGKKVSPRIIFEGTPFIPPTVSGKGKSTRPRKNPVAWEMHPANRAKHGHPANGMSFGVQEKSWSDQRECNGWISGSWKLRPNNGSIVQQRPRILVLDDFKCHNDEGFIAALKRDANTIVIFIPGGLTPLLQPLDRMLNKQMKRLLRGKYTAYSPSAVADARSG-KLKPPERGVVSTWCKEAWESITPETVKTCSKICGLTLALDGSEDH 566          
BLAST of mRNA_P-littoralis_Contig609.46.1 vs. uniprot
Match: A0A6H5JTG5_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTG5_9PHAE)

HSP 1 Score: 257 bits (657), Expect = 5.040e-78
Identity = 151/355 (42.54%), Postives = 196/355 (55.21%), Query Frame = 1
Query:   10 FQKRFNAWYYRFPKRNRFSIRRKTSVGQKKPEGWEGKAWAFVQKLRAILREHAQDA------------------------------IFALLYNMNQTPIQAEMPSETTLEKTGAKSACITTGGEAEKLRYTVVLTVRKPGK-----------------------------NSISYEHLPEKRTSFDYPAGGISLGVQESSWCDGVQSDEWV--------TQDSMRRPGY-TLRDQRPSVLVLDDFRCHREEKFQQKLKDLANTLVVMLGGGLTPVCQPLDRNINKEFKRGFRARYTIWIRDNFG--RSGEKVSAPSRGLVATWVKEVWEGISERTIPSCFKVCGLTLNLDGSEDH 864
            F+ +FN+WY RF KRN FSIRR+ SVGQK P+G+EG AWA V KLR  L + A +                               +F  L NM+QTP+Q EMP ETTLE TG K A I+TGG+ EK R+T+VL V   GK                             NS+++E  P  R    +PA G+S GVQE SW    + + W+           SM RP   ++  QRP +LVLDDF+CH++E F   L   ANT+V+ + GGLTP+ QPLDR +NK+ KR  R +YT +        RSG K+  P RG+V+TW KE WE ++  T+ +CFK+CGLTL LDGSEDH
Sbjct:  181 FKVKFNSWYQRFRKRNGFSIRRRASVGQKLPKGYEGMAWATVTKLREALVKRAGEIYARRHPPAPDESPIKGEDLTSEQPASVEAEVFEELGNMDQTPVQHEMPVETTLEDTGGKDARISTGGK-EKERFTLVLAVMADGKMVSPCIIFKGTPFIPPTVSGKGKSTLPRKNSVAWEVHPANRAKHGHPANGMSFGVQEKSWSGQQECNGWIPGSWKLCPNNGSMXRPNNGSIVQQRPCILVLDDFKCHKDEGFIAALNRDANTIVIFIPGGLTPLLQPLDRMLNKQMKRLLRGKYTAYSAPAVADARSG-KLKPPERGVVSTWCKEAWEFVTSETVNTCFKICGLTLALDGSEDH 533          
BLAST of mRNA_P-littoralis_Contig609.46.1 vs. uniprot
Match: A0A6H5KE45_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KE45_9PHAE)

HSP 1 Score: 244 bits (624), Expect = 1.620e-73
Identity = 153/375 (40.80%), Postives = 193/375 (51.47%), Query Frame = 1
Query:   10 FQKRFNAWYYRFPKRNRFSIRRKTSVGQKKPEGWEGKAWAFVQKLRAILREHA------------------------------QDAIFALLYNMNQTPIQAEMPSETTLEKTGAKSACITTGGEA-------------------------EKLRYTVVLTVR-----------------------------KPGKNSISYEHLPEKRTSFDYPAGGISLGVQESSWCDGVQSDEWVTQDSMRRP--GYTLRDQRPSVLVLDDFRCHREEKFQQKLKDLANTLVVMLGGGLTPVCQPLDRNINKEFKRGFRARYTIWI----RDNFGRSGEKVSAPSRGLVATWVKEVWEGISERTIPSCFKVCGLTLNLDGSEDH 864
            F+ +F +WY RF KRN+FSIRR+TSVG + P+G EG AWA + KLR  L E A                               D +F  L NM+QTP+Q EMP ETTLEKTGAK A I TG                            EK R+T+ L V                              +P KNSI++E LP  R+    P GG+S GVQE SWCD  +   W+      RP  G  +R QR  +LVLDDF+CH+++ F   LK  ANT+V+ + GGLTP+ QPLDR +NK+ KR  R  YT       RD   ++G K++ P RG VATW K  W  I+  T+ +CFK+CGLTL LDGSEDH
Sbjct:  114 FKSKFKSWYQRFRKRNKFSIRRRTSVGIRLPKGHEGMAWATLMKLRKALLERAGEIYAQRYPPAPGESPIRGEDLSSSQLELVTDELFKDLGNMDQTPVQYEMPVETTLEKTGAKDARIATGAGVCCIRTILKPLPYPPTSCILPPPPGKEKERFTLCLAVSADGTKVPLRIIFKGTPFVPPATPGKGKATQPRKNSIAWEVLPANRSKHGLPVGGMSFGVQEKSWCDLREYKLWIKDSWKLRPNNGSVVR-QRRCILVLDDFKCHKDDGFIAALKREANTIVIFIPGGLTPLLQPLDRMLNKQMKRLLRGMYTAHTAKAARDP--KTG-KLAPPGRGAVATWCKNAWASITPETVKTCFKICGLTLALDGSEDH 484          
BLAST of mRNA_P-littoralis_Contig609.46.1 vs. uniprot
Match: A0A6H5JQM5_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQM5_9PHAE)

HSP 1 Score: 229 bits (584), Expect = 2.130e-67
Identity = 143/346 (41.33%), Postives = 187/346 (54.05%), Query Frame = 1
Query:   10 FQKRFNAWYYRFPKRNRFSIRRKTSVGQKKPEGWEGKAWAFVQKLRAILREHAQDA------------------------------IFALLYNMNQTPIQAEMPSETTLEKTGAKSACITTGGEAEKLRYTVVLTVR-----------------------------KPGKNSISYEHLPEKRTSFDYPAGGISLGVQESSWCDGVQSDEWVTQDSMRRPGY-TLRDQRPSVLVLDDFRCHREEKFQQKLKDLANTLVVMLGGGLTPVCQPLDRNINKEFKRGFRARYTIWIRDNFG--RSGEKVSAPSRGLVATWVKEVWEGISERTIPSCFKVCGLTLNLDGSED 861
            F+ +F  WY+RF +R+  SIRR+TSVGQK P G+EG A+A + KLR  L E A +                               +F  L NM+QTP+Q EMP ETTLEK GAK A I+TGG+ EK R+T+ L V                              +P K SI+ E LP  +T+F YP  G+S GVQE SW D  +   W+++    RP + ++  QR S+LVLDDFR               NT V+++ GGLTP+ QPLDR ++KE KR  R RYT ++       ++G K+  P RGLV+TW KE W  I+  T+  CFKVCGLTL LDGSED
Sbjct:  200 FRTKFKNWYHRFRERHGLSIRRRTSVGQKLPTGYEGLAFATLMKLRTALLERAGEIYARRNPPASGESPIKGKDLSPAQLESVATEVFEELGNMDQTPVQQEMPVETTLEKGGAKDARISTGGK-EKERFTLCLAVMADGGKVPLRIIFKGKPFIPPSTARRGKNTQPRKGSIAAEVLPANQTNFGYPVSGMSFGVQERSWYDACECTLWLSESWGFRPNHGSVIKQRHSILVLDDFRT--------------NTTVILIPGGLTPLLQPLDRMLDKEMKRLMRRRYTQYMASAIADPKTG-KLQPPGRGLVSTWCKESWAAITAETVKMCFKVCGLTLALDGSED 529          
BLAST of mRNA_P-littoralis_Contig609.46.1 vs. uniprot
Match: A0A6H5K8Y4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K8Y4_9PHAE)

HSP 1 Score: 236 bits (603), Expect = 2.380e-67
Identity = 145/339 (42.77%), Postives = 183/339 (53.98%), Query Frame = 1
Query:   19 RFNAWYYRFPKRNRFSIRRKTSVGQKKPEGWEGKAWAFVQKLRAILREHA------------------------------QDAIFALLYNMNQTPIQAEMPSETTLEKTGAKSACITTGGEAEKLRYTVVLTVR-----------------------------KPGKNSISYEHLPEKRTSFDYPAGGISLGVQESSWCDGVQSDEWVTQDSMRRP--GYTLRDQRPSVLVLDDFRCHREEKFQQKLKDLANTLVVMLGGGLTPVCQPLDRNINKEFKRGFRARYTIWI----RDNFGRSGEKVSAPSRGLVATWVKEVWEGISERTIPSCFKVCGLTL 840
            +F +WY RF KRN+FSIRR+TSVGQK P+G EG AWA + KLR  L E A                               D +F  L NM+QTP+Q EMP ETTLE TGAK A I TGG+ EK R+T+ L V                              +P KNSI++E LP  R+    P GG+S GVQE SWCD  +   W+      RP  G  +R QR  +LVLDDF+CH+++ F   LK  ANT+V+ + GGL P+ QPLDR +NK+ KR  R  YT       RD   ++G K+  P RG VATW K  W  I+   + +CFK+CGLTL
Sbjct:  184 KFKSWYQRFCKRNKFSIRRRTSVGQKLPKGHEGMAWATLMKLRKALLERAGEIYAQRYPPAPGESPIRGEDLSSSQLELVTDELFEELGNMDQTPVQHEMPVETTLENTGAKDARIATGGK-EKERFTLCLAVSADGKKVPLRIIFKGTPFVPPATPGKGKATQPRKNSIAWEVLPANRSKHGLPVGGMSFGVQEKSWCDLRECKLWIKDSWKLRPNNGSIVR-QRRCILVLDDFKCHKDDGFIAALKREANTIVIFIPGGLIPLFQPLDRMLNKQMKRLLRGMYTAHTAKAARDP--KTG-KLVPPGRGAVATWCKNAWASITPEIVKTCFKICGLTL 517          
BLAST of mRNA_P-littoralis_Contig609.46.1 vs. uniprot
Match: A0A6H5KVR1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KVR1_9PHAE)

HSP 1 Score: 229 bits (584), Expect = 4.250e-67
Identity = 137/327 (41.90%), Postives = 178/327 (54.43%), Query Frame = 1
Query:   10 FQKRFNAWYYRFPKRNRFSIRRKTSVGQKKPEGWEGKAWAFVQKLRAILREHA------------------------------QDAIFALLYNMNQTPIQAEMPSETTLEKTGAKSACITTGGEAEKLRYTVVLTVRKPGK--------NSISYEHLPEKRTSFDYPAGGISLGVQESSWCDGVQSDEWVTQDSMRRPGYTLRDQRPSVLVLDDFRCHREEKFQQKLKDLANTLVVMLGGGLTPVCQPLDRNINKEFKRGFRARYTIW----IRDNFGRSGEKVSAPSRGLVATWVKEVWEGISERTIPSCFKVCGLTLNLDGSEDH 864
            F+ +F +WY RF KRN+ SIRR+ SV QK P+G EG AW  + KLR  L E A                               D +F  L NM+QTP+Q EMP ETTLEKTG K A I TGG A   + T  ++   PGK        NSI++E LP  R+    P GG+S GVQE SWCD  +   W+      +  + LR    S+       CH+++ F   LK  A+T+V+ + GGLTP+ QPLDR +NK+  R  R  YT      +RD   ++G K++ P RG VATW K  W  I+  T+ +CFK+CGLTL LDGSEDH
Sbjct:  234 FKSKFKSWYQRFRKRNKLSIRRRISVDQKLPKGHEGMAWTTLMKLRKALLERAGEIYAQRYPPAPGESPIRGEDLSSSQLELVTDELFEELGNMDQTPVQHEMPVETTLEKTGVKDARIATGGPAAHFKGTPFVSPATPGKGKATQPRKNSIAWEVLPANRSKHGLPVGGMSFGVQEKSWCDLRECKLWI------KDSWELRPNNGSI-------CHKDDGFIAALKREASTIVIFIPGGLTPLLQPLDRMLNKQ--RLLRGMYTAHTAKAVRDP--KTG-KLAPPGRGAVATWCKNAWASITPETVKTCFKICGLTLALDGSEDH 542          
BLAST of mRNA_P-littoralis_Contig609.46.1 vs. uniprot
Match: A0A6H5KII4_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KII4_9PHAE)

HSP 1 Score: 221 bits (563), Expect = 6.840e-66
Identity = 117/259 (45.17%), Postives = 154/259 (59.46%), Query Frame = 1
Query:  178 IFALLYNMNQTPIQAEMPSETTLEKTGAKSACITTGGEAEKLRYTVVLTVRKPGK-----------------------------NSISYEHLPEKRTSFDYPAGGISLGVQESSWCDGVQSDEWVTQDSMRRPGY-TLRDQRPSVLVLDDFRCHREEKFQQKLKDLANTLVVMLGGGLTPVCQPLDRNINKEFKRGFRARYTIWIRDNFGRSGEKVSAPSRGLVATWVKEVWEGISERTIPSCFKVCGLTLNLDGSEDH 864
            +F  L NM+QTP+Q EMP ETTLEKTGAK A ++TGGE EK R+T+VL V   GK                             NS+++E  P  R    +PA G+S GVQE SW D  + + W +     RP   ++  QRP +LVLDDF+CH++E F   LK  ANT+V+ + GGLTP+ QPLDR +NK+ KR  R++YT +          K+  P RG+V+TW K  WE I+  T+ +CFK+CGLTL LDGSEDH
Sbjct:   47 VFEDLGNMDQTPVQHEMPVETTLEKTGAKDARVSTGGE-EKERFTLVLAVTADGKKVSLRIIFMGTPFIPPTVSGKGKSTLPRKNSVAWEMHPTNRAKHGHPANGMSFGVQEKSWSDQRECNGWTSGSWKLRPNNGSIVQQRPCILVLDDFKCHKDEGFIAALKRDANTIVIFIPGGLTPLLQPLDRMLNKQTKRLLRSKYTAYSASATDARSGKLKPPERGVVSTWCKGAWESITPETVKTCFKICGLTLALDGSEDH 304          
BLAST of mRNA_P-littoralis_Contig609.46.1 vs. uniprot
Match: A0A6H5KRZ8_9PHAE (DDE-1 domain-containing protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KRZ8_9PHAE)

HSP 1 Score: 226 bits (576), Expect = 1.090e-65
Identity = 148/360 (41.11%), Postives = 191/360 (53.06%), Query Frame = 1
Query:   10 FQKRFNAWYYRFPKRNRFSIRRKTSVGQKKPEGWEGKAWAFVQKLRAILREHAQDA------------------------------IFALLYNMNQTPIQAEMPSETTLEKTGAKSACITTGGEAEKLRYTVVLTVRKPGKN---------------SISYE---HLPEKRT------SFDYPAGGISLGVQ------------------ESSWCDGVQSDEWVTQDSMRRPGY-TLRDQRPSVLVLDDFRCHREEKFQQKLKDLANTLVVMLGGGLTPVCQPLDRNINKEFKRGFRARYTIWIRDNFG--RSGEKVSAPSRGLVATWVKEVWEGISERTIPSCFKVCGLTLNLDGSEDH 864
            F+ +FN+WY RF KRN FSIRR+TSVGQK P+G+EG AWA V KLR  L + A +                               +F  L NM+QTP+Q EMP ETTLEKTGAK A I+TGGE EK R+T+VL V   GK                ++S +    LP K +      S +    G   G Q                  E SW D  + + W+      RP   ++  QRP +LVLDDF+CH++E F   LK  A T V+ + GGLT + QPLDR +NK+ KR  R +YT          RSG K++ P  G+V+TW KE WE I+ +T+ +CFK+CGLTL LDGSE H
Sbjct:  209 FKVKFNSWYQRFRKRNGFSIRRRTSVGQKLPKGYEGMAWATVMKLREALVKRAGEIYARRHPPAPDESPIKGEDLTSEQLASVEAEVFEELGNMDQTPVQHEMPVETTLEKTGAKDARISTGGE-EKERFTLVLAVMADGKKVSPRIIFKGTPFIPPTVSGKVKSTLPRKNSVAWEIHSANXARSGCHGGRQNDVSPRIIFKGTPFIPPTEKSWSDQRECNGWIPGSWKLRPNNGSIVQQRPCILVLDDFKCHKDEGFIAALKRGAKT-VIFIPGGLTSLLQPLDRMLNKQMKRLLRGKYTACSASAVADARSG-KLNPPEHGVVSTWCKEAWESITSKTVETCFKICGLTLALDGSEHH 565          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig609.46.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5K6L9_9PHAE1.790e-8043.52DDE-1 domain-containing protein n=1 Tax=Ectocarpus... [more]
A0A6H5JUK2_9PHAE5.310e-8041.49DDE-1 domain-containing protein n=1 Tax=Ectocarpus... [more]
A0A6H5JHT8_9PHAE5.030e-7942.94Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JTG5_9PHAE5.040e-7842.54DDE-1 domain-containing protein n=1 Tax=Ectocarpus... [more]
A0A6H5KE45_9PHAE1.620e-7340.80DDE-1 domain-containing protein n=1 Tax=Ectocarpus... [more]
A0A6H5JQM5_9PHAE2.130e-6741.33DDE-1 domain-containing protein n=1 Tax=Ectocarpus... [more]
A0A6H5K8Y4_9PHAE2.380e-6742.77Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KVR1_9PHAE4.250e-6741.90Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KII4_9PHAE6.840e-6645.17DDE-1 domain-containing protein n=1 Tax=Ectocarpus... [more]
A0A6H5KRZ8_9PHAE1.090e-6541.11DDE-1 domain-containing protein n=3 Tax=Ectocarpus... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig609contigP-littoralis_Contig609:132126..133730 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog2880.D7FXD3
Preferred namePOGK
PFAMsBrkDBD,DDE_1,HTH_Tnp_Tc5,KRAB
Model size864
Max annot lvl2759|Eukaryota
KEGG koko:K09228
Hectar predicted targeting categoryother localisation
Exons4
Evalue3.83e-48
EggNOG OGsKOG3105@1|root,KOG3105@2759|Eukaryota
DescriptionDNA binding
Cds size864
COG categoryCH
BRITEko00000,ko03000
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791268.2941682-CDS-P-littoralis_Contig609:132125..1326591680791268.2941682-CDS-P-littoralis_Contig609:132125..132659Pylaiella littoralis U1_48CDSP-littoralis_Contig609 132126..132659 -
1680791268.3110578-CDS-P-littoralis_Contig609:132742..1327781680791268.3110578-CDS-P-littoralis_Contig609:132742..132778Pylaiella littoralis U1_48CDSP-littoralis_Contig609 132743..132778 -
1680791268.3253076-CDS-P-littoralis_Contig609:133331..1334481680791268.3253076-CDS-P-littoralis_Contig609:133331..133448Pylaiella littoralis U1_48CDSP-littoralis_Contig609 133332..133448 -
1680791268.3403637-CDS-P-littoralis_Contig609:133553..1337301680791268.3403637-CDS-P-littoralis_Contig609:133553..133730Pylaiella littoralis U1_48CDSP-littoralis_Contig609 133554..133730 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig609.46.1prot_P-littoralis_Contig609.46.1Pylaiella littoralis U1_48polypeptideP-littoralis_Contig609 132126..133730 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig609.46.1

>prot_P-littoralis_Contig609.46.1 ID=prot_P-littoralis_Contig609.46.1|Name=mRNA_P-littoralis_Contig609.46.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=288bp
MEQFQKRFNAWYYRFPKRNRFSIRRKTSVGQKKPEGWEGKAWAFVQKLRA
ILREHAQDAIFALLYNMNQTPIQAEMPSETTLEKTGAKSACITTGGEAEK
LRYTVVLTVRKPGKNSISYEHLPEKRTSFDYPAGGISLGVQESSWCDGVQ
SDEWVTQDSMRRPGYTLRDQRPSVLVLDDFRCHREEKFQQKLKDLANTLV
VMLGGGLTPVCQPLDRNINKEFKRGFRARYTIWIRDNFGRSGEKVSAPSR
GLVATWVKEVWEGISERTIPSCFKVCGLTLNLDGSEDH
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mRNA from alignment at P-littoralis_Contig609:132126..133730-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig609.46.1 ID=mRNA_P-littoralis_Contig609.46.1|Name=mRNA_P-littoralis_Contig609.46.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=1605bp|location=Sequence derived from alignment at P-littoralis_Contig609:132126..133730- (Pylaiella littoralis U1_48)
ATGGAACAATTTCAGAAGCGTTTCAACGCCTGGTACTACAGGTTCCCCAA GAGGAACCGGTTCTCGATCCGACGCAAGACGAGCGTGGGGCAGAAGAAGC CGGAGGGATGGGAGGGCAAGGCGTGGGCATTCGTCCAGAAGCTCCGGGCA ATCCTGCGTGAGCACGCGCAGGACGCCGTCATCTTGGAGAGGGCAGCCCA GGCAGCGAAGGTCGGAGGGACCATGGAGATCGAGATGGACACCAAGGCGA CCGCGGAGGAACTCCTGGCTGTTCAGGCCAAGATCTTCGCCCTGCTGTAC AACATGAACCAGACACCTATCCAGGCCGAGATGCCGTCGGAAACCACGCT GGAGAAGACTGGTGCGAAGAGCGCTTGCATCACGACGGGAGGTGAGGCGG TATGATGGTACAGTGCATTGTTTAAATTAGTTCCAACCCAACACGGTGCG GAGATTTTATGCACGCGCAACAAAAGCGGGAAATTACAAAATTGCGGACA GCGGAAATACGGGAAAATATAATATTTTTGAATATTTCGCATTGCTTCTG CCGTCACGTGCACATGCTTCTTTTGCCTGCAAGGTACTGCTGTCACCGCC CCACTTCACGTTTGTTGTATTTATCAGCGATTTAATGATTCATTTAGTTG TATGTATATATTACGCTGTATTCCTGTTCGCTGTTGGCAGGTACCTGGTA AGTTTTGTACTCCAGGAGAAGGTGTGTTTTTTTATTGATTAAATTTATAA AGAAAAGCAGGGAACTCATTTTATTACCTATGTTATCGTTTACCTCGGTA AATACGGTAGTTTACCTACGGTAGTGGCAGGCAATAATGTTTTGCAGCCA ATATAAATCAAATGGTATTATTGTTGTTATTTCCCTAAGTTGTTTTGTTA TTCACGCGGAGTATGTTCTTCTGATACACACCGATTTCCGCACCCAGGCC AGGAGAAGCTGCGGTACACCGTGGTGCTAACTGTCCGGGTGATGGACAGA AGGTGCGGCCGCGCATCATCTACAAGGGGAGCCCTTTCGTCGGGGGTACC AAGAAGTCGGGCGCGCCCAAGAAGCCTGGCAAGAACAGCATCTCGTATGA GCACCTCCCAGAGAAGCGGACGAGCTTCGACTACCCGGCGGGCGGCATCA GCCTCGGGGTGCAGGAGTCGTCGTGGTGCGACGGCGTTCAGTCCGACGAA TGGGTCACTCAGGACTCCATGCGCCGCCCAGGGTATACCCTCAGGGATCA GCGTCCCAGCGTTCTCGTGCTCGACGACTTCAGGTGCCACCGGGAAGAGA AGTTCCAGCAGAAGCTCAAGGATCTGGCGAACACGCTGGTGGTGATGCTT GGTGGAGGGCTGACCCCGGTGTGCCAGCCGCTCGACCGGAACATCAACAA GGAGTTCAAGCGAGGCTTTCGGGCCAGGTACACCATCTGGATCCGGGACA ACTTCGGGCGCTCGGGGGAGAAGGTCTCCGCGCCGAGCAGGGGGCTGGTC GCGACGTGGGTGAAGGAGGTGTGGGAAGGCATCTCGGAGCGGACCATTCC CTCGTGCTTCAAGGTCTGCGGTCTCACCCTCAACCTCGACGGCAGCGAGG ATCAC
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Coding sequence (CDS) from alignment at P-littoralis_Contig609:132126..133730-

>mRNA_P-littoralis_Contig609.46.1 ID=mRNA_P-littoralis_Contig609.46.1|Name=mRNA_P-littoralis_Contig609.46.1|organism=Pylaiella littoralis U1_48|type=CDS|length=864bp|location=Sequence derived from alignment at P-littoralis_Contig609:132126..133730- (Pylaiella littoralis U1_48)
ATGGAACAATTTCAGAAGCGTTTCAACGCCTGGTACTACAGGTTCCCCAA
GAGGAACCGGTTCTCGATCCGACGCAAGACGAGCGTGGGGCAGAAGAAGC
CGGAGGGATGGGAGGGCAAGGCGTGGGCATTCGTCCAGAAGCTCCGGGCA
ATCCTGCGTGAGCACGCGCAGGACGCCATCTTCGCCCTGCTGTACAACAT
GAACCAGACACCTATCCAGGCCGAGATGCCGTCGGAAACCACGCTGGAGA
AGACTGGTGCGAAGAGCGCTTGCATCACGACGGGAGGTGAGGCGGAGAAG
CTGCGGTACACCGTGGTGCTAACTGTCCGGAAGCCTGGCAAGAACAGCAT
CTCGTATGAGCACCTCCCAGAGAAGCGGACGAGCTTCGACTACCCGGCGG
GCGGCATCAGCCTCGGGGTGCAGGAGTCGTCGTGGTGCGACGGCGTTCAG
TCCGACGAATGGGTCACTCAGGACTCCATGCGCCGCCCAGGGTATACCCT
CAGGGATCAGCGTCCCAGCGTTCTCGTGCTCGACGACTTCAGGTGCCACC
GGGAAGAGAAGTTCCAGCAGAAGCTCAAGGATCTGGCGAACACGCTGGTG
GTGATGCTTGGTGGAGGGCTGACCCCGGTGTGCCAGCCGCTCGACCGGAA
CATCAACAAGGAGTTCAAGCGAGGCTTTCGGGCCAGGTACACCATCTGGA
TCCGGGACAACTTCGGGCGCTCGGGGGAGAAGGTCTCCGCGCCGAGCAGG
GGGCTGGTCGCGACGTGGGTGAAGGAGGTGTGGGAAGGCATCTCGGAGCG
GACCATTCCCTCGTGCTTCAAGGTCTGCGGTCTCACCCTCAACCTCGACG
GCAGCGAGGATCAC
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