mRNA_P-littoralis_Contig608.20.1 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig608.20.1
Unique NamemRNA_P-littoralis_Contig608.20.1
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
BLAST of mRNA_P-littoralis_Contig608.20.1 vs. uniprot
Match: A0A6H5JAU4_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JAU4_9PHAE)

HSP 1 Score: 309 bits (791), Expect = 4.400e-100
Identity = 152/256 (59.38%), Postives = 187/256 (73.05%), Query Frame = 1
Query:    1 VLASLHIFGRGNFFEDMTQMSHISEPTIQSTFHMF-KLFAQEFYHDHVHLPTAGEDQDQVMRHYDLLGFTGAIGSTDVTHIKWAACPYSWAKHYTGKEGFATIAFQAIVDHTGRLLAATKGFGSSMNDKTIITYDAAITKIREDPVYKEKEYTLFDKHGEPFQRKGNYSIVDNGYNKWEILIPPSSKFAGADIEIRWSKALESVRKDVECFFGILKGRFRILKLGILFQSLEDINNIFFTCCTLHNMLQAFDGLDE 765
            VLA L I  RGN F D+  MS IS  T  +TFH F + FA+E Y +H+ LPT G+ Q +VM  YD LGF+GA GSTDVTHI W  CPY+ A+ YTGKEG+ T+A+Q  VDHT R+LA T GF  S NDK+II YD A+TKIREDP+Y EKE+T+++  G P+Q KG Y +VDNGY+KW  LIPPS K+     ++ +SK LESVRKDVECFFGI+KGRFRILKL I +   EDI+N+FFTCC LHNML ++D   E
Sbjct:  159 VLACLQILARGNCFADIYHMSFISMQTAAATFHRFTRYFAREMYAEHIFLPT-GDYQKKVMTQYDRLGFSGATGSTDVTHIPWGMCPYNQARSYTGKEGYPTVAYQVTVDHTKRVLAVTPGFTGSTNDKSIIRYDTAVTKIREDPIYSEKEFTVYEADGTPYQLKGCYLLVDNGYHKWVTLIPPS-KYPIDQNDLAFSKRLESVRKDVECFFGIVKGRFRILKLSIPYHKQEDIDNVFFTCCILHNMLHSYDNKSE 412          
BLAST of mRNA_P-littoralis_Contig608.20.1 vs. uniprot
Match: A0A6H5KY50_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KY50_9PHAE)

HSP 1 Score: 295 bits (756), Expect = 8.680e-96
Identity = 150/253 (59.29%), Postives = 182/253 (71.94%), Query Frame = 1
Query:    1 VLASLHIFGRGNFFEDMTQMSHISEPTIQSTFHMF-KLFAQEFYHDHVHLPTAGEDQDQVMRHYDLLGFTGAIGSTDVTHIKWAACPYSWAKHYTGKEGFATIAFQAIVDHTGRLLAATKGFGSSMNDKTIITYDAAITKIREDPVYKEKEYTLFDKHGEPFQRKGNYSIVDNGYNKWEILIPPSSKFAGADIEIRWSKALESVRKDVECFFGILKGRFRILKLGILFQSLEDINNIFFTCCTLHNMLQAFDG 756
            VLA L I  RGN F D+  MS IS  T+ STFH F K FA E Y ++V+LPT GED  +VM  YD +GF GA+GSTDVTHI W  CPY+ A+ YTGKEG  T+AFQ  VDH+GR+LA T+GF  + NDKTII YD A+T+IR DPVY E++Y L+ + G+ F+ KG Y +VDNGY+KW  LIPPS K      ++ +SK LES RKDVEC+FGILKGRFRI KL I F   E I+N+FFTCC LHNML +FD 
Sbjct:   84 VLACLQILSRGNVFADIYHMSFISFQTVASTFHRFCKYFAAELYDEYVYLPT-GEDLRKVMEQYDRIGFPGAVGSTDVTHIYWGMCPYNQARIYTGKEGKPTVAFQVTVDHSGRVLAVTRGFTGATNDKTIIRYDKAVTRIRTDPVYTEQKYKLYAQDGQQFEEKGCYLLVDNGYHKWRTLIPPS-KCPIDRGDLIFSKRLESARKDVECYFGILKGRFRINKLAIGFHKQEYIDNVFFTCCILHNMLHSFDN 334          
BLAST of mRNA_P-littoralis_Contig608.20.1 vs. uniprot
Match: A0A6H5JPH7_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPH7_9PHAE)

HSP 1 Score: 295 bits (756), Expect = 1.260e-94
Identity = 150/253 (59.29%), Postives = 182/253 (71.94%), Query Frame = 1
Query:    1 VLASLHIFGRGNFFEDMTQMSHISEPTIQSTFHMF-KLFAQEFYHDHVHLPTAGEDQDQVMRHYDLLGFTGAIGSTDVTHIKWAACPYSWAKHYTGKEGFATIAFQAIVDHTGRLLAATKGFGSSMNDKTIITYDAAITKIREDPVYKEKEYTLFDKHGEPFQRKGNYSIVDNGYNKWEILIPPSSKFAGADIEIRWSKALESVRKDVECFFGILKGRFRILKLGILFQSLEDINNIFFTCCTLHNMLQAFDG 756
            VLA L I  RGN F D+  MS IS  T+ STFH F K FA E Y ++V+LPT GED  +VM  YD +GF GA+GSTDVTHI W  CPY+ A+ YTGKEG  T+AFQ  VDH+GR+LA T+GF  + NDKTII YD A+T+IR DPVY E++Y L+ + G+ F+ KG Y +VDNGY+KW  LIPPS K      ++ +SK LES RKDVEC+FGILKGRFRI KL I F   E I+N+FFTCC LHNML +FD 
Sbjct:  175 VLACLQILSRGNVFADIYHMSFISFQTVASTFHRFCKYFAAELYDEYVYLPT-GEDLRKVMEQYDRIGFPGAVGSTDVTHIYWGMCPYNQARIYTGKEGKPTVAFQVTVDHSGRVLAVTRGFTGATNDKTIIRYDKAVTRIRTDPVYTEQKYKLYAQDGQQFEEKGCYLLVDNGYHKWRTLIPPS-KCPIDRGDLIFSKRLESARKDVECYFGILKGRFRINKLAIGFHKQEYIDNVFFTCCILHNMLHSFDN 425          
BLAST of mRNA_P-littoralis_Contig608.20.1 vs. uniprot
Match: A0A6H5JHI0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHI0_9PHAE)

HSP 1 Score: 273 bits (699), Expect = 2.160e-87
Identity = 134/257 (52.14%), Postives = 181/257 (70.43%), Query Frame = 1
Query:    1 VLASLHIFGRGNFFEDMTQMSHISEPTIQSTFHMF-KLFAQEFYHDHVHLPTAGEDQ-DQVMRHYDLLGFTGAIGSTDVTHIKWAACPYSWAKHYTGKEGFATIAFQAIVDHTGRLLAATKGFGSSMNDKTIITYDAAITKIREDPVYKEKEYTLFDKHGEPFQRKGNYSIVDNGYNKWEILIPPSSKFAGADIEIRWSKALESVRKDVECFFGILKGRFRILKLGILFQSLEDINNIFFTCCTLHNMLQAFDGLDE 765
            VLA L I GRGN F  + Q+S +S  T+Q+ FH F K FA+E Y +H++LP+    + D VM+ YD LGF+GA+GS DVTHI W+ CPY+ A+ YTGKEG  T+ +Q  V+H GR +A T+GF  S NDKT + +DA + KIR D  Y EK + ++++ G     KG Y +VDNGY+KW+IL+ P+ K+  ++ +I +SK LESVRKDVECFFGILKG FRI K+ + +   E I+N+FFTCC LHNML  FDG+D+
Sbjct:   99 VLAWLTILGRGNCFASIYQVSWMSAKTVQTMFHKFCKHFAREMYDEHIYLPSEQNGELDHVMKQYDRLGFSGAMGSMDVTHIGWSKCPYNLARSYTGKEGVPTVGYQVTVNHAGRAIAVTEGFTDSTNDKTTVCWDAVVEKIRTDNQYTEKTFDVYNEDGTTTTLKGCYLLVDNGYHKWKILMEPT-KYPLSENDILFSKRLESVRKDVECFFGILKGCFRIQKVAMAYHEQERIDNVFFTCCILHNMLHTFDGMDQ 354          
BLAST of mRNA_P-littoralis_Contig608.20.1 vs. uniprot
Match: A0A6H5KNX4_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNX4_9PHAE)

HSP 1 Score: 274 bits (700), Expect = 6.270e-87
Identity = 145/285 (50.88%), Postives = 184/285 (64.56%), Query Frame = 1
Query:    1 VLASLHIFGRGNFFEDMTQMSHISEPTIQSTFHMF-KLFAQEFYHDHVHLPTAGEDQ-DQVMRHYDLLGFTGAIGSTDVTHIKWAACPYSWAKHYTGKEGFATIAFQAIVDHTGRLLAATKGFGSSMNDKTIITYDAAITKIREDPVYK----------------------------EKEYTLFDKHGEPFQRKGNYSIVDNGYNKWEILIPPSSKFAGADIEIRWSKALESVRKDVECFFGILKGRFRILKLGILFQSLEDINNIFFTCCTLHNMLQAFDGLDE 765
            VLA L I GRGN F  + QMS +S  T+Q  FH F + FA+E Y + +HLPT    + D VM+ YD LGFTGA+GS DVTHI W+ CPY+ A+ YTGKEGF TIA+Q  VDH GR +A T+GF  S NDKTI+ +D A+ KI  D  Y                             EK + ++++ G     KG Y +VDNGY+KW+ILI PS K+  ++ ++ +SK LESVRKDVECFFGILKGRFRILKL + +QS E I+N+FFTC  LHNML  FDG+D+
Sbjct:   86 VLAWLTILGRGNCFASIYQMSWMSAKTVQGMFHKFCRHFAREMYDEQIHLPTEESGKLDHVMKQYDRLGFTGAVGSMDVTHIAWSRCPYNQARSYTGKEGFPTIAYQVTVDHAGRAIAVTEGFTGSTNDKTIVCWDTAVEKIWTDKHYTXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKTFDVYNEDGTTTTLKGCYLLVDNGYHKWQILIEPS-KYPLSENDLLFSKRLESVRKDVECFFGILKGRFRILKLAMEYQSQERIDNVFFTCYILHNMLHTFDGMDQ 369          
BLAST of mRNA_P-littoralis_Contig608.20.1 vs. uniprot
Match: A0A6H5JBE2_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBE2_9PHAE)

HSP 1 Score: 268 bits (685), Expect = 1.830e-84
Identity = 136/255 (53.33%), Postives = 174/255 (68.24%), Query Frame = 1
Query:    1 VLASLHIFGRGNFFEDMTQMSHISEPTIQSTFHMF-KLFAQEFYHDHVHLPTAGEDQ-DQVMRHYDLLGFTGAIGSTDVTHIKWAACPYSWAKHYTGKEGFATIAFQAIVDHTGRLLAATKGFGSSMNDKTIITYDAAITKIREDPVYKEKEYTLFDKHGEPFQRKGNYSIVDNGYNKWEILIPPSSKFAGADIEIRWSKALESVRKDVECFFGILKGRFRILKLGILFQSLEDINNIFFTCCTLHNMLQAFDGL 759
            VLA L I GRGN F  +  +S +S PT+Q  FH F + FA E Y +H+ LP+    + D+VM  Y+ LGF GA+GSTDVTHI W+ CPY+  + YTGKEG  T+ +Q  V+H GR+LA T+GF  S NDKTII  D A+ +IR D  Y EK +T+  K G     KG Y IVDNGY+KW +LI PS K+  ++ ++ +SK LESVRKDVECFFGILK RFRILKL + +Q  E ++ +FFTCC LHNML   DG+
Sbjct:  128 VLACLTILGRGNVFGSIYNLSWMSTPTVQKVFHQFCEHFATEMYDEHIFLPSEENGELDRVMGQYEKLGFPGAMGSTDVTHIGWSRCPYNQGRSYTGKEGKPTVGYQVTVNHAGRVLAVTEGFTGSTNDKTIICCDEAVDRIRTDKQYAEKPFTVHKKDGTTETLKGCYLIVDNGYHKWRMLIEPS-KYPLSEADLLFSKRLESVRKDVECFFGILKMRFRILKLAMTYQKQERLDYVFFTCCILHNMLHTHDGM 381          
BLAST of mRNA_P-littoralis_Contig608.20.1 vs. uniprot
Match: D7FSK2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FSK2_ECTSI)

HSP 1 Score: 258 bits (658), Expect = 1.580e-82
Identity = 123/214 (57.48%), Postives = 156/214 (72.90%), Query Frame = 1
Query:  127 YHDHVHLPTAGEDQ-DQVMRHYDLLGFTGAIGSTDVTHIKWAACPYSWAKHYTGKEGFATIAFQAIVDHTGRLLAATKGFGSSMNDKTIITYDAAITKIREDPVYKEKEYTLFDKHGEPFQRKGNYSIVDNGYNKWEILIPPSSKFAGADIEIRWSKALESVRKDVECFFGILKGRFRILKLGILFQSLEDINNIFFTCCTLHNMLQAFDGLDE 765
            Y +H+HLPT    + D V+  YD LGFTGA+GS DVTHI W+ CPY+ A+ YTGKEGF TI +Q  VDH GR +A T+GF  S NDKT + +DAA+ KIR D  Y EK + ++++ G     KG Y +VDNGY+KW+ILI PS K+  ++ ++ +SK LESVRKDVECFFGILKGR RIL L + FQS E I+N+FFTCC LHNML  FDG+D+
Sbjct:    2 YDEHIHLPTEESGKLDLVIEQYDRLGFTGAMGSMDVTHIAWSRCPYNQARSYTGKEGFPTIGYQVTVDHAGRAIAVTEGFTGSTNDKTTVCWDAAVEKIRTDKQYTEKTFDVYNQDGTTTTLKGCYVLVDNGYHKWQILIEPS-KYPLSENDLLFSKRLESVRKDVECFFGILKGRLRILMLAMAFQSQERIDNVFFTCCILHNMLHTFDGMDQ 214          
BLAST of mRNA_P-littoralis_Contig608.20.1 vs. uniprot
Match: A0A6H5JUX7_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUX7_9PHAE)

HSP 1 Score: 253 bits (645), Expect = 4.680e-80
Identity = 132/257 (51.36%), Postives = 170/257 (66.15%), Query Frame = 1
Query:    1 VLASLHIFGRGNFFEDMTQMSHISEPTIQSTFHMF-KLFAQEFYHDHVHLPTAGEDQ-DQVMRHYDLLGFTGAIGSTDVTHIKWAACPYSWAKHYTGKEGFATIAFQAIVDHTGRLLAATKGFGSSMNDKTIITYDAAITKIREDPVYKEKEYTLFDKHGEPFQRKGNYSIVDNGYNKWEILIPPSSKFAGADIEIRWSKALESVRKDVECFFGILKGRFRILKLGILFQSLEDINNIFFTCCTLHNMLQAFDGLDE 765
            VLA L I G+GN F  + QMS +S  T+Q  FH F +LFA+E Y +H+HLP     +   VM+ YD LG                 CPY+ A+ YTGK+ F TIA+Q  VDH  R +A T+GF  S NDKTI+ +DAA+ KIR D  Y EK + L+++ G     KG Y + DNGY+KW+ILI PS K+  ++ ++ +SK LESVRKDVECFFGILKGRFRILKL + +QS E I+N+FFTCC LHNML  FDG+D+
Sbjct:   21 VLAWLTILGKGNCFASIFQMSWMSAKTVQGVFHKFCRLFAREMYDEHIHLPAEESGKLHHVMKQYDRLG-----------------CPYNQARSYTGKDWFPTIAYQVTVDHASRAIAVTEGFTGSTNDKTIVCWDAAVDKIRTDKQYTEKTFDLYNEDGTTTTLKGCYFLDDNGYHKWQILIEPS-KYPLSEDDLLFSKRLESVRKDVECFFGILKGRFRILKLAMAYQSQERIDNVFFTCCILHNMLHTFDGMDQ 259          
BLAST of mRNA_P-littoralis_Contig608.20.1 vs. uniprot
Match: A0A6H5KZ66_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZ66_9PHAE)

HSP 1 Score: 234 bits (596), Expect = 5.080e-74
Identity = 116/171 (67.84%), Postives = 131/171 (76.61%), Query Frame = 1
Query:  253 CPYSWAKHYTGKEGFATIAFQAIVDHTGRLLAATKGFGSSMNDKTIITYDAAITKIREDPVYKEKEYTLFDKHGEPFQRKGNYSIVDNGYNKWEILIPPSSKFAGADIEIRWSKALESVRKDVECFFGILKGRFRILKLGILFQSLEDINNIFFTCCTLHNMLQAFDGLDE 765
            CPYS A+ YTGKEGF +IA+QAIVDHTGR+LA TKGF  +MNDKTII YD A+  IR DPVY EK  TLFD++G PF+RKGNYSIVDNGYNK              D+E +WSKA ESVRKDVECF GIL GRF+ILKLGI FQ    I+N+F TCCTLHNML AFDGL+E
Sbjct:   21 CPYSRARQYTGKEGFPSIAYQAIVDHTGRVLAVTKGFPGAMNDKTIIRYDTAVAMIRRDPVYTEKVNTLFDENGRPFERKGNYSIVDNGYNK-------------TDMESKWSKAQESVRKDVECF-GILMGRFKILKLGIFFQDKNVIDNLFVTCCTLHNMLHAFDGLEE 177          
BLAST of mRNA_P-littoralis_Contig608.20.1 vs. uniprot
Match: A0A6H5K796_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K796_9PHAE)

HSP 1 Score: 236 bits (601), Expect = 6.670e-73
Identity = 124/249 (49.80%), Postives = 162/249 (65.06%), Query Frame = 1
Query:   19 IFGRGNFFEDMTQMSHISEPTIQSTFHMF-KLFAQEFYHDHVHLPTAGEDQDQVMRHYDLLGFTGAIGSTDVTHIKWAACPYSWAKHYTGKEGFATIAFQAIVDHTGRLLAATKGFGSSMNDKTIITYDAAITKIREDPVYKEKEYTLFDKHGEPFQRKGNYSIVDNGYNKWEILIPPSSKFAGADIEIRWSKALESVRKDVECFFGILKGRFRILKLGILFQSLEDINNIFFTCCTLHNMLQAFDGLD 762
            + G+GN F+D+ Q+S +S+   Q TFH F + FA E + +H++LPT G   D+VM  +  LG+TGA GSTDVTHI W  CP++  + +TGKEGF TIA+   VDH GR LA T GF  + NDKTII YD+ + KIR    Y E+EY L   +G    R+G + IVDNGY++W  LI PS K+   + +  +S+ LESVRKDV CF        RILKL + +   E ++NIFFTCC LHNML  FDGLD
Sbjct:   43 VLGKGNCFDDVEQLSKMSKSMAQPTFHKFCRHFAAEMFDEHIYLPT-GTYLDEVMGIFHQLGWTGACGSTDVTHIGWNMCPFTLGRSFTGKEGFPTIAYDVTVDHDGRDLAVTNGFTGATNDKTIIRYDSGVNKIRTASQYTEREYKLRKANGTKRMRRGCFLIVDNGYHEWVTLIAPS-KYPQRNEDTAFSRDLESVRKDVGCF--------RILKLRMPYHKREYVDNIFFTCCILHNMLHTFDGLD 281          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig608.20.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JAU4_9PHAE4.400e-10059.38Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KY50_9PHAE8.680e-9659.29Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JPH7_9PHAE1.260e-9459.29Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JHI0_9PHAE2.160e-8752.14Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KNX4_9PHAE6.270e-8750.88DDE Tnp4 domain-containing protein n=1 Tax=Ectocar... [more]
A0A6H5JBE2_9PHAE1.830e-8453.33Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
D7FSK2_ECTSI1.580e-8257.48Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JUX7_9PHAE4.680e-8051.36DDE Tnp4 domain-containing protein n=1 Tax=Ectocar... [more]
A0A6H5KZ66_9PHAE5.080e-7467.84DDE Tnp4 domain-containing protein n=1 Tax=Ectocar... [more]
A0A6H5K796_9PHAE6.670e-7349.80Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig608contigP-littoralis_Contig608:150124..152325 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog2880.D7FSK2
PFAMsPlant_tran
Model size765
Max annot lvl2759|Eukaryota
Hectar predicted targeting categoryother localisation
Exons3
Evalue2.59e-83
EggNOG OGs2E2RF@1|root,2S9YA@2759|Eukaryota
DescriptionPlant transposon protein
Cds size765
COG categoryS
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791266.155-CDS-P-littoralis_Contig608:150123..1502971680791266.155-CDS-P-littoralis_Contig608:150123..150297Pylaiella littoralis U1_48CDSP-littoralis_Contig608 150124..150297 +
1680791266.1678958-CDS-P-littoralis_Contig608:151038..1513921680791266.1678958-CDS-P-littoralis_Contig608:151038..151392Pylaiella littoralis U1_48CDSP-littoralis_Contig608 151039..151392 +
1680791266.1827052-CDS-P-littoralis_Contig608:152088..1523251680791266.1827052-CDS-P-littoralis_Contig608:152088..152325Pylaiella littoralis U1_48CDSP-littoralis_Contig608 152089..152325 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig608.20.1prot_P-littoralis_Contig608.20.1Pylaiella littoralis U1_48polypeptideP-littoralis_Contig608 150124..152325 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig608.20.1

>prot_P-littoralis_Contig608.20.1 ID=prot_P-littoralis_Contig608.20.1|Name=mRNA_P-littoralis_Contig608.20.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=255bp
VLASLHIFGRGNFFEDMTQMSHISEPTIQSTFHMFKLFAQEFYHDHVHLP
TAGEDQDQVMRHYDLLGFTGAIGSTDVTHIKWAACPYSWAKHYTGKEGFA
TIAFQAIVDHTGRLLAATKGFGSSMNDKTIITYDAAITKIREDPVYKEKE
YTLFDKHGEPFQRKGNYSIVDNGYNKWEILIPPSSKFAGADIEIRWSKAL
ESVRKDVECFFGILKGRFRILKLGILFQSLEDINNIFFTCCTLHNMLQAF
DGLDE
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mRNA from alignment at P-littoralis_Contig608:150124..152325+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig608.20.1 ID=mRNA_P-littoralis_Contig608.20.1|Name=mRNA_P-littoralis_Contig608.20.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=2202bp|location=Sequence derived from alignment at P-littoralis_Contig608:150124..152325+ (Pylaiella littoralis U1_48)
GTCCTGGCATCGCTGCACATATTTGGGAGGGGCAACTTCTTCGAGGATAT GACCCAGATGTCTCACATTAGCGAGCCGACGATACAAAGCACCTTTCACA TGTTCAAGCTTTTCGCGCAAGAGTTCTACCACGACCACGTGCATCTGCCC ACCGCCGGCGAGGACCAAGACCAGGTGACTGGTCTCATCGTACAAGTATT GTGAACCCATGTTTTTGTCCCGACACACGTATCGTAGACCTTTTTATAAT GCAAAGTATGTAGTTTACAAACTTCCGTGCAATGTTGTGAAGTGGCGCAT CTTGTCTTATTTTCTCGCCGTTAAAATGAGGTAAATCTACCTACTTCAAC CTCAGTGCCTCCTCATGATGGATTGCGTTCTATCTCCGACCGCCAAGGCA TCGTTGTCCGTTTGCGTTTTGGTCGGACCACGCACGGGAAGTCGATACCG GATTAAGCTGGCAGGGTGCTCGTATCCGCGATGTGTCGCTTGTAGTCTGC CAAAAAGAACAACGATCAATACCTTCATTCGAGTCAACATTATCCACTGC CTCAAGTTAAGCACGTGCATTGCGGTCTTGGTAGCGCATTGGTCTGAGTA AACAACAACGCACCAAACAAAAAGCGGAACGGCATCTATGTTCAGTTAAG TTAGGCACGTTGTAGCTCCCGGGTGTTGTGTGTGTTTGAAGTGCTGGATA TGACATTGCTTCTACATCGTGTACCAGGTATGTAGGTTGGTTTGTAGCCT CGACGCTCTGTCCTTTGGACGCATGAACCCCAAGCCTTTGCACGCCGTAC TTCTTCCAGCACAGCGGTGGGCAGGCATAGTCAATCAACGGCGTGTTCTC GATATTCGAAAACGCCCGACGTCATATCTCACGGTGCGACCCCACTGTTT CTTGCCAAATATCAGGTGATGAGGCATTACGACCTACTGGGATTTACTGG AGCAATCGGTTCGACTGATGTCACCCACATCAAATGGGCGGCTTGCCCGT ATTCTTGGGCGAAGCACTACACGGGAAAGGAAGGTTTCGCGACCATCGCC TTCCAGGCGATCGTGGATCACACTGGGCGTCTCCTGGCCGCGACAAAGGG CTTTGGTAGCTCGATGAACGACAAGACCATCATCACGTACGACGCGGCCA TCACTAAAATCCGCGAAGACCCGGTCTACAAGGAGAAGGAGTACACTCTC TTCGACAAGCATGGTGAGCCGTTCCAGCGAAAGGGCAACTACAGCATCGT CGACAATGGGTACAACAAGGTGAGATTGCTCTGCGGCTCGGTTTCTCGAG GTGTAGCCCGTGTGTTGGTGCCTCGTAGCTCTCCTATGGATGGGCTTCAA CGCTGTGCTTGTACGTCATGATGGAGAATTAAGACGAAACTAGCGTTTGT CTTGCTCGTACGTGGAGAGTCTGTATTCTCCTAGCAAGAACCGTTGACAA AAAGCTAGTAACCGATCGCCCTTGTCTGGTGAATATCTTTGTGGGTGGAC TTGTTGCACCAAGGTTTCCAAAATGGTCAAAATGACGAGGCGCTCACGCC CCCCCCCCCCCCCTCCGAATCTGAACGAACTCGAAGTAGTTTTACCCCGA ATGTGTCGGGCGACCAGACAATAACCAAATTTATACCACCGCACTGTCTG AATGGGGTGTTGGCGGGGCTCGATCTGTACGAATGCATCCGCCAAACAAC ATCGCACATGCTGTCCCGCGGGTTTGCTGTATGTCATGTTTTTCATGGTG TATTTCCGAACAACTGCTGCCCGCTGTTGTCCGCTGTTGAGTGTCCACTG TGAAGCGCACTCGGACGTCCAAGGAGCGTGTGAAGTGTTCAGCGTCCCGC TGATTAGAACGCGTTTTTCACACCGAAGCTCGAAGGTTGCCCCCTCCTCA TCCCACGTGCTGTCTGCCTTTTGTTTCCGTCCGTCTGTCACGCCTCGCCT CCCTTCCTACATAAGTGGGAGATCCTCATCCCCCCTAGTAGCAAGTTCGC AGGTGCCGATATCGAGATCAGGTGGAGCAAAGCGCTGGAGAGCGTTCGCA AGGACGTCGAGTGTTTTTTCGGCATCTTGAAGGGCCGTTTTAGAATTTTG AAACTAGGAATTCTTTTCCAAAGCTTGGAAGACATCAACAACATATTCTT TACGTGTTGCACGTTGCACAACATGTTGCAAGCGTTCGATGGGCTTGATG AA
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Coding sequence (CDS) from alignment at P-littoralis_Contig608:150124..152325+

>mRNA_P-littoralis_Contig608.20.1 ID=mRNA_P-littoralis_Contig608.20.1|Name=mRNA_P-littoralis_Contig608.20.1|organism=Pylaiella littoralis U1_48|type=CDS|length=765bp|location=Sequence derived from alignment at P-littoralis_Contig608:150124..152325+ (Pylaiella littoralis U1_48)
GTCCTGGCATCGCTGCACATATTTGGGAGGGGCAACTTCTTCGAGGATAT
GACCCAGATGTCTCACATTAGCGAGCCGACGATACAAAGCACCTTTCACA
TGTTCAAGCTTTTCGCGCAAGAGTTCTACCACGACCACGTGCATCTGCCC
ACCGCCGGCGAGGACCAAGACCAGGTGATGAGGCATTACGACCTACTGGG
ATTTACTGGAGCAATCGGTTCGACTGATGTCACCCACATCAAATGGGCGG
CTTGCCCGTATTCTTGGGCGAAGCACTACACGGGAAAGGAAGGTTTCGCG
ACCATCGCCTTCCAGGCGATCGTGGATCACACTGGGCGTCTCCTGGCCGC
GACAAAGGGCTTTGGTAGCTCGATGAACGACAAGACCATCATCACGTACG
ACGCGGCCATCACTAAAATCCGCGAAGACCCGGTCTACAAGGAGAAGGAG
TACACTCTCTTCGACAAGCATGGTGAGCCGTTCCAGCGAAAGGGCAACTA
CAGCATCGTCGACAATGGGTACAACAAGTGGGAGATCCTCATCCCCCCTA
GTAGCAAGTTCGCAGGTGCCGATATCGAGATCAGGTGGAGCAAAGCGCTG
GAGAGCGTTCGCAAGGACGTCGAGTGTTTTTTCGGCATCTTGAAGGGCCG
TTTTAGAATTTTGAAACTAGGAATTCTTTTCCAAAGCTTGGAAGACATCA
ACAACATATTCTTTACGTGTTGCACGTTGCACAACATGTTGCAAGCGTTC
GATGGGCTTGATGAA
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