mRNA_P-littoralis_Contig604.43.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig604.43.1 vs. uniprot
Match: A0A6H5KBL6_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KBL6_9PHAE) HSP 1 Score: 91.3 bits (225), Expect = 2.030e-15 Identity = 74/222 (33.33%), Postives = 121/222 (54.50%), Query Frame = 1
Query: 967 RKKNIFTGDFVLFRTVSEAFMASVGLAKTLERTDYP---LRIMHGPPRRALVDDYGEEAVVASERALDDLMEATAGANFQAKVLAAGSVEEAWTEALNFNLLVSKPEQDDLAKQLEDLRQGDGEDPKLNFLKVDEILSQLRAV-GVYKRDDEILEILRLNLSYEFEIEKRGRLTQPGMTRSQLENIVRSAHADRRFKWENGTASNYHASSNALHPHALRVDG 1620
RK ++ G+F LF+T+ E F+ L TL + P + ++H R +GE+ V E A ++LM AT GANFQAK+ G+V AW A F L +S ++ + L ++R E+ + F++ D++LS + A+ G D E+L ILR +LS +++ K ++ +TR++LE++VRS R + + G +S A++ PHALR G
Sbjct: 475 RKPPVYDGNFPLFKTLFETFLTREDLGHTLAKPASPDQRIWLIHAS-RSENFRFHGEQRVRDHECAWENLMRATKGANFQAKIPEVGTVYGAWEAAQQFCLPMSDNLKEAMKLSLTNMRMQFREEARDYFIRFDKVLSTMGALDGDGISDQEVLAILRRSLSADYDQLKPVLMSDRSLTRAELESLVRS----HRVEQDLGNSS-LRAAAPTSDPHALRFGG 690
BLAST of mRNA_P-littoralis_Contig604.43.1 vs. uniprot
Match: A0A6H5JFE5_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JFE5_9PHAE) HSP 1 Score: 89.0 bits (219), Expect = 1.030e-14 Identity = 62/191 (32.46%), Postives = 102/191 (53.40%), Query Frame = 1
Query: 1060 RTDYPLRIMHGPPRRALVDDYGEEAVVASERALDDLMEATAGANFQAKVLAAGSVEEAWTEALNFNLLVSKPEQDDLAKQLEDLRQGDGEDPKLNFLKVDEILSQLRAVGVYKRDDEILEILRLNLSYEFEIEKRGRLTQPGMTRSQLENIVRSAHADRRFKW--ENGTASNYHASSNALHPHALRVDGGF 1626
R P L YG + VV +R ++EA GA F+ + + SV EAW ++ L + L +L+ + D EDPKL F +V ++ ++LRAVG+ K D E+++IL L +++EKR L++ +TR++L+++VR +A + E G+A++ A S ++PHAL V GF
Sbjct: 46 RVHLPAAAQEATDEGYLTRQYGAQLVVEHKRTWSFILEAAVGAPFENNLYSCHSVAEAWRMMEDWFLPSHPGDCQLLVAELDSITMSDDEDPKLFFSRVAQLETKLRAVGIAKSDQEVVQILVRQLPARYDVEKRTSLSKRDLTRAELQDVVRGRYATLKASEMRERGSAASTPAVS--VNPHALVVGRGF 234
BLAST of mRNA_P-littoralis_Contig604.43.1 vs. uniprot
Match: A0A6H5JBS7_9PHAE (CCHC-type domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBS7_9PHAE) HSP 1 Score: 87.8 bits (216), Expect = 2.040e-14 Identity = 60/175 (34.29%), Postives = 100/175 (57.14%), Query Frame = 1
Query: 1108 LVDDYGEEAVVASERALDDLMEATAGANFQAKVLAAGSVEEAWTEALNFNLLVSKPEQDDLAKQLEDLRQGDGEDPKLNFLKVDEILSQLRAVGVYKRDDEILEILRLNLSYEFEIEKRGRLTQPGMTRSQLENIVRSAHADRRFKW--ENGTASNYHASSNALHPHALRVDGGF 1626
L YG + VV +R ++EA GA F+ + + SV EAW ++ L + L +L+++ D EDPKL F +V ++ ++LRAVG+ K D E+++IL L +++EKR L++ +TR++L+++VR +A + E G+A+ A S ++PHAL V GF
Sbjct: 77 LTRQYGAQLVVEHKRTWSFILEAAVGAPFENNLYSCHSVAEAWRMMEDWYLPNHPADCQLLVAELDNITMSDDEDPKLFFSRVAQLETKLRAVGIAKSDQEVVQILVRQLPARYDVEKRTSLSKRDLTRAELQDVVRGRYATLKASEMRERGSAALTPAVS--VNPHALVVGRGF 249
BLAST of mRNA_P-littoralis_Contig604.43.1 vs. uniprot
Match: A0A6H5JU47_9PHAE (CCHC-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JU47_9PHAE) HSP 1 Score: 86.7 bits (213), Expect = 2.940e-14 Identity = 59/175 (33.71%), Postives = 100/175 (57.14%), Query Frame = 1
Query: 1108 LVDDYGEEAVVASERALDDLMEATAGANFQAKVLAAGSVEEAWTEALNFNLLVSKPEQDDLAKQLEDLRQGDGEDPKLNFLKVDEILSQLRAVGVYKRDDEILEILRLNLSYEFEIEKRGRLTQPGMTRSQLENIVRSAHADRRFKW--ENGTASNYHASSNALHPHALRVDGGF 1626
L YG + VV +R ++EA GA F+ + + SV EAW ++ L + L +L+++ D EDPKL F +V ++ ++LRAVG+ K D E+++IL L +++EKR L++ +TR++L+++VR +A + E G+A++ A S ++PHAL V F
Sbjct: 77 LTRQYGAQLVVEHKRTWSFILEAAVGAPFENNLYSCHSVAEAWRMMEDWYLPNHPADCQLLVAELDNITMSDDEDPKLFFSRVAQLETKLRAVGIAKSDQEVVQILVRQLPARYDVEKRTSLSKRDLTRAELQDVVRGRYATLKASEMRERGSAASTPAVS--VNPHALVVGRDF 249
BLAST of mRNA_P-littoralis_Contig604.43.1 vs. uniprot
Match: A0A6H5K2K1_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K2K1_9PHAE) HSP 1 Score: 87.8 bits (216), Expect = 3.130e-14 Identity = 60/175 (34.29%), Postives = 100/175 (57.14%), Query Frame = 1
Query: 1108 LVDDYGEEAVVASERALDDLMEATAGANFQAKVLAAGSVEEAWTEALNFNLLVSKPEQDDLAKQLEDLRQGDGEDPKLNFLKVDEILSQLRAVGVYKRDDEILEILRLNLSYEFEIEKRGRLTQPGMTRSQLENIVRSAHADRRFKW--ENGTASNYHASSNALHPHALRVDGGF 1626
L YG + VV +R ++EA GA F+ + + SV EAW ++ L + L +L+++ D EDPKL F +V ++ ++LRAVG+ K D E+++IL L +++EKR L++ +TR++L+++VR +A + E G+A+ A S ++PHAL V GF
Sbjct: 149 LTRQYGAQLVVEHKRTWSFILEAAVGAPFENNLYSCHSVAEAWRMMEDWYLPNHPADCQLLVAELDNITMSDDEDPKLFFSRVAQLETKLRAVGIAKSDQEVVQILVRQLPARYDVEKRTSLSKRDLTRAELQDVVRGRYATLKASEMRERGSAALTPAVS--VNPHALVVGRGF 321
BLAST of mRNA_P-littoralis_Contig604.43.1 vs. uniprot
Match: A0A6H5L646_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L646_9PHAE) HSP 1 Score: 87.0 bits (214), Expect = 4.370e-14 Identity = 60/175 (34.29%), Postives = 99/175 (56.57%), Query Frame = 1
Query: 1108 LVDDYGEEAVVASERALDDLMEATAGANFQAKVLAAGSVEEAWTEALNFNLLVSKPEQDDLAKQLEDLRQGDGEDPKLNFLKVDEILSQLRAVGVYKRDDEILEILRLNLSYEFEIEKRGRLTQPGMTRSQLENIVRSAHADRRFKW--ENGTASNYHASSNALHPHALRVDGGF 1626
L YG + VV +R ++EA GA F+ + + SV EAW ++ L + L +LE++ D EDPKL F +V ++ ++LRA G+ K + E+++IL L F++EKR L++ +TR++L+++VR +A + E G+A+ A S ++PHAL V GF
Sbjct: 149 LTRQYGAQLVVEHKRTWSFILEAAVGAPFENNLYSCHSVAEAWRMMEDWYLPNHPADCQLLVAELENITMSDDEDPKLFFSRVAQLETKLRAAGIAKSEQEVVQILVRQLPARFDVEKRTSLSKRDLTRAELQDVVRGRYATLKASEMRERGSAALTPAVS--VNPHALVVGRGF 321
BLAST of mRNA_P-littoralis_Contig604.43.1 vs. uniprot
Match: A0A6H5JVD9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JVD9_9PHAE) HSP 1 Score: 87.0 bits (214), Expect = 5.080e-14 Identity = 59/175 (33.71%), Postives = 100/175 (57.14%), Query Frame = 1
Query: 1108 LVDDYGEEAVVASERALDDLMEATAGANFQAKVLAAGSVEEAWTEALNFNLLVSKPEQDDLAKQLEDLRQGDGEDPKLNFLKVDEILSQLRAVGVYKRDDEILEILRLNLSYEFEIEKRGRLTQPGMTRSQLENIVRSAHADRRFKW--ENGTASNYHASSNALHPHALRVDGGF 1626
L+ YG + VV +R ++EA GA F+ + + SV EAW ++ L + L +L+D+ D E+PKL F +V ++ ++LRAVG+ K D E+++IL +++EKR L++ +TR++L+++VR +A + E G+A+ A S ++PHAL V GF
Sbjct: 149 LIRQYGAQLVVEHKRTWSFILEAAVGAPFENNLYSCHSVAEAWRMMEDWYLPNHPADCQLLVAELDDITMSDDENPKLFFSRVAQLETKLRAVGIAKSDQEVVQILVRQYPARYDVEKRTSLSKRDLTRAELQDVVRGRYATLKASEMRERGSAALTPAVS--VNPHALVVGRGF 321
BLAST of mRNA_P-littoralis_Contig604.43.1 vs. uniprot
Match: A0A6H5JN41_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JN41_9PHAE) HSP 1 Score: 86.7 bits (213), Expect = 6.000e-14 Identity = 56/173 (32.37%), Postives = 95/173 (54.91%), Query Frame = 1
Query: 1108 LVDDYGEEAVVASERALDDLMEATAGANFQAKVLAAGSVEEAWTEALNFNLLVSKPEQDDLAKQLEDLRQGDGEDPKLNFLKVDEILSQLRAVGVYKRDDEILEILRLNLSYEFEIEKRGRLTQPGMTRSQLENIVRSAHADRRFKWENGTASNYHASSNALHPHALRVDGGF 1626
L YG + VV +R ++EA GA F+ + + SV EAW ++ L + L +L+++ D EDPKL F +V ++ ++LRAVG+ K D E+++IL L +++EKR L++ +TR++L+++VR +A + S + ++PHAL V GF
Sbjct: 149 LTRQYGAQLVVEHKRTWSFILEAAVGAPFENNLYSCHSVAEAWRMMEDWYLPNHPADCQLLVAELDNITMSDDEDPKLFFSRVAQLETKLRAVGIAKSDQEVVQILVRQLPARYDVEKRTSLSKRDLTRAELQDVVRGRYATLKASEMRERGSVASTPAVFVNPHALVVGRGF 321
BLAST of mRNA_P-littoralis_Contig604.43.1 vs. uniprot
Match: A0A6H5K4K8_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K4K8_9PHAE) HSP 1 Score: 80.1 bits (196), Expect = 2.020e-13 Identity = 45/133 (33.83%), Postives = 83/133 (62.41%), Query Frame = 1
Query: 1165 LMEATAGANFQAKVLAAGSVEEAWTEALNFNLLVSKPEQDDLAKQLEDLRQGDGEDPKLNFLKVDEILSQLRAVGVYKRDDEILEILRLNLSYEFEIEKRGRLTQPGMTRSQLENIVRSAHADRRFKWENGTA 1563
++EAT G + + ++ A V EAW+ + L E+ L ++LE + GEDPKL F +VD +++ ++AVG+ K + I+ I+ L++E++IE++ L P ++R+++EN+VR+A+A++ E G A
Sbjct: 1 MLEATCGTDIEERLGACDCVPEAWSVIHEWLLPTLDAEKTLLVRRLETIEMHPGEDPKLFFARVDGVINIMKAVGIEKSERAIVHIIVRQLAHEYDIERKSILVDPTISRAKVENVVRTAYANKVMMKELGKA 133
BLAST of mRNA_P-littoralis_Contig604.43.1 vs. uniprot
Match: A0A6H5K6G7_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K6G7_9PHAE) HSP 1 Score: 78.2 bits (191), Expect = 3.100e-11 Identity = 57/176 (32.39%), Postives = 96/176 (54.55%), Query Frame = 1
Query: 1105 ALVDDYGEEAVVASERALDDLMEATAGANFQAKVLAAGSVEEAWTEALNFNLLVSKPEQDDLAKQLEDLRQGDGEDPKLNFLKVDEILSQLRAVGVYKRDDEILEILRLNLSYEFEIEKRGRLTQPGMTRSQLENIVRSAHADRRFKW--ENGTASNYHASSNALHPHALRVDGGF 1626
+L YG + V +R ++E GA F+ + + SV EAW ++ L + L +L ++ D EDPKL F +V ++ ++LRAVG+ K + E+++IL L +++EKR L++ +TR++L+++VR +A + E G+A+ A S PHAL V GF
Sbjct: 202 SLTRRYGAQLDVEHKRTWSFILETAVGAPFENNLYSCHSVAEAWRMMEDWFLPHHPADCQLLVAELANVTMNDDEDPKLFFSRVAQLETKLRAVGIAKSEQEVVQILVRQLPARYDVEKRTSLSKRYLTRAELQDVVRGRYATLKASEMRERGSAAATPAVS--ARPHALVVGRGF 375 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig604.43.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 15
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig604.43.1 >prot_P-littoralis_Contig604.43.1 ID=prot_P-littoralis_Contig604.43.1|Name=mRNA_P-littoralis_Contig604.43.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=236bp MASVGLAKTLERTDYPLRIMHGPPRRALVDDYGEEAVVASERALDDLMEAback to top mRNA from alignment at P-littoralis_Contig604:161622..163355+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig604.43.1 ID=mRNA_P-littoralis_Contig604.43.1|Name=mRNA_P-littoralis_Contig604.43.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=1734bp|location=Sequence derived from alignment at P-littoralis_Contig604:161622..163355+ (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig604:161622..163355+ >mRNA_P-littoralis_Contig604.43.1 ID=mRNA_P-littoralis_Contig604.43.1|Name=mRNA_P-littoralis_Contig604.43.1|organism=Pylaiella littoralis U1_48|type=CDS|length=708bp|location=Sequence derived from alignment at P-littoralis_Contig604:161622..163355+ (Pylaiella littoralis U1_48)back to top |